Rmu_sc0006609.1_g000007

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006609.1
Physical Location & Seq
Reverse (-)
30731 .. 34333
3603 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006609.1_g000007.1.cds

Sequence Viewer

Length: 3231 bp
atgcttcggtggcagcaggctggaacgcagggctgcaggaagggggcagcaggggctgctgtgcaaggttgcaagcacacgggcgctcgggctgcagcgaaggctcggctagctcgggctaggggctgctttatgttcaagaaattctccaagaaggtcttttctccttggtttcaagcttttgagaaagcagtggactcccagatagaggacattatggtgagactagaattccttgcaaaacaaaaggatgtcctcaatttgaaagcagatacaagacgcagaatatcacaaactctaccttcaacttctttggtagaagactttggtctgtatgggagggatgaggacaaggagacgatcattaagttattgttatcagatgattcgacaagcagtaaaataagtgtgattcccattgtcggcatgggtgggattgggaagacaactcttgctcagcttgtatacaatgacagtagagtgaagcagcattttgacctccacgcgtgggtttgcgtttcagaagaatttgatattgttagaatgacacaaacaatatacgggtcactcacttcacaaaattgtgatatcacagacctaaatatgcttcaagttagactcaaggaggctttaagtgggaagaagttcttctttgttcatgatgatgtttggaacgagaattacagtcaatgggatgccttaaggcgaccctttgagtctgcagcacctggaagtaagatcattgtcacaacacgcaatgcaagtgttgcatctatgatgtgtaatcttcaaactcatcatctaactcaaatatctgaggaggattgttggctgttgtttgcaaaacatgtcttcaaaagtggagttaatgcagatccaaatcttgaagaaatcggaaaacagatcgtcagaaagtgtaaaggcctgccattggctgcaaaatcacttggcagtctcttatgctccgaatcaaatattgaggaatgggaaaatgtgctaaaacatgacatatggcagttttcagataaggagactaccattctgccagctctatggttgagctaccattatctgcctcgacatctcaaacgttgttttgcctactgctcagtatttcccaaagatttttcttttacaaaatcaaaattggtttttctttggatggccgaagatctcctgcaacccaaaaatatgaaaactgcagaagaagttggagaggactacttcgatgatctcctctcaaggtcattttttcagcactcacaaggggactttgatcaccaatctgtattcaccatgcatgaccttatcaatgatttggcaaagtttgtgtctggagatttttgtgttaggctggaggacagtgactcattagacattgcgagcaaggtgagcaaggctcggcatttttcgtacatgaaaacatatggtgatggctttgagaaatttgaggctttgtatgatgctaagcatttgcgcactttcctaccattatcccagaggaatccaattactgcacagttccaaatgtccgacaagatactgcttgatctgctgtcacaactgcaatgtttgagagtgcttaatttatcaggatacaatatccgagagttgcctaattcaatcggcaatctgaaacagttaaagcacttggacatgtcttacacttcaatagaaaagttgcctgaaccagtatgtacgttgtataacttacaagcattattgctgtcatattgtcgaggtcttgttcagttgccaaccaacttggagaggttaattaacttgcgccatcttgatatcagaggtacaaagatagaacagatgccaccgcaaatgggaaagttgaaagatctccaaacattaagtaactttccgatagacaaggctgcagggtatcatgatatagtagagttaaaggagctacagaagttgcgcggaactctttgtatttcaggacttcataatattgttagtgtctctgatgttttggaagccaatatgagggacaagaagtatctgaatcaactatttctgaaatggggtggtgctacggacgattcaataagagatcgaaaagtgctggaaaacctccaacctcatacaaacctgaaagaactcatgattgtttcttatgagggtacaagattcccggattggttagtacatcattcttactctaacctgtattctcttcaacttttgaattgtcaaaactgttacttcttgccaccactaggacagctaccctccctgagagagcttgaaattattggattgaatggagtggtctcaataggtcctgagttttatggtgctacttgtgtatttaagccatttggagctttgcaagttctgaaattcgaaaatatgcgggagtggcagaagtggtcttatgttggaggtaacgaagaaggaggagcttttcctaatcttcatgagcttcgtctgcggaattgtccaaagttaaatgggagattaccattagactactttccaaagcttaaaacactagttgtgtgtcggactaacatatattctctcacttttgcgcaagaaactacatgtgaggaactccaattcctcgattacatgtatatatactgcccaaattttgtttgtttccccagtggagggctgcatgcgcccaacttgaccaagatacatatcgtccggtgcaagaaactgaggtccttaccggaagagatgcacacccttctcccttttctccagtctgtggagataaaggattgtccggaattggagtcatttccagaagggggattgccatcaaaactgaaatcacttcacgttgagtcatgcaaaaagctcattgcaaaccgcatgcagtgggggcttcaaaggctcgtgtctctcgaatacttgctagtcaactttggagattgtgaagaagtatgttcatttccagaggagggcctgctacctgccactcttacttcgctctccatctccactctgtctggcgttagaacaatggaaggcaaaggttttagaaagctcacctctcttcaaagcttggcaattcggagatgccctgagctgcagtgcttgccagacgaaggactacccacttctctatctcttctagagatcttctactgtcctttactaaaacaacggtaccaacgagataaaggggaggactggcccaagattgctcacattcgtcacataatgattgatggggaacatatacaacatgggatctcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1076

Amino Acids

122.76

Weight (kDa)

7.81

Isoelectric Point (pI)

45.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 1478, 2550
Acc36I ACCTGC 1 cut(s) 2950
Acc65I GGTACC 1 cut(s) 3138
AccB1I GGYRCC 1 cut(s) 3138
AccB7I CCANNNNNTGG 1 cut(s) 2734
AccI GTMKAC 1 cut(s) 465
AccII CGCG 2 cut(s) 506, 1935
AccIII TCCGGA 1 cut(s) 2752
AciI CCGC 5 cut(s) 1829, 1935, 2371, 2449, 2839
AclI AACGTT 1 cut(s) 1090
AclWI GGATC 2 cut(s) 869, 3230
AcoI YGGCCR 1 cut(s) 1164
AcsI RAATTY 6 cut(s) 143, 230, 527, 1445, 2357, 2608
AfaI GTAC 6 cut(s) 1415, 1699, 1807, 2140, 2163, 3140
AflII CTTAAG 1 cut(s) 700
AflIII ACRYGT 5 cut(s) 504, 847, 1656, 2561, 2589
AhlI ACTAGT 1 cut(s) 2509
AjnI CCWGG 1 cut(s) 727
AloI GAACNNNNNNTCC 2 cut(s) 2562, 2594
Alw26I GTCTC 7 cut(s) 217, 350, 959, 1025, 1981, 2293, 2874
AlwI GGATC 2 cut(s) 869, 3230
AlwNI CAGNNNCTG 2 cut(s) 56, 728
Ama87I CYCGRG 2 cut(s) 87, 114
