Rorug05G0177200

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
16573363 .. 16576318
2956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0177200.1

Sequence Viewer

Length: 930 bp
ATGGCCGAAACTGACCTACCTGAAGATGTTATACTGAACATTTTGTCTTGGCTGCCCGTCAAATCCTTGATCCGATTCACCTCCGTTTCCAAACGCTTCCGATCCATCATATTGTACGACCCCAAATTAGCCAGAACTCAATTTGAAGCAGCTTGTCAGCGGAAAACCCTAAGTTGCCGACTCATCTTCCACACAGTCACCCGTCGCCTCGAATCCCTAGACTTGGATACACCGTCCTATGGAGACATTTCCTCCAGCAGAAAGCTGAGTTTCCCTTTCGAGGAACCGGGTTCGGATATCAGCCTGCTAGGCTCGTGCAATGGTTTGGTGTTTGTAGCGTTTGGTGAAGTCGACTTTTACATTTGGAACCCAGCAACCCGATTCTTCATGGAGTTGCCTAAGCCAGGTTTTTCTGACGGACTATGGCTCAGGTATTATGGTGCTGGCTATTTGTCTGCCACCGACGACTACAAAGTTTTCGCAGCCTCTTATGACGTGTATGGACCGACACGAGAGATGAAGATGTTCTCCTTGAGAGCTCACGTTTGGAAAACAATCCAACATCCTGGCCATGACAAAGCCTCTGATGAGGGGACTCTTTTGAATGAGGCAATTCATTGGTTAGTGGGGAATGAAATCCTTGCTTTTGATTTCGCACAGGAGGAGTTCAGGACTATGCGTCTGCCTGATCATCATGAGATTCAGGACCCATTTGGTGTTGGCTATGTTGGGGTTTCTGAGGGATGTCTGTGTGTATGCGGTCATCGGAGATCAGTTGCCGTAAAAGGGGTTGGCGGCGAGTGGTCGTTGGTTAAGATTGATCATAAAGAAGAGGAGAAGTTCCTTGTGTATACGACTGGAGGCACCTCGTTTGACCGCTACCGTAACATGATTCCATATGAAGAGAGTCTACTTCGAATTAATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

309

Amino Acids

35.28

Weight (kDa)

