MD02G1286900.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
34370693 .. 34373690
2998 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1286900.v1.1.491

Sequence Viewer

Length: 2955 bp
ATGGCTTTGATTGGAGAGGCTTTTCTCTCTGCTTCCATCCAGACGCTGTGCGACAAGATTGGTTCCGGCGAGTTGATGGACTTCTTCCGGGGAAAAAAACTTGACCATTCACTCCTGAAGAAACTGAAGCGGACGTTTCTGGCCCTTGATGCAGTGCTTGATGATGCAGAGGAGAAGCAGATGGAGAAACCCCGTGTGGAAAAGTGGCTGGACGAGCTCAAACATGCTGTCTTCGAAGCCGAGGACCTGCTGGACGAGATCGATACTGAAGTTTTGCGAAGCAAGGTGGAAGCTGAATATCAAACGAAGAAAACCCAGGTGTTGAACTTCTTCTCTACTCTTAATCCTTTTTACCAGGGCATGAATGGTAGGATTCAAGAGTTACTTGTAGGACTAGAAAACCTTGCACAACAGAAAGATGTGCTCGGTCTCAGAGAAGGTGTCAAGGGCAAGCTTTCACAAAGAACTCCCACAACTTCCTTCGTTGAGCATGAATTCTCTACTTATGGTAGGGATGAAGATGAAGCGAAGTTGAAAACACTGTTGCTATCTGATGATGCAAGTGTCGGCGATATATCCGTAATCGCCATAGTGGGAATGGGAGGAGTTGGTAAGACAACCCTTGCTCAGCTCCTTTACAACAATGGCATGGTAAAAAAGCATTTCGATGTTCGAGCTTGGGCGTGTGTCTCCGAAGATTTTGATGCTGTTAGGGTCACTAAAACCCTTCTTCAGTCAATTACTTCAAAACACTGTGATACGTCAGATATGGGCTTGCTTCAAGTTGATCTTAGGGAACAAGTAAGGGGGAAAATGTTTCTATTTGTGTTGGATGACCTTTGGAATGACAGTTATAACGATTGGAGTGTTCTACAAGCTCCTTTCACTTATGGGGCGAGGGGAAGTAAGGTCATTGTGACAACAAGGAACGAAGGTGTTGCATCCATCGTGCGCACTGTTCCTATTCACTCTTTAAAACAATTGTCGCATGATGATTGTTGGTTGTTACTTGCAAAACATGCGTTTAGAAATGAAAACACTAGTGCACATCCAGACTTGGAAGAAATTGGTAAAAAAATTGCACGTAAGTGCAATGGTCTGCCTTTAGCTGCAAAAACACTTGGAGGTCTCTTAAGTTGCAACATGGACCACAAGAAATGGAATCATATATTGAATAGCAATCTTTGGGAGCTACCACAAGCAAATAGTATTCTTCCATCTCTAAGATTGAGTTTCCATTACCTCCCTCCTTATTTAAAACAATGTTTCGCTTATTGCTCAATTTTTCCAAAGGACTATGAATTTGATAAGCATACTTTGGTTCGACTTTGGATGGCTGTGGGTTTAATTTCACAAGTTGAGGGCGGGGCAAGAATGGAAGAGGATGGCGAGAACTATTTTAATGAATTAGTATCAAGATCACTAATTCAAAGATCAAGAACTGGATTCACAATTCATGATCTCGTTAATGACTTGGCTATGTTCGTGTCTAGAGAATTTTGTTTTCGGATGGATGAGGAAGGATCACATGAAGTTCCTAAAAGAGTTCGACATTTGTCATATTGGAAAGGAAGATTTGATGCTGCTAAAAAGTTTCAGCCATTAAATGGAGTTAAATATTTGGGCACCTTCTTACCCATGTCTTTAAGGAAGTCAAATTGGGATTATGTAAGTAGTAAGGTTCCAAATGATTTGTTGCCAACACTAAAATGTTTACGGGCACTGTCTTTGGCAGGATATAAAAGTGTCAGTCACTTACCTGATTGCGTCGGGGAGCACATACATTTACGCTACATTGACCTCTCTTACACTGCTATTAAAAGGTTACCAGATAACGTGAGTAGTCTCTACAATTTGCAAACTCTATTGTTGTCTCATTGTTCCTCTCTTGTTGAATTGCCTGTAGACATGAGGAAACTGATTAGTTTGCGCCATCTTGATATTAGAGATACTGGTATAAAAGAGATGCCGGTTCAAATGGGTAGACTAAAAAGTTTGAGAACACTCACTCCTTATGTGTTGGGGACATCTACTAGGTCTGGCGGCATTGGAGAATTGGGGGAGTTACCCAATCTTGGAGGGGAACTTTCTATCTTGAATCTAGAGAATGTAGTCGATGCTATGGATGCCTTGCGGGCCAATTTGAAGGATAAGAAAGATCTCAATCAAATAGAGTTGGCATGGGGTAGGAAGGATGCAGATGATTCCATGAAAGAGAAACATGTATTTGAAAGATTACAACCTTCTGTAAATTTGGTGGAACTGACCATCAGATCTTATGGTGGAACAAGCTTTCCGAATTGGTTGGGAGACTCTTCCTTCTCCAACATAAAAGTCATGCGCCTCAGTGGTTTTAGTAATTGTTGGTCGTTGCCACCAGTTGGGCAGTTGCCTGCTCTTAAGGAGCTCTATATAGACAACATGAAATGTGTTATGAGTATTGGTGCTGAGTTTTATGGTGTCAATGGAACTTGTCTAATTCAGCCATTTCGTTCTTTAGAGAGGCTGGAATTCAGATGGATGCCAGAATGGGAAGAATGGCTGCCAAGTCCAGGTAGAGGTCAATGTCCGGACTTTCCTCGTCTCGAGGAGCTGGTTTTACATAATTGTCCGAAGCTGAGGGGAAACTTGCCCTATCATCTTCCTTGCTTGAAAAAACTTGGAGTGTTCCACTGCGGGGTTCTGCATGAAAGGGCTACTAGAAGTAGATGGATACCCTGGTCTCTCATTGTTAACACGGAATCCTTGCGACAATCTCTTCAGGATCTGCAAATAAGAGGATGCCCTGGTCTCTCGTCGTTACTAGAGACGGAGTCGCTGTCCTCGCTTTTCACACTTGAGATTCCAATTTTTAGTCGCACAGATTGCTTGCAGCCGCACTTGAGCAGTCGTCTTCAAAAATTGACTCTCTGTAATTGCGGGCCCCTCTTGTCGTTCTCAAGAAATGGAGATTAG

Protein Analysis

985

Amino Acids

111.44

Weight (kDa)

7.12

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 12 - 99 9e-17 Rx N-terminal domain
NB-ARC PF00931 190 - 345 5.3e-35 NB-ARC domain
WHD_DRP PF23559 428 - 493 4.9e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 566 - 868 7.7e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 683 - 808 1.6e-36 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 855
Acc16I TGCGCA 1 cut(s) 953
Acc36I ACCTGC 1 cut(s) 255
AccB1I GGYRCC 1 cut(s) 1625
AccB7I CCANNNNNTGG 2 cut(s) 1607, 2381
AccI GTMKAC 2 cut(s) 1905, 1984
AccIII TCCGGA 1 cut(s) 2569
AciI CCGC 7 cut(s) 130, 1365, 2043, 2134, 2676, 2876, 2919
AclWI GGATC 2 cut(s) 1531, 2772
AcsI RAATTY 5 cut(s) 494, 1301, 1496, 2251, 2510
AcuI CTGAAG 5 cut(s) 137, 146, 288, 716, 2744
AfiI CCNNNNNNNGG 6 cut(s) 1607, 2075, 2381, 2552, 2558, 2677
AflII CTTAAG 2 cut(s) 1132, 2399
AflIII ACRYGT 1 cut(s) 2221
AhlI ACTAGT 1 cut(s) 1040
AjnI CCWGG 5 cut(s) 315, 354, 2551, 2717, 2785
AleI CACNNNNGTG 1 cut(s) 1087
