Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0001061

Physical Location & Seq

Genomic Coordinates Forward (+)

77266707 .. 77272948

Gene Structure 6242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG544200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGCCTGTACGGCCTTCATCAAAGCTCGTCCTTCAGCCTAGTTCAAAGCTCAGGAATCAACAGAGCTCTGTAGAAATGGAGGCCTTCTTGACCCATGTATGCAAGACAAGAACACTGCTTACATTGATCTTATGTATTTGGGTGCCCATGGAAGTGATGGCTCAGACTGGAAATGCCACCGTCTCGTCTAAGAGGCCGAGTTCTCTGAATATTGGAGCTCTGTTTACTTTCAATTCAGCCATTGGAAGGTCGGCCAAACCAGCAATCCTAGCCGCAATTGAAGAAGTTAATTCTGATTCAAGCGTTCTCGAGGGGACTAAATTGAACATTATTTTCCATGATACAAATTGCAGTGGATTTCTTGGAACTGTGGAAGCTTTGCAGCTCATTGAAAATGATGTGGTTGCTGCAATTGGCCCACAGTCCTCAGGAATAGCTCATGTCATATCCCACGTTGTTAATGAGCTCCATGTACCACTTCTGTCATTTGGAGCAACAGACCCCTCCCTTTCTGCTCTACAATACCCGTATTTTGTACGCACCACGCAGAGTGACTATTTTCAAATGTATGCAGTTGCTGATATGGTTGAGTATTTCGGATGGAGAGAAGTAATTGCCATATTTGTAGATGATGATTGTGGCAGAAATGGGATTTCAGTACTAGGTGATGCCTTAGCAAAGAAGCGTTCCAAGATTGCTTACAAGGCTGCCTTCTCTCCTGGAGCCCCATTAAGCGATATCAATGACTTGTTGGTGGGAGTAAACCTCATGGAATCTCGGGTGTATATTGTGCATGTAAATCCTGACTCTGGTTTGTCAATCTTTTCTGTTGCCAAGGATCTTGGAATGATGACCAGTGGCTATGTTTGGATTGCAACAGATTGGCTTCCTACTAATTTAGATTCATTAGTACCACCTGACCCTGACAAAATGAATCTTTTACAAGGGGTTGTTGCTCTTCGTCATCATTCCCCGGATACTGATCTCAAAAAGAGTTTTGCATCTAAATGGAGCAAACTAAAGCATGAAGGGAGTTCGGGCTTCAATTCTTATGCTCTCTATGCATATGACTCTATTTGGTTAGCAGCCCGTGCCCTTGATGTTTTTCTCAATGAAGGAGGGACTGTATCTTTCTCTAGTGACCCAAAGTTGAAAGATACAAATAGAAGCGCACTGCACTTAGCATCACTCCGAATATTTGATGGAGGCCAACGTTACCTGCAGACACTTCTTAAGATGAACTTCACAGGTGTGAGTGGTCAGCTTCTGTTTGATCTGGATAAGAATTTAATTCATCCAGCTTATGATGTTCTGAACATTGGTGGAACTGGATTTCGTAAAATTGGTTATTGGTCAAATTCTTCTGGTCTGTCGACCACCGAGCCAGAGACATTATATGGGAAGTCGTTCAATACTTCTACCAGAACTCCACATCTTTATAGTGTTATATGGCCTGGCGAAACTATAGCTACACCTCGGGGATGGGTATTTCCTAACAATGGCAAGCCACTGCGTATTGCTGTGCCTGAGCAAGTAAGTTACAAAGATTTTGTGTCTAAAGACAAGAGTCCTCCTGGGGTCAGAGGATATTGTATTGATATATTTGAAGCTGCTATAAACTTGTTGCCTTATCCTGTGCCACGCACATATATGTTGTATGGAGATGGCAAGAGGAATCCCCAGTACAACGATCTTGTTGGTCAAGTTGCTCTAAATAACTTTGATGCAGCTGTTGGGGATGTTACAATAACTACAAATAGGACAAGAATTGTTGATTTTACACAGCCTTACATGGAATCAGGACTAGTTGTAGTTGTTCCTGTCAAACAGGTAAAATCAAACCCTTGGGCTTTCCTGAAGCCATTTACTATTGAGATGTGGTTAGTCACCGGTGCATTCTTCCTTCTTGTGGGAGTCGTTGTTTGGATTCTTGAGCACAGGATTAATCACGAGTTCCGTGGTCCACCAAGGGAACAGCTCATGACTATTTTTTGGTTAGTATGTTCTACATCATTAAGGCCTCTGATTTGTTTGAGACTTTCTGATTCATATAGTCACAAGGTGTCTTGCTGGAAAGAAAAATGCCCAAATTCCCTAATTGATGGACCTAGATGTTGCCTGGGTGTGGGGTGCCTATTAAATCACTTGGTGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009266 GO:0009409 GO:0009507 GO:0009536 GO:0009605 GO:0009611 GO:0009612 GO:0009628 GO:0009719 GO:0009987 GO:0010033 GO:0010034 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015276 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0033554 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070417 GO:0070588 GO:0070838 GO:0070887 GO:0071214 GO:0071229 GO:0071230 GO:0071236 GO:0071260 GO:0071310 GO:0071311 GO:0071417 GO:0071495 GO:0071496 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0104004 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

718

Amino Acids

79.32

Weight (kDa)

7.57

Isoelectric Point (pI)

38.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	71 - 366	4.3e-19	Periplasmic binding protein
ANF_receptor	PF01094	86 - 442	2.7e-88	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	525 - 608	1.4e-11	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	624 - 670	3.5e-08	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390
fragaria_vesca	FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291
malus_domestica	MD09G1069900.v1.1 MD09G1070100.v1.1 MD09G1107700.v1.1 MD09G1108100.v1.1 MD17G1096100.v1.1
prunus_persica	Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1
pyrus_communis	pycom09g03000 pycom09g03030 pycom09g03050 pycom09g03070 pycom15g20430 pycom17g09220
rosa_chinensis	RchiOBHm_Chr1g0324131 RchiOBHm_Chr2g0159571 RchiOBHm_Chr2g0159581
rosa_laevigata	RLG00000021167
rosa_multiflora	Rmu_co8397097.1_g000001 Rmu_sc0004966.1_g000017 Rmu_sc0020031.1_g000001
rosa_roxburghii	Rroxscaffold_2G00090390
rosa_rugosa	Rorug02G0476900 Rorug02G0477000 Rorug02G0477100 Rorug02G0477200
rosa_samantha	Rh2AG544200 Rh2BG557000 Rh2CG527200 Rh2DG566000
rosa_wichuraiana	Rw2G044990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1227
AccB1I	GGYRCC	2 cut(s)	142, 2130