5.75

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 40 9.6e-11 F-box domain
F-box-like PF12937 5 - 46 8.2e-09 F-box-like
FBA_3 PF08268 83 - 233 3.9e-09 F-box associated beta propeller domain
FBA_1 PF07734 89 - 252 5.6e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 863
AccI GTMKAC 3 cut(s) 351, 851, 910
AciI CCGC 4 cut(s) 160, 759, 795, 877
AclWI GGATC 2 cut(s) 64, 96
AcoI YGGCCR 2 cut(s) 3, 568
AcuI CTGAAG 1 cut(s) 42
AfaI GTAC 1 cut(s) 116
AfiI CCNNNNNNNGG 5 cut(s) 223, 239, 280, 404, 786
AflIII ACRYGT 1 cut(s) 495
AgsI TTSAA 2 cut(s) 146, 604
AhdI GACNNNNNGTC 1 cut(s) 678
AjiI CACGTC 1 cut(s) 496
AjnI CCWGG 2 cut(s) 403, 565
AluBI AGCT 3 cut(s) 152, 265, 539
AluI AGCT 3 cut(s) 152, 265, 539
Alw21I GWGCWC 1 cut(s) 541
Alw26I GTCTC 1 cut(s) 237
AlwI GGATC 2 cut(s) 64, 96
AoxI GGCC 2 cut(s) 3, 568
ApeKI GCWGC 3 cut(s) 52, 149, 482
AseI ATTAAT 1 cut(s) 921
Asp700I GAANNNNTTC 1 cut(s) 524
AspS9I GGNCC 2 cut(s) 503, 706
AsuC2I CCSGG 1 cut(s) 288
AsuHPI GGTGA 3 cut(s) 70, 190, 356
AsuII TTCGAA 1 cut(s) 916
AvaII GGWCC 2 cut(s) 503, 706
BalI TGGCCA 1 cut(s) 570
BanI GGYRCC 1 cut(s) 863
BanII GRGCYC 1 cut(s) 541
BarI GAAGNNNNNNTAC 4 cut(s) 15, 47, 894, 926
BauI CACGAG 2 cut(s) 313, 510
Bbv12I GWGCWC 1 cut(s) 541
BbvI GCAGC 3 cut(s) 39, 161, 494
BccI CCATC 1 cut(s) 113
BceAI ACGGC 1 cut(s) 764
BciT130I CCWGG 2 cut(s) 405, 567
BciVI GTATCC 1 cut(s) 220
BclI TGATCA 2 cut(s) 688, 820
BcnI CCSGG 1 cut(s) 288
BcoDI GTCTC 1 cut(s) 237
BfaI CTAG 2 cut(s) 218, 308
BfuI GTATCC 1 cut(s) 220
BglI GCCNNNNNGGC 1 cut(s) 309
BisI GCNGC 4 cut(s) 53, 150, 483, 796
BlsI GCNGC 4 cut(s) 54, 151, 484, 797
Bme1390I CCNGG 3 cut(s) 288, 405, 567
Bme18I GGWCC 2 cut(s) 503, 706
BmeRI GACNNNNNGTC 1 cut(s) 678
BmgBI CACGTC 1 cut(s) 496
BmgT120I GGNCC 2 cut(s) 503, 706
BmiI GGNNCC 4 cut(s) 285, 368, 708, 865
BmrFI CCNGG 3 cut(s) 288, 405, 567
BpmI CTGGAG 2 cut(s) 238, 879
Bpu10I CCTNAGC 2 cut(s) 399, 428
Bpu14I TTCGAA 1 cut(s) 916
BpuEI CTTGAG 1 cut(s) 553
BpuMI CCSGG 1 cut(s) 288
BsaXI ACNNNNNCTCC 2 cut(s) 236, 266
Bsc4I CCNNNNNNNGG 5 cut(s) 223, 239, 280, 404, 786
Bse1I ACTGG 1 cut(s) 862
Bse3DI GCAATG 1 cut(s) 325
BseBI CCWGG 2 cut(s) 405, 567
BseGI GGATG 2 cut(s) 562, 749
BseLI CCNNNNNNNGG 5 cut(s) 223, 239, 280, 404, 786
BseMI GCAATG 1 cut(s) 325
BseMII CTCAG 3 cut(s) 257, 442, 729
BseNI ACTGG 1 cut(s) 862
BseRI GAGGAG 2 cut(s) 677, 848
BseXI GCAGC 3 cut(s) 39, 161, 494
BseYI CCCAGC 1 cut(s) 370
BshFI GGCC 2 cut(s) 5, 570
BshNI GGYRCC 1 cut(s) 863
BsiHKAI GWGCWC 1 cut(s) 541
BsiSI CCGG 1 cut(s) 287
BslFI GGGAC 1 cut(s) 607
BslI CCNNNNNNNGG 5 cut(s) 223, 239, 280, 404, 786
BsmAI GTCTC 1 cut(s) 237
BsmFI GGGAC 1 cut(s) 607
BsnI GGCC 2 cut(s) 5, 570
Bsp119I TTCGAA 1 cut(s) 916
Bsp1286I GDGCHC 1 cut(s) 541
Bsp143I GATC 5 cut(s) 69, 101, 688, 770, 820
BspACI CCGC 4 cut(s) 160, 759, 795, 877
BspANI GGCC 2 cut(s) 5, 570
BspCNI CTCAG 3 cut(s) 258, 441, 730
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 4 cut(s) 285, 368, 708, 865
