FvH4_7g01950

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
2324478 .. 2332256
7779 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g01950.t4

Sequence Viewer

Length: 4299 bp
ATGCCTATTGTTCGAGCATTTGAATCTGCTTCTGTAAGCATCCTCCTTAACAAGTTGGCCACTCAAGATGTCATAAATTTCTTCCTCAAGTGGGGAATCGATGACTCGCTGCGAGCAAAGCTCAAGAGCAACCTGCTTGTCATTCATGCAGTTCTCAATCATGCTGAGGAGAAGCAAGTCCAGGACTTGAGTGTCAAAGCTTGGCTTGAGGATGTCAGAGTTGCAGCTTATGATGCTGAGGACATATTGGATGATATCGCGAATGATGCCCTCGAATCACAAAACAGCAAACATGAGGTATGGATTTCTAAGATCAAAGAAGGGATAGACTTTAAAATCAAAGACATTGCTGATACTCTTAATCCTTTTAGAGAACGTGTAGAGTCGAAAATGATAAAGATTATAGATATTTTGGAAGAGCTTGCAAAACAGAAAGATATTCTTTGTTTGAGAGAAGATTCTGGAGGTGTAAAATCAGGGTTTGAAAGATCACCCACAACAACGATGTTGGGTGATGAATCTCATATTTATGGTAGGGAATTTGATAAGGAGGAGATAATTACTTTGCTGAAGTTGGGTGAAAGTGATGATGAGGTTTCTATTATTCCAATTGTAGGCATGGGGGGCATTGGGAAGACCACACTTGCTCAGCTTGTGTATAATGATGTTAATGTAAGTAGCAAGTTTGATTTGAAAGCTTGGGCGTGTGTCTCTGATGTGTTTGATGTGCAAAGGATAACAAAAGCACTTGTTGAGTCCGCGACTAAAGGAAGTTGTAGCACAAACAATTTGGAGTTACTTCAAGAACAACTGAAAAAGTGGTTGAAGAACAAGAAATTTCTTTTTGTTCTGGATGATGGCTGGAACGAGAAGTATGAAAGCTGGGATAAGTTAAGAGTCCCCTTCACAGTTGGTGCACTAGGGAGTAAAATTATAATCACGACACGAAGCAAAACAGTTGCATCACTTATGGGGACTGTTCCTACTTACTGTTTGGAGGGGCTTTCAGATGGTGATTGTTGGTTACTATTTGAACAAATTGTTTTTCGGAACAGGAATTTAGATTCCTATCCAAAGTTGAAAGTGATCGGCAAGAAAATAGTAGACGAGTGTAAAGGGTTGCCTTTGGCTGCAAAGGCACTAGGAGGCCTCCTGCGTGCCGAACCAGAACTTGATGAGAATTACTGGAATGATATCTTGAATAGCAAAATTTGGAAGCTGGCAGACAACAATATTTTACCAGCTCTAAGATTAAGCTACCATCACCTCCCTGAGGATTTGAAGCGGTGCTTTGCTTATTGCTCAATGTTTCCTAAGGACTATGAATATGACAGAGAGATGCTGATCTTGTTATGGATGGCAGAGGGTTTTGTGCCAGAGCCAGAAGGAAATCAGCAAATCGAAGATGTAGCAAGAAGATATGTTTCAGATTTTTTATCAAGGTCCTTCTTCCAACACACCAATGACAAGTTACGACTGGTAATGCATGACCTCATACATGATCTTGCACAATCTGTGTCTGGAAAAACATTTGTTAGGTTGGAGGAAAATACAGAGAATCATAACAAGTCTACAAAAGCTCGGCACTTATCATATACTCGTGGATTTAATGATGTATTTCAGAAATTCGAGGCTTTCAGTAATGTGGATTGTTTACGGACCTTTCTACCATTAGACCCGTTGCAAGGATTTTCTATGGGTAGCTTGACTGACAAGGTTCCTTGTGATATGATGCCAAAATTAAGATTCTTGCGGGTGCTATCCTTTAGTGGTTATCTCATAGAAAAGTTGCCAGATTCAATTGGCAGTTTGAAACAACTACGGTACCTCAATCTTTCTCATTGTCAAATAGAAGAGCTACCTGAGTCAACAAGCAGTCTATACAATCTGCAGACATTACTTTTATTCAGATGTTGTTCGCTTACCAGGCTGCCTGCAAACATGGGAAACCTAAGGAATTTACGGCATCTCAATATTGAGGGAACTAAGCTGAAAAGTATGCCTTTGGGAATGGGAAGATTGATTAACCTTCAAATACTGTCAGATTTCATTGTGGGGAAAGCCATGGGAAAGGGGATTGCAGAATTCAAGGACTTGTCACATCTTCGAGGATCCATTTCTATTTTGTGTTTGCATAATGTCGACAGTGTTAGAGATGCAATTGTGGCCAGATTGAAGGATAAGAAGCACCTGGATGATTTGGTTTTGGAATGGAGCAGCAGTAGTGATGGTTCACGAAATGAAGGGATCGAGACAGAAGTACTTGATGCACTGCAGCCTCATGAAAATCTGAAGAAACTCACCATCAAGTATTATGGAGGTACTGAATTCCCATATTGGATGGGAGATCCTTTCTTCACTAACATGGTGTACTTACATCTCTATGGTTGCGCAAAATGCACATCGTTACCACCCCTTGGCCAACTACCTTCTCTTAAAGATCTCATACTTGAAGCAAAGCATGGAATAAAACATGTAGGAATCGAATTTTTTGTGGATGATGATGGTTCCAGAATCTGTTTCCCCTCTTTGGAGACTTTGAAATTTGAGGACATGGAAGAATGGGAGGAATGGTCTTCAGATGAAAGGCGTAAAGAATTTCCCAGCCTTCGGGTGCTTTGCATTTTCAGATGTCCCAAGTTAACAAAGTTTTCACATGGATTTGCCTCTCTAGAAAAGCTGCGCATCAGGAAGTGCGGAGCACTGACTACCTTCTCACAGAACCCTGCACTTGGGAATTTGGAACCTGTAGATTTCCGTAGCCTGCAACTGCTTGTTCTTGTTGGTTGTGGTGAGCTTGAAAACCTTCCTTTTTCCCTCCCTTCGTTGAAAGTGCTTGAGATAGATGGTTGCGAAATACTGGCTGCACTTCCAAGGATGGTGGAACTTAGCACAATGTACCTGATGGATTCAAATGCTGAATTACTTGGATGGATGATGAGATTCAGCTCGCTGACCTCTCTTCACCTAACTCATATTCCACATGTGAAGTGTCTACCTGAAGGCTTTATCCAACAGTCTGAAAAACTTGAAGAACTGAGTCTTTCAGGCTTTCCTGACCTTGAATATTTGGTAGATGACCAAGTTGGACTAGCACACCTTGCATCGCTTCAACGCTTGACAATATCCCATTGTCCTGAGTTAGTTGCTTTACCTGATGAAGTTGATAAGCTTCCACCTGTACTTCAATATTTGGATTTGAAACATTGTCGTAGCCTGATGAAGCTGCCGGGTAAGCTTCACAACCTTGAGTGTCTTGCAGAGCTGCAGATTGAATGGTGTTCAAACATTGAAGCATTTCCAGATGTGGGTTTGCCTGACAAACTGAAGCGTCTTGTAATCCGTGACTGTGGTGCTCTGAAGACCCTTCCTCAGGAGATTCTCCGCAATAACAACTTTCTCGAGTATTTAGAAGTTCATAAATGTCCTTCTCTTGTGTCCATTCTTGAAGAAGGAAATTTGCCATCCACTCTGACACATATGAGAGTTTACTATTGCAAAACCCTAAGATCACTGCCTGAGGGTTTGATGTGCAAAGACAATATGACTCTCAAGTACTTGGAGATAGACAACTGTTCCTCTCTCATGATCTTTCCAAATGGTGAATCACCAACAACCCTTGAGCGTCTTGAGATTAGTGATTGCTCTAATTTGCAGGCATTGCCACTGAGCCTTCTCAACCTCATAAATCTTGAGACCTTGGCAGTAAAGAGCTGCCCCCTTCTTCAGTGCTTTCCAAAGGGTGGGTTGCCTTCCAACACAAAGTTTGTCACAATTTCCGAATGTGAGATTCTCCAGTCTCTACCTGAATTGTTTCATAAACTCAAACGTCTTCAGAAGTTGGAGATTTCTAGCTGTCCTAGTCTCCTGTCCTTGCCAAAGCAGGGTCTGCCTAGCAGCTTAAGAGATCTTAAAGTTACTGATTGTGAAAAGCTTAATCCCATGCATCAGTGGAAACTTCACAAACTATCCTCTCTAGATGTTTTCATCATTGGTGGATTTCCTGGCCTGAAGTCCTTTTTGAAAGATTATCCTCTTCCCCACACTTCAACCTCTTTAAGCATTCAAAGACTCCCAGATCTTGAATCCATATCGGAGGTGCTTGAGAATCTCACCTCACTTGAAAAGCTGACTATCAGGGAGTGCGATAAGCTCCAATCTTTGCCAGAGACCGGACTACCAGCAACGATTTCTGCCTTAACAATTCAGAATTGTTCACTTCTAAAACATCGTTGTGGAAAAGACAAAGGAGAAGACTGGTCCAAGATAAAAAACATCCCCTTCGTGAGTATATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1433

Amino Acids

162.16

Weight (kDa)

5.8

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 96 - 257 2.1e-34 NB-ARC domain
WHD_DRP PF23559 341 - 408 1.2e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 482 - 760 4.9e-31 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 598 - 723 8.1e-40 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 935
AasI GACNNNNNNGTC 1 cut(s) 191
Acc16I TGCGCA 2 cut(s) 2392, 2684
Acc36I ACCTGC 1 cut(s) 141
Acc65I GGTACC 1 cut(s) 1824
AccB1I GGYRCC 1 cut(s) 1824
AccB7I CCANNNNNTGG 2 cut(s) 2417, 3743
AccI GTMKAC 4 cut(s) 1104, 1571, 2142, 2995
AccII CGCG 2 cut(s) 260, 761
AciI CCGC 5 cut(s) 759, 1285, 1753, 2697, 3385
AclWI GGATC 4 cut(s) 2106, 2119, 2255, 2342
AcoI YGGCCR 3 cut(s) 57, 2166, 2419
AcuI CTGAAG 9 cut(s) 590, 2312, 2562, 3021, 3347, 3380, 3710, 3818, 4031
AfaI GTAC 7 cut(s) 1826, 2262, 2323, 2372, 2900, 3183, 3557
AflII CTTAAG 1 cut(s) 3901
AflIII ACRYGT 3 cut(s) 376, 2473, 2983
AjnI CCWGG 4 cut(s) 180, 1925, 2190, 4003
Alw21I GWGCWC 3 cut(s) 919, 2704, 3358
Alw26I GTCTC 7 cut(s) 715, 2246, 2528, 3689, 3804, 3869, 4163
Alw44I GTGCAC 1 cut(s) 915
AlwI GGATC 4 cut(s) 2106, 2119, 2255, 2342
AlwNI CAGNNNCTG 2 cut(s) 2517, 3889
Ama87I CYCGRG 1 cut(s) 3401
AoxI GGCC 5 cut(s) 57, 1147, 2166, 2419, 4006
ApaLI GTGCAC 1 cut(s) 915
Asp700I GAANNNNTTC 3 cut(s) 2805, 3297, 3813
Asp718I GGTACC 1 cut(s) 1824
AspLEI GCGC 2 cut(s) 2393, 2685
AspS9I GGNCC 3 cut(s) 1443, 1659, 4260
AsuC2I CCSGG 1 cut(s) 3231
AvaI CYCGRG 1 cut(s) 3401
AvaII GGWCC 3 cut(s) 1443, 1659, 4260
AxyI CCTNAGG 5 cut(s) 1272, 1314, 1952, 3372, 3519
BaeGI GKGCMC 1 cut(s) 919
BaeI ACNNNNGTAYC 2 cut(s) 1808, 1841
BalI TGGCCA 3 cut(s) 59, 2168, 2421
BamHI GGATCC 1 cut(s) 2111
BanI GGYRCC 1 cut(s) 1824
BauI CACGAG 1 cut(s) 1599