AccI	GTMKAC	1 cut(s)	1373
AciI	CCGC	1 cut(s)	273
AclI	AACGTT	1 cut(s)	1213
AclWI	GGATC	1 cut(s)	846
AcoI	YGGCCR	1 cut(s)	252
AcsI	RAATTY	3 cut(s)	1285, 1357, 2089
AcuI	CTGAAG	2 cut(s)	17, 1877
AdeI	CACNNNGTG	2 cut(s)	2062, 2149
AfaI	GTAC	6 cut(s)	9, 474, 537, 660, 912, 1685
AfiI	CCNNNNNNNGG	5 cut(s)	246, 809, 1499, 1909, 2125
AflII	CTTAAG	1 cut(s)	1232
AgeI	ACCGGT	1 cut(s)	1889
AhlI	ACTAGT	1 cut(s)	1804
AjnI	CCWGG	4 cut(s)	718, 1453, 1573, 2118
AleI	CACNNNNGTG	1 cut(s)	1250
Alw21I	GWGCWC	4 cut(s)	68, 220, 468, 1938
Alw26I	GTCTC	3 cut(s)	187, 1382, 2029
AlwI	GGATC	1 cut(s)	846
AlwNI	CAGNNNCTG	2 cut(s)	578, 1267
Ama87I	CYCGRG	3 cut(s)	308, 777, 1476
AoxI	GGCC	8 cut(s)	11, 81, 194, 252, 415, 1207, 1451, 2018
ApeKI	GCWGC	6 cut(s)	382, 407, 707, 1085, 1610, 1727
ApoI	RAATTY	3 cut(s)	1285, 1357, 2089
AseI	ATTAAT	1 cut(s)	1944
AsiGI	ACCGGT	1 cut(s)	1889
Asp700I	GAANNNNTTC	1 cut(s)	1406
AspLEI	GCGC	1 cut(s)	1172
AspS9I	GGNCC	3 cut(s)	416, 1961, 2105
AsuC2I	CCSGG	1 cut(s)	974
AsuHPI	GGTGA	2 cut(s)	677, 1879
AvaI	CYCGRG	3 cut(s)	308, 777, 1476
AvaII	GGWCC	2 cut(s)	1961, 2105
AxyI	CCTNAGG	1 cut(s)	427
BaeGI	GKGCMC	2 cut(s)	147, 1096
BanI	GGYRCC	2 cut(s)	142, 2130
BanII	GRGCYC	4 cut(s)	68, 220, 468, 727
BauI	CACGAG	1 cut(s)	1949
Bbv12I	GWGCWC	4 cut(s)	68, 220, 468, 1938
BbvI	GCAGC	6 cut(s)	394, 394, 694, 1097, 1597, 1739
BccI	CCATC	6 cut(s)	151, 594, 1196, 1476, 1658, 2096
BceAI	ACGGC	1 cut(s)	26
BciT130I	CCWGG	4 cut(s)	720, 1455, 1575, 2120
BciVI	GTATCC	1 cut(s)	970
BcnI	CCSGG	1 cut(s)	974
BcoDI	GTCTC	3 cut(s)	187, 1382, 2029
BcuI	ACTAGT	1 cut(s)	1804
BfaI	CTAG	6 cut(s)	39, 269, 662, 1137, 1805, 2109
BfmI	CTRYAG	3 cut(s)	69, 1220, 1464
BfrI	CTTAAG	1 cut(s)	1232
BfuAI	ACCTGC	1 cut(s)	1227
BfuI	GTATCC	1 cut(s)	970
BglI	GCCNNNNNGGC	1 cut(s)	10
BisI	GCNGC	7 cut(s)	273, 383, 408, 708, 1086, 1611, 1728
BlsI	GCNGC	7 cut(s)	274, 384, 409, 709, 1087, 1612, 1729
BmcAI	AGTACT	1 cut(s)	660
Bme1390I	CCNGG	5 cut(s)	720, 974, 1455, 1575, 2120
Bme18I	GGWCC	2 cut(s)	1961, 2105
BmeT110I	CYCGRG	3 cut(s)	308, 777, 1476
BmgT120I	GGNCC	3 cut(s)	416, 1961, 2105
BmiI	GGNNCC	3 cut(s)	144, 724, 2132
BmrFI	CCNGG	5 cut(s)	720, 974, 1455, 1575, 2120
