Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001061

Physical Location & Seq

Genomic Coordinates Forward (+)

33537780 .. 33545526

Gene Structure 7747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g43291.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2823 bp

ATGGAGACCTTCTTGACCGATATATGCAAGGGAAGAACACTGCTTACATTGATCTTGTGTATTTGGGTGCCCATGGAAGTGATGGCTCAGGCTAGAAATGCCACCGTCTCCTCTAAGAGGCCGAGTTCTCTGAACTTTGGGGCTCTGTTTACTTTCAATTCAGCCATTGGAAGATCGGCCAAACCAGCAATCCTAGCCGCAATTGATGAAGTAAATTCTGATTCAAGTGTTCTCAAGGGGACTAAATTGAAGATTATTTTCCATGATACAAATTGCAGTGGATTTCTTGGAACTGTGGAAGCTTTGCAGCTGATTGAAAATGATGTAGTTGTTGCAATCGGCCCGCAATCCTCTGGAATATCTCACGTCATATCCCACGTTGTTAATGAGCTCCGTGTACCACTTTTGTCATTTGGAGCAACAGATCCCTCCCTTTCTGCTCTACAATACCCGTATTTTGTTCGCACCACACAGAGTGACTATTTTCAAATGTATGCAATTGCTGATATGGTTGAGTACTTTGGATGGAGAGAAGTAATTGCTATTTTTGTAGATGATGATTATGGCAGAAATGGGATTTCTGTTCTAGGTGATGCCTTGGCGAAGAAGCGTTCCAAGATTGCTTACAAGGCTGCCTTCTCTCCTGGGGCCCCCTTAAGCGATATCAATGACTTGTTGGTGGGAGTAAACCTCTTGGAATCTCGAGTTTATATTGTACATGTAAATCCTGACTCTGGTTTGTCAATCTTCTCTGTTGCCAAGGATCTTGGAATGATGACCAGTGGCTATGTTTGGATTGCAACAGATTGGCTTCCTACTCATTTAGATTCTCTAGTACCACCTGACCCCGACAAAATGAATCTTTTACAAGGAGTTGTTGCTGTTCGTCATCATACCCCGGATACTGATCTCAAAAAAAGTTTTGCATCTAAATGGAACAAACTAAAACATGAAGGGAGTCCAGGCTTCAATTCTTATGCTCTCTATGCATATGACTCTGTTTGGTTAGCAGCCCGTGCCCTTGATGTTTTTCTCAATGACGGAGGGACTGTATCTTTCTCTAATGACCCAAAGTTGAAAGATACAAATACAAGTGCACTGCACTTATCATCACTCCGAATATTTGATGAAGGCCAACATTACTTGCAGACAATTCTTAAGATGAACTTCACAGGTGTAAGTGGTCAGCTTCAGTTTGATCTGGATAAGAATTTAATTCATCCAGCTTATGACATTCTGAACATTGGTGGAACTGGATTTCGTAAAATTGGTTATTGGTCAAATTCTACTAGTCTTTCAACAACTGAGCCAGAGATATTATATGAGAAGTCTTTAAATACGTCTGGCAGCACTCCACATCTTTATAGTGTTATATGGCCTGGTGAAACTATAACCACACCTCGGGGATGGGTATTTCCCAACAATGGCAAGCCACTGCGTATTGCTGTGCCTGACCGAGTAAGTTACAAAGAGTTTGTGTCTAAAGACAAGAGTCCTCCTGGGGTCAGAGGATATTGTATTGATGTATTTGAAGCTGCTATAAACTTATTGCCTTATGCTGTGCCACGCACATATGTGTTGTACGGAGGTGGCAAGAGGAATCCCCAGTATAATGATCTTGTATCCCAAGTTGCTCTAAATAACTTTGATGCAGCTGTTGGGGATGTTACAATAACTACTAATAGGACAAGAATGGTTGATTTTACACAGCCTTACATGGAGTCGGGACTAGTTGTAGTTGTTCCAGTCAAACAGGTAAAAACAGACACTTGGGCATTCCTGAAGCCATTCACTTATCAGATGTGGTTAGTCACCGGTGCATTCTTCCTTCTTGTGGGAGCCGTTGTTTGGATTCTTGAGCACAGGATTAATCACGAGTTCCGTGGTCCACCGAGGCAACAGCTCATGACTATTTTTTGGTTTAGTTTCTCAACGATGTTCTTCTCACATAGGGAGAACACAGTGAGCACTCTAGGACGGCTGGTGCTGATTATATGGTTGTTTGTGGTGTTGATTATCAATTCGAGCTATACAGCTAGTTTGACATCGATCCTCACTGTACAACAGCTGGCATCACGAATTGAAGGGATAGACAGCTTGATATCGAGTAATGATCCAATTGGAATCCAAGATGGGACATTTGCACGGAAATTTTTGGTTGATGAGCTGAACATAGCAGAGGCTAGACTTGTTACCTTAAAAACCATGGAAGACTACGGCAAAGCCCTTCAGAATGGGCCAAAACGTGGCGGAGTAGTTGCCATTGTCGATGAGCTTCCTTATATTGAGCTGTTTATGACCTCCACCAAGTGTGCATTCAGGATTGTTGGGCAGGAGTTTACAAAAAGCGGATGGGGATTTGCATTCCAAAGGGACTCTCCTCTTGCTGTTGATTTGTCAACTGCCATTCTTCAACTCTCGGAGAACGGTGACCTCCAAAAGATCCGTAATAAATGGCTTGGGAGTAGCGAGTGCTCTATGCAACCCAATGAACATGATGCAAACCGACTATCACTGACAAGCTTTTGGGGCTTGTTTCTTATATGTGGAATTGCATGCGCCATTGCTCTTGCTGTGTTTTTCTGTAGAATCTTATGTCAATACCGCAGATTTAGTCCAGAGGCCATCGAGAGGGATGTTGAGGAAATTGAACCTGCTCCCAGATCTAGTCGACGCTCACTCCGGGTAACTAGTTTCAAGGACTTGATGGATTTTGTAGATAAGAAAGAAGAAGAGATCAAGCATATGCTCAGGAGAAAGAGTAGTGATAACAAACAAGAAGCTAGCCCAAGCACTGATGGCAAGTCCCATTCACCCTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009266 GO:0009409 GO:0009507 GO:0009536 GO:0009605 GO:0009611 GO:0009612 GO:0009628 GO:0009719 GO:0009987 GO:0010033 GO:0010034 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015276 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0033554 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070417 GO:0070588 GO:0070838 GO:0070887 GO:0071214 GO:0071229 GO:0071230 GO:0071236 GO:0071260 GO:0071310 GO:0071311 GO:0071417 GO:0071495 GO:0071496 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0104004 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

941

Amino Acids

104.67

Weight (kDa)

6.55

Isoelectric Point (pI)

38.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	54 - 341	2.1e-19	Periplasmic binding protein
ANF_receptor	PF01094	61 - 417	1.9e-90	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	500 - 583	6.8e-11	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	537 - 821	1e-10	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	599 - 853	2.9e-40	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390
fragaria_vesca	FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291
malus_domestica	MD09G1069900.v1.1 MD09G1070100.v1.1 MD09G1107700.v1.1 MD09G1108100.v1.1 MD17G1096100.v1.1
prunus_persica	Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1
pyrus_communis	pycom09g03000 pycom09g03030 pycom09g03050 pycom09g03070 pycom15g20430 pycom17g09220
rosa_chinensis	RchiOBHm_Chr1g0324131 RchiOBHm_Chr2g0159571 RchiOBHm_Chr2g0159581
rosa_laevigata	RLG00000021167
rosa_multiflora	Rmu_co8397097.1_g000001 Rmu_sc0004966.1_g000017 Rmu_sc0020031.1_g000001
rosa_roxburghii	Rroxscaffold_2G00090390
rosa_rugosa	Rorug02G0476900 Rorug02G0477000 Rorug02G0477100 Rorug02G0477200
