Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0001061

Physical Location & Seq

Genomic Coordinates Forward (+)

70211439 .. 70217273

Gene Structure 5835 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG527200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGGAGGCCTTCTTGACCCATGTATGCAAGACAAGAACACTGCTTACATTGATCTTATGTATTTGGGTGCCCATGGAAGTGATGGCTCAGACTGGAAATGCCCCCGTCTCGTCTAAGAGGCCGAGTTCTCTGAATATTGGAGCTCTGTTTACTTTGAATTCAGCCATTGGAAGGTCGGCCAAACCAGCAATCCTAGCTGCAATTGAAGAAGTTAATTCTGATTCAAGCGTTCTCGAGGGGACTAAATTGAACATTATTTTCCATGATACAAATTGCAGTGGATTTCTTGGAACTGTGGAAGCTTTGCAGCTCATTGAAAATGATGTGGTTGCTGCAATTGGCCCACAGTCCTCAGGAATAGCTCATGTCATATCCCACGTTGTTAATGAGCTCCATGTACCACTTCTGTCATTTGGAGCAACAGACCCCTCCCTTTCTGCTCTACAATACCCGTATTTTGTACGCACCACGCAGAGTGACTATTTTCAAATGTATGCAGTTGCTGATATGGTTGAGTATTTCGGATGGAGAGAAGTAATTGCCATATTTGTAGATGATGATTGTGGCAGAAATGGGATTTCAGTACTAGGTGATGCCTTAGCAAAGAAGCGTTCCAAGATTGCGTACAAGGCTGCCTTCTCTCCTGGAGCCCCATTAAGCGATATCAATGACTTGTTGGTGGGAGTAAACCTCATGGAATCTCGGGTGTATATTGTACATGTAAATCCTGACTCTGGTTTGTCAATCTTTTCTGTTGCCAAGGATCTTGGAATGATGACCAGTGGCTATGTTTGGATTGCAACAGATTGGCTTCCTACTAATTTAGATTCATTAGTACCACCTGACCCTGACAAAATGAATCTTTTACAAGGGGTTGTTGCTCTTCGTCATCATTCCCCGGATACTGATCTCAAAAAGAGTTTTGCATCTAAATGGAGCAAACTAAAGCATGAAGGGAGTTTGGGCTTCAATTCTTATGCTCTCTATGCCTATGACTCTATTTGGTTAGCAGCCCGTTCCCTTGATGTTTTTCTCAATGAAGGAGGGACTGTATCTTTCTCTAGTGACCCAAAGTTGAAAGATACAAATAGAAGCGCACTGCACTTAGCATCACTCCGAATATTTGATGGAGGCCAACGTTACCTGCAGACACTTCTTAAGATGAACTTCACAGGTGTGAGTGGTCAGCTTCAGTTTGATCTGGATAAGAATTTAATTCATCCAGCGTATGATGTTCTGAACATTGGTGGAACTGGATTTCGTAAAATTGGTTATTGGTCAAATTCTTCTGGTCTGTCGACCACCGAGCCAGAGACATTATATGGGAAGTCGTTCAATACTTCTACCAGAACTCCACATCTTTATAGTGTTATATGGCCTGGCGAAACTATAGCTACACCTCGGGGATGGGTATTTCCTAACAATGGCAGGCCACTACGTATTGCTGTGCCTGAGCGAGTAAGTTACAAAGATTTTGTGTCTAAAGACAAGAGTCCTCCTGGGGTCAGAGGATATTGTATTGATATATTTGAAGCTGCTATAAACTTGTTGCCTTATCCTGTGCCACGCACATATATGTTGTATGGAGATGGCAAGAGGAATCCCCAGTACACCGATCTTGTTGGTCAAGTTGCTCTCAATAACTTTGATGCAGCTGTTGGGGATGTTACAATAACTACAAATAGGACAAGAATGGTTGATTTTACACAGCCTTACATGGAATCAGGACTAGTTGTAGTTGTTCCTGTCAAACAGGTAAAATCAAACCCTTGGGCTTTCCTGAAGCCATTTACTATTGAGATGTGGTTAGTCACCGGTGCATTCTTCCTTCTTGTGGGAGTCGTTGTTTGGATTCTTGAGCACAGGATTAATCACGAGTTCCGTGGTCCACCAAGGGAACAGCTCATGACTATTTTTTGGTTAGTATGTTCTACATCATTAAGGCCTCTGATTTGTTTGAGACTTTCTGATTCATATAGTCATAAGGTGTCTTTCTGGAAAGAAAAATGCCCAAATTCCCTAATTGATGGACCTAGATGTTGCCTGGGTGTGGGGTGCCTATTAAATCACTTGGTGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006950 