BmrI	ACTGGG	1 cut(s)	1675
BmsI	GCATC	4 cut(s)	658, 1010, 1193, 1714
BmuI	ACTGGG	1 cut(s)	1675
BoxI	GACNNNNGTC	1 cut(s)	1566
BplI	GAGNNNNNCTC	2 cut(s)	750, 782
BpmI	CTGGAG	1 cut(s)	741
Bpu10I	CCTNAGC	3 cut(s)	50, 673, 1527
BpuEI	CTTGAG	1 cut(s)	1952
BpuMI	CCSGG	1 cut(s)	974
BsaBI	GATNNNNATC	1 cut(s)	981
BsaJI	CCNNGG	9 cut(s)	147, 834, 972, 1475, 1574, 1844, 1957, 1967, 2119
BsaWI	WCCGGW	1 cut(s)	1889
BsaXI	ACNNNNNCTCC	6 cut(s)	1110, 1140, 1411, 1441, 1905, 1935
Bsc4I	CCNNNNNNNGG	5 cut(s)	246, 809, 1499, 1909, 2125
Bse118I	RCCGGY	1 cut(s)	1889
Bse1I	ACTGG	4 cut(s)	172, 855, 1333, 1681
Bse21I	CCTNAGG	1 cut(s)	427
Bse8I	GATNNNNATC	1 cut(s)	981
BseBI	CCWGG	4 cut(s)	720, 1455, 1575, 2120
BseDI	CCNNGG	9 cut(s)	147, 834, 972, 1475, 1574, 1844, 1957, 1967, 2119
BseGI	GGATG	4 cut(s)	605, 1294, 1487, 1744
BseJI	GATNNNNATC	1 cut(s)	981
BseLI	CCNNNNNNNGG	5 cut(s)	246, 809, 1499, 1909, 2125
BseMII	CTCAG	4 cut(s)	64, 176, 441, 1518
BseNI	ACTGG	4 cut(s)	172, 855, 1333, 1681
BseSI	GKGCMC	2 cut(s)	147, 1096
BseXI	GCAGC	6 cut(s)	394, 394, 694, 1097, 1597, 1739
BsgI	GTGCAG	1 cut(s)	1160
BshFI	GGCC	8 cut(s)	13, 83, 196, 254, 417, 1209, 1453, 2020
BshNI	GGYRCC	2 cut(s)	142, 2130
BshTI	ACCGGT	1 cut(s)	1889
BsiHKAI	GWGCWC	4 cut(s)	68, 220, 468, 1938
BsiHKCI	CYCGRG	3 cut(s)	308, 777, 1476
BsiSI	CCGG	2 cut(s)	974, 1890
BslFI	GGGAC	2 cut(s)	328, 1135
BslI	CCNNNNNNNGG	5 cut(s)	246, 809, 1499, 1909, 2125
BsmAI	GTCTC	3 cut(s)	187, 1382, 2029
BsmBI	CGTCTC	1 cut(s)	187
BsmFI	GGGAC	2 cut(s)	328, 1135
BsmI	GAATGC	1 cut(s)	1895
BsnI	GGCC	8 cut(s)	13, 83, 196, 254, 417, 1209, 1453, 2020
BsoBI	CYCGRG	3 cut(s)	308, 777, 1476
Bsp1286I	GDGCHC	7 cut(s)	68, 147, 220, 468, 727, 1096, 1938
Bsp143I	GATC	5 cut(s)	126, 838, 982, 1273, 1690
Bsp19I	CCATGG	1 cut(s)	147
BspACI	CCGC	1 cut(s)	273
BspANI	GGCC	8 cut(s)	13, 83, 196, 254, 417, 1209, 1453, 2020
BspCNI	CTCAG	4 cut(s)	63, 175, 440, 1519
BspHI	TCATGA	1 cut(s)	1980
BspLI	GGNNCC	3 cut(s)	144, 724, 2132
BspMAI	CTGCAG	1 cut(s)	1224
BspMI	ACCTGC	1 cut(s)	1227
BspPI	GGATC	1 cut(s)	846
BspQI	GCTCTTC	1 cut(s)	963
BspT107I	GGYRCC	2 cut(s)	142, 2130
BspTI	CTTAAG	1 cut(s)	1232
BsrFI	RCCGGY	1 cut(s)	1889