rosa_samantha	Rh2AG544200 Rh2BG557000 Rh2CG527200 Rh2DG566000
rosa_wichuraiana	Rw2G044990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2662
AccB1I	GGYRCC	1 cut(s)	67
AccB7I	CCANNNNNTGG	1 cut(s)	2246
AccI	GTMKAC	1 cut(s)	2671
AciI	CCGC	5 cut(s)	198, 344, 2250, 2349, 2605
AclWI	GGATC	5 cut(s)	419, 771, 2044, 2108, 2437
AcoI	YGGCCR	1 cut(s)	177
AcsI	RAATTY	4 cut(s)	214, 1210, 1282, 2150
AcuI	CTGAAG	3 cut(s)	1175, 1802, 2213
AdeI	CACNNNGTG	2 cut(s)	476, 2310
AfaI	GTAC	6 cut(s)	399, 518, 717, 837, 1583, 2061
AfiI	CCNNNNNNNGG	8 cut(s)	117, 734, 1401, 1424, 1834, 1848, 2246, 2631
AflII	CTTAAG	2 cut(s)	655, 1157
AflIII	ACRYGT	1 cut(s)	718
AgeI	ACCGGT	1 cut(s)	1814
AhlI	ACTAGT	3 cut(s)	1289, 1729, 2690
AjiI	CACGTC	1 cut(s)	367
AjnI	CCWGG	4 cut(s)	643, 961, 1378, 1498
AjuI	GAANNNNNNNTTGG	2 cut(s)	2300, 2332
AleI	CACNNNNGTG	1 cut(s)	1574
Alw21I	GWGCWC	5 cut(s)	393, 1099, 1863, 1970, 2477
Alw26I	GTCTC	1 cut(s)	112
Alw44I	GTGCAC	1 cut(s)	1095
AlwI	GGATC	5 cut(s)	419, 771, 2044, 2108, 2437
Ama87I	CYCGRG	2 cut(s)	702, 1401
AoxI	GGCC	8 cut(s)	119, 177, 340, 648, 1132, 1376, 2237, 2622
ApaI	GGGCCC	1 cut(s)	652
ApaLI	GTGCAC	1 cut(s)	1095
ApeKI	GCWGC	6 cut(s)	307, 632, 1010, 1347, 1535, 1652
ApoI	RAATTY	4 cut(s)	214, 1210, 1282, 2150
AseI	ATTAAT	1 cut(s)	1869
AsiGI	ACCGGT	1 cut(s)	1814
Asp700I	GAANNNNTTC	1 cut(s)	1787
AspLEI	GCGC	1 cut(s)	2561
AspS9I	GGNCC	5 cut(s)	341, 648, 649, 1886, 2237
AsuC2I	CCSGG	2 cut(s)	899, 2684
AsuHPI	GGTGA	5 cut(s)	602, 1394, 1804, 2441, 2805
AsuNHI	GCTAGC	1 cut(s)	2783
AvaI	CYCGRG	2 cut(s)	702, 1401
AvaII	GGWCC	1 cut(s)	1886
BaeGI	GKGCMC	4 cut(s)	72, 652, 1021, 1099
BanI	GGYRCC	1 cut(s)	67
BanII	GRGCYC	3 cut(s)	145, 393, 652
BauI	CACGAG	1 cut(s)	1874
BbsI	GAAGAC	1 cut(s)	2217
Bbv12I	GWGCWC	5 cut(s)	393, 1099, 1863, 1970, 2477
BbvI	GCAGC	6 cut(s)	319, 619, 1022, 1359, 1522, 1664
BccI	CCATC	8 cut(s)	76, 519, 1401, 2126, 2346, 2633, 2701, 2792
BceAI	ACGGC	3 cut(s)	1826, 1994, 2233
BciT130I	CCWGG	4 cut(s)	645, 963, 1380, 1500
BciVI	GTATCC	2 cut(s)	895, 1633
BcnI	CCSGG	2 cut(s)	899, 2684
BcoDI	GTCTC	1 cut(s)	112
BcuI	ACTAGT	3 cut(s)	1289, 1729, 2690
BfmI	CTRYAG	1 cut(s)	2584
BfrI	CTTAAG	2 cut(s)	655, 1157
BfuAI	ACCTGC	1 cut(s)	2662
BfuI	GTATCC	2 cut(s)	895, 1633
BglII	AGATCT	1 cut(s)	2663
BisI	GCNGC	7 cut(s)	198, 308, 633, 1011, 1348, 1536, 1653
BlsI	GCNGC	7 cut(s)	199, 309, 634, 1012, 1349, 1537, 1654
BmcAI	AGTACT	1 cut(s)	518