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009266 GO:0009409 GO:0009507 GO:0009536 GO:0009605 GO:0009611 GO:0009612 GO:0009628 GO:0009719 GO:0009987 GO:0010033 GO:0010034 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015276 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0033554 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070417 GO:0070588 GO:0070838 GO:0070887 GO:0071214 GO:0071229 GO:0071230 GO:0071236 GO:0071260 GO:0071310 GO:0071311 GO:0071417 GO:0071495 GO:0071496 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:0104004 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

693

Amino Acids

76.66

Weight (kDa)

6.96

Isoelectric Point (pI)

35.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	46 - 339	3.6e-18	Periplasmic binding protein
ANF_receptor	PF01094	61 - 417	1.5e-87	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	501 - 583	4.5e-11	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	599 - 645	3.4e-08	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT1G05200 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390 AT2G32390
fragaria_vesca	FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291 FvH4_6g43291
malus_domestica	MD09G1069900.v1.1 MD09G1070100.v1.1 MD09G1107700.v1.1 MD09G1108100.v1.1 MD17G1096100.v1.1
prunus_persica	Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1 Prupe.3G217900_v2.0.a1
pyrus_communis	pycom09g03000 pycom09g03030 pycom09g03050 pycom09g03070 pycom15g20430 pycom17g09220
rosa_chinensis	RchiOBHm_Chr1g0324131 RchiOBHm_Chr2g0159571 RchiOBHm_Chr2g0159581
rosa_laevigata	RLG00000021167
rosa_multiflora	Rmu_co8397097.1_g000001 Rmu_sc0004966.1_g000017 Rmu_sc0020031.1_g000001
rosa_roxburghii	Rroxscaffold_2G00090390
rosa_rugosa	Rorug02G0476900 Rorug02G0477000 Rorug02G0477100 Rorug02G0477200
rosa_samantha	Rh2AG544200 Rh2BG557000 Rh2CG527200 Rh2DG566000