BbsI GAAGAC 5 cut(s) 641, 2568, 3368, 3824, 4260
Bbv12I GWGCWC 3 cut(s) 919, 2704, 3358
BbvCI CCTCAGC 2 cut(s) 165, 237
BceAI ACGGC 1 cut(s) 1979
BciT130I CCWGG 4 cut(s) 182, 1927, 2192, 4005
BcnI CCSGG 1 cut(s) 3231
BcoDI GTCTC 7 cut(s) 715, 2246, 2528, 3689, 3804, 3869, 4163
BfaI CTAG 8 cut(s) 920, 1142, 2672, 3092, 3852, 3861, 3894, 3977
BfmI CTRYAG 4 cut(s) 1889, 2273, 2748, 3266
BfrI CTTAAG 1 cut(s) 3901
BfuAI ACCTGC 1 cut(s) 141
BglII AGATCT 3 cut(s) 2440, 3907, 4078
BlpI GCTNAGC 1 cut(s) 648
BmcAI AGTACT 2 cut(s) 2262, 3557
Bme1390I CCNGG 5 cut(s) 182, 1927, 2192, 3231, 4005
Bme18I GGWCC 3 cut(s) 1443, 1659, 4260
BmeT110I CYCGRG 1 cut(s) 3401
BmgT120I GGNCC 3 cut(s) 1443, 1659, 4260
BmiI GGNNCC 5 cut(s) 1719, 1826, 2113, 2509, 2745
BmrFI CCNGG 5 cut(s) 182, 1927, 2192, 3231, 4005
BpiI GAAGAC 5 cut(s) 641, 2568, 3368, 3824, 4260
BplI GAGNNNNNCTC 2 cut(s) 105, 137
BpmI CTGGAG 2 cut(s) 483, 3779
Bpu10I CCTNAGC 2 cut(s) 165, 237
Bpu1102I GCTNAGC 1 cut(s) 648
BpuMI CCSGG 1 cut(s) 3231
Bsa29I ATCGAT 1 cut(s) 99
BsaBI GATNNNNATC 2 cut(s) 1068, 1343
BsaI GGTCTC 2 cut(s) 3689, 4163
BsaJI CCNNGG 4 cut(s) 2064, 2416, 2873, 3699
BsaWI WCCGGW 1 cut(s) 4172
BsaXI ACNNNNNCTCC 4 cut(s) 2206, 2236, 2558, 2588
Bse1I ACTGG 5 cut(s) 1190, 1482, 2865, 3796, 4262
Bse21I CCTNAGG 5 cut(s) 1272, 1314, 1952, 3372, 3519
Bse3DI GCAATG 2 cut(s) 345, 3659
Bse8I GATNNNNATC 2 cut(s) 1068, 1343
BseBI CCWGG 4 cut(s) 182, 1927, 2192, 4005
BseCI ATCGAT 1 cut(s) 99
BseDI CCNNGG 4 cut(s) 2064, 2416, 2873, 3699
BseJI GATNNNNATC 2 cut(s) 1068, 1343
BseMI GCAATG 2 cut(s) 345, 3659
BseNI ACTGG 5 cut(s) 1190, 1482, 2865, 3796, 4262
BseRI GAGGAG 2 cut(s) 182, 566
BseSI GKGCMC 1 cut(s) 919
BseYI CCCAGC 2 cut(s) 882, 2603
BsgI GTGCAG 2 cut(s) 2712, 2850
Bsh1236I CGCG 2 cut(s) 260, 761
BshFI GGCC 5 cut(s) 59, 1149, 2168, 2421, 4008
BshNI GGYRCC 1 cut(s) 1824
BshVI ATCGAT 1 cut(s) 99
BsiHKAI GWGCWC 3 cut(s) 919, 2704, 3358
BsiHKCI CYCGRG 1 cut(s) 3401
BsiSI CCGG 2 cut(s) 3230, 4173
BslFI GGGAC 3 cut(s) 884, 988, 2619
BsmAI GTCTC 7 cut(s) 715, 2246, 2528, 3689, 3804, 3869, 4163
BsmFI GGGAC 3 cut(s) 884, 988, 2619
