FvH4_6g45191

DUF21 domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
34728684 .. 34729238
555 bp
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UTR
Exon/CDS
Intron
FvH4_6g45191.t1

Sequence Viewer

Length: 249 bp
ATGGTCCGAAAGCGATTGAGTTATGGGGCTGAGAGCAGAAGAGAGCTTTTCAAAGTTTTAAAGAAGGCGGTGGAGTATGAGTGCTGCAGTAGCGGCTTCTTCAGTGCTACAGTAGTCTACTATCCTATTGCATATCCAATTAGCAAGCTATTAGCCTATCTTCTCGACCACGGGCATGTAGCTCTGTTTCGCAGAGCGGAGTTAAAAACATTTGTAGATTTTCATGGCAATGAGGCTGGAAAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

83

Amino Acids

9.35

Weight (kDa)

9.39

Isoelectric Point (pI)

27.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 197
AccI GTMKAC 1 cut(s) 117
AciI CCGC 3 cut(s) 68, 93, 197
AcuI CTGAAG 1 cut(s) 85
AgsI TTSAA 1 cut(s) 52
AluBI AGCT 3 cut(s) 46, 148, 182
AluI AGCT 3 cut(s) 46, 148, 182
ApeKI GCWGC 1 cut(s) 84
AspS9I GGNCC 1 cut(s) 4
AvaII GGWCC 1 cut(s) 4
BbvI GCAGC 1 cut(s) 71
BfmI CTRYAG 2 cut(s) 85, 108
BisI GCNGC 2 cut(s) 85, 94
BlsI GCNGC 2 cut(s) 86, 95
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BsaJI CCNNGG 1 cut(s) 169
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bse3DI GCAATG 1 cut(s) 235
BseDI CCNNGG 1 cut(s) 169
BseMI GCAATG 1 cut(s) 235
BseMII CTCAG 1 cut(s) 21
BseXI GCAGC 1 cut(s) 71
BspACI CCGC 3 cut(s) 68, 93, 197
BspCNI CTCAG 1 cut(s) 22
BspMAI CTGCAG 1 cut(s) 89
BsrBI CCGCTC 1 cut(s) 197
BsrDI GCAATG 1 cut(s) 235
BssECI CCNNGG 1 cut(s) 169
Bst4CI ACNGT 1 cut(s) 112
Bst6I CTCTTC 1 cut(s) 34
BstC8I GCNNGC 1 cut(s) 146
BstDEI CTNAG 1 cut(s) 30
BstDSI CCRYGG 1 cut(s) 169
BstMWI GCNNNNNNNGC 2 cut(s) 90, 93
BstNSI RCATGY 1 cut(s) 179
BstSFI CTRYAG 2 cut(s) 85, 108
BstV1I GCAGC 1 cut(s) 71
BtgI CCRYGG 1 cut(s) 169
BtsIMutI CAGTG 1 cut(s) 109
Cac8I GCNNGC 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 4
CviAII CATG 2 cut(s) 176, 224
CviJI RGCY 7 cut(s) 29, 46, 96, 148, 155, 182, 236
CviKI_1 RGCY 7 cut(s) 29, 46, 96, 148, 155, 182, 236
DdeI CTNAG 1 cut(s) 30
DraI TTTAAA 1 cut(s) 60
Eam1104I CTCTTC 1 cut(s) 34
EarI CTCTTC 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 4
Eco57I CTGAAG 1 cut(s) 85
FaeI CATG 2 cut(s) 179, 227
FaiI YATR 5 cut(s) 24, 78, 133, 177, 225
FatI CATG 2 cut(s) 175, 223
FblI GTMKAC 1 cut(s) 117
Fnu4HI GCNGC 2 cut(s) 85, 94
Fsp4HI GCNGC 2 cut(s) 85, 94
GluI GCNGC 2 cut(s) 85, 94
Hin1II CATG 2 cut(s) 179, 227
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 1 cut(s) 8
Hpy188III TCNNGA 1 cut(s) 164
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 1 cut(s) 58
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4V TGCA 2 cut(s) 87, 131
HpyF10VI GCNNNNNNNGC 2 cut(s) 90, 93
HpyF3I CTNAG 1 cut(s) 30
Hsp92II CATG 2 cut(s) 179, 227
LpnPI CCDG 1 cut(s) 222
Lsp1109I GCAGC 1 cut(s) 71
MbiI CCGCTC 1 cut(s) 197
MboII GAAGA 3 cut(s) 51, 91, 152
MluCI AATT 1 cut(s) 138
MnlI CCTC 1 cut(s) 226
MseI TTAA 2 cut(s) 59, 203
MslI CAYNNNNRTG 2 cut(s) 174, 228
MwoI GCNNNNNNNGC 2 cut(s) 90, 93
NlaIII CATG 2 cut(s) 179, 227
NspI RCATGY 1 cut(s) 179
PkrI GCNGC 2 cut(s) 86, 95
PspPI GGNCC 1 cut(s) 4
PstI CTGCAG 1 cut(s) 89
RseI CAYNNNNRTG 2 cut(s) 174, 228
SaqAI TTAA 2 cut(s) 59, 203
SatI GCNGC 2 cut(s) 85, 94
Sau96I GGNCC 1 cut(s) 4
SetI ASST 4 cut(s) 48, 150, 184, 247
SfcI CTRYAG 2 cut(s) 85, 108
SgeI CNNG 6 cut(s) 157, 176, 182, 184, 188, 236
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 2 cut(s) 174, 228
Sse9I AATT 1 cut(s) 138
SsiI CCGC 3 cut(s) 68, 93, 197
TaaI ACNGT 1 cut(s) 112
TaqI TCGA 1 cut(s) 165
TasI AATT 1 cut(s) 138
TauI GCSGC 1 cut(s) 96
Tru1I TTAA 2 cut(s) 59, 203
Tru9I TTAA 2 cut(s) 59, 203
TscAI CASTG 1 cut(s) 109
TseI GCWGC 1 cut(s) 84
TspDTI ATGAA 1 cut(s) 212
TspRI CASTG 1 cut(s) 109
VpaK11BI GGWCC 1 cut(s) 4
XceI RCATGY 1 cut(s) 179
XmiI GTMKAC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.