rosa_wichuraiana	Rw2G044990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1152
AccB1I	GGYRCC	2 cut(s)	67, 2055
AccI	GTMKAC	1 cut(s)	1298
AclI	AACGTT	1 cut(s)	1138
AclWI	GGATC	1 cut(s)	771
AcoI	YGGCCR	1 cut(s)	177
AcsI	RAATTY	4 cut(s)	157, 1210, 1282, 2014
AcuI	CTGAAG	2 cut(s)	1175, 1802
AdeI	CACNNNGTG	1 cut(s)	2074
AfaI	GTAC	7 cut(s)	399, 462, 585, 626, 717, 837, 1610
AfiI	CCNNNNNNNGG	5 cut(s)	171, 734, 1424, 1834, 2050
AflII	CTTAAG	1 cut(s)	1157
AflIII	ACRYGT	1 cut(s)	718
AgeI	ACCGGT	1 cut(s)	1814
AhlI	ACTAGT	1 cut(s)	1729
AjnI	CCWGG	4 cut(s)	643, 1378, 1498, 2043
AleI	CACNNNNGTG	1 cut(s)	1175
Alw21I	GWGCWC	3 cut(s)	145, 393, 1863
Alw26I	GTCTC	3 cut(s)	112, 1307, 1954
AlwI	GGATC	1 cut(s)	771
AlwNI	CAGNNNCTG	1 cut(s)	503
Ama87I	CYCGRG	3 cut(s)	233, 702, 1401
AoxI	GGCC	8 cut(s)	6, 119, 177, 340, 1132, 1376, 1430, 1943
ApeKI	GCWGC	7 cut(s)	197, 307, 332, 632, 1010, 1535, 1652
ApoI	RAATTY	4 cut(s)	157, 1210, 1282, 2014
AseI	ATTAAT	1 cut(s)	1869
AsiGI	ACCGGT	1 cut(s)	1814
Asp700I	GAANNNNTTC	1 cut(s)	1331
AspLEI	GCGC	1 cut(s)	1097
AspS9I	GGNCC	3 cut(s)	341, 1886, 2030
AsuC2I	CCSGG	1 cut(s)	899
AsuHPI	GGTGA	2 cut(s)	602, 1804
AvaI	CYCGRG	3 cut(s)	233, 702, 1401
AvaII	GGWCC	2 cut(s)	1886, 2030
AxyI	CCTNAGG	1 cut(s)	352
BaeGI	GKGCMC	1 cut(s)	72
BanI	GGYRCC	2 cut(s)	67, 2055
BanII	GRGCYC	3 cut(s)	145, 393, 652
BauI	CACGAG	1 cut(s)	1874
Bbv12I	GWGCWC	3 cut(s)	145, 393, 1863
BbvI	GCAGC	7 cut(s)	184, 319, 319, 619, 1022, 1522, 1664
BccI	CCATC	6 cut(s)	76, 519, 1121, 1401, 1583, 2021
BciT130I	CCWGG	4 cut(s)	645, 1380, 1500, 2045
BciVI	GTATCC	1 cut(s)	895
BcnI	CCSGG	1 cut(s)	899
BcoDI	GTCTC	3 cut(s)	112, 1307, 1954
BcuI	ACTAGT	1 cut(s)	1729
BfaI	CTAG	5 cut(s)	194, 587, 1062, 1730, 2034
BfmI	CTRYAG	2 cut(s)	1145, 1389
BfrI	CTTAAG	1 cut(s)	1157
BfuAI	ACCTGC	1 cut(s)	1152
BfuI	GTATCC	1 cut(s)	895
BisI	GCNGC	7 cut(s)	198, 308, 333, 633, 1011, 1536, 1653
BlsI	GCNGC	7 cut(s)	199, 309, 334, 634, 1012, 1537, 1654
BmcAI	AGTACT	1 cut(s)	585
Bme1390I	CCNGG	5 cut(s)	645, 899, 1380, 1500, 2045
Bme18I	GGWCC	2 cut(s)	1886, 2030
BmeT110I	CYCGRG	3 cut(s)	233, 702, 1401
