Rorug05G0216000

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
22231360 .. 22234056
2697 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0216000.1

Sequence Viewer

Length: 1782 bp
ATGGCTTCTCTGTTGCATCTCCTGTTCTTCCTCTTCCTTCAACCTCTCTTCTCCATTGCCAATGTCCACAAACTCAACCAACTCAGATCAGAGCTCATCTCCCAACCAACACCTCTAAATGACACCCCACCAACTCTTTACTTTGAAGTAACCAAACCCATTAAACTACCCAAAACCAAGCCTTGTTCCCAGCTCATTCTCCAGCATGACTTTGCCTACACTTATGGAAAAGCCCCAGTCTTTGCTAACTACCACCCTCCCTCAAATTGTCCATCTCAGAACTTCTCCAAGATTGTTCTTGAATGGAAAGCTACAAGCAAGGGAAGGCAATTTGACCGCATTTTTGGGGTTTGGCTTTCTGGGGTTGAGCTTCTCAGGAGCTGCACCGCAGAGCCGAGGCCTAATGGGATTGTCTGGAGGGTTGAGAAGGACATCACCAGGTACTATTCATTACTCCAGAAGAATCAGACACTTGCTGTTTATCTTGGCAATTTGATTGATAAAACCTATACTGGGGTTTACCATGTCAATGTTAGTATTCATTTTTATCCTGCTGAAGAGAACTTGATTGATCATGACCAAAAGTTGGCATCTTGGGCGGATTTGATTCTGCCCATTTCTAGAAATTTGCCTTTGAAGGATGGGTTGTGGTTTGAAATTGAGAATTCAACTGATACCAAGTTGAAGGAATTTGAGATTCCTCGAAATGCTTATAGGGCTGTGTTGGAAGTGTATGTTTCCTTTCATGAGAATGATGAATCCTGGTATGCAAATCCTACTAATGAGTACATTGCTGCAAACAACCTTAGCGTGCCCGGAAATGGACCCTTTAGGGAGGTTGTGGTCAGTATAGATGGTCATGTTGTTGGTGCTGTGTGGCCTTTTACAGTGATATTCACAGGAGGGGTCAATCCTCTCCTGTGGCGACCCATTACTGCAATTGGCTCATACGATCTTCCTTCTTATGACATCGAAATCACACCGTTTTTAGGGAACATATTGGATGGGAAGAGCCACAAGATTGGGTTTAATGTTACAAATGCCTTGAATGTTTGGTACATAGATGCAAATTTGCATATTTGGTTGGACAAACAGAGCAGAAGAACTGAGGGACAGCTTGTGAAGCACACAAGCTTGGCCCTTGTTATTTCACTGGTGTCAGATTTCAAGGGTTTAAATGGCACATTTATCACAAGGGTGAGCAGGTCTGTCTCATCAACTGGGTGGGTGAAGTCATCGAATGGAAATATTACAACCCAGTCAATTCAAAATTTTTACTACAGTAATACAATGGTCATGGGGAATAATGGTGATGTGCAGATAGTGAACCAGAACATCCATTTCAATGACACTGTTCATATCATGACGCCTTCCTCCATCGTTCACTCACTCTCATCACACAAAACATTTCCCCTTTACTTGTACACTGACTACTTGGAACAAAAAAATAATACATATTTATTGGTGACAAATGTCAGTCTGGGAGTTATTGAGAAGAAAACTGCAAGTGCTGGTTCTCGATTCATGAAGAGCTCTCTCAGAAATTTGCAGAATGCAGAGGGTCATATGGTTGTAAAAGATAATTTGGTAGTCAGTGGAGTCGGGAATACACAGCAAATGTACAGATATCATGGTGGAAAATTCTGTTACTTTAGGAATATAAGCAGCTCAAACTACACCATACTTTATGATAAGGTTGAGAATACATGCAACAACAAACCAAAGTCTAACTGGGATTTTGGTTTGAGAAGACTGTGGCCTTTTGGTGCTGGATTTATTTGA

Protein Analysis

593

Amino Acids

67.28

Weight (kDa)

8.85

Isoelectric Point (pI)