BsmI GAATGC 1 cut(s) 4062
BsnI GGCC 5 cut(s) 59, 1149, 2168, 2421, 4008
Bso31I GGTCTC 2 cut(s) 3689, 4163
BsoBI CYCGRG 1 cut(s) 3401
Bsp1286I GDGCHC 3 cut(s) 919, 2704, 3358
Bsp1720I GCTNAGC 1 cut(s) 648
Bsp19I CCATGG 1 cut(s) 2064
Bsp68I TCGCGA 1 cut(s) 260
BspACI CCGC 5 cut(s) 759, 1285, 1753, 2697, 3385
BspANI GGCC 5 cut(s) 59, 1149, 2168, 2421, 4008
BspDI ATCGAT 1 cut(s) 99
BspFNI CGCG 2 cut(s) 260, 761
BspHI TCATGA 2 cut(s) 2281, 3585
BspLI GGNNCC 5 cut(s) 1719, 1826, 2113, 2509, 2745
BspMAI CTGCAG 3 cut(s) 1893, 2277, 3270
BspMI ACCTGC 1 cut(s) 141
BspPI GGATC 4 cut(s) 2106, 2119, 2255, 2342
BspQI GCTCTTC 2 cut(s) 411, 1848
BspT107I GGYRCC 1 cut(s) 1824
BspTI CTTAAG 1 cut(s) 3901
BspTNI GGTCTC 2 cut(s) 3689, 4163
BsrDI GCAATG 2 cut(s) 345, 3659
BsrI ACTGG 5 cut(s) 1190, 1482, 2865, 3796, 4262
BssECI CCNNGG 4 cut(s) 2064, 2416, 2873, 3699
BssSI CACGAG 1 cut(s) 1599
BssT1I CCWWGG 4 cut(s) 2064, 2416, 2873, 3699
Bst2BI CACGAG 1 cut(s) 1599
Bst2UI CCWGG 4 cut(s) 182, 1927, 2192, 4005
Bst6I CTCTTC 4 cut(s) 411, 1848, 2967, 4041
BstAFI CTTAAG 1 cut(s) 3901
BstAPI GCANNNNNTGC 3 cut(s) 3101, 3661, 3889
BstC8I GCNNGC 8 cut(s) 114, 423, 1158, 1221, 1935, 2765, 2951, 3657
BstDSI CCRYGG 1 cut(s) 2064
BstENI CCTNNNNNAGG 2 cut(s) 1271, 3371
BstFNI CGCG 2 cut(s) 260, 761
BstHHI GCGC 2 cut(s) 2393, 2685
BstMAI GTCTC 7 cut(s) 715, 2246, 2528, 3689, 3804, 3869, 4163
BstNI CCWGG 4 cut(s) 182, 1927, 2192, 4005
BstNSI RCATGY 2 cut(s) 2477, 2987
BstSCI CCNGG 5 cut(s) 180, 1925, 2190, 3229, 4003
BstSFI CTRYAG 4 cut(s) 1889, 2273, 2748, 3266
BstSLI GKGCMC 1 cut(s) 919
BstUI CGCG 2 cut(s) 260, 761
BstV2I GAAGAC 5 cut(s) 641, 2568, 3368, 3824, 4260
BstX2I RGATCY 5 cut(s) 2111, 2347, 2440, 3907, 4078
BstYI RGATCY 5 cut(s) 2111, 2347, 2440, 3907, 4078
Bsu15I ATCGAT 1 cut(s) 99
Bsu36I CCTNAGG 5 cut(s) 1272, 1314, 1952, 3372, 3519
BsuRI GGCC 5 cut(s) 59, 1149, 2168, 2421, 4008
BsuTUI ATCGAT 1 cut(s) 99
BtgI CCRYGG 1 cut(s) 2064
BtgZI GCGATG 1 cut(s) 3090
BtsI GCAGTG 2 cut(s) 2270, 3512
BtsIMutI CAGTG 7 cut(s) 2152, 2270, 2702, 3512, 3665, 3734, 3956
BtuMI TCGCGA 1 cut(s) 260
BveI ACCTGC 1 cut(s) 141