BmgT120I	GGNCC	3 cut(s)	341, 1886, 2030
BmiI	GGNNCC	3 cut(s)	69, 649, 2057
BmrFI	CCNGG	5 cut(s)	645, 899, 1380, 1500, 2045
BmrI	ACTGGG	1 cut(s)	1600
BmsI	GCATC	4 cut(s)	583, 935, 1118, 1639
BmuI	ACTGGG	1 cut(s)	1600
BoxI	GACNNNNGTC	1 cut(s)	1491
BplI	GAGNNNNNCTC	2 cut(s)	675, 707
BpmI	CTGGAG	1 cut(s)	666
Bpu10I	CCTNAGC	2 cut(s)	598, 1452
BpuEI	CTTGAG	1 cut(s)	1877
BpuMI	CCSGG	1 cut(s)	899
BsaAI	YACGTR	1 cut(s)	1439
BsaBI	GATNNNNATC	1 cut(s)	906
BsaJI	CCNNGG	9 cut(s)	72, 759, 897, 1400, 1499, 1769, 1882, 1892, 2044
BsaWI	WCCGGW	1 cut(s)	1814
BsaXI	ACNNNNNCTCC	6 cut(s)	1035, 1065, 1336, 1366, 1830, 1860
Bsc4I	CCNNNNNNNGG	5 cut(s)	171, 734, 1424, 1834, 2050
Bse118I	RCCGGY	1 cut(s)	1814
Bse1I	ACTGG	4 cut(s)	97, 780, 1258, 1606
Bse21I	CCTNAGG	1 cut(s)	352
Bse8I	GATNNNNATC	1 cut(s)	906
BseBI	CCWGG	4 cut(s)	645, 1380, 1500, 2045
BseDI	CCNNGG	9 cut(s)	72, 759, 897, 1400, 1499, 1769, 1882, 1892, 2044
BseGI	GGATG	4 cut(s)	530, 1219, 1412, 1669
BseJI	GATNNNNATC	1 cut(s)	906
BseLI	CCNNNNNNNGG	5 cut(s)	171, 734, 1424, 1834, 2050
BseMII	CTCAG	3 cut(s)	101, 366, 1443
BseNI	ACTGG	4 cut(s)	97, 780, 1258, 1606
BseSI	GKGCMC	1 cut(s)	72
BseXI	GCAGC	7 cut(s)	184, 319, 319, 619, 1022, 1522, 1664
BsgI	GTGCAG	1 cut(s)	1085
BshFI	GGCC	8 cut(s)	8, 121, 179, 342, 1134, 1378, 1432, 1945
BshNI	GGYRCC	2 cut(s)	67, 2055
BshTI	ACCGGT	1 cut(s)	1814
BsiHKAI	GWGCWC	3 cut(s)	145, 393, 1863
BsiHKCI	CYCGRG	3 cut(s)	233, 702, 1401
BsiSI	CCGG	2 cut(s)	899, 1815
BslFI	GGGAC	2 cut(s)	253, 1060
BslI	CCNNNNNNNGG	5 cut(s)	171, 734, 1424, 1834, 2050
BsmAI	GTCTC	3 cut(s)	112, 1307, 1954
BsmBI	CGTCTC	1 cut(s)	112
BsmFI	GGGAC	2 cut(s)	253, 1060
BsmI	GAATGC	1 cut(s)	1820
BsnI	GGCC	8 cut(s)	8, 121, 179, 342, 1134, 1378, 1432, 1945
BsoBI	CYCGRG	3 cut(s)	233, 702, 1401
Bsp1286I	GDGCHC	5 cut(s)	72, 145, 393, 652, 1863
Bsp1407I	TGTACA	1 cut(s)	715
Bsp143I	GATC	5 cut(s)	51, 763, 907, 1198, 1615
Bsp19I	CCATGG	1 cut(s)	72
BspANI	GGCC	8 cut(s)	8, 121, 179, 342, 1134, 1378, 1432, 1945
BspCNI	CTCAG	3 cut(s)	100, 365, 1444
BspHI	TCATGA	1 cut(s)	1905
BspLI	GGNNCC	3 cut(s)	69, 649, 2057
BspMAI	CTGCAG	1 cut(s)	1149
BspMI	ACCTGC	1 cut(s)	1152
BspPI	GGATC	1 cut(s)	771
