pycom11g06560

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
5034347 .. 5037743
3397 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g06560.1

Sequence Viewer

Length: 3180 bp
ATGCTGAGGACTTACTGGACGATCGATCAGATCAAGACGGAAGCGTTGAGGCGGAAAATTGAAGCTGAATTTGGAAGTAGCACAAGCAAGGTACAAGACCTCATCTCTGCTTCTTTGCATGCTTTTGATGAGCCTGTAGACAGCAAGATAGAGGAAATTCTTGAGAGGCTAAGCTTCATTGTAGAACAAAAAGATGCCCTTGATTTGAAAAGAGGTAGTAGACACAAAATCTCACGAACATTGCTTTCAACTTCCTTAGTAGAAGGCTCTGATGTGTATGGAAGATATCATGAGAGGGAAACGATCATTCAGTTGTTGCTATCAAATGATGTCACTTGTAGTAAGATTGGCATTATTCCCATTGTGGGCATGGGTGGGATCGGAAAGACCACCCTTGCTCAGCTCTTATACAATGATGATAGAGTGAAGCAGCATTTTGATCTCCAGGCATGGGTTTGTACTTCTGATGAATTTGACGTTGTTAAGATCACACAAACAATTTATGCATCAGTCACTTCACAAACCTGTGATACCACAGACCTAAACCAGCTTCAAGTCAAACTCAAAGATGTTTTGGCGGGGAAGAAGTTTCTTTTTGTTCTTGATGATGTTTGGAACGAGAATTACAATATTTGGGATTCCTTAAGGCGCCCCTTCGAGTCTGGAGCTCATGGAAGTAAGATCATTGTCACCGCAAGGAATGATGGCGTTGCATCTACAATGGGTACTATTCAAACCCACTATTTAAAGCACTTACTTGAGGAAGACTGTTGGTTTTTATTTGCAAAACATGCCTCCAAAGATGCAAGTGGTGTTGTAGATCCAAATCTTGAGGTAATTGGAAGACAAATTGTTAGCAAGTGTAAAGGCCTTCCTTTAGCTGCAAAATCTCTCGGTGGTCTCTTACGCTCTGAACCAAATGTGGAGGAATGGGAAAATGTGCTAAAAAGTGATATATGGGAGTTGTCAGATGCAAAGATTGAAATTCTACCGGCTCTATGGCTAAGCTACCAGTACTTATCTCCGGTGTTGAAGCATTGTTTTGCTTATTGTTCGATATTTCCCAAAGATTATAGATTTCACAAGTCTGAATTAATTTTGTTGTGGATGGCCGAAGATCGATTACAACCCCAAAAGAAAACTAGGTTGGAATATGTTGGAGAGAAATACTTTGATGATCTAATCTCACGATCATTTTTTCAGTACTCGTCTTCAAATGATTGTTTCATTATGCATGATCTGATTCATGATTTGGCGACTTACGTATGTGGGGAATTTTGCATTAGATTGGAAGACCACGACTTCTCATTGGACGTTGTGAGCAAGGTTCGTCATTTTTCTTATATGCAATATTCATCTAATCTTAATTCTGAGATATTTGACATTATTTATGAAGCTAAGTATCTGCGCACCTTCATTCTTGGCAAAAGATATTGTTGGCAAACAATACGACTTGATCTCCTTTTAATGCTACAGTGTTTAAGAGTTCTCAATCTACCTGGGCATTATATCGCGGAGTTGCCTGATTCGATTAGCAACTTGAAGCATCTACGGTACCTCAACTTATGTGGGAATCCAATAAAGAAATTACCAGACACGGTATGCAGTTTGTATAATTTACAAACGTTGTTGGTGTCGAAATGTAGATATCTAGCTGAGTTGCCCACCAATTTGAGAAGACTTATCAACTTGCGCCATCTTGATTTCAGAGGTACGCAAATAAAAAAGACGCCCCCCCACATGGGCAAATTGAAAGATCTCCAAACATTTGGAGGTGAGTTTGTCTTGAGCAAAGATGCTGGCGGAAACATTGATGAGTTAAAGGGGTTTCAGCATTTGAGTGGAAATCTTCATATTTCAGGGCTTCAAAATATCAAACGTGCTGAGGATGCTTTGGAGGCCAAACTGAAGGACAAGAAGCTCAGCGAAATACGTTTGAAATGGGAAGGTGACACTATTGATTCTCAAAACGATAGCCGAGTGCTGGGCAACCTGCAGCCCAACACAAAACTAAAAGTACTCGCTATTGAAGGATATGAAGGTACAAAGTTTCCAGGTTGGTTAGGAGATGAGTCTTTCTCTAACCTCGTCACTATCCGACTTGTGGATTGTGAATATTGCTTCTCCCTGCCAGCATTGGGGCAGCTACCCTCCCTCAAAAGGCTTGAAATTTATGGGTTAAATGGAGTGGAATCAGTGGGGTCTGAGTTTTATGGGGGAATTAAACCTGCATTTAGATCTCTGGAGTTTCTGAGTTTCTGCCGTATGCAGGAATGGCAAGAGTGGTGTTTCCCTGGAGGTGAAGAAGAAAAAGGCGGACATTTTCCTAATCTTCGTGAGCTTAGTCTGAAGCGCTGTCCCAAACTAACGGGGAAAATACCGTTAGACTACTTCCCAAGACTTGAGTGGGTAAGTTTGCAGGAAGTTAATATCGAATCCCTTTCTTGTTCGCAAGAATGCAACAAATTCAATATTGAACTCCCATCCCTCCATGAGTTGGAAATATCAGATTGCCCGAATCTGGTATGTTTTGTGGGTGGTGGAGTGCTGCTCGCGCCCAACTTGAAGGAGATAACTATTAACCATTTTAAGAACTTGTGGTCGGTGCCCGAAGATATGCAAATCTCGCTCCCATCTCTTCCGTCTCTGTCCATAGAAGGGTGTAAAGAATTTAAATCATTTCCGGAAGGATCTAAATTCTCATCCCTCGATGATTTGAAGATAATCGAGTGCCCAGAATTTGTGGGTTTCCCCTATGATGGAGGACTGCAAGCGCCCAACTTGAAGGAGATGGAAATCTATGAATGTAACAAATTCAGGTCACTGCCAGAGGAGATGCACACCTCTCTCCCGTCTCTTCAGTCTCTGTCCATAGGAGGGTGTAAAGAATTTAAATCATTTCCGGAAGAATCTAAATTCTCATCCCTCGATGATTTGAAGATAATCGAGTGCCCAGAATTTGTGGGTTTCCCCCATGGAGGAGGACTGCAAGCGCCTAACTTGAAGAAGATGGAAATCAAAGAATGTAACAAATTCAGGTCACTGCCAGAGGAGATGCACGCCTCTCTCCCATCTCTTCAGTCTCTGTCCATAGGAGGGTGTAAAAATTGGAATCATTTCCGGAAGGGGGATTGCCGTCTAAATTGCGTTCACTCAGAATCTGGAGTTGTAAAAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1060

Amino Acids

120.48

Weight (kDa)

5.93

Isoelectric Point (pI)

52.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 101 - 267 2.2e-37 NB-ARC domain
WHD_DRP PF23559 353 - 419 1.8e-25 Disease resistance protein Winged helix domain
LRR_14 PF23598 467 - 548 1.1e-11 Leucine-rich repeat region
LRR_14 PF23598 489 - 816 1.4e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 604 - 726 3.8e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1409
Acc36I ACCTGC 2 cut(s) 2001, 2236
Acc65I GGTACC 1 cut(s) 1554
AccB1I GGYRCC 3 cut(s) 648, 1554, 2605
AccB7I CCANNNNNTGG 1 cut(s) 2497
AccI GTMKAC 2 cut(s) 138, 220
AccII CGCG 2 cut(s) 1514, 2555
AccIII TCCGGA 3 cut(s) 2683, 2902, 3120