Cac8I GCNNGC 8 cut(s) 114, 423, 1158, 1221, 1935, 2765, 2951, 3657
CaiI CAGNNNCTG 2 cut(s) 2517, 3889
CciI TCATGA 2 cut(s) 2281, 3585
CfoI GCGC 2 cut(s) 2393, 2685
Cfr13I GGNCC 3 cut(s) 1443, 1659, 4260
ClaI ATCGAT 1 cut(s) 99
CseI GACGC 2 cut(s) 3320, 3614
Csp6I GTAC 7 cut(s) 1825, 2261, 2322, 2371, 2899, 3182, 3556
CspCI CAANNNNNGTGG 2 cut(s) 2862, 2897
CviQI GTAC 7 cut(s) 1825, 2261, 2322, 2371, 2899, 3182, 3556
DraI TTTAAA 1 cut(s) 334
DrdI GACNNNNNNGTC 1 cut(s) 191
DseDI GACNNNNNNGTC 1 cut(s) 191
EaeI YGGCCR 3 cut(s) 57, 2166, 2419
Eam1104I CTCTTC 4 cut(s) 411, 1848, 2967, 4041
EarI CTCTTC 4 cut(s) 411, 1848, 2967, 4041
Eco130I CCWWGG 4 cut(s) 2064, 2416, 2873, 3699
Eco147I AGGCCT 1 cut(s) 1149
Eco31I GGTCTC 2 cut(s) 3689, 4163
Eco32I GATATC 2 cut(s) 256, 1195
Eco47I GGWCC 3 cut(s) 1443, 1659, 4260
Eco57I CTGAAG 9 cut(s) 590, 2312, 2562, 3021, 3347, 3380, 3710, 3818, 4031
Eco81I CCTNAGG 5 cut(s) 1272, 1314, 1952, 3372, 3519
Eco88I CYCGRG 1 cut(s) 3401
EcoNI CCTNNNNNAGG 2 cut(s) 1271, 3371
EcoO109I RGGNCCY 1 cut(s) 1443
EcoRI GAATTC 2 cut(s) 2084, 2327
EcoRII CCWGG 4 cut(s) 180, 1925, 2190, 4003
EcoRV GATATC 2 cut(s) 256, 1195
EcoT14I CCWWGG 4 cut(s) 2064, 2416, 2873, 3699
EcoT22I ATGCAT 2 cut(s) 1488, 3948
ErhI CCWWGG 4 cut(s) 2064, 2416, 2873, 3699
FalI AAGNNNNNCTT 8 cut(s) 189, 221, 426, 458, 1274, 1306, 1987, 2019
FaqI GGGAC 3 cut(s) 884, 988, 2619
FauI CCCGC 1 cut(s) 1746
FauNDI CATATG 1 cut(s) 3480
FblI GTMKAC 4 cut(s) 1104, 1571, 2142, 2995
FspBI CTAG 8 cut(s) 920, 1142, 2672, 3092, 3852, 3861, 3894, 3977
FspI TGCGCA 2 cut(s) 2392, 2684
GlaI GCGC 2 cut(s) 2392, 2684
GsaI CCCAGC 2 cut(s) 886, 2607
GsuI CTGGAG 2 cut(s) 483, 3779
HaeIII GGCC 5 cut(s) 59, 1149, 2168, 2421, 4008
HapII CCGG 2 cut(s) 3230, 4173
HgaI GACGC 2 cut(s) 3320, 3614
HhaI GCGC 2 cut(s) 2393, 2685
Hin6I GCGC 2 cut(s) 2391, 2683
HinP1I GCGC 2 cut(s) 2391, 2683
HincII GTYRAC 3 cut(s) 1869, 2143, 2643
HindII GTYRAC 3 cut(s) 1869, 2143, 2643
HindIII AAGCTT 5 cut(s) 198, 696, 3170, 3236, 3932
HpaI GTTAAC 1 cut(s) 2643
HpaII CCGG 2 cut(s) 3230, 4173
HpyCH4IV ACGT 2 cut(s) 376, 3829
