Rorug01G0025200

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
4082249 .. 4094540
12292 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0025200.1

Sequence Viewer

Length: 4884 bp
ATGTTACTCATAATAATTGAGTTATCATTCCCAGCTACTTGGTTCTGCAAACACTATTTTCAAACTTGCCAAACCTCCTCAACTTTGCCCCATTTCACCCGTCCACGGAAATTTGAGGTTTTCCTGAGTTTTAGAGGTTTAGACACCCGAAAAGGTTTTACTGACCACCTATACAAGGCTTTATTTCTTAATGGAATCCACACTTTTAGGGATGATGAACAACTTGAGAGTGGGAAACCCATTTCGTTGGAACTCTCCAAAGCAATTCGAGAATCAGAAATTTCAGTCATCGTTCTTTCAAAAAACTATGCAACCTCAACATGGTGTCTAGATGAACTAGCGGAAATGGTTGAACGCATGGATGAGCCTGGAGGACTCATAATCTTGCCTGTGTTCTATGACGTGACACCATCTCAAGTACGAGAGCAGACCGGAGATTCTTTTGAAGAAGCGTTCGCTCAACATGAACACAATTTCGTAGGGGACACAGGAAAGGTGACAAGATGGAGAAAATCTTTGATTCAAGTCGCTGGCCTCTCCGGATATGATTTAAGAAATTTTAGGCACGAAACAGAAGTGATTCAAAGGATAGTTGAACGCATTTTTGGTGCATTGAATTACACAAACCATATATTCTCTAATGATTTGAAGGACTTTGTTGGTATTGATCGTGTGAAAGAAATTGAATTGAACTTGTGTATGGAGTCGGAAGAAATTTGTGTAGTTGGGTTTTGTGGCATGCCAGGGATTGGTAAGACAACCGTTGCACAAGCTCTTTTTGTAAGAATCCGCAATCAATTTGAAGCTTTTAGTTTCATTTCTAAGGTTGGAGAAATATCTAGGAGTGAAAGTTTATTTCATATCCAAGAACAACTTTGTGATGACTTGTTGAATAGAAAAGTAAACATAAAGAATGTCAATGAAGTCATAAGCAGGAGATTGCGTGGCAAACGAGTGCTTATCGTTCTTGACAATGTGGATGAATTAGAACAAATAGAGTCTGTAGCTGGCAGTGGTGATAATTTGTATGATCGATTCGGTCCTGGTAGTAGAATCATCATAACTACAAGAGATGAAAGGTTGTTGATAAACTATGAGCCAAAAATATACAAGGTTGAGAAACTTACTGAAGATGAAGCTCTTCTGCTCTTCTGTCGGAAAGCATTTAAGAAAGACCATCCTTTGGATGGATTTGCTGAGCTGGCTTACAAATTTGTAGACTATATTGATGGTCTTCCTTTGGCTCTTGTAGTTTTGGGTTCCTCATTATTCAAAAGAAGTGTAAAAGAATGGTCTAGTAAGTTTAATAGATTGAAAGATTATAATTATTCTGGTGAGAGGAAAATCATTGATATTCTCAAAGTCAGTTTTGATGGATTAGAGAATCAAGCAGAGAAGGAAATATTTTTAGACACTGCATGTTTCTTCAAAGGCGAGGATGCATGTCGTGTAGAAAAGATATTTGAGAGTTGTGGCTACTATCCGGACATCAGTATCAATATCCTCCTTGAGAAATATTTAGTAAGTATTATAGGAGGAAAACTGTGGATGCATGATTTACTTCAAGAAATGGGCAGAGAAATTGTTCGAGGAGAGTCCCAAAAGCCAGGAAAGCGCAGCAGATTGTGGCTTCATACAGATGCCCTTCCTTTACTTAGGAATAATAAGGGGACAGATGCTGTCAAAGGTATCTTCTTATGCTCGCCTCAACAAGACAATGTGCACTTGAAGGCAGATCCCTTCGCAAACATGGAAAGTCTAAGAATGTTGAAAATTTACAATGTGATATTTTCTGGATGCCTTCAGTTTCTTTCAAATGAGTTAAGCTTCTTGGAATGGCATGGATATCCTTTAAAATCTCTGCCTTCATGTTTTGAACCTGATAAACTTGTTGAACTGAATTTGTATCAGAGTGAAATAGAGCAATTGTGGGAAGAAATTGAGAGGCCTTTGGAAAAGTTGGTGATAATCAACCTTACCGACTGTGAATACTTGATCAAGACCCCTGACTTTGATAAAGTGCCAAAGCTTGAGAGGCTAATCCTCAAAGGTTGTACCAGATTGTCTGAGGTTGACCTCTCTGTTGGAGTGCTGCAACGGCTCATTTTGCTGAATCTGGAAGGTTGTGAATGTCTTACTACTCTTCTTCCCAACAGTATCAACTTGAGATCGCTCACAAAGTTCATTCTTTCGGGATGTTCCAAACTGAAAAACCTTCCAGAATTTGGGGAAGAAATGAAACAATTAAGGGAACTTCACTTAAATGGGACAGCTATAGAAGAGCTACCAACATCAATGAAACATTTGACTGGCCTTACTCTGCTCAATCTCAAAGAATGCAAGAACCTTCTTTGTCTGCCAGAGGTCATTTGTACCGCTTTGACATCACTTCAAATATTGAACCTCTCAGGGTGTTTAAATCTTGCCTTGTTGCCGGAAAGCTTGGTGTGTTTAGAATACTTAGAGGAGCTTCATGCAGGTGGGAGTGCTATACCACAATTTCCGTCCTCCATTCTACATCTGAAAAACCTGCAAGTTTTATGTTTTGCTGGTTGTAAGGGACTGCCATCCTCTGTGGGTTTCGAGTTGCCTGCTTCATTTTCATCTGGTTTATGCTCTTTGAAGAAATTAAACCTTCGCAACTGCAATCTGTGTGAAGGATCAATCCCAGATGATCTTGGAAGCGTATCCTCTTTGCAGTATCTAGATTTAAGTGGAAACAATTTCATGACCATACCAAAAAGTATCTCTCAACTTTCTCAGCTTGAAGACCTTGTATTGGATAATTGTAGCAACCTTCAATCATTGCCAAGACTTCCATCCAGTATAAGAGTTGTAACGGCACAGAATTGTCCTCTCCTACAGGGAACACATTCGAATAAATTAACGGTGTGGACTTCCACTGCTGCAGGATTTAGTGTTATAAATTGCCAAAGTGGTGAAGCCAAGCCTCAGTGGATTGACTTACCTGATCCACATCTTCGGAGGCCATTCTGTCAAACATTCTTCGAGGGTGCAATTTATCGTGGTAGTAATTTTGAATATAGTTATATATCAAAGGATACTCCTGCATGGTTGAGCCGTCGGAGTACTGGATCATCTATAACAATCCCACTACCTCCGGATTTGGATGATAACTGTAAATGGATGGGATTTGCTCTGTGTTTTACTTGTGTAACGCAGCATCATGATTCTCTGGATACAACATATGTCTTCCTTGATGACCAAAAGCAAATAAACTTGAATCGCAATTACCGTATTCATTTCTATACAACGGAAGATCCTCTTGAACGTCCCCTAGTGCATAATTACCCTGATTGCGATTGGGTTGGATCATTCATGCACTGGAACTATACACCAAGAAGTGATTTTGTAGAAATTTCGAATAAACGCTTCATCCGAGCTACAATTGTACCAGGCAGCCCAGAGGTGGAGGTGACAGGGTGTGCCGCCAGTCTAATATACTTGGAAGAAGTGGCAGAATTTGTCCAGAAAATGAATATTCACCATGACAATTGCAATAAAGGTTATAGGTATCTAGTGGATGCAATGGGAAGTATTCCTTCGACGAGCAGGATTCAAACTAAACCAGAAGTACAAAAACAAGAAACTACTAGTACTTCTGCCAGGCTTGTAGGACAATTGAGAAGAAACGTGGTGTCGTTGGTTGAAGAACTATTCGAGGGGGGCAACCCACGTCGCTATGATTATGGTTTTATTTTGCCTCTGGGAGAAAAATTAGCTTGGTTTAGTGAACAAAGTACTGGTTGTGTAGTGAGCTCCCCTCTTCCTCCAGAGCTGCATAATGATGAGAATTGGGTAGGATTTGCTCTCTATGTTGTTTGCACTTTGCCTCCAGGTGTTCGCCTTAGCCACAGATTGTCATTCTTTGAGTGTCAATTTCATACATCTAATGAAGCCGTGGGTCCGAACCAATTGATACATCGCCTAGTGCTACGTTCCCCCTTCGATGACAATTTGATGGGGTCAAATCGACTCCTTCTTATTCATGTACCACGAGCACGTTTTCCAGAACGATTGAACCGGTGTCGTTGCATTCAAGCTTTATTTGGATCCACCACTCTAGGTGTGCAGGTTGATATATGTGGGATGCATCTAGTATACGACCAAGACTTGAACGGCTTAGTCCAAACAATTGCCCACTGCGCTGTGACTAGTCAGCCTGTTTACTACGGAATTGGTGATTTGACAGTTGCCACGAAATTAGGTAACAATGCTGGAATGACAGCTATGATTACGAATCTGCTCGAGGCAGCTAAATCCAATGAGGGCAGGTCATTACGCCAAGTTCGTCTTCCTGTGGCTTTTGGGCCTGTAGATTCCGGTGAGACTACTCTGACTTTTAGAGGTTCTATCTTCTTTCCTGCTGACGGCTCGCAACATGAAAGAGAAAGAAGGCCCGTTCATGGGGACGAAACAAGTGCAATTGGTGATTTCAAGTTTCAGCTACCGGACTTTGGCCCTTCCTTCGACCGTTTCAATAACATGCGCTTGGATAATCAGATCCTGGGTTTTGATCGTTACTTGAAATACAATTCTTGTTTCCCTCCTAATGAAATTGCAGAGTGGTTTGGGCATCCAAGCAGTGGGTCCTCCGTAACAATCCCTCTACCATCATATCTGTATGATGACCCCAATTGGACAGGACTAGCTTTATGTGCATACTTTTCAGTCCTCAACCATACAACTACCGACCTTGACAATTTGGATCAAGAAATTTCTCACAACCTTACATGTCTTCTTGAAACTGATAGAGGTTGTCTGGAGTCTCTTCATGGCTATTGCACCACCAAGAATTTGAGTGGTTATATCATATGGGAGGATTCATTTGGTTGTCTTATATACCACGATGGTGGTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1627