AciI CCGC 6 cut(s) 52, 578, 693, 1514, 1803, 2316
AclI AACGTT 1 cut(s) 1625
AclWI GGATC 3 cut(s) 386, 815, 2698
AcoI YGGCCR 1 cut(s) 1110
AcuI CTGAAG 4 cut(s) 1928, 2369, 2843, 3062
AcyI GRCGYC 2 cut(s) 649, 1730
AfaI GTAC 9 cut(s) 93, 460, 727, 1016, 1205, 1556, 1714, 2019, 2044
AfeI AGCGCT 1 cut(s) 2354
AflII CTTAAG 1 cut(s) 643
AjnI CCWGG 4 cut(s) 444, 1498, 2053, 2293
AjuI GAANNNNNNNTTGG 4 cut(s) 54, 86, 1130, 1162
Alw21I GWGCWC 1 cut(s) 670
Alw26I GTCTC 5 cut(s) 905, 2649, 2859, 2868, 3087
AlwI GGATC 3 cut(s) 386, 815, 2698
AlwNI CAGNNNCTG 3 cut(s) 2866, 3085, 3161
Aor13HI TCCGGA 3 cut(s) 2683, 2902, 3120
Aor51HI AGCGCT 1 cut(s) 2354
AoxI GGCC 3 cut(s) 868, 1110, 1899
ApeKI GCWGC 5 cut(s) 430, 881, 1996, 2143, 2548
AseI ATTAAT 1 cut(s) 1094
Asp700I GAANNNNTTC 1 cut(s) 3116
Asp718I GGTACC 1 cut(s) 1554
AspLEI GCGC 7 cut(s) 651, 1410, 1695, 2355, 2557, 2776, 2995
AsuHPI GGTGA 4 cut(s) 682, 1787, 1961, 2312
BaeGI GKGCMC 3 cut(s) 2610, 2735, 2954
BanI GGYRCC 3 cut(s) 648, 1554, 2605
BanII GRGCYC 1 cut(s) 670
BarI GAAGNNNNNNTAC 2 cut(s) 1107, 1139
BbsI GAAGAC 5 cut(s) 771, 850, 1203, 1299, 1684
Bbv12I GWGCWC 1 cut(s) 670
BbvCI CCTCAGC 2 cut(s) 5, 1884
BbvI GCAGC 5 cut(s) 442, 868, 2008, 2155, 2535
BccI CCATC 9 cut(s) 698, 1102, 1704, 2491, 2641, 2753, 2785, 3004, 3079
BceAI ACGGC 2 cut(s) 2247, 3120
BciT130I CCWGG 4 cut(s) 446, 1500, 2055, 2295
BcoDI GTCTC 5 cut(s) 905, 2649, 2859, 2868, 3087
BfaI CTAG 2 cut(s) 1143, 1652
BfmI CTRYAG 3 cut(s) 135, 1472, 1994
BfoI RGCGCY 4 cut(s) 652, 2356, 2777, 2996
BfrI CTTAAG 1 cut(s) 643
BfuAI ACCTGC 2 cut(s) 2001, 2236
BglII AGATCT 2 cut(s) 1756, 2237
BisI GCNGC 5 cut(s) 431, 882, 1997, 2144, 2549
BlpI GCTNAGC 4 cut(s) 170, 399, 1004, 1922
BlsI GCNGC 5 cut(s) 432, 883, 1998, 2145, 2550
BmcAI AGTACT 3 cut(s) 1016, 1205, 2019
Bme1390I CCNGG 4 cut(s) 446, 1500, 2055, 2295
BmiI GGNNCC 3 cut(s) 650, 1556, 2607
BmrFI CCNGG 4 cut(s) 446, 1500, 2055, 2295
BpiI GAAGAC 5 cut(s) 771, 850, 1203, 1299, 1684
BplI GAGNNNNNCTC 4 cut(s) 2063, 2095, 2535, 2567