Aor13HI TCCGGA 1 cut(s) 2752
AoxI GGCC 4 cut(s) 922, 1164, 2932, 3164
ApoI RAATTY 6 cut(s) 143, 230, 527, 1445, 2357, 2608
ArsI GACNNNNNNTTYG 2 cut(s) 1316, 1348
Asp700I GAANNNNTTC 2 cut(s) 644, 647
Asp718I GGTACC 1 cut(s) 3138
AspLEI GCGC 6 cut(s) 86, 1479, 1788, 1935, 2551, 2644
AspS9I GGNCC 4 cut(s) 2297, 2688, 2932, 3165
AsuC2I CCSGG 1 cut(s) 2150
AsuHPI GGTGA 6 cut(s) 232, 1271, 1285, 1402, 1442, 3010
AsuII TTCGAA 1 cut(s) 2361
AsuNHI GCTAGC 1 cut(s) 109
AvaI CYCGRG 2 cut(s) 87, 114
AvaII GGWCC 2 cut(s) 2297, 2688
BaeI ACNNNNGTAYC 2 cut(s) 3122, 3155
BanI GGYRCC 1 cut(s) 3138
BauI CACGAG 1 cut(s) 2864
BbsI GAAGAC 3 cut(s) 327, 449, 844
BccI CCATC 6 cut(s) 1156, 1427, 1797, 2794, 2972, 3194
BciT130I CCWGG 1 cut(s) 729
BciVI GTATCC 1 cut(s) 1589
BclI TGATCA 1 cut(s) 1276
BcnI CCSGG 1 cut(s) 2150
BcoDI GTCTC 7 cut(s) 217, 350, 959, 1025, 1981, 2293, 2874
BcuI ACTAGT 1 cut(s) 2509
BfaI CTAG 7 cut(s) 110, 120, 227, 2234, 2510, 2885, 3104
BfmI CTRYAG 7 cut(s) 34, 93, 720, 1200, 1887, 1922, 3059
BfoI RGCGCY 1 cut(s) 87
BfrI CTTAAG 1 cut(s) 700
BfuAI ACCTGC 1 cut(s) 2950
BfuI GTATCC 1 cut(s) 1589
BglII AGATCT 3 cut(s) 1171, 1849, 3108
BlpI GCTNAGC 2 cut(s) 456, 1467
Bme1390I CCNGG 2 cut(s) 729, 2150
Bme18I GGWCC 2 cut(s) 2297, 2688
BmeT110I CYCGRG 2 cut(s) 87, 114
BmgT120I GGNCC 4 cut(s) 2297, 2688, 2932, 3165
BmiI GGNNCC 1 cut(s) 3140
BmrFI CCNGG 2 cut(s) 729, 2150
BmrI ACTGGG 1 cut(s) 2619
BmsI GCATC 6 cut(s) 685, 779, 1453, 1812, 2694, 3038
BmtI GCTAGC 1 cut(s) 113
BmuI ACTGGG 1 cut(s) 2619
BoxI GACNNNNGTC 1 cut(s) 327
BpiI GAAGAC 3 cut(s) 327, 449, 844
BplI GAGNNNNNCTC 2 cut(s) 1384, 1416
BpmI CTGGAG 3 cut(s) 1356, 1376, 2711
Bpu10I CCTNAGC 1 cut(s) 3054
Bpu1102I GCTNAGC 2 cut(s) 456, 1467
Bpu14I TTCGAA 1 cut(s) 2361
BpuEI CTTGAG 2 cut(s) 605, 1225
BpuMI CCSGG 1 cut(s) 2150
BsaBI GATNNNNATC 3 cut(s) 879, 2663, 2785
BsaI GGTCTC 1 cut(s) 2293
BsaJI CCNNGG 1 cut(s) 167
BsaWI WCCGGW 3 cut(s) 2670, 2695, 2752
Bse1I ACTGG 4 cut(s) 1691, 2625, 2728, 3167
Bse3DI GCAATG 4 cut(s) 763, 1377, 1574, 2829
Bse8I GATNNNNATC 3 cut(s) 879, 2663, 2785
BseAI TCCGGA 1 cut(s) 2752
BseBI CCWGG 1 cut(s) 729
BseDI CCNNGG 1 cut(s) 167
BseGI GGATG 4 cut(s) 256, 349, 700, 1167
BseJI GATNNNNATC 3 cut(s) 879, 2663, 2785