HpySE526I ACGT 2 cut(s) 376, 3829
HspAI GCGC 2 cut(s) 2391, 2683
KpnI GGTACC 1 cut(s) 1828
KspAI GTTAAC 1 cut(s) 2643
LguI GCTCTTC 2 cut(s) 411, 1848
LmnI GCTCC 3 cut(s) 2214, 2699, 4158
MaeI CTAG 8 cut(s) 920, 1142, 2672, 3092, 3852, 3861, 3894, 3977
MaeII ACGT 2 cut(s) 376, 3829
MaeIII GTNAC 8 cut(s) 795, 1023, 1470, 2097, 2406, 3344, 3769, 3916
MfeI CAATTG 3 cut(s) 609, 1800, 2160
MflI RGATCY 5 cut(s) 2111, 2347, 2440, 3907, 4078
MhlI GDGCHC 3 cut(s) 919, 2704, 3358
MlsI TGGCCA 3 cut(s) 59, 2168, 2421
MluNI TGGCCA 3 cut(s) 59, 2168, 2421
MlyI GAGTC 8 cut(s) 98, 392, 764, 906, 1874, 3049, 3541, 4065
MmeI TCCRAC 6 cut(s) 1477, 1521, 3037, 3067, 3780, 3822
Mox20I TGGCCA 3 cut(s) 59, 2168, 2421
Mph1103I ATGCAT 2 cut(s) 1488, 3948
MroXI GAANNNNTTC 3 cut(s) 2805, 3297, 3813
MscI TGGCCA 3 cut(s) 59, 2168, 2421
MslI CAYNNNNRTG 6 cut(s) 528, 1461, 2193, 2363, 2382, 4233
Msp20I TGGCCA 3 cut(s) 59, 2168, 2421
MspCI CTTAAG 1 cut(s) 3901
MspI CCGG 2 cut(s) 3230, 4173
MspR9I CCNGG 5 cut(s) 182, 1927, 2192, 3231, 4005
MunI CAATTG 3 cut(s) 609, 1800, 2160
Mva1269I GAATGC 1 cut(s) 4062
MvaI CCWGG 4 cut(s) 182, 1927, 2192, 4005
MvnI CGCG 2 cut(s) 260, 761
NciI CCSGG 1 cut(s) 3231
NcoI CCATGG 1 cut(s) 2064
NdeI CATATG 1 cut(s) 3480
NlaIV GGNNCC 5 cut(s) 1719, 1826, 2113, 2509, 2745
NmeAIII GCCGAG 1 cut(s) 1561
NmuCI GTSAC 3 cut(s) 2097, 3344, 3769
NruI TCGCGA 1 cut(s) 260
NsbI TGCGCA 2 cut(s) 2392, 2684
NsiI ATGCAT 2 cut(s) 1488, 3948
NspI RCATGY 2 cut(s) 2477, 2987
PaeR7I CTCGAG 1 cut(s) 3401
PagI TCATGA 2 cut(s) 2281, 3585
PceI AGGCCT 1 cut(s) 1149
PciI ACATGT 2 cut(s) 2473, 2983
PciSI GCTCTTC 2 cut(s) 411, 1848
PctI GAATGC 1 cut(s) 4062
PdmI GAANNNNTTC 3 cut(s) 2805, 3297, 3813
PflMI CCANNNNNTGG 2 cut(s) 2417, 3743
PfoI TCCNGGA 1 cut(s) 180
PleI GAGTC 8 cut(s) 98, 391, 763, 905, 1873, 3048, 3541, 4065
PpsI GAGTC 8 cut(s) 98, 391, 763, 905, 1873, 3048, 3541, 4065
PpuMI RGGWCCY 1 cut(s) 1443
PscI ACATGT 2 cut(s) 2473, 2983
PsiI TTATAA 1 cut(s) 935
Psp5II RGGWCCY 1 cut(s) 1443
Psp6I CCWGG 4 cut(s) 180, 1925, 2190, 4003
PspFI CCCAGC 2 cut(s) 882, 2603
PspGI CCWGG 4 cut(s) 180, 1925, 2190, 4003
