Rmu_sc0002662.1_g000009

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002662.1
Physical Location & Seq
Forward (+)
34602 .. 38381
3780 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002662.1_g000009.1.cds

Sequence Viewer

Length: 3780 bp
atggctggcgtggtgggtggagctttcctctctgcttcccttcaggtcttgttcgatagattggcttctcgtcaagtcgttgacttcatccgcggcaacaagctcaacgctggacttctcagaaagctagaaatcactctgctttctgtcaattccgtgctcagtgatgccgaggacaagcagataaccaatcatgctgtgaaagaatggcttgatgagcttagagctgctgtctatgatgccgaggacctcatggctgacttcagctctgaagctttggagaaagagcttcaagaggaatctgaatccggaagcagcggcggaattcaggtaaaagatgtcaaattgtatttaatgaatgcattggatgaatggttggagcccaagatagaggaagttgttgaaagactagaatttattgctaagaagaagtatgttcttggattgaaagagggtattaaagatgtagcagcaagaagattgcctgcaacttctttggtggaggagtctagtgtgtatggtagggatgaggacagagaggtcattgtgaggttgttgctttcagatggtatggacgtttgtggcaataagatttgtgtgattcccatagtgggtatgggtggaattggcaagaccacccttgctcagctcgtgtacaatgatgatgaagtgaagggatactttgacctcaaggcatgggtgtgtgtttcggaagaatttgatgtgttgaggataactaaaacaattttcgagacaatcacttcggcgccttgtggtatcactgatctgaatttgcttcaagttaaattgaaagatgaactgatggctaagaagtttctgcttgttctagatgatgtttggaatgagaactacattgattgggacgacttgaagaaacctttcttgtctgggattcatgggagtaagattgttgtgacaactcgcagcgaaaatgttgcattgatcatgggcactgttccatctcatcgtctgagacaattgagtgatgaagattgttggctgttgtttgcaacgcatgcctttaacaatgtagagtcaagagaacaaccagtcctagaagaaatggggagggaaattgtcaaaaagtgcaaagggcttgcattagctgcaaaaatgcttgggggtctcctgcgatcaagactagatcctgatgattggcataagatacttactagtgagatttgggattcgtcagaagaaactcataacattctgccagctctaaggttgagttatgaccatctcccatcacatttgaagcagtgtttttcttattgttcaatattccccaaagactatgagtttggaaggaacgaattggtcctgttgtggatggctgcagatcttttagaacaacccaaaagaaagaagaggatggaagaagtgggagaagagtatttccatgatctaatatcaaggtcgctttttcagcaatctagtacaaatcaatcactttttgtcatgcatgaccttgttaatgatttggctaaatatgtctctggagaattttgtcttcggttggaggatggtgtctcagataaactggtaagaaggactcgtcatttgtcattttctagaactgcacatgatgactttaagaaatttaagatgttgtatgaagctaagtgcgtacgcactttcctaccactcaaatttcaagcaccgtatggacgctttcatttgtctaacaaggtaacccatgatcttttaccaaggctacgctgcttgcgagttctctctctatcgcagtacaaactcagcgagttgcctgaatcagtgggaaatttgaagcatctgcggcatttggatctctctcacactgcaattcagaggttacctgagagcgtaagtaccttataccaattgaaaacactgacactgtcatgctgtttctctcttactgagttgccaacaaacatgggaagactagtcaacttgcgtcatctggacattagtcataccaagttaaaagagatgccattacagatgagtaaaatgaagaacctacagacattaactgattttgttcttggcaaatatagtggatgcaacatcaaggagttgaaagagctccagcaacttcgtggaacactatctatttcaggactacaaaatgtaacccatgatgtgtatgctgtggaggcgaatatgaaggctaagaagtaccttgatgagctagtcttgaaatgggctggtcatgctgatgattcacagtatgaaaggaatgtccttgaatgtctcaaacctcatgtgagcttgaaagaactcaaaattgaatattttgggggtactagatttccggattggctaggagaccattccttctgcaatatggtgtctttatgtcttaaagactgtaaagattgctgcttcttgccaccacttgggcagttaccatctcttaaaaagctttgtatctctgggttggacggggtagggaaggttggtgctgagttttatggtgattgtgcggtaaataagccgtttaaatccctagaaattttgaagttagaagatatgtttgagtggcaggagtggtactgttttggaggtgacaatgttggtggtgctttcccttgccttcaggagctttatctacaacgttgtcccaaactaacaggagggttacccgactatcttccatctctgacaacactatggattttcaaatgccagcagctggtggcctcccttccaagggctccatctatccgtgatttgaagtttggatattgtgatgggttgcagttaaaagaattgccttctgaactgcactggctcagaattgaaggatgccatgtcctggagtctatacctggtcatgtgaaggaaacaaatccttgtcttcaggagttatttatctctgactgttcttctctagtgtcctttcctaaggatggattacctgctacactgaaagccattgaaattgagaactgtgggaggttagagatacctgttgaccactactatgcttcccttgaaagcttggccatatggagtagttgcgattctttagagtcctttccattggaactgttcccaaacttgaacaatctcaaaattcggagctgcaaaggtctaaaatcactttctttttcaggtgaaccagaccatgagctcttggctctgagtttcttggaaatctgggattgtcctagtttggtttcattccctgatagagggttgccaacacccaacctgacccagtttaaggtaacagattgtatgaatttgaggtcgcttcctgaactgatggacaaacttctatctcttcagtacttagaaatatctggatgtccagaacttgagttgtttcctgatgggggtttgccctccaatttgagttcactctacatttgggattgcaacaaacttgtcacacagagagtgcaatggaagctgaaaaatcttgtttctctcagatgtttgagtatcatgggtggaaagcgggctgatgtgcagtgctttccagaaaaggggctgctgcctacctctcttacctctctctccatctgtggacttccaaatctaacatcacttgataaagggcttcaacaactcacagctcttgaaaaattggaaatcagccactgtcgtaagctccagtgcttacctgaagaggggctgacacctctttcatatctttgcatccgcaaatgtcctttgttaaaacaaagctgccagagggatagagaagattggtccaagatagcacatatcccctgcattgagattgataatgacatgattttatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1259

Amino Acids

142.58

Weight (kDa)

5.78

Isoelectric Point (pI)

45.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 539
Acc36I ACCTGC 1 cut(s) 2935
AccB1I GGYRCC 1 cut(s) 766
AccB7I CCANNNNNTGG 3 cut(s) 2405, 2701, 2824
AccII CGCG 1 cut(s) 93
AccIII TCCGGA 2 cut(s) 308, 2320
AciI CCGC 8 cut(s) 91, 93, 318, 321, 1819, 2492, 3472, 3676
AclI AACGTT 1 cut(s) 2623
AclWI GGATC 2 cut(s) 1160, 1836
AcoI YGGCCR 1 cut(s) 3012
AcuI CTGAAG 7 cut(s) 26, 247, 291, 2588, 2852, 3281, 3660
AcyI GRCGYC 1 cut(s) 767
AfaI GTAC 9 cut(s) 656, 1462, 1653, 1772, 1873, 2186, 2311, 2561, 3302