BspPI GGATC 2 cut(s) 64, 96
BspT104I TTCGAA 1 cut(s) 916
BspT107I GGYRCC 1 cut(s) 863
BsrDI GCAATG 1 cut(s) 325
BsrI ACTGG 1 cut(s) 862
BssMI GATC 5 cut(s) 69, 101, 688, 770, 820
BssNAI GTATAC 1 cut(s) 852
BssSI CACGAG 2 cut(s) 313, 510
Bst1107I GTATAC 1 cut(s) 852
Bst2BI CACGAG 2 cut(s) 313, 510
Bst2UI CCWGG 2 cut(s) 405, 567
Bst4CI ACNGT 3 cut(s) 196, 234, 884
Bst6I CTCTTC 2 cut(s) 825, 897
BstBI TTCGAA 1 cut(s) 916
BstC8I GCNNGC 2 cut(s) 305, 445
BstDEI CTNAG 5 cut(s) 170, 266, 399, 428, 738
BstENI CCTNNNNNAGG 1 cut(s) 402
BstF5I GGATG 2 cut(s) 562, 749
BstKTI GATC 5 cut(s) 72, 104, 691, 773, 823
BstMAI GTCTC 1 cut(s) 237
BstMBI GATC 5 cut(s) 69, 101, 688, 770, 820
BstMWI GCNNNNNNNGC 1 cut(s) 309
BstNI CCWGG 2 cut(s) 405, 567
BstSCI CCNGG 3 cut(s) 286, 403, 565
BstV1I GCAGC 3 cut(s) 39, 161, 494
BstXI CCANNNNNNTGG 1 cut(s) 566
BstZ17I GTATAC 1 cut(s) 852
BsuI GTATCC 1 cut(s) 220
BsuRI GGCC 2 cut(s) 5, 570
BtrI CACGTC 1 cut(s) 496
BtsCI GGATG 2 cut(s) 562, 749
Cac8I GCNNGC 2 cut(s) 305, 445
CciI TCATGA 1 cut(s) 694
Cfr13I GGNCC 2 cut(s) 503, 706
CseI GACGC 1 cut(s) 668
Csp6I GTAC 1 cut(s) 115
CviAII CATG 4 cut(s) 388, 572, 695, 889
CviQI GTAC 1 cut(s) 115
DdeI CTNAG 5 cut(s) 170, 266, 399, 428, 738
DpnI GATC 5 cut(s) 71, 103, 690, 772, 822
DpnII GATC 5 cut(s) 69, 101, 688, 770, 820
DriI GACNNNNNGTC 1 cut(s) 678
EaeI YGGCCR 2 cut(s) 3, 568
Eam1104I CTCTTC 2 cut(s) 825, 897
Eam1105I GACNNNNNGTC 1 cut(s) 678
EarI CTCTTC 2 cut(s) 825, 897
Ecl136II GAGCTC 1 cut(s) 539
Eco24I GRGCYC 1 cut(s) 541
Eco32I GATATC 1 cut(s) 298
Eco47I GGWCC 2 cut(s) 503, 706
Eco53kI GAGCTC 1 cut(s) 539
Eco57I CTGAAG 1 cut(s) 42
EcoICRI GAGCTC 1 cut(s) 539
EcoNI CCTNNNNNAGG 1 cut(s) 402
EcoO109I RGGNCCY 1 cut(s) 706
EcoRII CCWGG 2 cut(s) 403, 565
EcoRV GATATC 1 cut(s) 298
EcoT38I GRGCYC 1 cut(s) 541
FaeI CATG 4 cut(s) 391, 575, 698, 892
FaqI GGGAC 1 cut(s) 607
FatI CATG 4 cut(s) 387, 571, 694, 888
FauNDI CATATG 1 cut(s) 898
FbaI TGATCA 2 cut(s) 688, 820
FblI GTMKAC 3 cut(s) 351, 851, 910
Fnu4HI GCNGC 4 cut(s) 53, 150, 483, 796
FokI GGATG 2 cut(s) 549, 756
FriOI GRGCYC 1 cut(s) 541
Fsp4HI GCNGC 4 cut(s) 53, 150, 483, 796
FspBI CTAG 2 cut(s) 218, 308
GluI GCNGC 4 cut(s) 53, 150, 483, 796
GsaI CCCAGC 1 cut(s) 374
GsuI CTGGAG 2 cut(s) 238, 879
HaeIII GGCC 2 cut(s) 5, 570
HapII CCGG 1 cut(s) 287
HgaI GACGC 1 cut(s) 668
Hin1II CATG 4 cut(s) 391, 575, 698, 892
HincII GTYRAC 1 cut(s) 352
HindII GTYRAC 1 cut(s) 352
HinfI GANTC 8 cut(s) 75, 180, 212, 381, 595, 700, 892, 907
HpaII CCGG 1 cut(s) 287
HphI GGTGA 3 cut(s) 70, 190, 356
Hpy166II GTNNAC 3 cut(s) 352, 852, 911
Hpy188I TCNGA 7 cut(s) 74, 101, 295, 415, 586, 739, 768
Hpy188III TCNNGA 3 cut(s) 670, 695, 704
Hpy8I GTNNAC 3 cut(s) 352, 852, 911
Hpy99I CGWCG 2 cut(s) 207, 467
HpyCH4III ACNGT 3 cut(s) 196, 234, 884
HpyCH4IV ACGT 2 cut(s) 495, 543
HpyCH4V TGCA 1 cut(s) 318
HpyF10VI GCNNNNNNNGC 1 cut(s) 309