BsrI	ACTGG	4 cut(s)	172, 855, 1333, 1681
BssAI	RCCGGY	1 cut(s)	1889
BssECI	CCNNGG	9 cut(s)	147, 834, 972, 1475, 1574, 1844, 1957, 1967, 2119
BssMI	GATC	5 cut(s)	126, 838, 982, 1273, 1690
BssSI	CACGAG	1 cut(s)	1949
BssT1I	CCWWGG	4 cut(s)	147, 834, 1844, 1967
Bst2BI	CACGAG	1 cut(s)	1949
Bst2UI	CCWGG	4 cut(s)	720, 1455, 1575, 2120
Bst4CI	ACNGT	4 cut(s)	181, 370, 423, 1126
Bst6I	CTCTTC	1 cut(s)	963
BstAFI	CTTAAG	1 cut(s)	1232
BstAPI	GCANNNNNTGC	1 cut(s)	1091
BstC8I	GCNNGC	1 cut(s)	1505
BstDEI	CTNAG	7 cut(s)	50, 162, 189, 427, 673, 1180, 1527
BstDSI	CCRYGG	2 cut(s)	147, 1957
BstF5I	GGATG	4 cut(s)	605, 1294, 1487, 1744
BstHHI	GCGC	1 cut(s)	1172
BstKTI	GATC	5 cut(s)	129, 841, 985, 1276, 1693
BstMAI	GTCTC	3 cut(s)	187, 1382, 2029
BstMBI	GATC	5 cut(s)	126, 838, 982, 1273, 1690
BstMWI	GCNNNNNNNGC	6 cut(s)	10, 260, 269, 704, 1061, 1091
BstNI	CCWGG	4 cut(s)	720, 1455, 1575, 2120
BstNSI	RCATGY	1 cut(s)	797
BstPAI	GACNNNNGTC	1 cut(s)	1566
BstSCI	CCNGG	5 cut(s)	718, 972, 1453, 1573, 2118
BstSFI	CTRYAG	3 cut(s)	69, 1220, 1464
BstSLI	GKGCMC	2 cut(s)	147, 1096
BstV1I	GCAGC	6 cut(s)	394, 394, 694, 1097, 1597, 1739
BstX2I	RGATCY	1 cut(s)	838
BstYI	RGATCY	1 cut(s)	838
Bsu36I	CCTNAGG	1 cut(s)	427
BsuI	GTATCC	1 cut(s)	970
BsuRI	GGCC	8 cut(s)	13, 83, 196, 254, 417, 1209, 1453, 2020
BtgI	CCRYGG	2 cut(s)	147, 1957
BtsCI	GGATG	4 cut(s)	605, 1294, 1487, 1744
BtsI	GCAGTG	4 cut(s)	113, 358, 1172, 1508
BtsIMutI	CAGTG	5 cut(s)	113, 358, 862, 1172, 1508
BveI	ACCTGC	1 cut(s)	1227
Cac8I	GCNNGC	1 cut(s)	1505
CaiI	CAGNNNCTG	2 cut(s)	578, 1267
CciI	TCATGA	1 cut(s)	1980
CfoI	GCGC	1 cut(s)	1172
Cfr10I	RCCGGY	1 cut(s)	1889
Cfr13I	GGNCC	3 cut(s)	416, 1961, 2105
Csp6I	GTAC	6 cut(s)	8, 473, 536, 659, 911, 1684
CspAI	ACCGGT	1 cut(s)	1889
CviQI	GTAC	6 cut(s)	8, 473, 536, 659, 911, 1684
DdeI	CTNAG	7 cut(s)	50, 162, 189, 427, 673, 1180, 1527
DpnI	GATC	5 cut(s)	128, 840, 984, 1275, 1692
DpnII	GATC	5 cut(s)	126, 838, 982, 1273, 1690
DraIII	CACNNNGTG	2 cut(s)	2062, 2149
EaeI	YGGCCR	1 cut(s)	252
Eam1104I	CTCTTC	1 cut(s)	963
EarI	CTCTTC	1 cut(s)	963
Ecl136II	GAGCTC	3 cut(s)	66, 218, 466
Eco130I	CCWWGG	4 cut(s)	147, 834, 1844, 1967