AhlI ACTAGT 2 cut(s) 1193, 1948
AjnI CCWGG 2 cut(s) 2823, 2836
AloI GAACNNNNNNTCC 2 cut(s) 1056, 1088
Alw21I GWGCWC 3 cut(s) 162, 2094, 3144
Alw26I GTCTC 7 cut(s) 746, 988, 1151, 1522, 1558, 2264, 2328
AlwI GGATC 2 cut(s) 1160, 1836
AlwNI CAGNNNCTG 2 cut(s) 2701, 3615
Aor13HI TCCGGA 2 cut(s) 308, 2320
AoxI GGCC 2 cut(s) 2706, 3012
ArsI GACNNNNNNTTYG 6 cut(s) 745, 777, 1307, 1339, 1567, 1599
Asp700I GAANNNNTTC 1 cut(s) 899
AspLEI GCGC 1 cut(s) 769
AspS9I GGNCC 3 cut(s) 247, 1342, 3726
AsuHPI GGTGA 3 cut(s) 2495, 2585, 3137
AvaII GGWCC 3 cut(s) 247, 1342, 3726
AxyI CCTNAGG 1 cut(s) 2913
BaeGI GKGCMC 1 cut(s) 974
BalI TGGCCA 1 cut(s) 3014
BanI GGYRCC 1 cut(s) 766
BanII GRGCYC 4 cut(s) 384, 2094, 2725, 3144
BauI CACGAG 1 cut(s) 650
BbsI GAAGAC 3 cut(s) 1526, 1951, 2858
Bbv12I GWGCWC 3 cut(s) 162, 2094, 3144
BceAI ACGGC 1 cut(s) 2488
BcgI CGANNNNNNTGC 2 cut(s) 938, 972
BciT130I CCWGG 2 cut(s) 2825, 2838
BciVI GTATCC 1 cut(s) 671
BclI TGATCA 1 cut(s) 963
BcoDI GTCTC 7 cut(s) 746, 988, 1151, 1522, 1558, 2264, 2328
BcuI ACTAGT 2 cut(s) 1193, 1948
BfmI CTRYAG 2 cut(s) 1359, 2027
BfoI RGCGCY 1 cut(s) 770
BfuAI ACCTGC 1 cut(s) 2935
BfuI GTATCC 1 cut(s) 671
BglII AGATCT 1 cut(s) 1363
BlpI GCTNAGC 1 cut(s) 645
BmcAI AGTACT 1 cut(s) 3302
Bme1390I CCNGG 2 cut(s) 2825, 2838
Bme18I GGWCC 3 cut(s) 247, 1342, 3726
BmgT120I GGNCC 3 cut(s) 247, 1342, 3726
BmiI GGNNCC 3 cut(s) 381, 768, 2724
BmrFI CCNGG 2 cut(s) 2825, 2838
BmrI ACTGGG 1 cut(s) 3223
BmsI GCATC 7 cut(s) 157, 229, 1822, 1986, 2057, 2804, 3681
BmuI ACTGGG 1 cut(s) 3223
BoxI GACNNNNGTC 1 cut(s) 1974
BpiI GAAGAC 3 cut(s) 1526, 1951, 2858
BplI GAGNNNNNCTC 2 cut(s) 12, 44
BpmI CTGGAG 4 cut(s) 1542, 2078, 2846, 3611
Bpu1102I GCTNAGC 1 cut(s) 645
BpuEI CTTGAG 2 cut(s) 674, 3350
BsaHI GRCGYC 1 cut(s) 767
BsaI GGTCTC 2 cut(s) 1151, 2328
BsaJI CCNNGG 5 cut(s) 91, 171, 243, 1733, 2717
BsaWI WCCGGW 2 cut(s) 308, 2320
Bse1I ACTGG 5 cut(s) 1070, 1569, 2801, 3229, 3628
Bse21I CCTNAGG 1 cut(s) 2913
Bse3DI GCAATG 1 cut(s) 3422
BseAI TCCGGA 2 cut(s) 308, 2320
BseBI CCWGG 2 cut(s) 2825, 2838
BseDI CCNNGG 5 cut(s) 91, 171, 243, 1733, 2717
BseMI GCAATG 1 cut(s) 3422
BseNI ACTGG 5 cut(s) 1070, 1569, 2801, 3229, 3628
BseRI GAGGAG 1 cut(s) 518
BseSI GKGCMC 1 cut(s) 974
BsgI GTGCAG 3 cut(s) 1587, 2777, 3503
Bsh1236I CGCG 1 cut(s) 93
BshFI GGCC 2 cut(s) 2708, 3014
BshNI GGYRCC 1 cut(s) 766