Amino Acids

184.05

Weight (kDa)

5.57

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 37 - 209 5.5e-45 TIR domain
TIR_2 PF13676 40 - 137 3.5e-14 TIR domain
NB-ARC PF00931 230 - 392 2.1e-20 NB-ARC domain
NACHT PF05729 245 - 389 1.8e-10 NACHT domain
WHD_ROQ1 PF23282 462 - 533 1e-20 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 871 - 933 1.3e-06 Leucine-rich repeat region
LRR_8 PF13855 873 - 930 6.8e-06 Leucine rich repeat
C-JID PF20160 1020 - 1158 2e-06 C-JID domain
C-JID PF20160 1522 - 1570 1.2e-07 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1323, 2924
AarI CACCTGC 1 cut(s) 2468
Acc36I ACCTGC 4 cut(s) 2468, 2538, 4084, 4284
AccB7I CCANNNNNTGG 4 cut(s) 749, 1183, 2225, 4607
AccI GTMKAC 2 cut(s) 1218, 4122
AccIII TCCGGA 3 cut(s) 539, 1483, 3121
AciI CCGC 4 cut(s) 341, 790, 2376, 3450
AcuI CTGAAG 2 cut(s) 1149, 1787
AfaI GTAC 9 cut(s) 420, 2056, 2374, 3091, 3414, 3597, 3619, 3763, 4014
AflIII ACRYGT 1 cut(s) 4754
AgeI ACCGGT 1 cut(s) 4044
AhlI ACTAGT 2 cut(s) 3614, 4175
AjiI CACGTC 2 cut(s) 403, 3698
AjnI CCWGG 8 cut(s) 367, 742, 1042, 1606, 3415, 3626, 3856, 4527
AjuI GAANNNNNNNTTGG 4 cut(s) 588, 620, 4299, 4331
AleI CACNNNNGTG 1 cut(s) 4872
Alw21I GWGCWC 3 cut(s) 1725, 3782, 4024
Alw26I GTCTC 2 cut(s) 4343, 4794
Alw44I GTGCAC 1 cut(s) 1721
AlwNI CAGNNNCTG 2 cut(s) 1679, 4528
Ama87I CYCGRG 1 cut(s) 4268
Aor13HI TCCGGA 3 cut(s) 539, 1483, 3121
AoxI GGCC 7 cut(s) 532, 1946, 2311, 2987, 4331, 4418, 4480
ApaLI GTGCAC 1 cut(s) 1721
ApeKI GCWGC 7 cut(s) 1617, 2092, 2906, 3181, 3420, 3799, 4274
AsiGI ACCGGT 1 cut(s) 4044
Asp700I GAANNNNTTC 4 cut(s) 579, 1140, 1584, 2872
AspLEI GCGC 3 cut(s) 1617, 4169, 4512
AspS9I GGNCC 6 cut(s) 1040, 3926, 4331, 4419, 4481, 4611
AsuII TTCGAA 2 cut(s) 2876, 3383
AvaI CYCGRG 1 cut(s) 4268
AvaII GGWCC 3 cut(s) 1040, 3926, 4611
BaeGI GKGCMC 1 cut(s) 1725
BaeI ACNNNNGTAYC 4 cut(s) 1477, 1510, 3396, 3429
BamHI GGATCC 1 cut(s) 4073
BanII GRGCYC 1 cut(s) 3782
BauI CACGAG 1 cut(s) 4017
BbsI GAAGAC 5 cut(s) 1226, 2775, 3205, 4307, 4751
Bbv12I GWGCWC 3 cut(s) 1725, 3782, 4024
BbvI GCAGC 7 cut(s) 1629, 2079, 2893, 3193, 3432, 3786, 4286
BceAI ACGGC 6 cut(s) 2114, 2856, 3066, 3905, 4156, 4408
BcgI CGANNNNNNTGC 4 cut(s) 2573, 2607, 4424, 4458