39.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PNGaseA PF12222 59 - 376 3.8e-105 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNGase_A_C PF25156 395 - 472 5.9e-22 PNGase_A C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1194
AccB7I CCANNNNNTGG 1 cut(s) 586
AciI CCGC 3 cut(s) 337, 387, 599
AcsI RAATTY 7 cut(s) 625, 664, 689, 1069, 1270, 1543, 1640
AcuI CTGAAG 1 cut(s) 576
AcyI GRCGYC 1 cut(s) 1367
AfaI GTAC 5 cut(s) 443, 788, 1058, 1424, 1622
AfiI CCNNNNNNNGG 4 cut(s) 513, 586, 821, 989
AjnI CCWGG 2 cut(s) 437, 761
AleI CACNNNNGTG 1 cut(s) 1196
AluBI AGCT 9 cut(s) 94, 193, 311, 370, 381, 1117, 1134, 1533, 1668
AluI AGCT 9 cut(s) 94, 193, 311, 370, 381, 1117, 1134, 1533, 1668
Alw21I GWGCWC 2 cut(s) 96, 1535
Alw26I GTCTC 1 cut(s) 1216
AlwNI CAGNNNCTG 1 cut(s) 381
AoxI GGCC 4 cut(s) 398, 878, 1137, 1757
ApeKI GCWGC 3 cut(s) 381, 794, 1665
ApoI RAATTY 7 cut(s) 625, 664, 689, 1069, 1270, 1543, 1640
ArsI GACNNNNNNTTYG 2 cut(s) 326, 358
AspS9I GGNCC 2 cut(s) 824, 1138
AsuC2I CCSGG 1 cut(s) 816
AsuHPI GGTGA 5 cut(s) 427, 1210, 1240, 1322, 1477
AvaII GGWCC 1 cut(s) 824
BaeGI GKGCMC 1 cut(s) 816
BanII GRGCYC 2 cut(s) 96, 1535
BbsI GAAGAC 1 cut(s) 1756
Bbv12I GWGCWC 2 cut(s) 96, 1535
BbvI GCAGC 3 cut(s) 368, 781, 1677
BccI CCATC 5 cut(s) 280, 635, 848, 998, 1385
BciT130I CCWGG 2 cut(s) 439, 763
BclI TGATCA 1 cut(s) 571
BcnI CCSGG 1 cut(s) 816
BcoDI GTCTC 1 cut(s) 1216
BfaI CTAG 1 cut(s) 621
BfmI CTRYAG 1 cut(s) 1279
BfuAI ACCTGC 1 cut(s) 1194
BisI GCNGC 3 cut(s) 382, 795, 1666
BlsI GCNGC 3 cut(s) 383, 796, 1667
Bme1390I CCNGG 3 cut(s) 439, 763, 816
Bme18I GGWCC 1 cut(s) 824
BmgT120I GGNCC 2 cut(s) 824, 1138
BmiI GGNNCC 1 cut(s) 826
BmrFI CCNGG 3 cut(s) 439, 763, 816
BmrI ACTGGG 5 cut(s) 230, 522, 1230, 1252, 1741
BmsI GCATC 3 cut(s) 25, 599, 1054
BmuI ACTGGG 5 cut(s) 230, 522, 1230, 1252, 1741
BoxI GACNNNNGTC 1 cut(s) 1472
BpiI GAAGAC 1 cut(s) 1756
BplI GAGNNNNNCTC 2 cut(s) 83, 115
BpmI CTGGAG 3 cut(s) 185, 436, 440
Bpu10I CCTNAGC 1 cut(s) 806
BpuMI CCSGG 1 cut(s) 816
BsaHI GRCGYC 1 cut(s) 1367
BsaJI CCNNGG 1 cut(s) 395
Bsc4I CCNNNNNNNGG 4 cut(s) 513, 586, 821, 989
Bse1I ACTGG 6 cut(s) 236, 517, 1158, 1225, 1258, 1736
Bse3DI GCAATG 2 cut(s) 54, 789
BseBI CCWGG 2 cut(s) 439, 763
BseDI CCNNGG 1 cut(s) 395
BseGI GGATG 3 cut(s) 646, 1009, 1335