BseMI GCAATG 4 cut(s) 763, 1377, 1574, 2829
BseMII CTCAG 7 cut(s) 470, 807, 1122, 2243, 2292, 2675, 3045
BseNI ACTGG 4 cut(s) 1691, 2625, 2728, 3167
BseRI GAGGAG 4 cut(s) 833, 1226, 2430, 2942
BsgI GTGCAG 1 cut(s) 1500
Bsh1236I CGCG 2 cut(s) 506, 1935
BshFI GGCC 4 cut(s) 924, 1166, 2934, 3166
BshNI GGYRCC 1 cut(s) 3138
BsiHKCI CYCGRG 2 cut(s) 87, 114
BsiSI CCGG 4 cut(s) 2150, 2671, 2696, 2753
BslFI GGGAC 2 cut(s) 1283, 2018
BsmAI GTCTC 7 cut(s) 217, 350, 959, 1025, 1981, 2293, 2874
BsmBI CGTCTC 1 cut(s) 350
BsmFI GGGAC 2 cut(s) 1283, 2018
BsnI GGCC 4 cut(s) 924, 1166, 2934, 3166
Bso31I GGTCTC 1 cut(s) 2293
BsoBI CYCGRG 2 cut(s) 87, 114
Bsp119I TTCGAA 1 cut(s) 2361
Bsp13I TCCGGA 1 cut(s) 2752
Bsp1720I GCTNAGC 2 cut(s) 456, 1467
BspACI CCGC 5 cut(s) 1829, 1935, 2371, 2449, 2839
BspANI GGCC 4 cut(s) 924, 1166, 2934, 3166
BspCNI CTCAG 7 cut(s) 469, 808, 1121, 2244, 2293, 2676, 3046
BspEI TCCGGA 1 cut(s) 2752
BspFNI CGCG 2 cut(s) 506, 1935
BspHI TCATGA 4 cut(s) 658, 1897, 2118, 2434
BspLI GGNNCC 1 cut(s) 3140
BspMAI CTGCAG 6 cut(s) 38, 97, 724, 1204, 1891, 3063
BspMI ACCTGC 1 cut(s) 2950
BspOI GCTAGC 1 cut(s) 113
BspPI GGATC 2 cut(s) 869, 3230
BspT104I TTCGAA 1 cut(s) 2361
BspT107I GGYRCC 1 cut(s) 3138
BspTI CTTAAG 1 cut(s) 700
BspTNI GGTCTC 1 cut(s) 2293
BsrDI GCAATG 4 cut(s) 763, 1377, 1574, 2829
BsrI ACTGG 4 cut(s) 1691, 2625, 2728, 3167
BssECI CCNNGG 1 cut(s) 167
BssNAI GTATAC 1 cut(s) 466
BssSI CACGAG 1 cut(s) 2864
BssT1I CCWWGG 1 cut(s) 167
Bst1107I GTATAC 1 cut(s) 466
Bst2BI CACGAG 1 cut(s) 2864
Bst2UI CCWGG 1 cut(s) 729
Bst4CI ACNGT 8 cut(s) 476, 686, 1364, 1521, 1641, 2216, 3119, 3138
Bst6I CTCTTC 4 cut(s) 2196, 2694, 3030, 3105
BstAFI CTTAAG 1 cut(s) 700
BstAPI GCANNNNNTGC 3 cut(s) 56, 767, 3067
BstBI TTCGAA 1 cut(s) 2361
BstDEI CTNAG 8 cut(s) 456, 816, 1108, 1467, 2252, 2301, 2684, 3054
BstF5I GGATG 4 cut(s) 256, 349, 700, 1167
BstFNI CGCG 2 cut(s) 506, 1935
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 6 cut(s) 86, 1479, 1788, 1935, 2551, 2644
BstMAI GTCTC 7 cut(s) 217, 350, 959, 1025, 1981, 2293, 2874
BstNI CCWGG 1 cut(s) 729
BstNSI RCATGY 6 cut(s) 851, 1660, 2565, 2593, 2642, 2845
BstPAI GACNNNNGTC 1 cut(s) 327
BstSCI CCNGG 2 cut(s) 727, 2148
