Rh5AG260900

Sterol 3-beta-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0003472
Physical Location & Seq
Forward (+)
34067296 .. 34069563
2268 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG260900.1

Sequence Viewer

Length: 438 bp
ATGGACATTCTGGGCGGCTCTGAAGATGGGGACGGATTGGACCTTGAGGGCCAGTTGGTCACGGTCTATCTGGGAAGCAAAGAGATCGAGGTGGAGGAGGTATTGGTTTCTGGGGTGAGCTTACGTTGTCACTTGGCTGAGAAGAATGTTTCCTATCTTCCAATTTCATCACCACCTGTTCTCTCTATCCATCAGAAACATGATACTACAGGCTCTGTAGAGTTGCCTCTTTCGCTGCAGAAAAAGTTGTTTTCTGGAGAACATACAAAAGAATGTCTTTCGGCAGTTGAAACGATATTTGGATCAGGCCCAAGCATGGATGGTGATTTCATTGTGATAAATTTCTTTGCTCTGGTACTTTCCTTTGTAATTTTTATTATATTTTTTGAATTTGAATCAAAGTTATCCCTTCCATGGATTGATACGTTAGTGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

145

Amino Acids

15.85

Weight (kDa)

4.43

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 15
AclWI GGATC 1 cut(s) 310
AcsI RAATTY 2 cut(s) 340, 389
AcuI CTGAAG 1 cut(s) 42
AfaI GTAC 1 cut(s) 357
AfiI CCNNNNNNNGG 2 cut(s) 316, 414
AgsI TTSAA 3 cut(s) 290, 389, 395
AjuI GAANNNNNNNTTGG 2 cut(s) 282, 314
AluBI AGCT 1 cut(s) 120
AluI AGCT 1 cut(s) 120
AlwI GGATC 1 cut(s) 310
AlwNI CAGNNNCTG 1 cut(s) 215
AoxI GGCC 2 cut(s) 49, 307
ApeKI GCWGC 1 cut(s) 235
ApoI RAATTY 2 cut(s) 340, 389
AspS9I GGNCC 3 cut(s) 40, 49, 308
AsuHPI GGTGA 3 cut(s) 127, 162, 335
AvaII GGWCC 1 cut(s) 40
BaeI ACNNNNGTAYC 1 cut(s) 414
BbvI GCAGC 1 cut(s) 222
BccI CCATC 3 cut(s) 20, 198, 314
BcgI CGANNNNNNTGC 2 cut(s) 67, 101
BfmI CTRYAG 3 cut(s) 207, 216, 236
BisI GCNGC 2 cut(s) 16, 236
BlsI GCNGC 2 cut(s) 17, 237
Bme18I GGWCC 1 cut(s) 40
BmgT120I GGNCC 3 cut(s) 40, 49, 308
BpmI CTGGAG 1 cut(s) 276
BpuEI CTTGAG 1 cut(s) 65
BsaJI CCNNGG 1 cut(s) 413
Bsc4I CCNNNNNNNGG 2 cut(s) 316, 414
Bse1I ACTGG 1 cut(s) 52
BseDI CCNNGG 1 cut(s) 413
BseGI GGATG 1 cut(s) 325
BseLI CCNNNNNNNGG 2 cut(s) 316, 414
BseMII CTCAG 1 cut(s) 129
BseNI ACTGG 1 cut(s) 52
BseRI GAGGAG 1 cut(s) 110
BseXI GCAGC 1 cut(s) 222
BshFI GGCC 2 cut(s) 51, 309
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 2 cut(s) 316, 414
BsmFI GGGAC 1 cut(s) 44
BsnI GGCC 2 cut(s) 51, 309
Bsp143I GATC 2 cut(s) 84, 302
Bsp19I CCATGG 1 cut(s) 413
BspACI CCGC 1 cut(s) 15
BspANI GGCC 2 cut(s) 51, 309
BspCNI CTCAG 1 cut(s) 130
BspMAI CTGCAG 1 cut(s) 240
BspPI GGATC 1 cut(s) 310
BsrI ACTGG 1 cut(s) 52
BssECI CCNNGG 1 cut(s) 413
BssMI GATC 2 cut(s) 84, 302
BssT1I CCWWGG 1 cut(s) 413
Bst4CI ACNGT 1 cut(s) 64
BstDEI CTNAG 1 cut(s) 138
BstDSI CCRYGG 1 cut(s) 413
BstF5I GGATG 1 cut(s) 325
BstKTI GATC 2 cut(s) 87, 305
BstMBI GATC 2 cut(s) 84, 302
BstMWI GCNNNNNNNGC 1 cut(s) 232
BstSFI CTRYAG 3 cut(s) 207, 216, 236
BstV1I GCAGC 1 cut(s) 222
BsuRI GGCC 2 cut(s) 51, 309
BtgI CCRYGG 1 cut(s) 413
