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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g21801 |
| pyrus_communis | pycom08g10520 |
| rosa_chinensis | RchiOBHm_Chr5g0032441 |
| rosa_laevigata | RLG00000000948 RLG00000001286 RLG00000011423 RLG00000013517 RLG00000014693 RLG00000029764 RLG00000030233 RLG00000030281 RLG00000030404 RLG00000033352 RLG00000033724 RLG00000034240 |
| rosa_roxburghii | Rroxscaffold_2G00123000 Rroxscaffold_3G00225730 Rroxscaffold_3G00231950 Rroxscaffold_3G00235450 Rroxscaffold_3G00248940 Rroxscaffold_3G00249200 Rroxscaffold_7G00198320 Rroxscaffold_7G00210420 |
| rosa_rugosa | Rorug02G0651800 Rorug05G0579900 |
| rosa_samantha | Rh2AG373900 Rh2BG230600 Rh3DG123800 Rh4CG126700 Rh5AG260900 Rh5CG223800 Rh5DG409000 Rh6CG161600 Rh6DG153100 Rh7CG397400 Rh7CG433700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 118, 166 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 98 |
| AgsI | TTSAA | 2 cut(s) | 206, 221 |
| Alw21I | GWGCWC | 1 cut(s) | 61 |
| Alw26I | GTCTC | 1 cut(s) | 135 |
| AoxI | GGCC | 2 cut(s) | 11, 258 |
| AspS9I | GGNCC | 1 cut(s) | 258 |
| AsuHPI | GGTGA | 1 cut(s) | 81 |
| Bbv12I | GWGCWC | 1 cut(s) | 61 |
| BccI | CCATC | 2 cut(s) | 226, 247 |
| BcoDI | GTCTC | 1 cut(s) | 135 |
| BfaI | CTAG | 1 cut(s) | 155 |
| BmgT120I | GGNCC | 1 cut(s) | 258 |
| BmiI | GGNNCC | 1 cut(s) | 259 |
| BpuEI | CTTGAG | 2 cut(s) | 262, 283 |
| Bsa29I | ATCGAT | 1 cut(s) | 78 |
| BsaI | GGTCTC | 1 cut(s) | 135 |
| BsaJI | CCNNGG | 1 cut(s) | 92 |
| BsaWI | WCCGGW | 1 cut(s) | 121 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 266, 296 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 98 |
| BseCI | ATCGAT | 1 cut(s) | 78 |
| BseDI | CCNNGG | 1 cut(s) | 92 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 98 |
| BseRI | GAGGAG | 2 cut(s) | 69, 280 |
| BshFI | GGCC | 2 cut(s) | 13, 260 |
| BshVI | ATCGAT | 1 cut(s) | 78 |
| BsiHKAI | GWGCWC | 1 cut(s) | 61 |
| BsiSI | CCGG | 1 cut(s) | 122 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 98 |
| BsmAI | GTCTC | 1 cut(s) | 135 |
| BsnI | GGCC | 2 cut(s) | 13, 260 |
| Bso31I | GGTCTC | 1 cut(s) | 135 |
| Bsp1286I | GDGCHC | 1 cut(s) | 61 |
| Bsp143I | GATC | 1 cut(s) | 82 |
| Bsp19I | CCATGG | 1 cut(s) | 92 |
| BspANI | GGCC | 2 cut(s) | 13, 260 |
| BspDI | ATCGAT | 1 cut(s) | 78 |
| BspLI | GGNNCC | 1 cut(s) | 259 |
| BspTNI | GGTCTC | 1 cut(s) | 135 |
| BssECI | CCNNGG | 1 cut(s) | 92 |
| BssMI | GATC | 1 cut(s) | 82 |
| BssT1I | CCWWGG | 1 cut(s) | 92 |
| Bst4CI | ACNGT | 2 cut(s) | 164, 282 |
| Bst6I | CTCTTC | 2 cut(s) | 201, 216 |
| BstC8I | GCNNGC | 1 cut(s) | 188 |
| BstDSI | CCRYGG | 1 cut(s) | 92 |
| BstKTI | GATC | 1 cut(s) | 85 |
| BstMAI | GTCTC | 1 cut(s) | 135 |
| BstMBI | GATC | 1 cut(s) | 82 |