BstSFI CTRYAG 7 cut(s) 34, 93, 720, 1200, 1887, 1922, 3059
BstUI CGCG 2 cut(s) 506, 1935
BstV2I GAAGAC 3 cut(s) 327, 449, 844
BstX2I RGATCY 5 cut(s) 874, 1171, 1849, 3108, 3222
BstXI CCANNNNNNTGG 1 cut(s) 1053
BstYI RGATCY 5 cut(s) 874, 1171, 1849, 3108, 3222
BstZ17I GTATAC 1 cut(s) 466
BsuI GTATCC 1 cut(s) 1589
BsuRI GGCC 4 cut(s) 924, 1166, 2934, 3166
BtsCI GGATG 4 cut(s) 256, 349, 700, 1167
BtsI GCAGTG 3 cut(s) 198, 2852, 3068
BtsIMutI CAGTG 5 cut(s) 198, 1369, 2632, 2852, 3068
BveI ACCTGC 1 cut(s) 2950
CaiI CAGNNNCTG 2 cut(s) 56, 728
CciI TCATGA 4 cut(s) 658, 1897, 2118, 2434
CfoI GCGC 6 cut(s) 86, 1479, 1788, 1935, 2551, 2644
Cfr13I GGNCC 4 cut(s) 2297, 2688, 2932, 3165
CseI GACGC 1 cut(s) 288
Csp6I GTAC 6 cut(s) 1414, 1698, 1806, 2139, 2162, 3139
CviQI GTAC 6 cut(s) 1414, 1698, 1806, 2139, 2162, 3139
DdeI CTNAG 8 cut(s) 456, 816, 1108, 1467, 2252, 2301, 2684, 3054
EaeI YGGCCR 1 cut(s) 1164
Eam1104I CTCTTC 4 cut(s) 2196, 2694, 3030, 3105
EarI CTCTTC 4 cut(s) 2196, 2694, 3030, 3105
Eco130I CCWWGG 1 cut(s) 167
Eco147I AGGCCT 1 cut(s) 924
Eco31I GGTCTC 1 cut(s) 2293
Eco32I GATATC 2 cut(s) 589, 1798
Eco47I GGWCC 2 cut(s) 2297, 2688
Eco88I CYCGRG 2 cut(s) 87, 114
EcoO109I RGGNCCY 3 cut(s) 2297, 2688, 2932
EcoRI GAATTC 1 cut(s) 230
EcoRII CCWGG 1 cut(s) 727
EcoRV GATATC 2 cut(s) 589, 1798
EcoT14I CCWWGG 1 cut(s) 167
EcoT22I ATGCAT 1 cut(s) 1302
ErhI CCWWGG 1 cut(s) 167
Esp3I CGTCTC 1 cut(s) 350
FalI AAGNNNNNCTT 6 cut(s) 143, 175, 632, 664, 635, 667
FaqI GGGAC 2 cut(s) 1283, 2018
FauI CCCGC 1 cut(s) 2364
FauNDI CATATG 2 cut(s) 1010, 1426
FbaI TGATCA 1 cut(s) 1276
FblI GTMKAC 1 cut(s) 465
FokI GGATG 4 cut(s) 263, 356, 707, 1174
FspBI CTAG 7 cut(s) 110, 120, 227, 2234, 2510, 2885, 3104
FspI TGCGCA 2 cut(s) 1478, 2550
GlaI GCGC 6 cut(s) 85, 1478, 1787, 1934, 2550, 2643
GsuI CTGGAG 3 cut(s) 1356, 1376, 2711
HaeII RGCGCY 1 cut(s) 87
HaeIII GGCC 4 cut(s) 924, 1166, 2934, 3166
HapII CCGG 4 cut(s) 2150, 2671, 2696, 2753
HgaI GACGC 1 cut(s) 288
HhaI GCGC 6 cut(s) 86, 1479, 1788, 1935, 2551, 2644
Hin6I GCGC 6 cut(s) 84, 1477, 1786, 1933, 2549, 2642
HinP1I GCGC 6 cut(s) 84, 1477, 1786, 1933, 2549, 2642
HincII GTYRAC 1 cut(s) 2890
HindII GTYRAC 1 cut(s) 2890
HindIII AAGCTT 3 cut(s) 177, 2498, 3031