BspQI	GCTCTTC	1 cut(s)	888
BspT107I	GGYRCC	2 cut(s)	67, 2055
BspTI	CTTAAG	1 cut(s)	1157
BsrFI	RCCGGY	1 cut(s)	1814
BsrGI	TGTACA	1 cut(s)	715
BsrI	ACTGG	4 cut(s)	97, 780, 1258, 1606
BssAI	RCCGGY	1 cut(s)	1814
BssECI	CCNNGG	9 cut(s)	72, 759, 897, 1400, 1499, 1769, 1882, 1892, 2044
BssMI	GATC	5 cut(s)	51, 763, 907, 1198, 1615
BssSI	CACGAG	1 cut(s)	1874
BssT1I	CCWWGG	4 cut(s)	72, 759, 1769, 1892
Bst2BI	CACGAG	1 cut(s)	1874
Bst2UI	CCWGG	4 cut(s)	645, 1380, 1500, 2045
Bst4CI	ACNGT	3 cut(s)	295, 348, 1051
Bst6I	CTCTTC	1 cut(s)	888
BstAFI	CTTAAG	1 cut(s)	1157
BstAUI	TGTACA	1 cut(s)	715
BstBAI	YACGTR	1 cut(s)	1439
BstC8I	GCNNGC	1 cut(s)	1430
BstDEI	CTNAG	6 cut(s)	87, 114, 352, 598, 1105, 1452
BstDSI	CCRYGG	2 cut(s)	72, 1882
BstF5I	GGATG	4 cut(s)	530, 1219, 1412, 1669
BstHHI	GCGC	1 cut(s)	1097
BstKTI	GATC	5 cut(s)	54, 766, 910, 1201, 1618
BstMAI	GTCTC	3 cut(s)	112, 1307, 1954
BstMBI	GATC	5 cut(s)	51, 763, 907, 1198, 1615
BstMWI	GCNNNNNNNGC	4 cut(s)	185, 194, 629, 986
BstNI	CCWGG	4 cut(s)	645, 1380, 1500, 2045
BstNSI	RCATGY	1 cut(s)	722
BstPAI	GACNNNNGTC	1 cut(s)	1491
BstSCI	CCNGG	5 cut(s)	643, 897, 1378, 1498, 2043
BstSFI	CTRYAG	2 cut(s)	1145, 1389
BstSLI	GKGCMC	1 cut(s)	72
BstSNI	TACGTA	1 cut(s)	1439
BstV1I	GCAGC	7 cut(s)	184, 319, 319, 619, 1022, 1522, 1664
BstX2I	RGATCY	1 cut(s)	763
BstYI	RGATCY	1 cut(s)	763
Bsu36I	CCTNAGG	1 cut(s)	352
BsuI	GTATCC	1 cut(s)	895
BsuRI	GGCC	8 cut(s)	8, 121, 179, 342, 1134, 1378, 1432, 1945
BtgI	CCRYGG	2 cut(s)	72, 1882
BtsCI	GGATG	4 cut(s)	530, 1219, 1412, 1669
BtsI	GCAGTG	3 cut(s)	38, 283, 1097
BtsIMutI	CAGTG	4 cut(s)	38, 283, 787, 1097
BveI	ACCTGC	1 cut(s)	1152
Cac8I	GCNNGC	1 cut(s)	1430
CaiI	CAGNNNCTG	1 cut(s)	503
CciI	TCATGA	1 cut(s)	1905
CfoI	GCGC	1 cut(s)	1097
Cfr10I	RCCGGY	1 cut(s)	1814
Cfr13I	GGNCC	3 cut(s)	341, 1886, 2030
Csp6I	GTAC	7 cut(s)	398, 461, 584, 625, 716, 836, 1609
CspAI	ACCGGT	1 cut(s)	1814
CviQI	GTAC	7 cut(s)	398, 461, 584, 625, 716, 836, 1609
DdeI	CTNAG	6 cut(s)	87, 114, 352, 598, 1105, 1452
DpnI	GATC	5 cut(s)	53, 765, 909, 1200, 1617
DpnII	GATC	5 cut(s)	51, 763, 907, 1198, 1615
DraIII	CACNNNGTG	1 cut(s)	2074
EaeI	YGGCCR	1 cut(s)	177