AloI GAACNNNNNNTCC 4 cut(s) 1993, 2025, 2278, 2310
Alw21I GWGCWC 5 cut(s) 219, 426, 1048, 1779, 2409
Alw44I GTGCAC 1 cut(s) 1044
AlwI GGATC 2 cut(s) 1531, 2772
AlwNI CAGNNNCTG 2 cut(s) 46, 2767
Ama87I CYCGRG 1 cut(s) 2585
Aor13HI TCCGGA 1 cut(s) 2569
AoxI GGCC 3 cut(s) 141, 2136, 2921
ApaI GGGCCC 1 cut(s) 2925
ApaLI GTGCAC 1 cut(s) 1044
ApeKI GCWGC 4 cut(s) 1109, 1583, 2542, 2872
ApoI RAATTY 5 cut(s) 494, 1301, 1496, 2251, 2510
ArsI GACNNNNNNTTYG 4 cut(s) 213, 245, 1286, 1318
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 3 cut(s) 954, 1932, 2343
AspS9I GGNCC 6 cut(s) 142, 244, 1147, 2136, 2921, 2922
AsuC2I CCSGG 1 cut(s) 89
AsuII TTCGAA 1 cut(s) 234
AvaI CYCGRG 1 cut(s) 2585
AvaII GGWCC 2 cut(s) 244, 1147
BaeGI GKGCMC 4 cut(s) 1048, 1628, 1723, 2925
BaeI ACNNNNGTAYC 4 cut(s) 255, 288, 2705, 2738
BanI GGYRCC 1 cut(s) 1625
BanII GRGCYC 3 cut(s) 219, 2409, 2925
BbsI GAAGAC 2 cut(s) 223, 2885
Bbv12I GWGCWC 5 cut(s) 219, 426, 1048, 1779, 2409
BbvCI CCTCAGC 1 cut(s) 2618
BbvI GCAGC 4 cut(s) 1096, 1570, 2529, 2884
BcgI CGANNNNNNTGC 2 cut(s) 920, 954
BciT130I CCWGG 5 cut(s) 317, 356, 2553, 2719, 2787
BciVI GTATCC 1 cut(s) 2706
BcnI CCSGG 1 cut(s) 89
BcuI ACTAGT 1 cut(s) 1040
BfaI CTAG 7 cut(s) 395, 1041, 1491, 2034, 2102, 2700, 2804
BfmI CTRYAG 1 cut(s) 1902
BfrI CTTAAG 2 cut(s) 1132, 2399
BfuAI ACCTGC 1 cut(s) 255
BfuI GTATCC 1 cut(s) 2706
BglI GCCNNNNNGGC 1 cut(s) 2135
BglII AGATCT 2 cut(s) 2158, 2273
BisI GCNGC 6 cut(s) 1110, 1584, 2044, 2543, 2873, 2876
BlpI GCTNAGC 1 cut(s) 627
BlsI GCNGC 6 cut(s) 1111, 1585, 2045, 2544, 2874, 2877
Bme1390I CCNGG 6 cut(s) 89, 317, 356, 2553, 2719, 2787
Bme18I GGWCC 2 cut(s) 244, 1147
BmeT110I CYCGRG 1 cut(s) 2585
BmgT120I GGNCC 6 cut(s) 142, 244, 1147, 2136, 2921, 2922
BmiI GGNNCC 5 cut(s) 64, 1627, 1683, 2923, 2924
BmrFI CCNGG 6 cut(s) 89, 317, 356, 2553, 2719, 2787
BoxI GACNNNNGTC 1 cut(s) 1555
BpiI GAAGAC 2 cut(s) 223, 2885
Bpu10I CCTNAGC 1 cut(s) 2618
Bpu1102I GCTNAGC 1 cut(s) 627
Bpu14I TTCGAA 1 cut(s) 234
BpuEI CTTGAG 3 cut(s) 2858, 2902, 2923
BpuMI CCSGG 1 cut(s) 89
Bsa29I ATCGAT 1 cut(s) 261
BsaAI YACGTR 1 cut(s) 1085
BsaBI GATNNNNATC 1 cut(s) 2163