BsiHKAI GWGCWC 3 cut(s) 162, 2094, 3144
BsiSI CCGG 2 cut(s) 309, 2321
BsiWI CGTACG 1 cut(s) 1651
BslFI GGGAC 2 cut(s) 896, 2613
BsmAI GTCTC 7 cut(s) 746, 988, 1151, 1522, 1558, 2264, 2328
BsmFI GGGAC 2 cut(s) 896, 2613
BsmI GAATGC 1 cut(s) 364
BsnI GGCC 2 cut(s) 2708, 3014
Bso31I GGTCTC 2 cut(s) 1151, 2328
Bsp1286I GDGCHC 6 cut(s) 162, 384, 974, 2094, 2725, 3144
Bsp13I TCCGGA 2 cut(s) 308, 2320
Bsp1407I TGTACA 1 cut(s) 654
Bsp143I GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
Bsp1720I GCTNAGC 1 cut(s) 645
BspACI CCGC 8 cut(s) 91, 93, 318, 321, 1819, 2492, 3472, 3676
BspANI GGCC 2 cut(s) 2708, 3014
BspEI TCCGGA 2 cut(s) 308, 2320
BspFNI CGCG 1 cut(s) 93
BspLI GGNNCC 3 cut(s) 381, 768, 2724
BspMAI CTGCAG 1 cut(s) 1363
BspMI ACCTGC 1 cut(s) 2935
BspPI GGATC 2 cut(s) 1160, 1836
BspT107I GGYRCC 1 cut(s) 766
BspTNI GGTCTC 2 cut(s) 1151, 2328
BsrDI GCAATG 1 cut(s) 3422
BsrGI TGTACA 1 cut(s) 654
BsrI ACTGG 5 cut(s) 1070, 1569, 2801, 3229, 3628
BssECI CCNNGG 5 cut(s) 91, 171, 243, 1733, 2717
BssMI GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
BssNI GRCGYC 1 cut(s) 767
BssSI CACGAG 1 cut(s) 650
BssT1I CCWWGG 2 cut(s) 1733, 2717
Bst2BI CACGAG 1 cut(s) 650
Bst2UI CCWGG 2 cut(s) 2825, 2838
Bst6I CTCTTC 4 cut(s) 1385, 1407, 3300, 3636
BstACI GRCGYC 1 cut(s) 767
BstAPI GCANNNNNTGC 2 cut(s) 1037, 1127
BstAUI TGTACA 1 cut(s) 654
BstC8I GCNNGC 8 cut(s) 7, 486, 1038, 1119, 1239, 1748, 2696, 3474
BstDSI CCRYGG 1 cut(s) 91
BstEII GGTNACC 3 cut(s) 1714, 1854, 2646
BstENI CCTNNNNNAGG 1 cut(s) 3201
BstFNI CGCG 1 cut(s) 93
BstH2I RGCGCY 1 cut(s) 770
BstHHI GCGC 1 cut(s) 769
BstKTI GATC 8 cut(s) 787, 966, 1157, 1168, 1366, 1429, 1726, 1831
BstMAI GTCTC 7 cut(s) 746, 988, 1151, 1522, 1558, 2264, 2328
BstMBI GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
BstMWI GCNNNNNNNGC 8 cut(s) 217, 1037, 1127, 1450, 1819, 2162, 2219, 3421
BstNI CCWGG 2 cut(s) 2825, 2838
BstNSI RCATGY 1 cut(s) 1040
BstPAI GACNNNNGTC 1 cut(s) 1974
BstPI GGTNACC 3 cut(s) 1714, 1854, 2646
BstSCI CCNGG 2 cut(s) 2823, 2836
BstSFI CTRYAG 2 cut(s) 1359, 2027
BstSLI GKGCMC 1 cut(s) 974
BstUI CGCG 1 cut(s) 93
BstV2I GAAGAC 3 cut(s) 1526, 1951, 2858
BstX2I RGATCY 3 cut(s) 1165, 1363, 1828
BstYI RGATCY 3 cut(s) 1165, 1363, 1828
Bsu36I CCTNAGG 1 cut(s) 2913
BsuI GTATCC 1 cut(s) 671
BsuRI GGCC 2 cut(s) 2708, 3014
BtgI CCRYGG 1 cut(s) 91