BpmI CTGGAG 4 cut(s) 428, 684, 2264, 2316
Bpu10I CCTNAGC 2 cut(s) 5, 1884
Bpu1102I GCTNAGC 4 cut(s) 170, 399, 1004, 1922
BpuEI CTTGAG 5 cut(s) 182, 779, 851, 1807, 2423
Bsa29I ATCGAT 2 cut(s) 24, 1120
BsaAI YACGTR 1 cut(s) 1264
BsaBI GATNNNNATC 3 cut(s) 825, 2795, 3014
BsaHI GRCGYC 2 cut(s) 649, 1730
BsaI GGTCTC 1 cut(s) 905
BsaJI CCNNGG 3 cut(s) 1499, 2293, 2974
BsaWI WCCGGW 4 cut(s) 1024, 2683, 2902, 3120
BsaXI ACNNNNNCTCC 2 cut(s) 1443, 1473
Bse118I RCCGGY 1 cut(s) 991
Bse1I ACTGG 2 cut(s) 20, 1012
Bse3DI GCAATG 1 cut(s) 239
Bse8I GATNNNNATC 3 cut(s) 825, 2795, 3014
BseAI TCCGGA 3 cut(s) 2683, 2902, 3120
BseBI CCWGG 4 cut(s) 446, 1500, 2055, 2295
BseCI ATCGAT 2 cut(s) 24, 1120
BseDI CCNNGG 3 cut(s) 1499, 2293, 2974
BseGI GGATG 5 cut(s) 1113, 1894, 2483, 2702, 2921
BseJI GATNNNNATC 3 cut(s) 825, 2795, 3014
BseMI GCAATG 1 cut(s) 239
BseMII CTCAG 8 cut(s) 413, 1362, 1647, 1875, 1936, 2196, 2243, 3168
BseNI ACTGG 2 cut(s) 20, 1012
BseRI GAGGAG 3 cut(s) 2846, 2994, 3065
BseSI GKGCMC 3 cut(s) 2610, 2735, 2954
BseXI GCAGC 5 cut(s) 442, 868, 2008, 2155, 2535
BseYI CCCAGC 1 cut(s) 1984
Bsh1236I CGCG 2 cut(s) 1514, 2555
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 3 cut(s) 870, 1112, 1901
BshNI GGYRCC 3 cut(s) 648, 1554, 2605
BshVI ATCGAT 2 cut(s) 24, 1120
BsiEI CGRYCG 1 cut(s) 24
BsiHKAI GWGCWC 1 cut(s) 670
BsiSI CCGG 5 cut(s) 992, 1025, 2684, 2903, 3121
BslFI GGGAC 1 cut(s) 2343
BsmAI GTCTC 5 cut(s) 905, 2649, 2859, 2868, 3087
BsmBI CGTCTC 2 cut(s) 2649, 2859
BsmFI GGGAC 1 cut(s) 2343
BsmI GAATGC 1 cut(s) 2462
BsnI GGCC 3 cut(s) 870, 1112, 1901
Bso31I GGTCTC 1 cut(s) 905
Bsp1286I GDGCHC 4 cut(s) 670, 2610, 2735, 2954
Bsp13I TCCGGA 3 cut(s) 2683, 2902, 3120
Bsp1720I GCTNAGC 4 cut(s) 170, 399, 1004, 1922
Bsp19I CCATGG 1 cut(s) 2974
BspACI CCGC 6 cut(s) 52, 578, 693, 1514, 1803, 2316
BspANI GGCC 3 cut(s) 870, 1112, 1901
BspCNI CTCAG 8 cut(s) 412, 1363, 1648, 1876, 1935, 2197, 2244, 3167
BspDI ATCGAT 2 cut(s) 24, 1120
BspEI TCCGGA 3 cut(s) 2683, 2902, 3120
BspFNI CGCG 2 cut(s) 1514, 2555
BspHI TCATGA 2 cut(s) 289, 1246