HpaII CCGG 4 cut(s) 2150, 2671, 2696, 2753
HphI GGTGA 6 cut(s) 232, 1271, 1285, 1402, 1442, 3010
Hpy166II GTNNAC 3 cut(s) 196, 466, 2890
Hpy8I GTNNAC 3 cut(s) 196, 466, 2890
HpyAV CCTTC 9 cut(s) 34, 94, 148, 312, 2405, 2723, 2768, 2990, 3071
HpyCH4III ACNGT 8 cut(s) 476, 686, 1364, 1521, 1641, 2216, 3119, 3138
HpyCH4IV ACGT 3 cut(s) 1090, 1700, 2808
HpyF3I CTNAG 8 cut(s) 456, 816, 1108, 1467, 2252, 2301, 2684, 3054
HpySE526I ACGT 3 cut(s) 1090, 1700, 2808
HspAI GCGC 6 cut(s) 84, 1477, 1786, 1933, 2549, 2642
Kpn2I TCCGGA 1 cut(s) 2752
KpnI GGTACC 1 cut(s) 3142
Ksp22I TGATCA 1 cut(s) 1276
LmnI GCTCC 4 cut(s) 968, 1918, 2339, 2417
LweI GCATC 6 cut(s) 685, 779, 1453, 1812, 2694, 3038
MaeI CTAG 7 cut(s) 110, 120, 227, 2234, 2510, 2885, 3104
MaeII ACGT 3 cut(s) 1090, 1700, 2808
MaeIII GTNAC 8 cut(s) 564, 745, 1364, 1557, 1865, 2216, 2402, 3185
MflI RGATCY 5 cut(s) 874, 1171, 1849, 3108, 3222
MluI ACGCGT 1 cut(s) 504
MlyI GAGTC 6 cut(s) 191, 612, 725, 1361, 2771, 2822
MmeI TCCRAC 5 cut(s) 1192, 1557, 2116, 2377, 2501
Mph1103I ATGCAT 1 cut(s) 1302
MroI TCCGGA 1 cut(s) 2752
MroXI GAANNNNTTC 2 cut(s) 644, 647
MslI CAYNNNNRTG 2 cut(s) 218, 663
MspCI CTTAAG 1 cut(s) 700
MspI CCGG 4 cut(s) 2150, 2671, 2696, 2753
MspR9I CCNGG 2 cut(s) 729, 2150
MvaI CCWGG 1 cut(s) 729
MvnI CGCG 2 cut(s) 506, 1935
NciI CCSGG 1 cut(s) 2150
NdeI CATATG 2 cut(s) 1010, 1426
NheI GCTAGC 1 cut(s) 109
NlaIV GGNNCC 1 cut(s) 3140
NmeAIII GCCGAG 2 cut(s) 85, 1381
NmuCI GTSAC 5 cut(s) 564, 745, 1364, 1557, 3185
NsbI TGCGCA 2 cut(s) 1478, 2550
NsiI ATGCAT 1 cut(s) 1302
NspI RCATGY 6 cut(s) 851, 1660, 2565, 2593, 2642, 2845
NspV TTCGAA 1 cut(s) 2361
PacI TTAATTAA 1 cut(s) 1779
PaeI GCATGC 2 cut(s) 2642, 2845
PagI TCATGA 4 cut(s) 658, 1897, 2118, 2434
PceI AGGCCT 1 cut(s) 924
PciI ACATGT 4 cut(s) 847, 1656, 2561, 2589
PcsI WCGNNNNNNNCGW 2 cut(s) 2871, 3142
PdmI GAANNNNTTC 2 cut(s) 644, 647
PfeI GAWTC 7 cut(s) 386, 412, 968, 1504, 2020, 2057, 2145
PflMI CCANNNNNTGG 1 cut(s) 2734
PfoI TCCNGGA 1 cut(s) 2148
PleI GAGTC 6 cut(s) 191, 612, 724, 1361, 2770, 2821
PpsI GAGTC 6 cut(s) 191, 612, 724, 1361, 2770, 2821
PpuMI RGGWCCY 2 cut(s) 2297, 2688
PscI ACATGT 4 cut(s) 847, 1656, 2561, 2589
PshAI GACNNNNGTC 1 cut(s) 327