BtsI GCAGTG 3 cut(s) 1289, 1839, 3491
BveI ACCTGC 1 cut(s) 2935
Cac8I GCNNGC 8 cut(s) 7, 486, 1038, 1119, 1239, 1748, 2696, 3474
CaiI CAGNNNCTG 2 cut(s) 2701, 3615
CfoI GCGC 1 cut(s) 769
Cfr13I GGNCC 3 cut(s) 247, 1342, 3726
Cfr42I CCGCGG 1 cut(s) 94
CseI GACGC 2 cut(s) 1701, 1949
CsiI ACCWGGT 1 cut(s) 2836
Csp6I GTAC 9 cut(s) 655, 1461, 1652, 1771, 1872, 2185, 2310, 2560, 3301
CspCI CAANNNNNGTGG 4 cut(s) 2044, 2079, 2566, 2601
CviQI GTAC 9 cut(s) 655, 1461, 1652, 1771, 1872, 2185, 2310, 2560, 3301
DinI GGCGCC 1 cut(s) 768
DpnI GATC 8 cut(s) 786, 965, 1156, 1167, 1365, 1428, 1725, 1830
DpnII GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
DraI TTTAAA 1 cut(s) 2509
DrdI GACNNNNNNGTC 1 cut(s) 539
DseDI GACNNNNNNGTC 1 cut(s) 539
EaeI YGGCCR 1 cut(s) 3012
Eam1104I CTCTTC 4 cut(s) 1385, 1407, 3300, 3636
EarI CTCTTC 4 cut(s) 1385, 1407, 3300, 3636
EciI GGCGGA 1 cut(s) 336
Ecl136II GAGCTC 2 cut(s) 2092, 3142
Eco130I CCWWGG 2 cut(s) 1733, 2717
Eco24I GRGCYC 4 cut(s) 384, 2094, 2725, 3144
Eco31I GGTCTC 2 cut(s) 1151, 2328
Eco47I GGWCC 3 cut(s) 247, 1342, 3726
Eco53kI GAGCTC 2 cut(s) 2092, 3142
Eco57I CTGAAG 7 cut(s) 26, 247, 291, 2588, 2852, 3281, 3660
Eco81I CCTNAGG 1 cut(s) 2913
Eco91I GGTNACC 3 cut(s) 1714, 1854, 2646
EcoICRI GAGCTC 2 cut(s) 2092, 3142
EcoNI CCTNNNNNAGG 1 cut(s) 3201
EcoO109I RGGNCCY 1 cut(s) 247
EcoO65I GGTNACC 3 cut(s) 1714, 1854, 2646
EcoRI GAATTC 1 cut(s) 324
EcoRII CCWGG 2 cut(s) 2823, 2836
EcoT14I CCWWGG 2 cut(s) 1733, 2717
EcoT22I ATGCAT 2 cut(s) 364, 1488
EcoT38I GRGCYC 4 cut(s) 384, 2094, 2725, 3144
EgeI GGCGCC 1 cut(s) 768
EheI GGCGCC 1 cut(s) 768
ErhI CCWWGG 2 cut(s) 1733, 2717
FalI AAGNNNNNCTT 4 cut(s) 195, 227, 665, 697
FaqI GGGAC 2 cut(s) 896, 2613
FauI CCCGC 1 cut(s) 3465
FauNDI CATATG 1 cut(s) 3017
FbaI TGATCA 1 cut(s) 963
FriOI GRGCYC 4 cut(s) 384, 2094, 2725, 3144
GlaI GCGC 1 cut(s) 768
GsuI CTGGAG 4 cut(s) 1542, 2078, 2846, 3611
HaeII RGCGCY 1 cut(s) 770
HaeIII GGCC 2 cut(s) 2708, 3014
HapII CCGG 2 cut(s) 309, 2321
HgaI GACGC 2 cut(s) 1701, 1949
HhaI GCGC 1 cut(s) 769
Hin1I GRCGYC 1 cut(s) 767
Hin6I GCGC 1 cut(s) 767
HinP1I GCGC 1 cut(s) 767
HincII GTYRAC 3 cut(s) 82, 1954, 2983
HindII GTYRAC 3 cut(s) 82, 1954, 2983
HindIII AAGCTT 3 cut(s) 273, 2429, 3007
HpaII CCGG 2 cut(s) 309, 2321
HphI GGTGA 3 cut(s) 2495, 2585, 3137
Hpy166II GTNNAC 7 cut(s) 82, 655, 1954, 2983, 3128, 3371, 3542