BseLI CCNNNNNNNGG 4 cut(s) 513, 586, 821, 989
BseMI GCAATG 2 cut(s) 54, 789
BseMII CTCAG 5 cut(s) 97, 290, 388, 1098, 1552
BseNI ACTGG 6 cut(s) 236, 517, 1158, 1225, 1258, 1736
BseSI GKGCMC 1 cut(s) 816
BseXI GCAGC 3 cut(s) 368, 781, 1677
BseYI CCCAGC 1 cut(s) 189
BsgI GTGCAG 2 cut(s) 367, 1337
BshFI GGCC 4 cut(s) 400, 880, 1139, 1759
BsiHKAI GWGCWC 2 cut(s) 96, 1535
BsiSI CCGG 1 cut(s) 816
BslFI GGGAC 1 cut(s) 1125
BslI CCNNNNNNNGG 4 cut(s) 513, 586, 821, 989
BsmAI GTCTC 1 cut(s) 1216
BsmFI GGGAC 1 cut(s) 1125
BsmI GAATGC 1 cut(s) 1558
BsnI GGCC 4 cut(s) 400, 880, 1139, 1759
Bsp1286I GDGCHC 3 cut(s) 96, 816, 1535
Bsp1407I TGTACA 2 cut(s) 1422, 1620
Bsp143I GATC 3 cut(s) 86, 571, 952
BspACI CCGC 3 cut(s) 337, 387, 599
BspANI GGCC 4 cut(s) 400, 880, 1139, 1759
BspCNI CTCAG 5 cut(s) 96, 289, 387, 1099, 1551
BspHI TCATGA 4 cut(s) 574, 745, 1362, 1524
BspLI GGNNCC 1 cut(s) 826
BspMI ACCTGC 1 cut(s) 1194
BspQI GCTCTTC 2 cut(s) 1004, 1523
BsrDI GCAATG 2 cut(s) 54, 789
BsrGI TGTACA 2 cut(s) 1422, 1620
BsrI ACTGG 6 cut(s) 236, 517, 1158, 1225, 1258, 1736
BssECI CCNNGG 1 cut(s) 395
BssMI GATC 3 cut(s) 86, 571, 952
BssNI GRCGYC 1 cut(s) 1367
Bst2UI CCWGG 2 cut(s) 439, 763
Bst4CI ACNGT 5 cut(s) 889, 984, 1283, 1354, 1755
Bst6I CTCTTC 5 cut(s) 38, 53, 552, 1004, 1523
BstACI GRCGYC 1 cut(s) 1367
BstAUI TGTACA 2 cut(s) 1422, 1620
BstC8I GCNNGC 1 cut(s) 812
BstDEI CTNAG 6 cut(s) 83, 276, 374, 806, 1107, 1538
BstF5I GGATG 3 cut(s) 646, 1009, 1335
BstKTI GATC 3 cut(s) 89, 574, 955
BstMAI GTCTC 1 cut(s) 1216
BstMBI GATC 3 cut(s) 86, 571, 952
BstMWI GCNNNNNNNGC 3 cut(s) 596, 716, 1123
BstNI CCWGG 2 cut(s) 439, 763
BstNSI RCATGY 1 cut(s) 1710
BstPAI GACNNNNGTC 1 cut(s) 1472
BstSCI CCNGG 3 cut(s) 437, 761, 814
BstSFI CTRYAG 1 cut(s) 1279
BstSLI GKGCMC 1 cut(s) 816
BstV1I GCAGC 3 cut(s) 368, 781, 1677
BstV2I GAAGAC 1 cut(s) 1756
BstXI CCANNNNNNTGG 1 cut(s) 1022
BsuRI GGCC 4 cut(s) 400, 880, 1139, 1759
BtsCI GGATG 3 cut(s) 646, 1009, 1335
BtsIMutI CAGTG 5 cut(s) 894, 1151, 1350, 1425, 1600
BveI ACCTGC 1 cut(s) 1194
Cac8I GCNNGC 1 cut(s) 812
CaiI CAGNNNCTG 1 cut(s) 381
CciI TCATGA 4 cut(s) 574, 745, 1362, 1524
Cfr13I GGNCC 2 cut(s) 824, 1138
CseI GACGC 1 cut(s) 1375
CsiI ACCWGGT 1 cut(s) 437
Csp6I GTAC 5 cut(s) 442, 787, 1057, 1423, 1621
CviQI GTAC 5 cut(s) 442, 787, 1057, 1423, 1621
DdeI CTNAG 6 cut(s) 83, 276, 374, 806, 1107, 1538