Psp1406I AACGTT 1 cut(s) 1090
Psp5II RGGWCCY 2 cut(s) 2297, 2688
Psp6I CCWGG 1 cut(s) 727
PspGI CCWGG 1 cut(s) 727
PspN4I GGNNCC 1 cut(s) 3140
PspPI GGNCC 4 cut(s) 2297, 2688, 2932, 3165
PspPPI RGGWCCY 2 cut(s) 2297, 2688
PsrI GAACNNNNNNTAC 2 cut(s) 665, 697
PstI CTGCAG 6 cut(s) 38, 97, 724, 1204, 1891, 3063
PstNI CAGNNNCTG 2 cut(s) 56, 728
PsuI RGATCY 5 cut(s) 874, 1171, 1849, 3108, 3222
RsaI GTAC 6 cut(s) 1415, 1699, 1807, 2140, 2163, 3140
RsaNI GTAC 6 cut(s) 1414, 1698, 1806, 2139, 2162, 3139
RseI CAYNNNNRTG 2 cut(s) 218, 663
Sau96I GGNCC 4 cut(s) 2297, 2688, 2932, 3165
SchI GAGTC 6 cut(s) 191, 612, 725, 1361, 2771, 2822
ScrFI CCNGG 2 cut(s) 729, 2150
SfaNI GCATC 6 cut(s) 685, 779, 1453, 1812, 2694, 3038
SfcI CTRYAG 7 cut(s) 34, 93, 720, 1200, 1887, 1922, 3059
SfuI TTCGAA 1 cut(s) 2361
SinI GGWCC 2 cut(s) 2297, 2688
SmiMI CAYNNNNRTG 2 cut(s) 218, 663
SmlI CTYRAG 3 cut(s) 620, 700, 1240
SmoI CTYRAG 3 cut(s) 620, 700, 1240
SpeI ACTAGT 1 cut(s) 2509
SphI GCATGC 2 cut(s) 2642, 2845
SseBI AGGCCT 1 cut(s) 924
SsiI CCGC 5 cut(s) 1829, 1935, 2371, 2449, 2839
SspI AATATT 2 cut(s) 976, 1966
SspMI CTAG 7 cut(s) 110, 120, 227, 2234, 2510, 2885, 3104
StuI AGGCCT 1 cut(s) 924
StyD4I CCNGG 2 cut(s) 727, 2148
StyI CCWWGG 1 cut(s) 167
TaaI ACNGT 8 cut(s) 476, 686, 1364, 1521, 1641, 2216, 3119, 3138
TaiI ACGT 3 cut(s) 1093, 1703, 2811
TaqI TCGA 8 cut(s) 389, 1078, 1227, 1738, 2071, 2361, 2583, 2874
TatI WGTACW 1 cut(s) 2161
TfiI GAWTC 7 cut(s) 386, 412, 968, 1504, 2020, 2057, 2145
TscAI CASTG 5 cut(s) 198, 1369, 2632, 2852, 3068
TseFI GTSAC 5 cut(s) 564, 745, 1364, 1557, 3185
Tsp45I GTSAC 5 cut(s) 564, 745, 1364, 1557, 3185
TspDTI ATGAA 6 cut(s) 647, 1208, 1433, 1949, 2423, 2907
TspGWI ACGGA 1 cut(s) 2066
TspRI CASTG 5 cut(s) 198, 1369, 2632, 2852, 3068
Van91I CCANNNNNTGG 1 cut(s) 2734
Vha464I CTTAAG 1 cut(s) 700
VpaK11BI GGWCC 2 cut(s) 2297, 2688
XapI RAATTY 6 cut(s) 143, 230, 527, 1445, 2357, 2608
XbaI TCTAGA 1 cut(s) 3103
XceI RCATGY 6 cut(s) 851, 1660, 2565, 2593, 2642, 2845
XcmI CCANNNNNNNNNTGG 1 cut(s) 424
XmiI GTMKAC 1 cut(s) 465
XmnI GAANNNNTTC 2 cut(s) 644, 647
XspI CTAG 7 cut(s) 110, 120, 227, 2234, 2510, 2885, 3104
Zsp2I ATGCAT 1 cut(s) 1302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.