Hpy8I GTNNAC 7 cut(s) 82, 655, 1954, 2983, 3128, 3371, 3542
HpyCH4IV ACGT 2 cut(s) 576, 2623
HpyF10VI GCNNNNNNNGC 8 cut(s) 217, 1037, 1127, 1450, 1819, 2162, 2219, 3421
HpySE526I ACGT 2 cut(s) 576, 2623
Hsp92I GRCGYC 1 cut(s) 767
HspAI GCGC 1 cut(s) 767
KasI GGCGCC 1 cut(s) 766
Kpn2I TCCGGA 2 cut(s) 308, 2320
Ksp22I TGATCA 1 cut(s) 963
KspI CCGCGG 1 cut(s) 94
Kzo9I GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
LmnI GCTCC 7 cut(s) 20, 379, 2097, 2608, 2728, 3090, 3630
LweI GCATC 7 cut(s) 157, 229, 1822, 1986, 2057, 2804, 3681
MabI ACCWGGT 1 cut(s) 2836
MaeII ACGT 2 cut(s) 576, 2623
MaeIII GTNAC 9 cut(s) 934, 1714, 1854, 2137, 2412, 2573, 2646, 3238, 3400
MalI GATC 8 cut(s) 786, 965, 1156, 1167, 1365, 1428, 1725, 1830
MboI GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
MfeI CAATTG 2 cut(s) 998, 1883
MflI RGATCY 3 cut(s) 1165, 1363, 1828
MhlI GDGCHC 6 cut(s) 162, 384, 974, 2094, 2725, 3144
MlsI TGGCCA 1 cut(s) 3014
MluNI TGGCCA 1 cut(s) 3014
Mly113I GGCGCC 1 cut(s) 767
MlyI GAGTC 5 cut(s) 515, 1064, 1570, 2837, 3050
MmeI TCCRAC 3 cut(s) 357, 1521, 2427
Mox20I TGGCCA 1 cut(s) 3014
Mph1103I ATGCAT 2 cut(s) 364, 1488
MroI TCCGGA 2 cut(s) 308, 2320
MroXI GAANNNNTTC 1 cut(s) 899
MscI TGGCCA 1 cut(s) 3014
MslI CAYNNNNRTG 4 cut(s) 700, 1903, 2223, 2991
Msp20I TGGCCA 1 cut(s) 3014
MspA1I CMGCKG 3 cut(s) 93, 318, 2701
MspI CCGG 2 cut(s) 309, 2321
MspR9I CCNGG 2 cut(s) 2825, 2838
MunI CAATTG 2 cut(s) 998, 1883
Mva1269I GAATGC 1 cut(s) 364
MvaI CCWGG 2 cut(s) 2825, 2838
MvnI CGCG 1 cut(s) 93
MwoI GCNNNNNNNGC 8 cut(s) 217, 1037, 1127, 1450, 1819, 2162, 2219, 3421
NarI GGCGCC 1 cut(s) 767
NdeI CATATG 1 cut(s) 3017
NdeII GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
NlaIV GGNNCC 3 cut(s) 381, 768, 2724
NmeAIII GCCGAG 2 cut(s) 196, 268
NmuCI GTSAC 3 cut(s) 934, 2573, 3400
NsiI ATGCAT 2 cut(s) 364, 1488
NspI RCATGY 1 cut(s) 1040
PaeI GCATGC 1 cut(s) 1040
PcsI WCGNNNNNNNCGW 1 cut(s) 1747
PctI GAATGC 1 cut(s) 364
PdmI GAANNNNTTC 1 cut(s) 899
PfeI GAWTC 8 cut(s) 299, 305, 601, 913, 1208, 1793, 2228, 3032
Pfl23II CGTACG 1 cut(s) 1651
PflFI GACNNNGTC 1 cut(s) 1900
PflMI CCANNNNNTGG 3 cut(s) 2405, 2701, 2824
PfoI TCCNGGA 1 cut(s) 2823
PleI GAGTC 5 cut(s) 514, 1063, 1570, 2836, 3049
PluTI GGCGCC 1 cut(s) 770
PpsI GAGTC 5 cut(s) 514, 1063, 1570, 2836, 3049
PpuMI RGGWCCY 1 cut(s) 247