Eam1104I	CTCTTC	1 cut(s)	888
EarI	CTCTTC	1 cut(s)	888
Ecl136II	GAGCTC	2 cut(s)	143, 391
Eco105I	TACGTA	1 cut(s)	1439
Eco130I	CCWWGG	4 cut(s)	72, 759, 1769, 1892
Eco147I	AGGCCT	2 cut(s)	8, 1945
Eco24I	GRGCYC	3 cut(s)	145, 393, 652
Eco32I	GATATC	1 cut(s)	664
Eco47I	GGWCC	2 cut(s)	1886, 2030
Eco53kI	GAGCTC	2 cut(s)	143, 391
Eco57I	CTGAAG	2 cut(s)	1175, 1802
Eco81I	CCTNAGG	1 cut(s)	352
Eco88I	CYCGRG	3 cut(s)	233, 702, 1401
EcoICRI	GAGCTC	2 cut(s)	143, 391
EcoRI	GAATTC	1 cut(s)	157
EcoRII	CCWGG	4 cut(s)	643, 1378, 1498, 2043
EcoRV	GATATC	1 cut(s)	664
EcoT14I	CCWWGG	4 cut(s)	72, 759, 1769, 1892
EcoT38I	GRGCYC	3 cut(s)	145, 393, 652
ErhI	CCWWGG	4 cut(s)	72, 759, 1769, 1892
Esp3I	CGTCTC	1 cut(s)	112
FalI	AAGNNNNNCTT	4 cut(s)	620, 652, 1151, 1183
FaqI	GGGAC	2 cut(s)	253, 1060
FblI	GTMKAC	1 cut(s)	1298
Fnu4HI	GCNGC	7 cut(s)	198, 308, 333, 633, 1011, 1536, 1653
FokI	GGATG	4 cut(s)	537, 1206, 1419, 1676
FriOI	GRGCYC	3 cut(s)	145, 393, 652
Fsp4HI	GCNGC	7 cut(s)	198, 308, 333, 633, 1011, 1536, 1653
FspBI	CTAG	5 cut(s)	194, 587, 1062, 1730, 2034
GlaI	GCGC	1 cut(s)	1096
GluI	GCNGC	7 cut(s)	198, 308, 333, 633, 1011, 1536, 1653
GsuI	CTGGAG	1 cut(s)	666
HaeIII	GGCC	8 cut(s)	8, 121, 179, 342, 1134, 1378, 1432, 1945
HapII	CCGG	2 cut(s)	899, 1815
HhaI	GCGC	1 cut(s)	1097
Hin6I	GCGC	1 cut(s)	1095
HinP1I	GCGC	1 cut(s)	1095
HincII	GTYRAC	1 cut(s)	1299
HindII	GTYRAC	1 cut(s)	1299
HindIII	AAGCTT	1 cut(s)	300
HpaII	CCGG	2 cut(s)	899, 1815
HphI	GGTGA	2 cut(s)	602, 1804
Hpy166II	GTNNAC	5 cut(s)	150, 688, 1299, 1611, 1889
Hpy188I	TCNGA	9 cut(s)	90, 132, 220, 524, 1118, 1239, 1508, 1950, 1969
Hpy8I	GTNNAC	5 cut(s)	150, 688, 1299, 1611, 1889
HpyAV	CCTTC	6 cut(s)	19, 165, 646, 947, 1034, 1838
HpyCH4III	ACNGT	3 cut(s)	295, 348, 1051
HpyCH4IV	ACGT	3 cut(s)	378, 1138, 1438
HpyF10VI	GCNNNNNNNGC	4 cut(s)	185, 194, 629, 986
HpyF3I	CTNAG	6 cut(s)	87, 114, 352, 598, 1105, 1452
HpySE526I	ACGT	3 cut(s)	378, 1138, 1438
HspAI	GCGC	1 cut(s)	1095
Kzo9I	GATC	5 cut(s)	51, 763, 907, 1198, 1615
LguI	GCTCTTC	1 cut(s)	888
LmnI	GCTCC	5 cut(s)	140, 396, 416, 647, 936
Lsp1109I	GCAGC	7 cut(s)	184, 319, 319, 619, 1022, 1522, 1664
LweI	GCATC	4 cut(s)	583, 935, 1118, 1639