Eco147I	AGGCCT	2 cut(s)	83, 2020
Eco24I	GRGCYC	4 cut(s)	68, 220, 468, 727
Eco32I	GATATC	1 cut(s)	739
Eco47I	GGWCC	2 cut(s)	1961, 2105
Eco53kI	GAGCTC	3 cut(s)	66, 218, 466
Eco57I	CTGAAG	2 cut(s)	17, 1877
Eco81I	CCTNAGG	1 cut(s)	427
Eco88I	CYCGRG	3 cut(s)	308, 777, 1476
EcoICRI	GAGCTC	3 cut(s)	66, 218, 466
EcoRII	CCWGG	4 cut(s)	718, 1453, 1573, 2118
EcoRV	GATATC	1 cut(s)	739
EcoT14I	CCWWGG	4 cut(s)	147, 834, 1844, 1967
EcoT22I	ATGCAT	1 cut(s)	1066
EcoT38I	GRGCYC	4 cut(s)	68, 220, 468, 727
ErhI	CCWWGG	4 cut(s)	147, 834, 1844, 1967
Esp3I	CGTCTC	1 cut(s)	187
FalI	AAGNNNNNCTT	4 cut(s)	695, 727, 1226, 1258
FaqI	GGGAC	2 cut(s)	328, 1135
FauNDI	CATATG	1 cut(s)	1066
FblI	GTMKAC	1 cut(s)	1373
Fnu4HI	GCNGC	7 cut(s)	273, 383, 408, 708, 1086, 1611, 1728
FokI	GGATG	4 cut(s)	612, 1281, 1494, 1751
FriOI	GRGCYC	4 cut(s)	68, 220, 468, 727
Fsp4HI	GCNGC	7 cut(s)	273, 383, 408, 708, 1086, 1611, 1728
FspBI	CTAG	6 cut(s)	39, 269, 662, 1137, 1805, 2109
GlaI	GCGC	1 cut(s)	1171
GluI	GCNGC	7 cut(s)	273, 383, 408, 708, 1086, 1611, 1728
GsuI	CTGGAG	1 cut(s)	741
HaeIII	GGCC	8 cut(s)	13, 83, 196, 254, 417, 1209, 1453, 2020
HapII	CCGG	2 cut(s)	974, 1890
HhaI	GCGC	1 cut(s)	1172
Hin6I	GCGC	1 cut(s)	1170
HinP1I	GCGC	1 cut(s)	1170
HincII	GTYRAC	1 cut(s)	1374
HindII	GTYRAC	1 cut(s)	1374
HindIII	AAGCTT	1 cut(s)	375
HpaII	CCGG	2 cut(s)	974, 1890
HphI	GGTGA	2 cut(s)	677, 1879
Hpy166II	GTNNAC	4 cut(s)	225, 763, 1374, 1964
Hpy188I	TCNGA	9 cut(s)	165, 207, 295, 599, 1193, 1314, 1583, 2025, 2044
Hpy8I	GTNNAC	4 cut(s)	225, 763, 1374, 1964
HpyAV	CCTTC	8 cut(s)	24, 41, 94, 240, 721, 1022, 1109, 1913
HpyCH4III	ACNGT	4 cut(s)	181, 370, 423, 1126
HpyCH4IV	ACGT	2 cut(s)	453, 1213
HpyF10VI	GCNNNNNNNGC	6 cut(s)	10, 260, 269, 704, 1061, 1091
HpyF3I	CTNAG	7 cut(s)	50, 162, 189, 427, 673, 1180, 1527
HpySE526I	ACGT	2 cut(s)	453, 1213
HspAI	GCGC	1 cut(s)	1170
Kzo9I	GATC	5 cut(s)	126, 838, 982, 1273, 1690
LguI	GCTCTTC	1 cut(s)	963
LmnI	GCTCC	5 cut(s)	215, 471, 491, 722, 1011
Lsp1109I	GCAGC	6 cut(s)	394, 394, 694, 1097, 1597, 1739
LweI	GCATC	4 cut(s)	658, 1010, 1193, 1714
MaeI	CTAG	6 cut(s)	39, 269, 662, 1137, 1805, 2109
MaeII	ACGT	2 cut(s)	453, 1213