BspLI GGNNCC 3 cut(s) 650, 1556, 2607
BspMAI CTGCAG 1 cut(s) 1998
BspMI ACCTGC 2 cut(s) 2001, 2236
BspPI GGATC 3 cut(s) 386, 815, 2698
BspT107I GGYRCC 3 cut(s) 648, 1554, 2605
BspTI CTTAAG 1 cut(s) 643
BspTNI GGTCTC 1 cut(s) 905
BsrDI GCAATG 1 cut(s) 239
BsrFI RCCGGY 1 cut(s) 991
BsrI ACTGG 2 cut(s) 20, 1012
BssAI RCCGGY 1 cut(s) 991
BssECI CCNNGG 3 cut(s) 1499, 2293, 2974
BssNI GRCGYC 2 cut(s) 649, 1730
BssT1I CCWWGG 1 cut(s) 2974
Bst2UI CCWGG 4 cut(s) 446, 1500, 2055, 2295
Bst4CI ACNGT 5 cut(s) 770, 1476, 1554, 1600, 2382
Bst6I CTCTTC 3 cut(s) 2643, 2862, 3081
BstACI GRCGYC 2 cut(s) 649, 1730
BstAFI CTTAAG 1 cut(s) 643
BstAPI GCANNNNNTGC 1 cut(s) 791
BstBAI YACGTR 1 cut(s) 1264
BstC8I GCNNGC 7 cut(s) 120, 1801, 2133, 2553, 2772, 2991, 3060
BstDSI CCRYGG 1 cut(s) 2974
BstF5I GGATG 5 cut(s) 1113, 1894, 2483, 2702, 2921
BstFNI CGCG 2 cut(s) 1514, 2555
BstH2I RGCGCY 4 cut(s) 652, 2356, 2777, 2996
BstHHI GCGC 7 cut(s) 651, 1410, 1695, 2355, 2557, 2776, 2995
BstMAI GTCTC 5 cut(s) 905, 2649, 2859, 2868, 3087
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 6 cut(s) 791, 1889, 1898, 2275, 2554, 2626
BstNI CCWGG 4 cut(s) 446, 1500, 2055, 2295
BstNSI RCATGY 2 cut(s) 122, 794
BstSCI CCNGG 4 cut(s) 444, 1498, 2053, 2293
BstSFI CTRYAG 3 cut(s) 135, 1472, 1994
BstSLI GKGCMC 3 cut(s) 2610, 2735, 2954
BstSNI TACGTA 1 cut(s) 1264
BstUI CGCG 2 cut(s) 1514, 2555
BstV1I GCAGC 5 cut(s) 442, 868, 2008, 2155, 2535
BstV2I GAAGAC 5 cut(s) 771, 850, 1203, 1299, 1684
BstX2I RGATCY 4 cut(s) 820, 1756, 2237, 2690
BstXI CCANNNNNNTGG 1 cut(s) 1769
BstYI RGATCY 4 cut(s) 820, 1756, 2237, 2690
Bsu15I ATCGAT 2 cut(s) 24, 1120
BsuRI GGCC 3 cut(s) 870, 1112, 1901
BsuTUI ATCGAT 2 cut(s) 24, 1120
BtgI CCRYGG 1 cut(s) 2974
BtsCI GGATG 5 cut(s) 1113, 1894, 2483, 2702, 2921
BtsI GCAGTG 2 cut(s) 2822, 3041
BtsIMutI CAGTG 4 cut(s) 1481, 2202, 2822, 3041
BveI ACCTGC 2 cut(s) 2001, 2236
Cac8I GCNNGC 7 cut(s) 120, 1801, 2133, 2553, 2772, 2991, 3060
CaiI CAGNNNCTG 3 cut(s) 2866, 3085, 3161
CciI TCATGA 2 cut(s) 289, 1246
