Rh4CG442300

DUF21 domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
67889164 .. 67891310
2147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG442300.1

Sequence Viewer

Length: 243 bp
ATGGGAGAACAAGAATCCAAATCTGTTGGACAATTTAGAGGTAAAGTTTGTGTGAGCTTTAAGTTTCACAAAAGAATGTACCTAACGGTTATTCCACAAGCAATATGCATCAGATATGGACTTGTTGTGGGTTCCAACTTTGTATGGCTTGTCCGAATTTTGATGATTATTTGCTACCCAATTGCTTATTCAATTGGAAAGTTTAAAGCCCCCGTCTCCATCCAAAGCAAAGAGGTAAAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

9.12

Weight (kDa)

9.9

Isoelectric Point (pI)

27.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 156
AfaI GTAC 1 cut(s) 80
AgsI TTSAA 1 cut(s) 192
AjuI GAANNNNNNNTTGG 2 cut(s) 172, 204
AluBI AGCT 1 cut(s) 57
AluI AGCT 1 cut(s) 57
Alw26I GTCTC 1 cut(s) 220
ApoI RAATTY 1 cut(s) 156
BccI CCATC 1 cut(s) 227
BcoDI GTCTC 1 cut(s) 220
BmiI GGNNCC 1 cut(s) 133
BmsI GCATC 1 cut(s) 117
BseGI GGATG 1 cut(s) 219
BsmAI GTCTC 1 cut(s) 220
BsmBI CGTCTC 1 cut(s) 220
BspLI GGNNCC 1 cut(s) 133
Bst4CI ACNGT 1 cut(s) 88
BstF5I GGATG 1 cut(s) 219
BstMAI GTCTC 1 cut(s) 220
BtsCI GGATG 1 cut(s) 219
Csp6I GTAC 1 cut(s) 79
CviJI RGCY 3 cut(s) 57, 148, 209
CviKI_1 RGCY 3 cut(s) 57, 148, 209
CviQI GTAC 1 cut(s) 79
DraI TTTAAA 1 cut(s) 205
EcoT22I ATGCAT 1 cut(s) 110
Esp3I CGTCTC 1 cut(s) 220
FaiI YATR 3 cut(s) 106, 117, 145
FokI GGATG 1 cut(s) 206
HinfI GANTC 1 cut(s) 14
Hpy188I TCNGA 2 cut(s) 113, 155
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4V TGCA 1 cut(s) 108
LweI GCATC 1 cut(s) 117
MfeI CAATTG 2 cut(s) 180, 192
MluCI AATT 4 cut(s) 32, 156, 180, 192
MmeI TCCRAC 2 cut(s) 7, 159
MnlI CCTC 2 cut(s) 32, 226
Mph1103I ATGCAT 1 cut(s) 110
MseI TTAA 2 cut(s) 60, 204
MunI CAATTG 2 cut(s) 180, 192
NlaIV GGNNCC 1 cut(s) 133
NsiI ATGCAT 1 cut(s) 110
PfeI GAWTC 1 cut(s) 14
PspN4I GGNNCC 1 cut(s) 133
RsaI GTAC 1 cut(s) 80
RsaNI GTAC 1 cut(s) 79
SaqAI TTAA 2 cut(s) 60, 204
SetI ASST 4 cut(s) 43, 59, 84, 237
SfaNI GCATC 1 cut(s) 117
SgeI CNNG 5 cut(s) 23, 110, 134, 161, 224
Sse9I AATT 4 cut(s) 32, 156, 180, 192
TaaI ACNGT 1 cut(s) 88
TasI AATT 4 cut(s) 32, 156, 180, 192
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 2 cut(s) 60, 204
Tru9I TTAA 2 cut(s) 60, 204
XapI RAATTY 1 cut(s) 156
Zsp2I ATGCAT 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.