Rh5CG223800

Sterol 3-beta-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003472
Physical Location & Seq
Forward (+)
22778938 .. 22782453
3516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG223800.1

Sequence Viewer

Length: 324 bp
ATGGCAGATGTCATCATTAGCAGATTAGAGAAGATATTATTTCCAGGGCTTAAGTCATCCATCGTTTTTAAGGAGAGCTTACGTTGTCACTTGGCTGAGAAGAATGTTTTCTATCTTCCAATTTCATCACCACCTGTTCTCTCTATCCATCCGAAACATGATAATACAGGCTCTGTAGAGTTGCCTCTTTCGCTGCAGAAAAAGTTGTTTTCTGGAGAACATACAAAAGAATGTCTTTCGGTAGTTGAAACGATATTTGGATCAGGCCCAAGCATGGATGGTGATTTCATTATGATAAATTTCTTTGCTCTGATATCAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

107

Amino Acids

11.8

Weight (kDa)

6.4

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 268
AcsI RAATTY 1 cut(s) 298
AfiI CCNNNNNNNGG 1 cut(s) 274
AflII CTTAAG 1 cut(s) 50
AgsI TTSAA 1 cut(s) 248
AjnI CCWGG 1 cut(s) 43
AjuI GAANNNNNNNTTGG 2 cut(s) 240, 272
AluBI AGCT 2 cut(s) 78, 320
AluI AGCT 2 cut(s) 78, 320
AlwI GGATC 1 cut(s) 268
AlwNI CAGNNNCTG 1 cut(s) 173
AoxI GGCC 1 cut(s) 265
ApeKI GCWGC 1 cut(s) 193
ApoI RAATTY 1 cut(s) 298
Asp700I GAANNNNTTC 1 cut(s) 107
AspS9I GGNCC 1 cut(s) 266
AsuHPI GGTGA 2 cut(s) 120, 293
BbvI GCAGC 1 cut(s) 180
BccI CCATC 3 cut(s) 68, 156, 272
BciT130I CCWGG 1 cut(s) 45
BfmI CTRYAG 2 cut(s) 174, 194
BfrI CTTAAG 1 cut(s) 50
BisI GCNGC 1 cut(s) 194
BlsI GCNGC 1 cut(s) 195
Bme1390I CCNGG 1 cut(s) 45
BmgT120I GGNCC 1 cut(s) 266
BmrFI CCNGG 1 cut(s) 45
BpmI CTGGAG 1 cut(s) 234
BsaJI CCNNGG 1 cut(s) 44
Bsc4I CCNNNNNNNGG 1 cut(s) 274
BseBI CCWGG 1 cut(s) 45
BseDI CCNNGG 1 cut(s) 44
BseGI GGATG 3 cut(s) 56, 148, 283
BseLI CCNNNNNNNGG 1 cut(s) 274
BseMII CTCAG 1 cut(s) 87
BseXI GCAGC 1 cut(s) 180
BshFI GGCC 1 cut(s) 267
BslI CCNNNNNNNGG 1 cut(s) 274
BsnI GGCC 1 cut(s) 267
Bsp143I GATC 1 cut(s) 260
BspANI GGCC 1 cut(s) 267
BspCNI CTCAG 1 cut(s) 88
BspMAI CTGCAG 1 cut(s) 198
BspPI GGATC 1 cut(s) 268
BspTI CTTAAG 1 cut(s) 50
BssECI CCNNGG 1 cut(s) 44
BssMI GATC 1 cut(s) 260
Bst2UI CCWGG 1 cut(s) 45
BstAFI CTTAAG 1 cut(s) 50
BstDEI CTNAG 1 cut(s) 96
BstF5I GGATG 3 cut(s) 56, 148, 283
BstKTI GATC 1 cut(s) 263
BstMBI GATC 1 cut(s) 260
BstMWI GCNNNNNNNGC 1 cut(s) 190
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 1 cut(s) 43
BstSFI CTRYAG 2 cut(s) 174, 194
BstV1I GCAGC 1 cut(s) 180
BsuRI GGCC 1 cut(s) 267