CfoI GCGC 7 cut(s) 651, 1410, 1695, 2355, 2557, 2776, 2995
Cfr10I RCCGGY 1 cut(s) 991
ClaI ATCGAT 2 cut(s) 24, 1120
CseI GACGC 1 cut(s) 1738
Csp6I GTAC 9 cut(s) 92, 459, 726, 1015, 1204, 1555, 1713, 2018, 2043
CspCI CAANNNNNGTGG 2 cut(s) 1549, 1584
CviQI GTAC 9 cut(s) 92, 459, 726, 1015, 1204, 1555, 1713, 2018, 2043
DinI GGCGCC 1 cut(s) 650
DraI TTTAAA 3 cut(s) 747, 2674, 2893
EaeI YGGCCR 1 cut(s) 1110
Eam1104I CTCTTC 3 cut(s) 2643, 2862, 3081
EarI CTCTTC 3 cut(s) 2643, 2862, 3081
EciI GGCGGA 3 cut(s) 67, 1818, 2331
Ecl136II GAGCTC 1 cut(s) 668
Eco105I TACGTA 1 cut(s) 1264
Eco130I CCWWGG 1 cut(s) 2974
Eco147I AGGCCT 1 cut(s) 870
Eco24I GRGCYC 1 cut(s) 670
Eco31I GGTCTC 1 cut(s) 905
Eco32I GATATC 2 cut(s) 287, 1649
Eco47III AGCGCT 1 cut(s) 2354
Eco53kI GAGCTC 1 cut(s) 668
Eco57I CTGAAG 4 cut(s) 1928, 2369, 2843, 3062
EcoICRI GAGCTC 1 cut(s) 668
EcoRII CCWGG 4 cut(s) 444, 1498, 2053, 2293
EcoRV GATATC 2 cut(s) 287, 1649
EcoT14I CCWWGG 1 cut(s) 2974
EcoT22I ATGCAT 2 cut(s) 508, 1236
EcoT38I GRGCYC 1 cut(s) 670
EgeI GGCGCC 1 cut(s) 650
EheI GGCGCC 1 cut(s) 650
ErhI CCWWGG 1 cut(s) 2974
Esp3I CGTCTC 2 cut(s) 2649, 2859
FalI AAGNNNNNCTT 2 cut(s) 183, 215
FaqI GGGAC 1 cut(s) 2343
FauI CCCGC 1 cut(s) 571
FblI GTMKAC 2 cut(s) 138, 220
Fnu4HI GCNGC 5 cut(s) 431, 882, 1997, 2144, 2549
FokI GGATG 5 cut(s) 1120, 1901, 2470, 2689, 2908
FriOI GRGCYC 1 cut(s) 670
Fsp4HI GCNGC 5 cut(s) 431, 882, 1997, 2144, 2549
FspBI CTAG 2 cut(s) 1143, 1652
FspI TGCGCA 1 cut(s) 1409
GlaI GCGC 7 cut(s) 650, 1409, 1694, 2354, 2556, 2775, 2994
GluI GCNGC 5 cut(s) 431, 882, 1997, 2144, 2549
GsaI CCCAGC 1 cut(s) 1988
GsuI CTGGAG 4 cut(s) 428, 684, 2264, 2316
HaeII RGCGCY 4 cut(s) 652, 2356, 2777, 2996
HaeIII GGCC 3 cut(s) 870, 1112, 1901
HapII CCGG 5 cut(s) 992, 1025, 2684, 2903, 3121
HgaI GACGC 1 cut(s) 1738
HhaI GCGC 7 cut(s) 651, 1410, 1695, 2355, 2557, 2776, 2995
Hin1I GRCGYC 2 cut(s) 649, 1730
Hin6I GCGC 7 cut(s) 649, 1408, 1693, 2353, 2555, 2774, 2993
HinP1I GCGC 7 cut(s) 649, 1408, 1693, 2353, 2555, 2774, 2993
HindIII AAGCTT 1 cut(s) 172
HpaII CCGG 5 cut(s) 992, 1025, 2684, 2903, 3121