Bme1390I	CCNGG	6 cut(s)	645, 899, 963, 1380, 1500, 2684
Bme18I	GGWCC	1 cut(s)	1886
BmeT110I	CYCGRG	2 cut(s)	702, 1401
BmgBI	CACGTC	1 cut(s)	367
BmgT120I	GGNCC	5 cut(s)	341, 648, 649, 1886, 2237
BmiI	GGNNCC	5 cut(s)	69, 649, 650, 651, 1840
BmrFI	CCNGG	6 cut(s)	645, 899, 963, 1380, 1500, 2684
BmrI	ACTGGG	1 cut(s)	1600
BmsI	GCATC	5 cut(s)	583, 935, 1639, 2081, 2488
BmtI	GCTAGC	1 cut(s)	2787
BmuI	ACTGGG	1 cut(s)	1600
BoxI	GACNNNNGTC	1 cut(s)	1491
BpiI	GAAGAC	1 cut(s)	2217
BplI	GAGNNNNNCTC	2 cut(s)	675, 707
Bpu10I	CCTNAGC	2 cut(s)	87, 2750
BpuEI	CTTGAG	2 cut(s)	218, 1877
BpuMI	CCSGG	2 cut(s)	899, 2684
Bsa29I	ATCGAT	1 cut(s)	2048
BsaBI	GATNNNNATC	1 cut(s)	906
BsaWI	WCCGGW	1 cut(s)	1814
BsaXI	ACNNNNNCTCC	8 cut(s)	1035, 1065, 1830, 1860, 2664, 2694, 2746, 2776
Bsc4I	CCNNNNNNNGG	8 cut(s)	117, 734, 1401, 1424, 1834, 1848, 2246, 2631
Bse118I	RCCGGY	1 cut(s)	1814
Bse1I	ACTGG	4 cut(s)	780, 1258, 1606, 1745
Bse3DI	GCAATG	1 cut(s)	2562
Bse8I	GATNNNNATC	1 cut(s)	906
BseBI	CCWGG	4 cut(s)	645, 963, 1380, 1500
BseCI	ATCGAT	1 cut(s)	2048
BseGI	GGATG	6 cut(s)	530, 1219, 1412, 1669, 2357, 2641
BseJI	GATNNNNATC	1 cut(s)	906
BseLI	CCNNNNNNNGG	8 cut(s)	117, 734, 1401, 1424, 1834, 1848, 2246, 2631
BseMI	GCAATG	1 cut(s)	2562
BseMII	CTCAG	3 cut(s)	101, 1296, 2764
BseNI	ACTGG	4 cut(s)	780, 1258, 1606, 1745
BseRI	GAGGAG	2 cut(s)	100, 2370
BseSI	GKGCMC	4 cut(s)	72, 652, 1021, 1099
BseXI	GCAGC	6 cut(s)	319, 619, 1022, 1359, 1522, 1664
BsgI	GTGCAG	1 cut(s)	1085
BshFI	GGCC	8 cut(s)	121, 179, 342, 650, 1134, 1378, 2239, 2624
BshNI	GGYRCC	1 cut(s)	67
BshTI	ACCGGT	1 cut(s)	1814
BshVI	ATCGAT	1 cut(s)	2048
BsiHKAI	GWGCWC	5 cut(s)	393, 1099, 1863, 1970, 2477
BsiHKCI	CYCGRG	2 cut(s)	702, 1401
BsiSI	CCGG	3 cut(s)	899, 1815, 2683
BslFI	GGGAC	6 cut(s)	253, 1060, 1740, 2149, 2387, 2791
BslI	CCNNNNNNNGG	8 cut(s)	117, 734, 1401, 1424, 1834, 1848, 2246, 2631
BsmAI	GTCTC	1 cut(s)	112
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	6 cut(s)	253, 1060, 1740, 2149, 2387, 2791
BsmI	GAATGC	4 cut(s)	1775, 1820, 2315, 2363
BsnI	GGCC	8 cut(s)	121, 179, 342, 650, 1134, 1378, 2239, 2624
BsoBI	CYCGRG	2 cut(s)	702, 1401
Bsp120I	GGGCCC	1 cut(s)	648
Bsp1286I	GDGCHC	9 cut(s)	72, 145, 393, 652, 1021, 1099, 1863, 1970, 2477
Bsp1407I	TGTACA	2 cut(s)	715, 2059
Bsp19I	CCATGG	2 cut(s)	72, 2205
BspACI	CCGC	5 cut(s)	198, 344, 2250, 2349, 2605
BspANI	GGCC	8 cut(s)	121, 179, 342, 650, 1134, 1378, 2239, 2624
BspCNI	CTCAG	3 cut(s)	100, 1297, 2763