BsaI GGTCTC 4 cut(s) 434, 1133, 2727, 2795
BsaJI CCNNGG 6 cut(s) 88, 240, 315, 355, 2717, 2785
BsaWI WCCGGW 1 cut(s) 2569
BsaXI ACNNNNNCTCC 4 cut(s) 1993, 2023, 2804, 2834
Bsc4I CCNNNNNNNGG 6 cut(s) 1607, 2075, 2381, 2552, 2558, 2677
Bse118I RCCGGY 1 cut(s) 1969
Bse1I ACTGG 3 cut(s) 1447, 1957, 2378
Bse3DI GCAATG 1 cut(s) 1099
Bse8I GATNNNNATC 1 cut(s) 2163
BseAI TCCGGA 1 cut(s) 2569
BseBI CCWGG 5 cut(s) 317, 356, 2553, 2719, 2787
BseCI ATCGAT 1 cut(s) 261
BseDI CCNNGG 6 cut(s) 88, 240, 315, 355, 2717, 2785
BseJI GATNNNNATC 1 cut(s) 2163
BseLI CCNNNNNNNGG 6 cut(s) 1607, 2075, 2381, 2552, 2558, 2677
BseMI GCAATG 1 cut(s) 1099
BseMII CTCAG 5 cut(s) 445, 641, 2359, 2439, 2609
BseNI ACTGG 3 cut(s) 1447, 1957, 2378
BseRI GAGGAG 3 cut(s) 185, 618, 2603
BseSI GKGCMC 4 cut(s) 1048, 1628, 1723, 2925
BseXI GCAGC 4 cut(s) 1096, 1570, 2529, 2884
BshFI GGCC 3 cut(s) 143, 2138, 2923
BshNI GGYRCC 1 cut(s) 1625
BshVI ATCGAT 1 cut(s) 261
BsiHKAI GWGCWC 5 cut(s) 219, 426, 1048, 1779, 2409
BsiHKCI CYCGRG 1 cut(s) 2585
BsiSI CCGG 4 cut(s) 66, 88, 1970, 2570
BslFI GGGAC 1 cut(s) 2038
BslI CCNNNNNNNGG 6 cut(s) 1607, 2075, 2381, 2552, 2558, 2677
BsmBI CGTCTC 2 cut(s) 2588, 2801
BsmFI GGGAC 1 cut(s) 2038
BsnI GGCC 3 cut(s) 143, 2138, 2923
Bso31I GGTCTC 4 cut(s) 434, 1133, 2727, 2795
BsoBI CYCGRG 1 cut(s) 2585
Bsp119I TTCGAA 1 cut(s) 234
Bsp120I GGGCCC 1 cut(s) 2921
Bsp1286I GDGCHC 8 cut(s) 219, 426, 1048, 1628, 1723, 1779, 2409, 2925
Bsp13I TCCGGA 1 cut(s) 2569
Bsp143I GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
Bsp1720I GCTNAGC 1 cut(s) 627
BspACI CCGC 7 cut(s) 130, 1365, 2043, 2134, 2676, 2876, 2919
BspANI GGCC 3 cut(s) 143, 2138, 2923
BspCNI CTCAG 5 cut(s) 444, 640, 2358, 2440, 2610
BspDI ATCGAT 1 cut(s) 261
BspEI TCCGGA 1 cut(s) 2569
BspHI TCATGA 1 cut(s) 1456
BspLI GGNNCC 5 cut(s) 64, 1627, 1683, 2923, 2924
BspMI ACCTGC 1 cut(s) 255
BspPI GGATC 2 cut(s) 1531, 2772
BspT104I TTCGAA 1 cut(s) 234
BspT107I GGYRCC 1 cut(s) 1625
BspTI CTTAAG 2 cut(s) 1132, 2399
BspTNI GGTCTC 4 cut(s) 434, 1133, 2727, 2795
BsrDI GCAATG 1 cut(s) 1099
BsrFI RCCGGY 1 cut(s) 1969