BciT130I CCWGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
BciVI GTATCC 3 cut(s) 2698, 3055, 3193
BclI TGATCA 1 cut(s) 1995
BcoDI GTCTC 2 cut(s) 4343, 4794
BcuI ACTAGT 2 cut(s) 3614, 4175
BfmI CTRYAG 5 cut(s) 1002, 2274, 2861, 2907, 4335
BfuAI ACCTGC 4 cut(s) 2468, 2538, 4084, 4284
BfuI GTATCC 3 cut(s) 2698, 3055, 3193
BisI GCNGC 8 cut(s) 1618, 2093, 2907, 3182, 3421, 3450, 3800, 4275
BlpI GCTNAGC 1 cut(s) 1197
BlsI GCNGC 8 cut(s) 1619, 2094, 2908, 3183, 3422, 3451, 3801, 4276
BmcAI AGTACT 3 cut(s) 3091, 3619, 3763
Bme1390I CCNGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
Bme18I GGWCC 3 cut(s) 1040, 3926, 4611
BmeT110I CYCGRG 1 cut(s) 4268
BmgBI CACGTC 2 cut(s) 403, 3698
BmgT120I GGNCC 6 cut(s) 1040, 3926, 4331, 4419, 4481, 4611
BmiI GGNNCC 4 cut(s) 1261, 3927, 4075, 4612
BmrFI CCNGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
BpiI GAAGAC 5 cut(s) 1226, 2775, 3205, 4307, 4751
BplI GAGNNNNNCTC 2 cut(s) 3769, 3801
BpmI CTGGAG 4 cut(s) 390, 3777, 3840, 4805
Bpu10I CCTNAGC 1 cut(s) 3869
Bpu1102I GCTNAGC 1 cut(s) 1197
Bpu14I TTCGAA 2 cut(s) 2876, 3383
BpuEI CTTGAG 5 cut(s) 245, 399, 1529, 2051, 2185
Bsa29I ATCGAT 1 cut(s) 1033
BsaBI GATNNNNATC 1 cut(s) 2976
BsaJI CCNNGG 4 cut(s) 104, 743, 3921, 4528
BsaWI WCCGGW 7 cut(s) 431, 539, 1483, 3121, 4044, 4343, 4471
BsaXI ACNNNNNCTCC 6 cut(s) 835, 865, 928, 958, 3838, 3868
Bse118I RCCGGY 1 cut(s) 4044
Bse1I ACTGG 6 cut(s) 2314, 2823, 3097, 3350, 3453, 3769
Bse3DI GCAATG 2 cut(s) 2804, 3555
Bse8I GATNNNNATC 1 cut(s) 2976
BseAI TCCGGA 3 cut(s) 539, 1483, 3121
BseBI CCWGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
BseCI ATCGAT 1 cut(s) 1033
BseDI CCNNGG 4 cut(s) 104, 743, 3921, 4528
BseJI GATNNNNATC 1 cut(s) 2976
BseMI GCAATG 2 cut(s) 2804, 3555
BseMII CTCAG 6 cut(s) 116, 1188, 2058, 2421, 2774, 2966
BseNI ACTGG 6 cut(s) 2314, 2823, 3097, 3350, 3453, 3769
BseRI GAGGAG 3 cut(s) 67, 1605, 2480
BseSI GKGCMC 1 cut(s) 1725
BseXI GCAGC 7 cut(s) 1629, 2079, 2893, 3193, 3432, 3786, 4286
BseYI CCCAGC 1 cut(s) 31
BsgI GTGCAG 1 cut(s) 4112
Bsh1285I CGRYCG 1 cut(s) 4495
BshFI GGCC 7 cut(s) 534, 1948, 2313, 2989, 4333, 4420, 4482
BshTI ACCGGT 1 cut(s) 4044
BshVI ATCGAT 1 cut(s) 1033
BsiEI CGRYCG 1 cut(s) 4495
BsiHKAI GWGCWC 3 cut(s) 1725, 3782, 4024
BsiHKCI CYCGRG 1 cut(s) 4268
BsiSI CCGG 8 cut(s) 432, 540, 1484, 2435, 3122, 4045, 4344, 4472
BslFI GGGAC 7 cut(s) 497, 1582, 1684, 2281, 2574, 3279, 4445
BsmAI GTCTC 2 cut(s) 4343, 4794