BspDI	ATCGAT	1 cut(s)	2048
BspHI	TCATGA	1 cut(s)	1905
BspLI	GGNNCC	5 cut(s)	69, 649, 650, 651, 1840
BspMI	ACCTGC	1 cut(s)	2662
BspOI	GCTAGC	1 cut(s)	2787
BspPI	GGATC	5 cut(s)	419, 771, 2044, 2108, 2437
BspT107I	GGYRCC	1 cut(s)	67
BspTI	CTTAAG	2 cut(s)	655, 1157
BsrDI	GCAATG	1 cut(s)	2562
BsrFI	RCCGGY	1 cut(s)	1814
BsrGI	TGTACA	2 cut(s)	715, 2059
BsrI	ACTGG	4 cut(s)	780, 1258, 1606, 1745
BssAI	RCCGGY	1 cut(s)	1814
BssSI	CACGAG	1 cut(s)	1874
BssT1I	CCWWGG	4 cut(s)	72, 597, 759, 2205
Bst2BI	CACGAG	1 cut(s)	1874
Bst2UI	CCWGG	4 cut(s)	645, 963, 1380, 1500
Bst4CI	ACNGT	6 cut(s)	106, 295, 1051, 1963, 2059, 2429
Bst6I	CTCTTC	1 cut(s)	2727
BstAFI	CTTAAG	2 cut(s)	655, 1157
BstAPI	GCANNNNNTGC	1 cut(s)	1016
BstAUI	TGTACA	2 cut(s)	715, 2059
BstC8I	GCNNGC	5 cut(s)	344, 1430, 2070, 2557, 2785
BstDEI	CTNAG	4 cut(s)	87, 114, 1305, 2750
BstDSI	CCRYGG	3 cut(s)	72, 1882, 2205
BstEII	GGTNACC	1 cut(s)	2429
BstENI	CCTNNNNNAGG	1 cut(s)	115
BstF5I	GGATG	6 cut(s)	530, 1219, 1412, 1669, 2357, 2641
BstHHI	GCGC	1 cut(s)	2561
BstMAI	GTCTC	1 cut(s)	112
BstMWI	GCNNNNNNNGC	8 cut(s)	98, 185, 194, 629, 986, 1016, 2529, 2799
BstNI	CCWGG	4 cut(s)	645, 963, 1380, 1500
BstNSI	RCATGY	2 cut(s)	722, 2559
BstPAI	GACNNNNGTC	1 cut(s)	1491
BstPI	GGTNACC	1 cut(s)	2429
BstSCI	CCNGG	6 cut(s)	643, 897, 961, 1378, 1498, 2682
BstSFI	CTRYAG	1 cut(s)	2584
BstSLI	GKGCMC	4 cut(s)	72, 652, 1021, 1099
BstV1I	GCAGC	6 cut(s)	319, 619, 1022, 1359, 1522, 1664
BstV2I	GAAGAC	1 cut(s)	2217
BstX2I	RGATCY	4 cut(s)	424, 763, 2442, 2663
BstYI	RGATCY	4 cut(s)	424, 763, 2442, 2663
Bsu15I	ATCGAT	1 cut(s)	2048
BsuI	GTATCC	2 cut(s)	895, 1633
BsuRI	GGCC	8 cut(s)	121, 179, 342, 650, 1134, 1378, 2239, 2624
BsuTUI	ATCGAT	1 cut(s)	2048
BtgI	CCRYGG	3 cut(s)	72, 1882, 2205
BtrI	CACGTC	1 cut(s)	367
BtsCI	GGATG	6 cut(s)	530, 1219, 1412, 1669, 2357, 2641
BtsI	GCAGTG	4 cut(s)	38, 283, 1097, 1433
BtsIMutI	CAGTG	9 cut(s)	38, 283, 787, 1097, 1433, 1968, 2055, 2513, 2793
BveI	ACCTGC	1 cut(s)	2662
Cac8I	GCNNGC	5 cut(s)	344, 1430, 2070, 2557, 2785
CciI	TCATGA	1 cut(s)	1905
CfoI	GCGC	1 cut(s)	2561
Cfr10I	RCCGGY	1 cut(s)	1814
Cfr13I	GGNCC	5 cut(s)	341, 648, 649, 1886, 2237
ClaI	ATCGAT	1 cut(s)	2048
CseI	GACGC	1 cut(s)	2682
Csp6I	GTAC	6 cut(s)	398, 517, 716, 836, 1582, 2060
CspAI	ACCGGT	1 cut(s)	1814
CviAII	CATG	9 cut(s)	73, 263, 719, 950, 1717, 1906, 2206, 2495, 2556
CviQI	GTAC	6 cut(s)	398, 517, 716, 836, 1582, 2060
DdeI	CTNAG	4 cut(s)	87, 114, 1305, 2750
DraI	TTTAAA	1 cut(s)	1335