MaeI	CTAG	5 cut(s)	194, 587, 1062, 1730, 2034
MaeII	ACGT	3 cut(s)	378, 1138, 1438
MaeIII	GTNAC	6 cut(s)	476, 1064, 1139, 1463, 1666, 1810
MalI	GATC	5 cut(s)	53, 765, 909, 1200, 1617
MboI	GATC	5 cut(s)	51, 763, 907, 1198, 1615
MboII	GAAGA	4 cut(s)	218, 875, 1278, 1816
MfeI	CAATTG	2 cut(s)	201, 336
MflI	RGATCY	1 cut(s)	763
MhlI	GDGCHC	5 cut(s)	72, 145, 393, 652, 1863
MlyI	GAGTC	4 cut(s)	725, 989, 1501, 1848
MroXI	GAANNNNTTC	1 cut(s)	1331
MseI	TTAA	8 cut(s)	213, 384, 656, 1158, 1214, 1869, 1940, 2063
MslI	CAYNNNNRTG	4 cut(s)	77, 931, 1175, 1574
MspA1I	CMGCKG	1 cut(s)	1655
MspCI	CTTAAG	1 cut(s)	1157
MspI	CCGG	2 cut(s)	899, 1815
MspR9I	CCNGG	5 cut(s)	645, 899, 1380, 1500, 2045
MunI	CAATTG	2 cut(s)	201, 336
Mva1269I	GAATGC	1 cut(s)	1820
MvaI	CCWGG	4 cut(s)	645, 1380, 1500, 2045
MwoI	GCNNNNNNNGC	4 cut(s)	185, 194, 629, 986
NciI	CCSGG	1 cut(s)	899
NcoI	CCATGG	1 cut(s)	72
NdeII	GATC	5 cut(s)	51, 763, 907, 1198, 1615
NlaIV	GGNNCC	3 cut(s)	69, 649, 2057
NmeAIII	GCCGAG	1 cut(s)	147
NmuCI	GTSAC	3 cut(s)	476, 1064, 1810
NspI	RCATGY	1 cut(s)	722
OliI	CACNNNNGTG	1 cut(s)	1175
PaeR7I	CTCGAG	1 cut(s)	233
PagI	TCATGA	1 cut(s)	1905
PceI	AGGCCT	2 cut(s)	8, 1945
PciI	ACATGT	1 cut(s)	718
PciSI	GCTCTTC	1 cut(s)	888
PctI	GAATGC	1 cut(s)	1820
PdmI	GAANNNNTTC	1 cut(s)	1331
PfeI	GAWTC	8 cut(s)	221, 698, 827, 859, 1600, 1721, 1852, 1970
PfoI	TCCNGGA	1 cut(s)	643
PinAI	ACCGGT	1 cut(s)	1814
PkrI	GCNGC	7 cut(s)	199, 309, 334, 634, 1012, 1537, 1654
PleI	GAGTC	4 cut(s)	725, 989, 1500, 1847
PpsI	GAGTC	4 cut(s)	725, 989, 1500, 1847
Ppu21I	YACGTR	1 cut(s)	1439
PscI	ACATGT	1 cut(s)	718
PshAI	GACNNNNGTC	1 cut(s)	1491
PshBI	ATTAAT	1 cut(s)	1869
Psp124BI	GAGCTC	2 cut(s)	145, 393
Psp1406I	AACGTT	1 cut(s)	1138
Psp6I	CCWGG	4 cut(s)	643, 1378, 1498, 2043
PspGI	CCWGG	4 cut(s)	643, 1378, 1498, 2043
PspN4I	GGNNCC	3 cut(s)	69, 649, 2057
PspPI	GGNCC	3 cut(s)	341, 1886, 2030
PsrI	GAACNNNNNNTAC	2 cut(s)	28, 60
PstI	CTGCAG	1 cut(s)	1149
PstNI	CAGNNNCTG	1 cut(s)	503
PsuI	RGATCY	1 cut(s)	763
PvuII	CAGCTG	1 cut(s)	1655
RsaI	GTAC	7 cut(s)	399, 462, 585, 626, 717, 837, 1610
RsaNI	GTAC	7 cut(s)	398, 461, 584, 625, 716, 836, 1609