BsrI ACTGG 3 cut(s) 1447, 1957, 2378
BssAI RCCGGY 1 cut(s) 1969
BssECI CCNNGG 6 cut(s) 88, 240, 315, 355, 2717, 2785
BssMI GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
Bst2UI CCWGG 5 cut(s) 317, 356, 2553, 2719, 2787
Bst4CI ACNGT 5 cut(s) 543, 755, 851, 958, 1725
Bst6I CTCTTC 3 cut(s) 1374, 2320, 2763
BstAFI CTTAAG 2 cut(s) 1132, 2399
BstAPI GCANNNNNTGC 2 cut(s) 1019, 2865
BstBAI YACGTR 1 cut(s) 1085
BstBI TTCGAA 1 cut(s) 234
BstC8I GCNNGC 6 cut(s) 452, 776, 2136, 2394, 2870, 2921
BstDEI CTNAG 7 cut(s) 431, 627, 791, 1223, 2345, 2448, 2618
BstEII GGTNACC 1 cut(s) 1824
BstHHI GCGC 3 cut(s) 954, 1932, 2343
BstKTI GATC 9 cut(s) 261, 790, 1421, 1436, 1462, 1526, 2161, 2276, 2767
BstMBI GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
BstMWI GCNNNNNNNGC 7 cut(s) 149, 214, 1019, 2126, 2135, 2824, 2865
BstNI CCWGG 5 cut(s) 317, 356, 2553, 2719, 2787
BstNSI RCATGY 3 cut(s) 227, 1022, 2225
BstPAI GACNNNNGTC 1 cut(s) 1555
BstPI GGTNACC 1 cut(s) 1824
BstSCI CCNGG 6 cut(s) 87, 315, 354, 2551, 2717, 2785
BstSFI CTRYAG 1 cut(s) 1902
BstSLI GKGCMC 4 cut(s) 1048, 1628, 1723, 2925
BstV1I GCAGC 4 cut(s) 1096, 1570, 2529, 2884
BstV2I GAAGAC 2 cut(s) 223, 2885
BstX2I RGATCY 3 cut(s) 2158, 2273, 2764
BstYI RGATCY 3 cut(s) 2158, 2273, 2764
Bsu15I ATCGAT 1 cut(s) 261
BsuI GTATCC 1 cut(s) 2706
BsuRI GGCC 3 cut(s) 143, 2138, 2923
BsuTUI ATCGAT 1 cut(s) 261
BtsI GCAGTG 3 cut(s) 159, 1809, 2671
BtsIMutI CAGTG 8 cut(s) 159, 539, 751, 954, 1721, 1809, 2353, 2671
BveI ACCTGC 1 cut(s) 255
Cac8I GCNNGC 6 cut(s) 452, 776, 2136, 2394, 2870, 2921
CaiI CAGNNNCTG 2 cut(s) 46, 2767
CciI TCATGA 1 cut(s) 1456
CfoI GCGC 3 cut(s) 954, 1932, 2343
Cfr10I RCCGGY 1 cut(s) 1969
Cfr13I GGNCC 6 cut(s) 142, 244, 1147, 2136, 2921, 2922
ClaI ATCGAT 1 cut(s) 261
CseI GACGC 2 cut(s) 52, 1756
DdeI CTNAG 7 cut(s) 431, 627, 791, 1223, 2345, 2448, 2618
DpnI GATC 9 cut(s) 260, 789, 1420, 1435, 1461, 1525, 2160, 2275, 2766
DpnII GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
DraI TTTAAA 2 cut(s) 975, 1257
Eam1104I CTCTTC 3 cut(s) 1374, 2320, 2763
EarI CTCTTC 3 cut(s) 1374, 2320, 2763
Ecl136II GAGCTC 2 cut(s) 217, 2407