PshAI GACNNNNGTC 1 cut(s) 1974
Psp124BI GAGCTC 2 cut(s) 2094, 3144
Psp1406I AACGTT 1 cut(s) 2623
Psp5II RGGWCCY 1 cut(s) 247
Psp6I CCWGG 2 cut(s) 2823, 2836
PspEI GGTNACC 3 cut(s) 1714, 1854, 2646
PspGI CCWGG 2 cut(s) 2823, 2836
PspLI CGTACG 1 cut(s) 1651
PspN4I GGNNCC 3 cut(s) 381, 768, 2724
PspPI GGNCC 3 cut(s) 247, 1342, 3726
PspPPI RGGWCCY 1 cut(s) 247
PstI CTGCAG 1 cut(s) 1363
PstNI CAGNNNCTG 2 cut(s) 2701, 3615
PsuI RGATCY 3 cut(s) 1165, 1363, 1828
PsyI GACNNNGTC 1 cut(s) 1900
PvuII CAGCTG 1 cut(s) 2701
RsaI GTAC 9 cut(s) 656, 1462, 1653, 1772, 1873, 2186, 2311, 2561, 3302
RsaNI GTAC 9 cut(s) 655, 1461, 1652, 1771, 1872, 2185, 2310, 2560, 3301
RseI CAYNNNNRTG 4 cut(s) 700, 1903, 2223, 2991
SacI GAGCTC 2 cut(s) 2094, 3144
SacII CCGCGG 1 cut(s) 94
Sau3AI GATC 8 cut(s) 784, 963, 1154, 1165, 1363, 1426, 1723, 1828
Sau96I GGNCC 3 cut(s) 247, 1342, 3726
ScaI AGTACT 1 cut(s) 3302
SchI GAGTC 5 cut(s) 515, 1064, 1570, 2837, 3050
ScrFI CCNGG 2 cut(s) 2825, 2838
SduI GDGCHC 6 cut(s) 162, 384, 974, 2094, 2725, 3144
SexAI ACCWGGT 1 cut(s) 2836
SfaNI GCATC 7 cut(s) 157, 229, 1822, 1986, 2057, 2804, 3681
SfcI CTRYAG 2 cut(s) 1359, 2027
SfoI GGCGCC 1 cut(s) 768
Sfr303I CCGCGG 1 cut(s) 94
SgrBI CCGCGG 1 cut(s) 94
SinI GGWCC 3 cut(s) 247, 1342, 3726
SmiMI CAYNNNNRTG 4 cut(s) 700, 1903, 2223, 2991
SmlI CTYRAG 2 cut(s) 689, 3329
SmoI CTYRAG 2 cut(s) 689, 3329
SpeI ACTAGT 2 cut(s) 1193, 1948
SphI GCATGC 1 cut(s) 1040
SsiI CCGC 8 cut(s) 91, 93, 318, 321, 1819, 2492, 3472, 3676
SspDI GGCGCC 1 cut(s) 766
SspI AATATT 2 cut(s) 1305, 2300
SstI GAGCTC 2 cut(s) 2094, 3144
StyD4I CCNGG 2 cut(s) 2823, 2836
StyI CCWWGG 2 cut(s) 1733, 2717
TaiI ACGT 2 cut(s) 579, 2626
TaqI TCGA 2 cut(s) 54, 750
TatI WGTACW 4 cut(s) 654, 1460, 1770, 3300
TauI GCSGC 3 cut(s) 96, 321, 1822
TfiI GAWTC 8 cut(s) 299, 305, 601, 913, 1208, 1793, 2228, 3032
TseFI GTSAC 3 cut(s) 934, 2573, 3400
Tsp45I GTSAC 3 cut(s) 934, 2573, 3400
TspGWI ACGGA 2 cut(s) 145, 2723
Tth111I GACNNNGTC 1 cut(s) 1900
Van91I CCANNNNNTGG 3 cut(s) 2405, 2701, 2824
VpaK11BI GGWCC 3 cut(s) 247, 1342, 3726
XagI CCTNNNNNAGG 1 cut(s) 3201
XbaI TCTAGA 2 cut(s) 847, 1595
XceI RCATGY 1 cut(s) 1040
XcmI CCANNNNNNNNNTGG 2 cut(s) 613, 2102
XmnI GAANNNNTTC 1 cut(s) 899
ZrmI AGTACT 1 cut(s) 3302
Zsp2I ATGCAT 2 cut(s) 364, 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.