MaeIII	GTNAC	7 cut(s)	551, 1139, 1214, 1538, 1741, 1885, 2054
MalI	GATC	5 cut(s)	128, 840, 984, 1275, 1692
MboI	GATC	5 cut(s)	126, 838, 982, 1273, 1690
MboII	GAAGA	4 cut(s)	293, 950, 1353, 1891
MfeI	CAATTG	2 cut(s)	276, 411
MflI	RGATCY	1 cut(s)	838
MhlI	GDGCHC	7 cut(s)	68, 147, 220, 468, 727, 1096, 1938
MlyI	GAGTC	4 cut(s)	800, 1064, 1576, 1923
Mph1103I	ATGCAT	1 cut(s)	1066
MroXI	GAANNNNTTC	1 cut(s)	1406
MseI	TTAA	8 cut(s)	288, 459, 731, 1233, 1289, 1944, 2015, 2138
MslI	CAYNNNNRTG	4 cut(s)	152, 1006, 1250, 1649
MspA1I	CMGCKG	1 cut(s)	1730
MspCI	CTTAAG	1 cut(s)	1232
MspI	CCGG	2 cut(s)	974, 1890
MspR9I	CCNGG	5 cut(s)	720, 974, 1455, 1575, 2120
MunI	CAATTG	2 cut(s)	276, 411
Mva1269I	GAATGC	1 cut(s)	1895
MvaI	CCWGG	4 cut(s)	720, 1455, 1575, 2120
MwoI	GCNNNNNNNGC	6 cut(s)	10, 260, 269, 704, 1061, 1091
NciI	CCSGG	1 cut(s)	974
NcoI	CCATGG	1 cut(s)	147
NdeI	CATATG	1 cut(s)	1066
NdeII	GATC	5 cut(s)	126, 838, 982, 1273, 1690
NlaIV	GGNNCC	3 cut(s)	144, 724, 2132
NmeAIII	GCCGAG	1 cut(s)	222
NmuCI	GTSAC	4 cut(s)	551, 1139, 1885, 2054
NsiI	ATGCAT	1 cut(s)	1066
NspI	RCATGY	1 cut(s)	797
OliI	CACNNNNGTG	1 cut(s)	1250
PaeR7I	CTCGAG	1 cut(s)	308
PagI	TCATGA	1 cut(s)	1980
PceI	AGGCCT	2 cut(s)	83, 2020
PciSI	GCTCTTC	1 cut(s)	963
PctI	GAATGC	1 cut(s)	1895
PdmI	GAANNNNTTC	1 cut(s)	1406
PfeI	GAWTC	9 cut(s)	55, 296, 773, 902, 934, 1675, 1796, 1927, 2045
PfoI	TCCNGGA	1 cut(s)	718
PinAI	ACCGGT	1 cut(s)	1889
PkrI	GCNGC	7 cut(s)	274, 384, 409, 709, 1087, 1612, 1729
PleI	GAGTC	4 cut(s)	800, 1064, 1575, 1922
PpsI	GAGTC	4 cut(s)	800, 1064, 1575, 1922
PshAI	GACNNNNGTC	1 cut(s)	1566
PshBI	ATTAAT	1 cut(s)	1944
Psp124BI	GAGCTC	3 cut(s)	68, 220, 468
Psp1406I	AACGTT	1 cut(s)	1213
Psp6I	CCWGG	4 cut(s)	718, 1453, 1573, 2118
PspGI	CCWGG	4 cut(s)	718, 1453, 1573, 2118
PspN4I	GGNNCC	3 cut(s)	144, 724, 2132
PspPI	GGNCC	3 cut(s)	416, 1961, 2105
PsrI	GAACNNNNNNTAC	2 cut(s)	103, 135
PstI	CTGCAG	1 cut(s)	1224
PstNI	CAGNNNCTG	2 cut(s)	578, 1267
PsuI	RGATCY	1 cut(s)	838
PvuII	CAGCTG	1 cut(s)	1730
RsaI	GTAC	6 cut(s)	9, 474, 537, 660, 912, 1685
RsaNI	GTAC	6 cut(s)	8, 473, 536, 659, 911, 1684
RseI	CAYNNNNRTG	4 cut(s)	152, 1006, 1250, 1649
SacI	GAGCTC	3 cut(s)	68, 220, 468
SalI	GTCGAC	1 cut(s)	1372