BsmFI GGGAC 7 cut(s) 497, 1582, 1684, 2281, 2574, 3279, 4445
BsmI GAATGC 2 cut(s) 2342, 4056
BsnI GGCC 7 cut(s) 534, 1948, 2313, 2989, 4333, 4420, 4482
BsoBI CYCGRG 1 cut(s) 4268
Bsp119I TTCGAA 2 cut(s) 2876, 3383
Bsp1286I GDGCHC 3 cut(s) 1725, 3782, 4024
Bsp13I TCCGGA 3 cut(s) 539, 1483, 3121
Bsp1720I GCTNAGC 1 cut(s) 1197
BspACI CCGC 4 cut(s) 341, 790, 2376, 3450
BspANI GGCC 7 cut(s) 534, 1948, 2313, 2989, 4333, 4420, 4482
BspCNI CTCAG 6 cut(s) 117, 1189, 2059, 2420, 2773, 2965
BspDI ATCGAT 1 cut(s) 1033
BspEI TCCGGA 3 cut(s) 539, 1483, 3121
BspHI TCATGA 2 cut(s) 2727, 3187
BspLI GGNNCC 4 cut(s) 1261, 3927, 4075, 4612
BspMAI CTGCAG 1 cut(s) 2911
BspMI ACCTGC 4 cut(s) 2468, 2538, 4084, 4284
BspQI GCTCTTC 3 cut(s) 1146, 1154, 2274
BspT104I TTCGAA 2 cut(s) 2876, 3383
BsrDI GCAATG 2 cut(s) 2804, 3555
BsrFI RCCGGY 1 cut(s) 4044
BsrI ACTGG 6 cut(s) 2314, 2823, 3097, 3350, 3453, 3769
BssAI RCCGGY 1 cut(s) 4044
BssECI CCNNGG 4 cut(s) 104, 743, 3921, 4528
BssNAI GTATAC 1 cut(s) 4123
BssSI CACGAG 1 cut(s) 4017
Bst1107I GTATAC 1 cut(s) 4123
Bst2BI CACGAG 1 cut(s) 4017
Bst2UI CCWGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
Bst4CI ACNGT 9 cut(s) 763, 1545, 1985, 2156, 2890, 3140, 3257, 4213, 4496
Bst6I CTCTTC 6 cut(s) 1146, 1154, 2148, 2274, 3792, 4797
BstBI TTCGAA 2 cut(s) 2876, 3383
BstC8I GCNNGC 7 cut(s) 532, 740, 1009, 1203, 1703, 2592, 4397
BstDSI CCRYGG 2 cut(s) 104, 3921
BstENI CCTNNNNNAGG 1 cut(s) 173
BstHHI GCGC 3 cut(s) 1617, 4169, 4512
BstMAI GTCTC 2 cut(s) 4343, 4794
BstMCI CGRYCG 1 cut(s) 4495
BstMWI GCNNNNNNNGC 7 cut(s) 1202, 1612, 2035, 2098, 2107, 4166, 4679
BstNI CCWGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
BstNSI RCATGY 5 cut(s) 742, 1422, 1446, 4510, 4758
BstSCI CCNGG 8 cut(s) 367, 742, 1042, 1606, 3415, 3626, 3856, 4527
BstSFI CTRYAG 5 cut(s) 1002, 2274, 2861, 2907, 4335
BstSLI GKGCMC 1 cut(s) 1725
BstV1I GCAGC 7 cut(s) 1629, 2079, 2893, 3193, 3432, 3786, 4286
BstV2I GAAGAC 5 cut(s) 1226, 2775, 3205, 4307, 4751
BstX2I RGATCY 4 cut(s) 1735, 3280, 4073, 4524
BstXI CCANNNNNNTGG 3 cut(s) 39, 247, 4874
BstYI RGATCY 4 cut(s) 1735, 3280, 4073, 4524
BstZ17I GTATAC 1 cut(s) 4123
Bsu15I ATCGAT 1 cut(s) 1033
BsuI GTATCC 3 cut(s) 2698, 3055, 3193
BsuRI GGCC 7 cut(s) 534, 1948, 2313, 2989, 4333, 4420, 4482
BsuTUI ATCGAT 1 cut(s) 1033
BtgI CCRYGG 2 cut(s) 104, 3921
BtgZI GCGATG 1 cut(s) 3929
BtrI CACGTC 2 cut(s) 403, 3698
BtsI GCAGTG 5 cut(s) 1018, 1413, 2901, 4162, 4612