DraIII	CACNNNGTG	2 cut(s)	476, 2310
EaeI	YGGCCR	1 cut(s)	177
Eam1104I	CTCTTC	1 cut(s)	2727
EarI	CTCTTC	1 cut(s)	2727
EciI	GGCGGA	1 cut(s)	2265
Ecl136II	GAGCTC	1 cut(s)	391
Eco130I	CCWWGG	4 cut(s)	72, 597, 759, 2205
Eco24I	GRGCYC	3 cut(s)	145, 393, 652
Eco32I	GATATC	2 cut(s)	664, 2103
Eco47I	GGWCC	1 cut(s)	1886
Eco53kI	GAGCTC	1 cut(s)	391
Eco57I	CTGAAG	3 cut(s)	1175, 1802, 2213
Eco88I	CYCGRG	2 cut(s)	702, 1401
Eco91I	GGTNACC	1 cut(s)	2429
EcoICRI	GAGCTC	1 cut(s)	391
EcoNI	CCTNNNNNAGG	1 cut(s)	115
EcoO109I	RGGNCCY	2 cut(s)	648, 649
EcoO65I	GGTNACC	1 cut(s)	2429
EcoRII	CCWGG	4 cut(s)	643, 961, 1378, 1498
EcoRV	GATATC	2 cut(s)	664, 2103
EcoT14I	CCWWGG	4 cut(s)	72, 597, 759, 2205
EcoT22I	ATGCAT	1 cut(s)	991
EcoT38I	GRGCYC	3 cut(s)	145, 393, 652
ErhI	CCWWGG	4 cut(s)	72, 597, 759, 2205
Esp3I	CGTCTC	1 cut(s)	112
FaeI	CATG	9 cut(s)	76, 266, 722, 953, 1720, 1909, 2209, 2498, 2559
FalI	AAGNNNNNCTT	4 cut(s)	620, 652, 1151, 1183
FaqI	GGGAC	6 cut(s)	253, 1060, 1740, 2149, 2387, 2791
FatI	CATG	9 cut(s)	72, 262, 718, 949, 1716, 1905, 2205, 2494, 2555
FauI	CCCGC	1 cut(s)	351
FauNDI	CATATG	3 cut(s)	991, 1573, 2745
FblI	GTMKAC	1 cut(s)	2671
Fnu4HI	GCNGC	7 cut(s)	198, 308, 633, 1011, 1348, 1536, 1653
FokI	GGATG	6 cut(s)	537, 1206, 1419, 1676, 2364, 2648
FriOI	GRGCYC	3 cut(s)	145, 393, 652
Fsp4HI	GCNGC	7 cut(s)	198, 308, 633, 1011, 1348, 1536, 1653
GlaI	GCGC	1 cut(s)	2560
GluI	GCNGC	7 cut(s)	198, 308, 633, 1011, 1348, 1536, 1653
HaeIII	GGCC	8 cut(s)	121, 179, 342, 650, 1134, 1378, 2239, 2624
HapII	CCGG	3 cut(s)	899, 1815, 2683
HgaI	GACGC	1 cut(s)	2682
HhaI	GCGC	1 cut(s)	2561
Hin1II	CATG	9 cut(s)	76, 266, 722, 953, 1720, 1909, 2209, 2498, 2559
Hin6I	GCGC	1 cut(s)	2559
HinP1I	GCGC	1 cut(s)	2559
HincII	GTYRAC	2 cut(s)	2400, 2672
HindII	GTYRAC	2 cut(s)	2400, 2672
HindIII	AAGCTT	2 cut(s)	300, 2521
HpaII	CCGG	3 cut(s)	899, 1815, 2683
HphI	GGTGA	5 cut(s)	602, 1394, 1804, 2441, 2805
Hpy166II	GTNNAC	8 cut(s)	150, 398, 688, 1097, 1889, 2340, 2400, 2672
Hpy188I	TCNGA	8 cut(s)	132, 220, 1118, 1239, 1508, 1800, 2232, 2422
Hpy8I	GTNNAC	8 cut(s)	150, 398, 688, 1097, 1889, 2340, 2400, 2672
Hpy99I	CGWCG	1 cut(s)	2676
HpyAV	CCTTC	7 cut(s)	19, 646, 947, 1124, 1838, 2078, 2237
HpyCH4III	ACNGT	6 cut(s)	106, 295, 1051, 1963, 2059, 2429
HpyCH4IV	ACGT	4 cut(s)	366, 378, 1340, 2245
HpyF10VI	GCNNNNNNNGC	8 cut(s)	98, 185, 194, 629, 986, 1016, 2529, 2799
HpyF3I	CTNAG	4 cut(s)	87, 114, 1305, 2750