DpnI GATC 3 cut(s) 88, 573, 954
DpnII GATC 3 cut(s) 86, 571, 952
DraI TTTAAA 1 cut(s) 1176
Eam1104I CTCTTC 5 cut(s) 38, 53, 552, 1004, 1523
EarI CTCTTC 5 cut(s) 38, 53, 552, 1004, 1523
EciI GGCGGA 1 cut(s) 614
Ecl136II GAGCTC 2 cut(s) 94, 1533
Eco147I AGGCCT 1 cut(s) 400
Eco24I GRGCYC 2 cut(s) 96, 1535
Eco32I GATATC 1 cut(s) 1628
Eco47I GGWCC 1 cut(s) 824
Eco53kI GAGCTC 2 cut(s) 94, 1533
Eco57I CTGAAG 1 cut(s) 576
EcoICRI GAGCTC 2 cut(s) 94, 1533
EcoRI GAATTC 1 cut(s) 664
EcoRII CCWGG 2 cut(s) 437, 761
EcoRV GATATC 1 cut(s) 1628
EcoT38I GRGCYC 2 cut(s) 96, 1535
FaqI GGGAC 1 cut(s) 1125
FauNDI CATATG 1 cut(s) 1566
FbaI TGATCA 1 cut(s) 571
Fnu4HI GCNGC 3 cut(s) 382, 795, 1666
FokI GGATG 3 cut(s) 653, 1016, 1322
FriOI GRGCYC 2 cut(s) 96, 1535
Fsp4HI GCNGC 3 cut(s) 382, 795, 1666
FspBI CTAG 1 cut(s) 621
GluI GCNGC 3 cut(s) 382, 795, 1666
GsaI CCCAGC 1 cut(s) 193
GsuI CTGGAG 3 cut(s) 185, 436, 440
HaeIII GGCC 4 cut(s) 400, 880, 1139, 1759
HapII CCGG 1 cut(s) 816
HgaI GACGC 1 cut(s) 1375
Hin1I GRCGYC 1 cut(s) 1367
HindIII AAGCTT 1 cut(s) 1132
HinfI GANTC 6 cut(s) 463, 607, 697, 758, 1521, 1599
HpaII CCGG 1 cut(s) 816
HphI GGTGA 5 cut(s) 427, 1210, 1240, 1322, 1477
Hpy166II GTNNAC 5 cut(s) 67, 520, 1327, 1384, 1425
Hpy188I TCNGA 6 cut(s) 86, 91, 279, 468, 1162, 1541
Hpy8I GTNNAC 5 cut(s) 67, 520, 1327, 1384, 1425
HpyAV CCTTC 7 cut(s) 47, 318, 421, 631, 679, 969, 1380
HpyCH4III ACNGT 5 cut(s) 889, 984, 1283, 1354, 1755
HpyF10VI GCNNNNNNNGC 3 cut(s) 596, 716, 1123
HpyF3I CTNAG 6 cut(s) 83, 276, 374, 806, 1107, 1538
Hsp92I GRCGYC 1 cut(s) 1367
Ksp22I TGATCA 1 cut(s) 571
Kzo9I GATC 3 cut(s) 86, 571, 952
LguI GCTCTTC 2 cut(s) 1004, 1523
LmnI GCTCC 1 cut(s) 378
Lsp1109I GCAGC 3 cut(s) 368, 781, 1677
LweI GCATC 3 cut(s) 25, 599, 1054
MabI ACCWGGT 1 cut(s) 437
MaeI CTAG 1 cut(s) 621
MaeIII GTNAC 4 cut(s) 148, 1033, 1465, 1646
MalI GATC 3 cut(s) 88, 573, 954
MboI GATC 3 cut(s) 86, 571, 952
MfeI CAATTG 1 cut(s) 939
MhlI GDGCHC 3 cut(s) 96, 816, 1535
MlyI GAGTC 1 cut(s) 1608
MmeI TCCRAC 2 cut(s) 705, 1065
MseI TTAA 3 cut(s) 162, 1029, 1175
MslI CAYNNNNRTG 4 cut(s) 528, 750, 1196, 1344
MspI CCGG 1 cut(s) 816
MspR9I CCNGG 3 cut(s) 439, 763, 816
MunI CAATTG 1 cut(s) 939
Mva1269I GAATGC 1 cut(s) 1558
MvaI CCWGG 2 cut(s) 439, 763
MwoI GCNNNNNNNGC 3 cut(s) 596, 716, 1123