Eco24I GRGCYC 3 cut(s) 219, 2409, 2925
Eco31I GGTCTC 4 cut(s) 434, 1133, 2727, 2795
Eco47I GGWCC 2 cut(s) 244, 1147
Eco53kI GAGCTC 2 cut(s) 217, 2407
Eco57I CTGAAG 5 cut(s) 137, 146, 288, 716, 2744
Eco88I CYCGRG 1 cut(s) 2585
Eco91I GGTNACC 1 cut(s) 1824
EcoICRI GAGCTC 2 cut(s) 217, 2407
EcoO109I RGGNCCY 2 cut(s) 244, 2922
EcoO65I GGTNACC 1 cut(s) 1824
EcoRI GAATTC 2 cut(s) 494, 2510
EcoRII CCWGG 5 cut(s) 315, 354, 2551, 2717, 2785
EcoT38I GRGCYC 3 cut(s) 219, 2409, 2925
Esp3I CGTCTC 2 cut(s) 2588, 2801
FalI AAGNNNNNCTT 4 cut(s) 369, 401, 774, 806
FaqI GGGAC 1 cut(s) 2038
FauI CCCGC 4 cut(s) 1358, 2127, 2669, 2912
FblI GTMKAC 2 cut(s) 1905, 1984
Fnu4HI GCNGC 6 cut(s) 1110, 1584, 2044, 2543, 2873, 2876
FriOI GRGCYC 3 cut(s) 219, 2409, 2925
Fsp4HI GCNGC 6 cut(s) 1110, 1584, 2044, 2543, 2873, 2876
FspAI RTGCGCAY 1 cut(s) 953
FspBI CTAG 7 cut(s) 395, 1041, 1491, 2034, 2102, 2700, 2804
FspI TGCGCA 1 cut(s) 953
GlaI GCGC 3 cut(s) 953, 1931, 2342
GluI GCNGC 6 cut(s) 1110, 1584, 2044, 2543, 2873, 2876
HaeIII GGCC 3 cut(s) 143, 2138, 2923
HapII CCGG 4 cut(s) 66, 88, 1970, 2570
HgaI GACGC 2 cut(s) 52, 1756
HhaI GCGC 3 cut(s) 954, 1932, 2343
Hin6I GCGC 3 cut(s) 952, 1930, 2341
HinP1I GCGC 3 cut(s) 952, 1930, 2341
HincII GTYRAC 1 cut(s) 2734
HindII GTYRAC 1 cut(s) 2734
HindIII AAGCTT 2 cut(s) 452, 2290
HpaI GTTAAC 1 cut(s) 2734
HpaII CCGG 4 cut(s) 66, 88, 1970, 2570
Hpy166II GTNNAC 5 cut(s) 1046, 1715, 1906, 1985, 2734
Hpy188I TCNGA 9 cut(s) 434, 553, 694, 766, 1509, 2273, 2298, 2516, 2613
Hpy8I GTNNAC 5 cut(s) 1046, 1715, 1906, 1985, 2734
Hpy99I CGWCG 2 cut(s) 1772, 2800
HpyCH4III ACNGT 5 cut(s) 543, 755, 851, 958, 1725
HpyCH4IV ACGT 4 cut(s) 134, 761, 1084, 1836
HpyF10VI GCNNNNNNNGC 7 cut(s) 149, 214, 1019, 2126, 2135, 2824, 2865
HpyF3I CTNAG 7 cut(s) 431, 627, 791, 1223, 2345, 2448, 2618
HpySE526I ACGT 4 cut(s) 134, 761, 1084, 1836
HspAI GCGC 3 cut(s) 952, 1930, 2341
Kpn2I TCCGGA 1 cut(s) 2569
KspAI GTTAAC 1 cut(s) 2734
Kzo9I GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
LmnI GCTCC 6 cut(s) 636, 883, 1189, 1774, 2404, 2590
Lsp1109I GCAGC 4 cut(s) 1096, 1570, 2529, 2884