PspN4I GGNNCC 5 cut(s) 1719, 1826, 2113, 2509, 2745
PspPI GGNCC 3 cut(s) 1443, 1659, 4260
PspPPI RGGWCCY 1 cut(s) 1443
PsrI GAACNNNNNNTAC 2 cut(s) 2215, 2247
PstI CTGCAG 3 cut(s) 1893, 2277, 3270
PstNI CAGNNNCTG 2 cut(s) 2517, 3889
PsuI RGATCY 5 cut(s) 2111, 2347, 2440, 3907, 4078
RruI TCGCGA 1 cut(s) 260
RsaI GTAC 7 cut(s) 1826, 2262, 2323, 2372, 2900, 3183, 3557
RsaNI GTAC 7 cut(s) 1825, 2261, 2322, 2371, 2899, 3182, 3556
RseI CAYNNNNRTG 6 cut(s) 528, 1461, 2193, 2363, 2382, 4233
SalI GTCGAC 1 cut(s) 2141
SapI GCTCTTC 2 cut(s) 411, 1848
Sau96I GGNCC 3 cut(s) 1443, 1659, 4260
ScaI AGTACT 2 cut(s) 2262, 3557
SchI GAGTC 8 cut(s) 98, 392, 764, 906, 1874, 3049, 3541, 4065
ScrFI CCNGG 5 cut(s) 182, 1927, 2192, 3231, 4005
SduI GDGCHC 3 cut(s) 919, 2704, 3358
SfcI CTRYAG 4 cut(s) 1889, 2273, 2748, 3266
Sfr274I CTCGAG 1 cut(s) 3401
SinI GGWCC 3 cut(s) 1443, 1659, 4260
SlaI CTCGAG 1 cut(s) 3401
SmiMI CAYNNNNRTG 6 cut(s) 528, 1461, 2193, 2363, 2382, 4233
SseBI AGGCCT 1 cut(s) 1149
SsiI CCGC 5 cut(s) 759, 1285, 1753, 2697, 3385
SspI AATATT 4 cut(s) 1234, 1975, 3068, 3191
SspMI CTAG 8 cut(s) 920, 1142, 2672, 3092, 3852, 3861, 3894, 3977
StuI AGGCCT 1 cut(s) 1149
StyD4I CCNGG 5 cut(s) 180, 1925, 2190, 3229, 4003
StyI CCWWGG 4 cut(s) 2064, 2416, 2873, 3699
TaiI ACGT 2 cut(s) 379, 3832
TatI WGTACW 4 cut(s) 2260, 2370, 3181, 3555
TscAI CASTG 7 cut(s) 2152, 2277, 2709, 3519, 3672, 3734, 3956
TseFI GTSAC 3 cut(s) 2097, 3344, 3769
Tsp45I GTSAC 3 cut(s) 2097, 3344, 3769
TspGWI ACGGA 3 cut(s) 1672, 2747, 3332
TspRI CASTG 7 cut(s) 2152, 2277, 2709, 3519, 3672, 3734, 3956
Van91I CCANNNNNTGG 2 cut(s) 2417, 3743
Vha464I CTTAAG 1 cut(s) 3901
VneI GTGCAC 1 cut(s) 915
VpaK11BI GGWCC 3 cut(s) 1443, 1659, 4260
XagI CCTNNNNNAGG 2 cut(s) 1271, 3371
XbaI TCTAGA 2 cut(s) 2671, 3976
XceI RCATGY 2 cut(s) 2477, 2987
XhoI CTCGAG 1 cut(s) 3401
XmiI GTMKAC 4 cut(s) 1104, 1571, 2142, 2995
XmnI GAANNNNTTC 3 cut(s) 2805, 3297, 3813
XspI CTAG 8 cut(s) 920, 1142, 2672, 3092, 3852, 3861, 3894, 3977
ZrmI AGTACT 2 cut(s) 2262, 3557
Zsp2I ATGCAT 2 cut(s) 1488, 3948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.