RseI	CAYNNNNRTG	4 cut(s)	77, 931, 1175, 1574
SacI	GAGCTC	2 cut(s)	145, 393
SalI	GTCGAC	1 cut(s)	1297
SapI	GCTCTTC	1 cut(s)	888
SaqAI	TTAA	8 cut(s)	213, 384, 656, 1158, 1214, 1869, 1940, 2063
SatI	GCNGC	7 cut(s)	198, 308, 333, 633, 1011, 1536, 1653
Sau3AI	GATC	5 cut(s)	51, 763, 907, 1198, 1615
Sau96I	GGNCC	3 cut(s)	341, 1886, 2030
ScaI	AGTACT	1 cut(s)	585
SchI	GAGTC	4 cut(s)	725, 989, 1501, 1848
ScrFI	CCNGG	5 cut(s)	645, 899, 1380, 1500, 2045
SduI	GDGCHC	5 cut(s)	72, 145, 393, 652, 1863
SfaNI	GCATC	4 cut(s)	583, 935, 1118, 1639
SfcI	CTRYAG	2 cut(s)	1145, 1389
Sfr274I	CTCGAG	1 cut(s)	233
SgrAI	CRCCGGYG	1 cut(s)	1814
SinI	GGWCC	2 cut(s)	1886, 2030
SlaI	CTCGAG	1 cut(s)	233
SmiMI	CAYNNNNRTG	4 cut(s)	77, 931, 1175, 1574
SmlI	CTYRAG	3 cut(s)	233, 1157, 1856
SmoI	CTYRAG	3 cut(s)	233, 1157, 1856
SnaBI	TACGTA	1 cut(s)	1439
SpeI	ACTAGT	1 cut(s)	1729
SseBI	AGGCCT	2 cut(s)	8, 1945
SspI	AATATT	2 cut(s)	136, 1122
SspMI	CTAG	5 cut(s)	194, 587, 1062, 1730, 2034
SstI	GAGCTC	2 cut(s)	145, 393
StuI	AGGCCT	2 cut(s)	8, 1945
StyD4I	CCNGG	5 cut(s)	643, 897, 1378, 1498, 2043
StyI	CCWWGG	4 cut(s)	72, 759, 1769, 1892
TaaI	ACNGT	3 cut(s)	295, 348, 1051
TaiI	ACGT	3 cut(s)	381, 1141, 1441
TaqI	TCGA	2 cut(s)	234, 1298
TatI	WGTACW	3 cut(s)	583, 715, 1608
TfiI	GAWTC	8 cut(s)	221, 698, 827, 859, 1600, 1721, 1852, 1970
Tru1I	TTAA	8 cut(s)	213, 384, 656, 1158, 1214, 1869, 1940, 2063
Tru9I	TTAA	8 cut(s)	213, 384, 656, 1158, 1214, 1869, 1940, 2063
TscAI	CASTG	4 cut(s)	45, 283, 787, 1104
TseFI	GTSAC	3 cut(s)	476, 1064, 1810
TseI	GCWGC	7 cut(s)	197, 307, 332, 632, 1010, 1535, 1652
Tsp45I	GTSAC	3 cut(s)	476, 1064, 1810
TspDTI	ATGAA	7 cut(s)	819, 872, 966, 1053, 1178, 1208, 1962
TspGWI	ACGGA	1 cut(s)	1871
TspRI	CASTG	4 cut(s)	45, 283, 787, 1104
Vha464I	CTTAAG	1 cut(s)	1157
VpaK11BI	GGWCC	2 cut(s)	1886, 2030
VspI	ATTAAT	1 cut(s)	1869
XapI	RAATTY	4 cut(s)	157, 1210, 1282, 2014
XceI	RCATGY	1 cut(s)	722
XcmI	CCANNNNNNNNNTGG	1 cut(s)	79
XhoI	CTCGAG	1 cut(s)	233
XmiI	GTMKAC	1 cut(s)	1298
XmnI	GAANNNNTTC	1 cut(s)	1331
XspI	CTAG	5 cut(s)	194, 587, 1062, 1730, 2034
ZrmI	AGTACT	1 cut(s)	585

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.