BtsCI GGATG 3 cut(s) 56, 148, 283
CaiI CAGNNNCTG 1 cut(s) 173
Cfr13I GGNCC 1 cut(s) 266
CviAII CATG 2 cut(s) 158, 274
CviJI RGCY 6 cut(s) 49, 78, 95, 171, 267, 320
CviKI_1 RGCY 6 cut(s) 49, 78, 95, 171, 267, 320
DdeI CTNAG 1 cut(s) 96
DpnI GATC 1 cut(s) 262
DpnII GATC 1 cut(s) 260
Eco32I GATATC 1 cut(s) 315
EcoRII CCWGG 1 cut(s) 43
EcoRV GATATC 1 cut(s) 315
FaeI CATG 2 cut(s) 161, 277
FaiI YATR 4 cut(s) 159, 222, 275, 293
FalI AAGNNNNNCTT 4 cut(s) 62, 94, 219, 251
FatI CATG 2 cut(s) 157, 273
Fnu4HI GCNGC 1 cut(s) 194
FokI GGATG 3 cut(s) 43, 135, 290
Fsp4HI GCNGC 1 cut(s) 194
GluI GCNGC 1 cut(s) 194
GsuI CTGGAG 1 cut(s) 234
HaeIII GGCC 1 cut(s) 267
Hin1II CATG 2 cut(s) 161, 277
HphI GGTGA 2 cut(s) 120, 293
Hpy188I TCNGA 2 cut(s) 153, 312
Hpy188III TCNNGA 1 cut(s) 213
HpyCH4IV ACGT 1 cut(s) 82
HpyCH4V TGCA 1 cut(s) 196
HpyF10VI GCNNNNNNNGC 1 cut(s) 190
HpyF3I CTNAG 1 cut(s) 96
HpySE526I ACGT 1 cut(s) 82
Hsp92II CATG 2 cut(s) 161, 277
Kzo9I GATC 1 cut(s) 260
LpnPI CCDG 6 cut(s) 30, 57, 147, 153, 198, 249
Lsp1109I GCAGC 1 cut(s) 180
MaeII ACGT 1 cut(s) 82
MaeIII GTNAC 1 cut(s) 86
MalI GATC 1 cut(s) 262
MboI GATC 1 cut(s) 260
MboII GAAGA 3 cut(s) 43, 107, 112
MluCI AATT 2 cut(s) 120, 298
MnlI CCTC 1 cut(s) 195
MroXI GAANNNNTTC 1 cut(s) 107
MseI TTAA 3 cut(s) 51, 69, 322
MspCI CTTAAG 1 cut(s) 50
MspR9I CCNGG 1 cut(s) 45
MvaI CCWGG 1 cut(s) 45
MwoI GCNNNNNNNGC 1 cut(s) 190
NdeII GATC 1 cut(s) 260
NlaIII CATG 2 cut(s) 161, 277
NmuCI GTSAC 1 cut(s) 86
PdmI GAANNNNTTC 1 cut(s) 107
PkrI GCNGC 1 cut(s) 195
Psp6I CCWGG 1 cut(s) 43
PspGI CCWGG 1 cut(s) 43
PspPI GGNCC 1 cut(s) 266
PstI CTGCAG 1 cut(s) 198
PstNI CAGNNNCTG 1 cut(s) 173
SaqAI TTAA 3 cut(s) 51, 69, 322
SatI GCNGC 1 cut(s) 194
Sau3AI GATC 1 cut(s) 260
Sau96I GGNCC 1 cut(s) 266
ScrFI CCNGG 1 cut(s) 45
SetI ASST 4 cut(s) 80, 85, 136, 322
SfcI CTRYAG 2 cut(s) 174, 194
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
Sse9I AATT 2 cut(s) 120, 298
StyD4I CCNGG 1 cut(s) 43
TaiI ACGT 1 cut(s) 85
TasI AATT 2 cut(s) 120, 298
Tru1I TTAA 3 cut(s) 51, 69, 322
Tru9I TTAA 3 cut(s) 51, 69, 322
TseFI GTSAC 1 cut(s) 86
TseI GCWGC 1 cut(s) 193
Tsp45I GTSAC 1 cut(s) 86
TspDTI ATGAA 2 cut(s) 114, 277
Vha464I CTTAAG 1 cut(s) 50
XapI RAATTY 1 cut(s) 298
XmnI GAANNNNTTC 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.