MaeI CTAG 7 cut(s) 395, 1041, 1491, 2034, 2102, 2700, 2804
MaeII ACGT 4 cut(s) 134, 761, 1084, 1836
MaeIII GTNAC 8 cut(s) 381, 715, 916, 1005, 1751, 1824, 2064, 2799
MalI GATC 9 cut(s) 260, 789, 1420, 1435, 1461, 1525, 2160, 2275, 2766
MboI GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
MfeI CAATTG 1 cut(s) 980
MflI RGATCY 3 cut(s) 2158, 2273, 2764
MhlI GDGCHC 8 cut(s) 219, 426, 1048, 1628, 1723, 1779, 2409, 2925
MlyI GAGTC 3 cut(s) 2306, 2822, 2899
MmeI TCCRAC 2 cut(s) 810, 2349
MroI TCCGGA 1 cut(s) 2569
MroXI GAANNNNTTC 1 cut(s) 329
MslI CAYNNNNRTG 3 cut(s) 666, 1087, 1708
MspCI CTTAAG 2 cut(s) 1132, 2399
MspI CCGG 4 cut(s) 66, 88, 1970, 2570
MspR9I CCNGG 6 cut(s) 89, 317, 356, 2553, 2719, 2787
MunI CAATTG 1 cut(s) 980
MvaI CCWGG 5 cut(s) 317, 356, 2553, 2719, 2787
MwoI GCNNNNNNNGC 7 cut(s) 149, 214, 1019, 2126, 2135, 2824, 2865
NciI CCSGG 1 cut(s) 89
NdeII GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
NlaIV GGNNCC 5 cut(s) 64, 1627, 1683, 2923, 2924
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 3 cut(s) 715, 916, 1751
NsbI TGCGCA 1 cut(s) 953
NspI RCATGY 3 cut(s) 227, 1022, 2225
NspV TTCGAA 1 cut(s) 234
OliI CACNNNNGTG 1 cut(s) 1087
PaeR7I CTCGAG 1 cut(s) 2585
PagI TCATGA 1 cut(s) 1456
PciI ACATGT 1 cut(s) 2221
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 7 cut(s) 373, 1162, 1446, 2098, 2204, 2741, 2842
PflFI GACNNNGTC 1 cut(s) 2812
PflMI CCANNNNNTGG 2 cut(s) 1607, 2381
PkrI GCNGC 6 cut(s) 1111, 1585, 2045, 2544, 2874, 2877
PleI GAGTC 3 cut(s) 2306, 2821, 2899
PpsI GAGTC 3 cut(s) 2306, 2821, 2899
Ppu21I YACGTR 1 cut(s) 1085
PpuMI RGGWCCY 1 cut(s) 244
PscI ACATGT 1 cut(s) 2221
PshAI GACNNNNGTC 1 cut(s) 1555
PsiI TTATAA 1 cut(s) 855
Psp124BI GAGCTC 2 cut(s) 219, 2409
Psp5II RGGWCCY 1 cut(s) 244
Psp6I CCWGG 5 cut(s) 315, 354, 2551, 2717, 2785
PspEI GGTNACC 1 cut(s) 1824
PspGI CCWGG 5 cut(s) 315, 354, 2551, 2717, 2785
PspN4I GGNNCC 5 cut(s) 64, 1627, 1683, 2923, 2924
PspOMI GGGCCC 1 cut(s) 2921
PspPI GGNCC 6 cut(s) 142, 244, 1147, 2136, 2921, 2922
PspPPI RGGWCCY 1 cut(s) 244
PstNI CAGNNNCTG 2 cut(s) 46, 2767