HphI GGTGA 4 cut(s) 682, 1787, 1961, 2312
Hpy166II GTNNAC 3 cut(s) 139, 221, 3151
Hpy8I GTNNAC 3 cut(s) 139, 221, 3151
HpyCH4III ACNGT 5 cut(s) 770, 1476, 1554, 1600, 2382
HpyCH4IV ACGT 6 cut(s) 477, 1263, 1314, 1625, 1879, 1933
HpyF10VI GCNNNNNNNGC 6 cut(s) 791, 1889, 1898, 2275, 2554, 2626
HpySE526I ACGT 6 cut(s) 477, 1263, 1314, 1625, 1879, 1933
Hsp92I GRCGYC 2 cut(s) 649, 1730
HspAI GCGC 7 cut(s) 649, 1408, 1693, 2353, 2555, 2774, 2993
KasI GGCGCC 1 cut(s) 648
Kpn2I TCCGGA 3 cut(s) 2683, 2902, 3120
KpnI GGTACC 1 cut(s) 1558
LmnI GCTCC 2 cut(s) 665, 2634
Lsp1109I GCAGC 5 cut(s) 442, 868, 2008, 2155, 2535
MaeI CTAG 2 cut(s) 1143, 1652
MaeII ACGT 6 cut(s) 477, 1263, 1314, 1625, 1879, 1933
MaeIII GTNAC 9 cut(s) 331, 511, 688, 1949, 2089, 2807, 2820, 3026, 3039
MflI RGATCY 4 cut(s) 820, 1756, 2237, 2690
MhlI GDGCHC 4 cut(s) 670, 2610, 2735, 2954
Mly113I GGCGCC 1 cut(s) 649
MlyI GAGTC 2 cut(s) 668, 2081
MmeI TCCRAC 4 cut(s) 1128, 1138, 2122, 2478
Mph1103I ATGCAT 2 cut(s) 508, 1236
MroI TCCGGA 3 cut(s) 2683, 2902, 3120
MroXI GAANNNNTTC 1 cut(s) 3116
MslI CAYNNNNRTG 1 cut(s) 1839
MspCI CTTAAG 1 cut(s) 643
MspI CCGG 5 cut(s) 992, 1025, 2684, 2903, 3121
MspR9I CCNGG 4 cut(s) 446, 1500, 2055, 2295
Mva1269I GAATGC 1 cut(s) 2462
MvaI CCWGG 4 cut(s) 446, 1500, 2055, 2295
MvnI CGCG 2 cut(s) 1514, 2555
MwoI GCNNNNNNNGC 6 cut(s) 791, 1889, 1898, 2275, 2554, 2626
NarI GGCGCC 1 cut(s) 649
NcoI CCATGG 1 cut(s) 2974
NlaIV GGNNCC 3 cut(s) 650, 1556, 2607
NmeAIII GCCGAG 1 cut(s) 2003
NmuCI GTSAC 7 cut(s) 331, 511, 688, 1949, 2089, 2820, 3039
NsbI TGCGCA 1 cut(s) 1409
NsiI ATGCAT 2 cut(s) 508, 1236
NspI RCATGY 2 cut(s) 122, 794
PaeI GCATGC 1 cut(s) 122
PagI TCATGA 2 cut(s) 289, 1246
PceI AGGCCT 1 cut(s) 870
PctI GAATGC 1 cut(s) 2462
PdmI GAANNNNTTC 1 cut(s) 3116
PflMI CCANNNNNTGG 1 cut(s) 2497
PkrI GCNGC 5 cut(s) 432, 883, 1998, 2145, 2550
Ple19I CGATCG 1 cut(s) 24
PleI GAGTC 2 cut(s) 667, 2080
PluTI GGCGCC 1 cut(s) 652
PpsI GAGTC 2 cut(s) 667, 2080
Ppu21I YACGTR 1 cut(s) 1264
PshBI ATTAAT 1 cut(s) 1094