BtsIMutI CAGTG 7 cut(s) 1018, 1413, 2901, 2960, 3343, 4162, 4612
BveI ACCTGC 4 cut(s) 2468, 2538, 4084, 4284
Cac8I GCNNGC 7 cut(s) 532, 740, 1009, 1203, 1703, 2592, 4397
CaiI CAGNNNCTG 2 cut(s) 1679, 4528
CciI TCATGA 2 cut(s) 2727, 3187
CfoI GCGC 3 cut(s) 1617, 4169, 4512
Cfr10I RCCGGY 1 cut(s) 4044
Cfr13I GGNCC 6 cut(s) 1040, 3926, 4331, 4419, 4481, 4611
ClaI ATCGAT 1 cut(s) 1033
Csp6I GTAC 9 cut(s) 419, 2055, 2373, 3090, 3413, 3596, 3618, 3762, 4013
CspAI ACCGGT 1 cut(s) 4044
CviQI GTAC 9 cut(s) 419, 2055, 2373, 3090, 3413, 3596, 3618, 3762, 4013
DraI TTTAAA 2 cut(s) 1854, 2418
Eam1104I CTCTTC 6 cut(s) 1146, 1154, 2148, 2274, 3792, 4797
EarI CTCTTC 6 cut(s) 1146, 1154, 2148, 2274, 3792, 4797
Ecl136II GAGCTC 1 cut(s) 3780
Eco147I AGGCCT 1 cut(s) 1948
Eco24I GRGCYC 1 cut(s) 3782
Eco32I GATATC 1 cut(s) 1847
Eco47I GGWCC 3 cut(s) 1040, 3926, 4611
Eco53kI GAGCTC 1 cut(s) 3780
Eco57I CTGAAG 2 cut(s) 1149, 1787
Eco88I CYCGRG 1 cut(s) 4268
EcoICRI GAGCTC 1 cut(s) 3780
EcoNI CCTNNNNNAGG 1 cut(s) 173
EcoO109I RGGNCCY 1 cut(s) 4611
EcoRII CCWGG 8 cut(s) 367, 742, 1042, 1606, 3415, 3626, 3856, 4527
EcoRV GATATC 1 cut(s) 1847
EcoT22I ATGCAT 3 cut(s) 1444, 1554, 4116
EcoT38I GRGCYC 1 cut(s) 3782
FalI AAGNNNNNCTT 8 cut(s) 858, 890, 3270, 3302, 3547, 3579, 4299, 4331
FaqI GGGAC 7 cut(s) 497, 1582, 1684, 2281, 2574, 3279, 4445
FauNDI CATATG 2 cut(s) 3208, 4835
FbaI TGATCA 1 cut(s) 1995
FblI GTMKAC 2 cut(s) 1218, 4122
Fnu4HI GCNGC 8 cut(s) 1618, 2093, 2907, 3182, 3421, 3450, 3800, 4275
FriOI GRGCYC 1 cut(s) 3782
Fsp4HI GCNGC 8 cut(s) 1618, 2093, 2907, 3182, 3421, 3450, 3800, 4275
GlaI GCGC 3 cut(s) 1616, 4168, 4511
GluI GCNGC 8 cut(s) 1618, 2093, 2907, 3182, 3421, 3450, 3800, 4275
GsaI CCCAGC 1 cut(s) 35
GsuI CTGGAG 4 cut(s) 390, 3777, 3840, 4805
HaeIII GGCC 7 cut(s) 534, 1948, 2313, 2989, 4333, 4420, 4482
HapII CCGG 8 cut(s) 432, 540, 1484, 2435, 3122, 4045, 4344, 4472
HhaI GCGC 3 cut(s) 1617, 4169, 4512
Hin6I GCGC 3 cut(s) 1615, 4167, 4510
HinP1I GCGC 3 cut(s) 1615, 4167, 4510
HincII GTYRAC 1 cut(s) 2074
HindII GTYRAC 1 cut(s) 2074
HindIII AAGCTT 5 cut(s) 804, 1825, 2027, 2440, 4062
HpaII CCGG 8 cut(s) 432, 540, 1484, 2435, 3122, 4045, 4344, 4472
Hpy166II GTNNAC 9 cut(s) 104, 904, 1219, 1723, 2074, 2895, 3755, 4123, 4189
Hpy8I GTNNAC 9 cut(s) 104, 904, 1219, 1723, 2074, 2895, 3755, 4123, 4189
Hpy99I CGWCG 3 cut(s) 3087, 3571, 3702
HpyCH4III ACNGT 9 cut(s) 763, 1545, 1985, 2156, 2890, 3140, 3257, 4213, 4496
HpyCH4IV ACGT 6 cut(s) 402, 3292, 3654, 3697, 3958, 4024