HpySE526I	ACGT	4 cut(s)	366, 378, 1340, 2245
Hsp92II	CATG	9 cut(s)	76, 266, 722, 953, 1720, 1909, 2209, 2498, 2559
HspAI	GCGC	1 cut(s)	2559
LmnI	GCTCC	4 cut(s)	396, 416, 1838, 2662
Lsp1109I	GCAGC	6 cut(s)	319, 619, 1022, 1359, 1522, 1664
LweI	GCATC	5 cut(s)	583, 935, 1639, 2081, 2488
MaeII	ACGT	4 cut(s)	366, 378, 1340, 2245
MaeIII	GTNAC	7 cut(s)	476, 1463, 1666, 1810, 2191, 2429, 2686
MfeI	CAATTG	3 cut(s)	201, 498, 2118
MflI	RGATCY	4 cut(s)	424, 763, 2442, 2663
MhlI	GDGCHC	9 cut(s)	72, 145, 393, 652, 1021, 1099, 1863, 1970, 2477
MlyI	GAGTC	6 cut(s)	725, 967, 989, 1501, 1730, 2369
Mph1103I	ATGCAT	1 cut(s)	991
MroXI	GAANNNNTTC	1 cut(s)	1787
MseI	TTAA	8 cut(s)	384, 656, 1158, 1214, 1334, 1869, 2198, 2821
MslI	CAYNNNNRTG	3 cut(s)	77, 931, 1574
MspA1I	CMGCKG	3 cut(s)	310, 1655, 2068
MspCI	CTTAAG	2 cut(s)	655, 1157
MspI	CCGG	3 cut(s)	899, 1815, 2683
MspR9I	CCNGG	6 cut(s)	645, 899, 963, 1380, 1500, 2684
MunI	CAATTG	3 cut(s)	201, 498, 2118
Mva1269I	GAATGC	4 cut(s)	1775, 1820, 2315, 2363
MvaI	CCWGG	4 cut(s)	645, 963, 1380, 1500
MwoI	GCNNNNNNNGC	8 cut(s)	98, 185, 194, 629, 986, 1016, 2529, 2799
NciI	CCSGG	2 cut(s)	899, 2684
NcoI	CCATGG	2 cut(s)	72, 2205
NdeI	CATATG	3 cut(s)	991, 1573, 2745
NheI	GCTAGC	1 cut(s)	2783
NlaIII	CATG	9 cut(s)	76, 266, 722, 953, 1720, 1909, 2209, 2498, 2559
NlaIV	GGNNCC	5 cut(s)	69, 649, 650, 651, 1840
NmeAIII	GCCGAG	1 cut(s)	147
NmuCI	GTSAC	3 cut(s)	476, 1810, 2429
NsiI	ATGCAT	1 cut(s)	991
NspI	RCATGY	2 cut(s)	722, 2559
OliI	CACNNNNGTG	1 cut(s)	1574
PaeI	GCATGC	1 cut(s)	2559
PaeR7I	CTCGAG	1 cut(s)	702
PagI	TCATGA	1 cut(s)	1905
PciI	ACATGT	1 cut(s)	718
PctI	GAATGC	4 cut(s)	1775, 1820, 2315, 2363
PdmI	GAANNNNTTC	1 cut(s)	1787
PfeI	GAWTC	8 cut(s)	221, 698, 827, 859, 1600, 1852, 2124, 2589
PflMI	CCANNNNNTGG	1 cut(s)	2246
PinAI	ACCGGT	1 cut(s)	1814
PkrI	GCNGC	7 cut(s)	199, 309, 634, 1012, 1349, 1537, 1654
PleI	GAGTC	6 cut(s)	725, 966, 989, 1500, 1729, 2369
PpsI	GAGTC	6 cut(s)	725, 966, 989, 1500, 1729, 2369
PscI	ACATGT	1 cut(s)	718
PshAI	GACNNNNGTC	1 cut(s)	1491
PshBI	ATTAAT	1 cut(s)	1869
Psp124BI	GAGCTC	1 cut(s)	393
Psp6I	CCWGG	4 cut(s)	643, 961, 1378, 1498
PspEI	GGTNACC	1 cut(s)	2429
PspGI	CCWGG	4 cut(s)	643, 961, 1378, 1498
PspN4I	GGNNCC	5 cut(s)	69, 649, 650, 651, 1840
PspOMI	GGGCCC	1 cut(s)	648
PspPI	GGNCC	5 cut(s)	341, 648, 649, 1886, 2237
PsrI	GAACNNNNNNTAC	2 cut(s)	28, 60
PsuI	RGATCY	4 cut(s)	424, 763, 2442, 2663
PvuII	CAGCTG	3 cut(s)	310, 1655, 2068