PsuI RGATCY 3 cut(s) 2158, 2273, 2764
PsyI GACNNNGTC 1 cut(s) 2812
RseI CAYNNNNRTG 3 cut(s) 666, 1087, 1708
SacI GAGCTC 2 cut(s) 219, 2409
SatI GCNGC 6 cut(s) 1110, 1584, 2044, 2543, 2873, 2876
Sau3AI GATC 9 cut(s) 258, 787, 1418, 1433, 1459, 1523, 2158, 2273, 2764
Sau96I GGNCC 6 cut(s) 142, 244, 1147, 2136, 2921, 2922
SchI GAGTC 3 cut(s) 2306, 2822, 2899
ScrFI CCNGG 6 cut(s) 89, 317, 356, 2553, 2719, 2787
SduI GDGCHC 8 cut(s) 219, 426, 1048, 1628, 1723, 1779, 2409, 2925
SfcI CTRYAG 1 cut(s) 1902
Sfr274I CTCGAG 1 cut(s) 2585
SfuI TTCGAA 1 cut(s) 234
SinI GGWCC 2 cut(s) 244, 1147
SlaI CTCGAG 1 cut(s) 2585
SmiMI CAYNNNNRTG 3 cut(s) 666, 1087, 1708
SmlI CTYRAG 6 cut(s) 1132, 2399, 2585, 2837, 2881, 2938
SmoI CTYRAG 6 cut(s) 1132, 2399, 2585, 2837, 2881, 2938
SpeI ACTAGT 1 cut(s) 1040
SsiI CCGC 7 cut(s) 130, 1365, 2043, 2134, 2676, 2876, 2919
SspI AATATT 1 cut(s) 1619
SspMI CTAG 7 cut(s) 395, 1041, 1491, 2034, 2102, 2700, 2804
SstI GAGCTC 2 cut(s) 219, 2409
StyD4I CCNGG 6 cut(s) 87, 315, 354, 2551, 2717, 2785
TaaI ACNGT 5 cut(s) 543, 755, 851, 958, 1725
TaiI ACGT 4 cut(s) 137, 764, 1087, 1839
TaqI TCGA 8 cut(s) 234, 261, 666, 673, 1324, 1549, 2115, 2586
TaqII GACCGA 1 cut(s) 416
TauI GCSGC 2 cut(s) 2046, 2878
TfiI GAWTC 7 cut(s) 373, 1162, 1446, 2098, 2204, 2741, 2842
TscAI CASTG 8 cut(s) 159, 546, 758, 961, 1728, 1816, 2353, 2678
TseFI GTSAC 3 cut(s) 715, 916, 1751
TseI GCWGC 4 cut(s) 1109, 1583, 2542, 2872
Tsp45I GTSAC 3 cut(s) 715, 916, 1751
TspGWI ACGGA 3 cut(s) 568, 2753, 2825
TspRI CASTG 8 cut(s) 159, 546, 758, 961, 1728, 1816, 2353, 2678
Tth111I GACNNNGTC 1 cut(s) 2812
Van91I CCANNNNNTGG 2 cut(s) 1607, 2381
Vha464I CTTAAG 2 cut(s) 1132, 2399
VneI GTGCAC 1 cut(s) 1044
VpaK11BI GGWCC 2 cut(s) 244, 1147
XapI RAATTY 5 cut(s) 494, 1301, 1496, 2251, 2510
XbaI TCTAGA 2 cut(s) 1490, 2101
XceI RCATGY 3 cut(s) 227, 1022, 2225
XcmI CCANNNNNNNNNTGG 2 cut(s) 362, 595
XhoI CTCGAG 1 cut(s) 2585
XmiI GTMKAC 2 cut(s) 1905, 1984
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 7 cut(s) 395, 1041, 1491, 2034, 2102, 2700, 2804
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.