HpyF10VI GCNNNNNNNGC 7 cut(s) 1202, 1612, 2035, 2098, 2107, 4166, 4679
HpySE526I ACGT 6 cut(s) 402, 3292, 3654, 3697, 3958, 4024
HspAI GCGC 3 cut(s) 1615, 4167, 4510
Kpn2I TCCGGA 3 cut(s) 539, 1483, 3121
Ksp22I TGATCA 1 cut(s) 1995
LguI GCTCTTC 3 cut(s) 1146, 1154, 2274
LmnI GCTCC 2 cut(s) 2467, 3785
Lsp1109I GCAGC 7 cut(s) 1629, 2079, 2893, 3193, 3432, 3786, 4286
MaeII ACGT 6 cut(s) 402, 3292, 3654, 3697, 3958, 4024
MfeI CAATTG 8 cut(s) 1925, 3408, 3514, 3641, 3935, 4155, 4446, 4657
MflI RGATCY 4 cut(s) 1735, 3280, 4073, 4524
MhlI GDGCHC 3 cut(s) 1725, 3782, 4024
MlyI GAGTC 6 cut(s) 369, 713, 1007, 1604, 3990, 4796
MmeI TCCRAC 7 cut(s) 228, 687, 808, 1136, 2065, 3065, 3310
Mph1103I ATGCAT 3 cut(s) 1444, 1554, 4116
MroI TCCGGA 3 cut(s) 539, 1483, 3121
MroXI GAANNNNTTC 4 cut(s) 579, 1140, 1584, 2872
MslI CAYNNNNRTG 5 cut(s) 1638, 2262, 2478, 3807, 4872
MspI CCGG 8 cut(s) 432, 540, 1484, 2435, 3122, 4045, 4344, 4472
MspR9I CCNGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
MunI CAATTG 8 cut(s) 1925, 3408, 3514, 3641, 3935, 4155, 4446, 4657
Mva1269I GAATGC 2 cut(s) 2342, 4056
MvaI CCWGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
MwoI GCNNNNNNNGC 7 cut(s) 1202, 1612, 2035, 2098, 2107, 4166, 4679
NdeI CATATG 2 cut(s) 3208, 4835
NlaIV GGNNCC 4 cut(s) 1261, 3927, 4075, 4612
NmuCI GTSAC 4 cut(s) 403, 496, 3436, 4171
NsiI ATGCAT 3 cut(s) 1444, 1554, 4116
NspI RCATGY 5 cut(s) 742, 1422, 1446, 4510, 4758
NspV TTCGAA 2 cut(s) 2876, 3383
OliI CACNNNNGTG 1 cut(s) 4872
PaeI GCATGC 1 cut(s) 742
PaeR7I CTCGAG 1 cut(s) 4268
PagI TCATGA 2 cut(s) 2727, 3187
PaqCI CACCTGC 1 cut(s) 2468
PceI AGGCCT 1 cut(s) 1948
PciI ACATGT 1 cut(s) 4754
PciSI GCTCTTC 3 cut(s) 1146, 1154, 2274
PcsI WCGNNNNNNNCGW 3 cut(s) 3253, 3397, 4309
PctI GAATGC 2 cut(s) 2342, 4056
PdmI GAANNNNTTC 4 cut(s) 579, 1140, 1584, 2872
PflMI CCANNNNNTGG 4 cut(s) 749, 1183, 2225, 4607
PinAI ACCGGT 1 cut(s) 4044
PkrI GCNGC 8 cut(s) 1619, 2094, 2908, 3183, 3422, 3451, 3801, 4276
PleI GAGTC 6 cut(s) 369, 712, 1006, 1603, 3990, 4795
PpsI GAGTC 6 cut(s) 369, 712, 1006, 1603, 3990, 4795
PpuMI RGGWCCY 1 cut(s) 4611
PscI ACATGT 1 cut(s) 4754
PsiI TTATAA 2 cut(s) 1323, 2924
Psp124BI GAGCTC 1 cut(s) 3782
Psp5II RGGWCCY 1 cut(s) 4611
Psp6I CCWGG 8 cut(s) 367, 742, 1042, 1606, 3415, 3626, 3856, 4527
PspFI CCCAGC 1 cut(s) 31
PspGI CCWGG 8 cut(s) 367, 742, 1042, 1606, 3415, 3626, 3856, 4527
PspN4I GGNNCC 4 cut(s) 1261, 3927, 4075, 4612