| Bsu15I | ATCGAT | 1 cut(s) | 78 |
| BsuRI | GGCC | 2 cut(s) | 13, 260 |
| BsuTUI | ATCGAT | 1 cut(s) | 78 |
| BtgI | CCRYGG | 1 cut(s) | 92 |
| Cac8I | GCNNGC | 1 cut(s) | 188 |
| Cfr13I | GGNCC | 1 cut(s) | 258 |
| ClaI | ATCGAT | 1 cut(s) | 78 |
| CviAII | CATG | 1 cut(s) | 93 |
| CviJI | RGCY | 6 cut(s) | 13, 49, 105, 154, 260, 286 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 49, 105, 154, 260, 286 |
| DpnI | GATC | 1 cut(s) | 84 |
| DpnII | GATC | 1 cut(s) | 82 |
| Eam1104I | CTCTTC | 2 cut(s) | 201, 216 |
| EarI | CTCTTC | 2 cut(s) | 201, 216 |
| Eco130I | CCWWGG | 1 cut(s) | 92 |
| Eco147I | AGGCCT | 1 cut(s) | 13 |
| Eco31I | GGTCTC | 1 cut(s) | 135 |
| EcoO109I | RGGNCCY | 1 cut(s) | 258 |
| EcoT14I | CCWWGG | 1 cut(s) | 92 |
| ErhI | CCWWGG | 1 cut(s) | 92 |
| FaeI | CATG | 1 cut(s) | 96 |
| FaiI | YATR | 4 cut(s) | 72, 94, 130, 184 |
| FatI | CATG | 1 cut(s) | 92 |
| FblI | GTMKAC | 2 cut(s) | 118, 166 |
| FspBI | CTAG | 1 cut(s) | 155 |
| HaeIII | GGCC | 2 cut(s) | 13, 260 |
| HapII | CCGG | 1 cut(s) | 122 |
| Hin1II | CATG | 1 cut(s) | 96 |
| HpaII | CCGG | 1 cut(s) | 122 |
| HphI | GGTGA | 1 cut(s) | 81 |
| Hpy166II | GTNNAC | 2 cut(s) | 119, 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 66, 241 |
| Hpy8I | GTNNAC | 2 cut(s) | 119, 167 |
| HpyAV | CCTTC | 3 cut(s) | 34, 72, 156 |
| HpyCH4III | ACNGT | 2 cut(s) | 164, 282 |
| HpyCH4IV | ACGT | 1 cut(s) | 175 |
| HpySE526I | ACGT | 1 cut(s) | 175 |
| Hsp92II | CATG | 1 cut(s) | 96 |
| Kzo9I | GATC | 1 cut(s) | 82 |
| LmnI | GCTCC | 1 cut(s) | 56 |
| LpnPI | CCDG | 2 cut(s) | 119, 135 |
| MaeI | CTAG | 1 cut(s) | 155 |
| MaeII | ACGT | 1 cut(s) | 175 |
| MaeIII | GTNAC | 1 cut(s) | 21 |
| MalI | GATC | 1 cut(s) | 84 |
| MboI | GATC | 1 cut(s) | 82 |
| MboII | GAAGA | 2 cut(s) | 218, 233 |
| MhlI | GDGCHC | 1 cut(s) | 61 |
| MnlI | CCTC | 7 cut(s) | 47, 164, 185, 237, 258, 268, 283 |
| MspI | CCGG | 1 cut(s) | 122 |
| NcoI | CCATGG | 1 cut(s) | 92 |
| NdeII | GATC | 1 cut(s) | 82 |
| NlaIII | CATG | 1 cut(s) | 96 |
| NlaIV | GGNNCC | 1 cut(s) | 259 |
| PceI | AGGCCT | 1 cut(s) | 13 |
| PspN4I | GGNNCC | 1 cut(s) | 259 |
| PspPI | GGNCC | 1 cut(s) | 258 |
| Sau3AI | GATC | 1 cut(s) | 82 |
| Sau96I | GGNCC | 1 cut(s) | 258 |
| SduI | GDGCHC | 1 cut(s) | 61 |
| SetI | ASST | 3 cut(s) | 64, 103, 178 |
| SmlI | CTYRAG | 3 cut(s) | 241, 262, 287 |
| SmoI | CTYRAG | 3 cut(s) | 241, 262, 287 |
| SseBI | AGGCCT | 1 cut(s) | 13 |
| SspMI | CTAG | 1 cut(s) | 155 |
| StuI | AGGCCT | 1 cut(s) | 13 |
| StyI | CCWWGG | 1 cut(s) | 92 |
| TaaI | ACNGT | 2 cut(s) | 164, 282 |
| TaiI | ACGT | 1 cut(s) | 178 |
| TaqI | TCGA | 1 cut(s) | 78 |
| TaqII | GACCGA | 1 cut(s) | 104 |
| XmiI | GTMKAC | 2 cut(s) | 118, 166 |
| XspI | CTAG | 1 cut(s) | 155 |