RsaI	GTAC	6 cut(s)	399, 518, 717, 837, 1583, 2061
RsaNI	GTAC	6 cut(s)	398, 517, 716, 836, 1582, 2060
RseI	CAYNNNNRTG	3 cut(s)	77, 931, 1574
SacI	GAGCTC	1 cut(s)	393
SalI	GTCGAC	1 cut(s)	2670
SaqAI	TTAA	8 cut(s)	384, 656, 1158, 1214, 1334, 1869, 2198, 2821
SatI	GCNGC	7 cut(s)	198, 308, 633, 1011, 1348, 1536, 1653
Sau96I	GGNCC	5 cut(s)	341, 648, 649, 1886, 2237
ScaI	AGTACT	1 cut(s)	518
SchI	GAGTC	6 cut(s)	725, 967, 989, 1501, 1730, 2369
ScrFI	CCNGG	6 cut(s)	645, 899, 963, 1380, 1500, 2684
SduI	GDGCHC	9 cut(s)	72, 145, 393, 652, 1021, 1099, 1863, 1970, 2477
SfaNI	GCATC	5 cut(s)	583, 935, 1639, 2081, 2488
SfcI	CTRYAG	1 cut(s)	2584
Sfr274I	CTCGAG	1 cut(s)	702
SgrAI	CRCCGGYG	1 cut(s)	1814
SinI	GGWCC	1 cut(s)	1886
SlaI	CTCGAG	1 cut(s)	702
SmiMI	CAYNNNNRTG	3 cut(s)	77, 931, 1574
SmlI	CTYRAG	5 cut(s)	233, 655, 702, 1157, 1856
SmoI	CTYRAG	5 cut(s)	233, 655, 702, 1157, 1856
SpeI	ACTAGT	3 cut(s)	1289, 1729, 2690
SphI	GCATGC	1 cut(s)	2559
SsiI	CCGC	5 cut(s)	198, 344, 2250, 2349, 2605
SspI	AATATT	1 cut(s)	1122
SstI	GAGCTC	1 cut(s)	393
StyD4I	CCNGG	6 cut(s)	643, 897, 961, 1378, 1498, 2682
StyI	CCWWGG	4 cut(s)	72, 597, 759, 2205
TaaI	ACNGT	6 cut(s)	106, 295, 1051, 1963, 2059, 2429
TaiI	ACGT	4 cut(s)	369, 381, 1343, 2248
TaqI	TCGA	7 cut(s)	703, 2024, 2048, 2105, 2268, 2628, 2671
TaqII	GACCGA	2 cut(s)	32, 1470
TatI	WGTACW	3 cut(s)	516, 715, 2059
TauI	GCSGC	1 cut(s)	200
TfiI	GAWTC	8 cut(s)	221, 698, 827, 859, 1600, 1852, 2124, 2589
Tru1I	TTAA	8 cut(s)	384, 656, 1158, 1214, 1334, 1869, 2198, 2821
Tru9I	TTAA	8 cut(s)	384, 656, 1158, 1214, 1334, 1869, 2198, 2821
TscAI	CASTG	9 cut(s)	45, 283, 787, 1104, 1440, 1968, 2062, 2520, 2800
TseFI	GTSAC	3 cut(s)	476, 1810, 2429
TseI	GCWGC	6 cut(s)	307, 632, 1010, 1347, 1535, 1652
Tsp45I	GTSAC	3 cut(s)	476, 1810, 2429
TspDTI	ATGAA	7 cut(s)	222, 872, 966, 1143, 1178, 1208, 2505
TspGWI	ACGGA	6 cut(s)	383, 1056, 1599, 1871, 2161, 2435
TspRI	CASTG	9 cut(s)	45, 283, 787, 1104, 1440, 1968, 2062, 2520, 2800
Van91I	CCANNNNNTGG	1 cut(s)	2246
Vha464I	CTTAAG	2 cut(s)	655, 1157
VneI	GTGCAC	1 cut(s)	1095
VpaK11BI	GGWCC	1 cut(s)	1886
VspI	ATTAAT	1 cut(s)	1869
XagI	CCTNNNNNAGG	1 cut(s)	115
XapI	RAATTY	4 cut(s)	214, 1210, 1282, 2150
XceI	RCATGY	2 cut(s)	722, 2559
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XhoI	CTCGAG	1 cut(s)	702
XmiI	GTMKAC	1 cut(s)	2671
XmnI	GAANNNNTTC	1 cut(s)	1787
ZrmI	AGTACT	1 cut(s)	518
Zsp2I	ATGCAT	1 cut(s)	991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.