BtsCI GGATG 1 cut(s) 325
CaiI CAGNNNCTG 1 cut(s) 215
Cfr13I GGNCC 3 cut(s) 40, 49, 308
Csp6I GTAC 1 cut(s) 356
CviAII CATG 3 cut(s) 200, 316, 414
CviJI RGCY 6 cut(s) 18, 51, 120, 137, 213, 309
CviKI_1 RGCY 6 cut(s) 18, 51, 120, 137, 213, 309
CviQI GTAC 1 cut(s) 356
DdeI CTNAG 1 cut(s) 138
DpnI GATC 2 cut(s) 86, 304
DpnII GATC 2 cut(s) 84, 302
Eco130I CCWWGG 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 40
Eco57I CTGAAG 1 cut(s) 42
EcoT14I CCWWGG 1 cut(s) 413
ErhI CCWWGG 1 cut(s) 413
FaeI CATG 3 cut(s) 203, 319, 417
FaiI YATR 6 cut(s) 201, 264, 317, 380, 415, 436
FalI AAGNNNNNCTT 2 cut(s) 261, 293
FaqI GGGAC 1 cut(s) 44
FatI CATG 3 cut(s) 199, 315, 413
Fnu4HI GCNGC 2 cut(s) 16, 236
FokI GGATG 1 cut(s) 332
Fsp4HI GCNGC 2 cut(s) 16, 236
GluI GCNGC 2 cut(s) 16, 236
GsuI CTGGAG 1 cut(s) 276
HaeIII GGCC 2 cut(s) 51, 309
Hin1II CATG 3 cut(s) 203, 319, 417
HinfI GANTC 1 cut(s) 395
HphI GGTGA 3 cut(s) 127, 162, 335
Hpy188I TCNGA 2 cut(s) 22, 195
Hpy188III TCNNGA 1 cut(s) 255
HpyAV CCTTC 1 cut(s) 419
HpyCH4III ACNGT 1 cut(s) 64
HpyCH4IV ACGT 2 cut(s) 124, 425
HpyCH4V TGCA 1 cut(s) 238
HpyF10VI GCNNNNNNNGC 1 cut(s) 232
HpyF3I CTNAG 1 cut(s) 138
HpySE526I ACGT 2 cut(s) 124, 425
Hsp92II CATG 3 cut(s) 203, 319, 417
Kzo9I GATC 2 cut(s) 84, 302
LpnPI CCDG 8 cut(s) 56, 65, 96, 189, 195, 240, 291, 338
Lsp1109I GCAGC 1 cut(s) 222
MaeII ACGT 2 cut(s) 124, 425
MaeIII GTNAC 3 cut(s) 58, 128, 430
MalI GATC 2 cut(s) 86, 304
MboI GATC 2 cut(s) 84, 302
MboII GAAGA 3 cut(s) 35, 149, 154
MluCI AATT 4 cut(s) 162, 340, 369, 389
MnlI CCTC 5 cut(s) 40, 82, 88, 91, 237
MwoI GCNNNNNNNGC 1 cut(s) 232
NcoI CCATGG 1 cut(s) 413
NdeII GATC 2 cut(s) 84, 302
NlaIII CATG 3 cut(s) 203, 319, 417
NmuCI GTSAC 3 cut(s) 58, 128, 430
PfeI GAWTC 1 cut(s) 395
PkrI GCNGC 2 cut(s) 17, 237
PspPI GGNCC 3 cut(s) 40, 49, 308
PstI CTGCAG 1 cut(s) 240
PstNI CAGNNNCTG 1 cut(s) 215
RsaI GTAC 1 cut(s) 357
RsaNI GTAC 1 cut(s) 356
SatI GCNGC 2 cut(s) 16, 236
Sau3AI GATC 2 cut(s) 84, 302
Sau96I GGNCC 3 cut(s) 40, 49, 308
SetI ASST 7 cut(s) 45, 93, 102, 122, 127, 178, 428
SfcI CTRYAG 3 cut(s) 207, 216, 236
SinI GGWCC 1 cut(s) 40
SmlI CTYRAG 1 cut(s) 44
SmoI CTYRAG 1 cut(s) 44
Sse9I AATT 4 cut(s) 162, 340, 369, 389
SsiI CCGC 1 cut(s) 15
StyI CCWWGG 1 cut(s) 413
TaaI ACNGT 1 cut(s) 64
TaiI ACGT 2 cut(s) 127, 428
TaqI TCGA 1 cut(s) 87
TasI AATT 4 cut(s) 162, 340, 369, 389
TauI GCSGC 1 cut(s) 18
TfiI GAWTC 1 cut(s) 395
TseFI GTSAC 3 cut(s) 58, 128, 430
TseI GCWGC 1 cut(s) 235
Tsp45I GTSAC 3 cut(s) 58, 128, 430
TspDTI ATGAA 2 cut(s) 156, 319
TspGWI ACGGA 1 cut(s) 48
VpaK11BI GGWCC 1 cut(s) 40
XapI RAATTY 2 cut(s) 340, 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.