SapI	GCTCTTC	1 cut(s)	963
SaqAI	TTAA	8 cut(s)	288, 459, 731, 1233, 1289, 1944, 2015, 2138
SatI	GCNGC	7 cut(s)	273, 383, 408, 708, 1086, 1611, 1728
Sau3AI	GATC	5 cut(s)	126, 838, 982, 1273, 1690
Sau96I	GGNCC	3 cut(s)	416, 1961, 2105
ScaI	AGTACT	1 cut(s)	660
SchI	GAGTC	4 cut(s)	800, 1064, 1576, 1923
ScrFI	CCNGG	5 cut(s)	720, 974, 1455, 1575, 2120
SduI	GDGCHC	7 cut(s)	68, 147, 220, 468, 727, 1096, 1938
SfaNI	GCATC	4 cut(s)	658, 1010, 1193, 1714
SfcI	CTRYAG	3 cut(s)	69, 1220, 1464
Sfr274I	CTCGAG	1 cut(s)	308
SgrAI	CRCCGGYG	1 cut(s)	1889
SinI	GGWCC	2 cut(s)	1961, 2105
SlaI	CTCGAG	1 cut(s)	308
SmiMI	CAYNNNNRTG	4 cut(s)	152, 1006, 1250, 1649
SmlI	CTYRAG	3 cut(s)	308, 1232, 1931
SmoI	CTYRAG	3 cut(s)	308, 1232, 1931
SpeI	ACTAGT	1 cut(s)	1804
SseBI	AGGCCT	2 cut(s)	83, 2020
SsiI	CCGC	1 cut(s)	273
SspI	AATATT	2 cut(s)	211, 1197
SspMI	CTAG	6 cut(s)	39, 269, 662, 1137, 1805, 2109
SstI	GAGCTC	3 cut(s)	68, 220, 468
StuI	AGGCCT	2 cut(s)	83, 2020
StyD4I	CCNGG	5 cut(s)	718, 972, 1453, 1573, 2118
StyI	CCWWGG	4 cut(s)	147, 834, 1844, 1967
TaaI	ACNGT	4 cut(s)	181, 370, 423, 1126
TaiI	ACGT	2 cut(s)	456, 1216
TaqI	TCGA	2 cut(s)	309, 1373
TatI	WGTACW	2 cut(s)	658, 1683
TauI	GCSGC	1 cut(s)	275
TfiI	GAWTC	9 cut(s)	55, 296, 773, 902, 934, 1675, 1796, 1927, 2045
Tru1I	TTAA	8 cut(s)	288, 459, 731, 1233, 1289, 1944, 2015, 2138
Tru9I	TTAA	8 cut(s)	288, 459, 731, 1233, 1289, 1944, 2015, 2138
TscAI	CASTG	5 cut(s)	120, 358, 862, 1179, 1515
TseFI	GTSAC	4 cut(s)	551, 1139, 1885, 2054
TseI	GCWGC	6 cut(s)	382, 407, 707, 1085, 1610, 1727
Tsp45I	GTSAC	4 cut(s)	551, 1139, 1885, 2054
TspDTI	ATGAA	8 cut(s)	6, 894, 947, 1041, 1128, 1253, 1283, 2037
TspGWI	ACGGA	1 cut(s)	1946
TspRI	CASTG	5 cut(s)	120, 358, 862, 1179, 1515
Vha464I	CTTAAG	1 cut(s)	1232
VpaK11BI	GGWCC	2 cut(s)	1961, 2105
VspI	ATTAAT	1 cut(s)	1944
XapI	RAATTY	3 cut(s)	1285, 1357, 2089
XceI	RCATGY	1 cut(s)	797
XcmI	CCANNNNNNNNNTGG	1 cut(s)	154
XhoI	CTCGAG	1 cut(s)	308
XmiI	GTMKAC	1 cut(s)	1373
XmnI	GAANNNNTTC	1 cut(s)	1406
XspI	CTAG	6 cut(s)	39, 269, 662, 1137, 1805, 2109
ZrmI	AGTACT	1 cut(s)	660
Zsp2I	ATGCAT	1 cut(s)	1066

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.