PspPI GGNCC 6 cut(s) 1040, 3926, 4331, 4419, 4481, 4611
PspPPI RGGWCCY 1 cut(s) 4611
PspXI VCTCGAGB 1 cut(s) 4268
PstI CTGCAG 1 cut(s) 2911
PstNI CAGNNNCTG 2 cut(s) 1679, 4528
PsuI RGATCY 4 cut(s) 1735, 3280, 4073, 4524
RsaI GTAC 9 cut(s) 420, 2056, 2374, 3091, 3414, 3597, 3619, 3763, 4014
RsaNI GTAC 9 cut(s) 419, 2055, 2373, 3090, 3413, 3596, 3618, 3762, 4013
RseI CAYNNNNRTG 5 cut(s) 1638, 2262, 2478, 3807, 4872
SacI GAGCTC 1 cut(s) 3782
SapI GCTCTTC 3 cut(s) 1146, 1154, 2274
SatI GCNGC 8 cut(s) 1618, 2093, 2907, 3182, 3421, 3450, 3800, 4275
Sau96I GGNCC 6 cut(s) 1040, 3926, 4331, 4419, 4481, 4611
ScaI AGTACT 3 cut(s) 3091, 3619, 3763
SchI GAGTC 6 cut(s) 369, 713, 1007, 1604, 3990, 4796
ScrFI CCNGG 8 cut(s) 369, 744, 1044, 1608, 3417, 3628, 3858, 4529
SduI GDGCHC 3 cut(s) 1725, 3782, 4024
SfcI CTRYAG 5 cut(s) 1002, 2274, 2861, 2907, 4335
Sfr274I CTCGAG 1 cut(s) 4268
SfuI TTCGAA 2 cut(s) 2876, 3383
SinI GGWCC 3 cut(s) 1040, 3926, 4611
SlaI CTCGAG 1 cut(s) 4268
SmiMI CAYNNNNRTG 5 cut(s) 1638, 2262, 2478, 3807, 4872
SmlI CTYRAG 6 cut(s) 224, 414, 1508, 2030, 2164, 4268
SmoI CTYRAG 6 cut(s) 224, 414, 1508, 2030, 2164, 4268
SpeI ACTAGT 2 cut(s) 3614, 4175
SphI GCATGC 1 cut(s) 742
SseBI AGGCCT 1 cut(s) 1948
SsiI CCGC 4 cut(s) 341, 790, 2376, 3450
SspI AATATT 4 cut(s) 1404, 1517, 2397, 3502
SstI GAGCTC 1 cut(s) 3782
StuI AGGCCT 1 cut(s) 1948
StyD4I CCNGG 8 cut(s) 367, 742, 1042, 1606, 3415, 3626, 3856, 4527
TaaI ACNGT 9 cut(s) 763, 1545, 1985, 2156, 2890, 3140, 3257, 4213, 4496
TaiI ACGT 6 cut(s) 405, 3295, 3657, 3700, 3961, 4027
TaqII GACCGA 1 cut(s) 1028
TatI WGTACW 4 cut(s) 3089, 3595, 3617, 3761
TauI GCSGC 1 cut(s) 3452
TscAI CASTG 7 cut(s) 1018, 1420, 2908, 2960, 3350, 4169, 4612
TseFI GTSAC 4 cut(s) 403, 496, 3436, 4171
TseI GCWGC 7 cut(s) 1617, 2092, 2906, 3181, 3420, 3799, 4274
Tsp45I GTSAC 4 cut(s) 403, 496, 3436, 4171
TspGWI ACGGA 5 cut(s) 121, 2493, 3290, 4209, 4606
TspRI CASTG 7 cut(s) 1018, 1420, 2908, 2960, 3350, 4169, 4612
Van91I CCANNNNNTGG 4 cut(s) 749, 1183, 2225, 4607
VneI GTGCAC 1 cut(s) 1721
VpaK11BI GGWCC 3 cut(s) 1040, 3926, 4611
XagI CCTNNNNNAGG 1 cut(s) 173
XbaI TCTAGA 2 cut(s) 328, 2704
XceI RCATGY 5 cut(s) 742, 1422, 1446, 4510, 4758
XcmI CCANNNNNNNNNTGG 1 cut(s) 1184
XhoI CTCGAG 1 cut(s) 4268
XmiI GTMKAC 2 cut(s) 1218, 4122
XmnI GAANNNNTTC 4 cut(s) 579, 1140, 1584, 2872
ZrmI AGTACT 3 cut(s) 3091, 3619, 3763
Zsp2I ATGCAT 3 cut(s) 1444, 1554, 4116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.