NciI CCSGG 1 cut(s) 816
NdeI CATATG 1 cut(s) 1566
NdeII GATC 3 cut(s) 86, 571, 952
NlaIV GGNNCC 1 cut(s) 826
NmeAIII GCCGAG 1 cut(s) 420
NmuCI GTSAC 1 cut(s) 1465
NspI RCATGY 1 cut(s) 1710
OliI CACNNNNGTG 1 cut(s) 1196
PagI TCATGA 4 cut(s) 574, 745, 1362, 1524
PceI AGGCCT 1 cut(s) 400
PciSI GCTCTTC 2 cut(s) 1004, 1523
PctI GAATGC 1 cut(s) 1558
PfeI GAWTC 5 cut(s) 463, 607, 697, 758, 1521
PflMI CCANNNNNTGG 1 cut(s) 586
PkrI GCNGC 3 cut(s) 383, 796, 1667
PleI GAGTC 1 cut(s) 1607
PpsI GAGTC 1 cut(s) 1607
PshAI GACNNNNGTC 1 cut(s) 1472
Psp124BI GAGCTC 2 cut(s) 96, 1535
Psp6I CCWGG 2 cut(s) 437, 761
PspFI CCCAGC 1 cut(s) 189
PspGI CCWGG 2 cut(s) 437, 761
PspN4I GGNNCC 1 cut(s) 826
PspPI GGNCC 2 cut(s) 824, 1138
PstNI CAGNNNCTG 1 cut(s) 381
RsaI GTAC 5 cut(s) 443, 788, 1058, 1424, 1622
RsaNI GTAC 5 cut(s) 442, 787, 1057, 1423, 1621
RseI CAYNNNNRTG 4 cut(s) 528, 750, 1196, 1344
SacI GAGCTC 2 cut(s) 96, 1535
SapI GCTCTTC 2 cut(s) 1004, 1523
SaqAI TTAA 3 cut(s) 162, 1029, 1175
SatI GCNGC 3 cut(s) 382, 795, 1666
Sau3AI GATC 3 cut(s) 86, 571, 952
Sau96I GGNCC 2 cut(s) 824, 1138
SchI GAGTC 1 cut(s) 1608
ScrFI CCNGG 3 cut(s) 439, 763, 816
SduI GDGCHC 3 cut(s) 96, 816, 1535
SexAI ACCWGGT 1 cut(s) 437
SfaNI GCATC 3 cut(s) 25, 599, 1054
SfcI CTRYAG 1 cut(s) 1279
SinI GGWCC 1 cut(s) 824
SmiMI CAYNNNNRTG 4 cut(s) 528, 750, 1196, 1344
SseBI AGGCCT 1 cut(s) 400
SsiI CCGC 3 cut(s) 337, 387, 599
SspI AATATT 1 cut(s) 1249
SspMI CTAG 1 cut(s) 621
SstI GAGCTC 2 cut(s) 96, 1535
StuI AGGCCT 1 cut(s) 400
StyD4I CCNGG 3 cut(s) 437, 761, 814
TaaI ACNGT 5 cut(s) 889, 984, 1283, 1354, 1755
TaqI TCGA 4 cut(s) 703, 972, 1238, 1519
TatI WGTACW 3 cut(s) 786, 1422, 1620
TfiI GAWTC 5 cut(s) 463, 607, 697, 758, 1521
Tru1I TTAA 3 cut(s) 162, 1029, 1175
Tru9I TTAA 3 cut(s) 162, 1029, 1175
TscAI CASTG 5 cut(s) 894, 1158, 1357, 1432, 1600
TseFI GTSAC 1 cut(s) 1465
TseI GCWGC 3 cut(s) 381, 794, 1665
Tsp45I GTSAC 1 cut(s) 1465
TspDTI ATGAA 7 cut(s) 438, 530, 734, 771, 1346, 1513, 1541
TspRI CASTG 5 cut(s) 894, 1158, 1357, 1432, 1600
Van91I CCANNNNNTGG 1 cut(s) 586
VpaK11BI GGWCC 1 cut(s) 824
XapI RAATTY 7 cut(s) 625, 664, 689, 1069, 1270, 1543, 1640
XbaI TCTAGA 1 cut(s) 620
XceI RCATGY 1 cut(s) 1710
XcmI CCANNNNNNNNNTGG 1 cut(s) 1728
XspI CTAG 1 cut(s) 621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.