HpyF3I CTNAG 5 cut(s) 170, 266, 399, 428, 738
HpySE526I ACGT 2 cut(s) 495, 543
Hsp92II CATG 4 cut(s) 391, 575, 698, 892
Ksp22I TGATCA 2 cut(s) 688, 820
Kzo9I GATC 5 cut(s) 69, 101, 688, 770, 820
Lsp1109I GCAGC 3 cut(s) 39, 161, 494
MaeI CTAG 2 cut(s) 218, 308
MaeII ACGT 2 cut(s) 495, 543
MaeIII GTNAC 2 cut(s) 196, 884
MalI GATC 5 cut(s) 71, 103, 690, 772, 822
MboI GATC 5 cut(s) 69, 101, 688, 770, 820
MboII GAAGA 6 cut(s) 35, 178, 376, 532, 842, 914
MhlI GDGCHC 1 cut(s) 541
MlsI TGGCCA 1 cut(s) 570
MluCI AATT 5 cut(s) 125, 140, 612, 918, 922
MluNI TGGCCA 1 cut(s) 570
MlyI GAGTC 3 cut(s) 174, 589, 916
MmeI TCCRAC 1 cut(s) 583
Mox20I TGGCCA 1 cut(s) 570
MroXI GAANNNNTTC 1 cut(s) 524
MscI TGGCCA 1 cut(s) 570
MseI TTAA 2 cut(s) 813, 921
Msp20I TGGCCA 1 cut(s) 570
MspA1I CMGCKG 1 cut(s) 160
MspI CCGG 1 cut(s) 287
MspR9I CCNGG 3 cut(s) 288, 405, 567
MvaI CCWGG 2 cut(s) 405, 567
MwoI GCNNNNNNNGC 1 cut(s) 309
NciI CCSGG 1 cut(s) 288
NdeI CATATG 1 cut(s) 898
NdeII GATC 5 cut(s) 69, 101, 688, 770, 820
NlaIII CATG 4 cut(s) 391, 575, 698, 892
NlaIV GGNNCC 4 cut(s) 285, 368, 708, 865
NmuCI GTSAC 1 cut(s) 196
NspV TTCGAA 1 cut(s) 916
PagI TCATGA 1 cut(s) 694
PdmI GAANNNNTTC 1 cut(s) 524
PfeI GAWTC 5 cut(s) 75, 212, 381, 700, 892
PkrI GCNGC 4 cut(s) 54, 151, 484, 797
PleI GAGTC 3 cut(s) 174, 589, 915
PpsI GAGTC 3 cut(s) 174, 589, 915
PpuMI RGGWCCY 1 cut(s) 706
PshBI ATTAAT 1 cut(s) 921
Psp124BI GAGCTC 1 cut(s) 541
Psp5II RGGWCCY 1 cut(s) 706
Psp6I CCWGG 2 cut(s) 403, 565
PspFI CCCAGC 1 cut(s) 370
PspGI CCWGG 2 cut(s) 403, 565
PspN4I GGNNCC 4 cut(s) 285, 368, 708, 865
PspPI GGNCC 2 cut(s) 503, 706
PspPPI RGGWCCY 1 cut(s) 706
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
SacI GAGCTC 1 cut(s) 541
SalI GTCGAC 1 cut(s) 350
SaqAI TTAA 2 cut(s) 813, 921
SatI GCNGC 4 cut(s) 53, 150, 483, 796
Sau3AI GATC 5 cut(s) 69, 101, 688, 770, 820
Sau96I GGNCC 2 cut(s) 503, 706
SchI GAGTC 3 cut(s) 174, 589, 916
ScrFI CCNGG 3 cut(s) 288, 405, 567
SduI GDGCHC 1 cut(s) 541
SfuI TTCGAA 1 cut(s) 916
SinI GGWCC 2 cut(s) 503, 706
SmlI CTYRAG 1 cut(s) 532
SmoI CTYRAG 1 cut(s) 532
Sse9I AATT 5 cut(s) 125, 140, 612, 918, 922
SsiI CCGC 4 cut(s) 160, 759, 795, 877
SspMI CTAG 2 cut(s) 218, 308
SstI GAGCTC 1 cut(s) 541
StyD4I CCNGG 3 cut(s) 286, 403, 565
TaaI ACNGT 3 cut(s) 196, 234, 884
TaiI ACGT 2 cut(s) 498, 546
TaqI TCGA 4 cut(s) 210, 279, 351, 916
TaqII GACCGA 1 cut(s) 520
TasI AATT 5 cut(s) 125, 140, 612, 918, 922
TauI GCSGC 1 cut(s) 798
TfiI GAWTC 5 cut(s) 75, 212, 381, 700, 892
Tru1I TTAA 2 cut(s) 813, 921
Tru9I TTAA 2 cut(s) 813, 921
TseFI GTSAC 1 cut(s) 196
TseI GCWGC 3 cut(s) 52, 149, 482
Tsp45I GTSAC 1 cut(s) 196
TspDTI ATGAA 5 cut(s) 376, 533, 605, 648, 915
TspGWI ACGGA 2 cut(s) 73, 432
VpaK11BI GGWCC 2 cut(s) 503, 706
VspI ATTAAT 1 cut(s) 921
XagI CCTNNNNNAGG 1 cut(s) 402
XmiI GTMKAC 3 cut(s) 351, 851, 910
XmnI GAANNNNTTC 1 cut(s) 524
XspI CTAG 2 cut(s) 218, 308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.