Psp124BI GAGCTC 1 cut(s) 670
Psp1406I AACGTT 1 cut(s) 1625
Psp6I CCWGG 4 cut(s) 444, 1498, 2053, 2293
PspFI CCCAGC 1 cut(s) 1984
PspGI CCWGG 4 cut(s) 444, 1498, 2053, 2293
PspN4I GGNNCC 3 cut(s) 650, 1556, 2607
PsrI GAACNNNNNNTAC 2 cut(s) 608, 640
PstI CTGCAG 1 cut(s) 1998
PstNI CAGNNNCTG 3 cut(s) 2866, 3085, 3161
PsuI RGATCY 4 cut(s) 820, 1756, 2237, 2690
PvuI CGATCG 1 cut(s) 24
RsaI GTAC 9 cut(s) 93, 460, 727, 1016, 1205, 1556, 1714, 2019, 2044
RsaNI GTAC 9 cut(s) 92, 459, 726, 1015, 1204, 1555, 1713, 2018, 2043
RseI CAYNNNNRTG 1 cut(s) 1839
SacI GAGCTC 1 cut(s) 670
SatI GCNGC 5 cut(s) 431, 882, 1997, 2144, 2549
ScaI AGTACT 3 cut(s) 1016, 1205, 2019
SchI GAGTC 2 cut(s) 668, 2081
ScrFI CCNGG 4 cut(s) 446, 1500, 2055, 2295
SduI GDGCHC 4 cut(s) 670, 2610, 2735, 2954
SfcI CTRYAG 3 cut(s) 135, 1472, 1994
SfoI GGCGCC 1 cut(s) 650
SmiI ATTTAAAT 2 cut(s) 2674, 2893
SmiMI CAYNNNNRTG 1 cut(s) 1839
SmlI CTYRAG 6 cut(s) 161, 643, 758, 830, 1786, 2402
SmoI CTYRAG 6 cut(s) 161, 643, 758, 830, 1786, 2402
SnaBI TACGTA 1 cut(s) 1264
SphI GCATGC 1 cut(s) 122
SseBI AGGCCT 1 cut(s) 870
SsiI CCGC 6 cut(s) 52, 578, 693, 1514, 1803, 2316
SspDI GGCGCC 1 cut(s) 648
SspI AATATT 4 cut(s) 631, 1352, 2117, 2473
SspMI CTAG 2 cut(s) 1143, 1652
SstI GAGCTC 1 cut(s) 670
StuI AGGCCT 1 cut(s) 870
StyD4I CCNGG 4 cut(s) 444, 1498, 2053, 2293
StyI CCWWGG 1 cut(s) 2974
SwaI ATTTAAAT 2 cut(s) 2674, 2893
TaaI ACNGT 5 cut(s) 770, 1476, 1554, 1600, 2382
TaiI ACGT 6 cut(s) 480, 1266, 1317, 1628, 1882, 1936
TatI WGTACW 4 cut(s) 458, 1014, 1203, 2017
TscAI CASTG 4 cut(s) 1481, 2202, 2829, 3048
TseFI GTSAC 7 cut(s) 331, 511, 688, 1949, 2089, 2820, 3039
TseI GCWGC 5 cut(s) 430, 881, 1996, 2143, 2548
Tsp45I GTSAC 7 cut(s) 331, 511, 688, 1949, 2089, 2820, 3039
TspGWI ACGGA 2 cut(s) 53, 2631
TspRI CASTG 4 cut(s) 1481, 2202, 2829, 3048
Van91I CCANNNNNTGG 1 cut(s) 2497
Vha464I CTTAAG 1 cut(s) 643
VspI ATTAAT 1 cut(s) 1094
XceI RCATGY 2 cut(s) 122, 794
XcmI CCANNNNNNNNNTGG 2 cut(s) 367, 2403
XmiI GTMKAC 2 cut(s) 138, 220
XmnI GAANNNNTTC 1 cut(s) 3116
XspI CTAG 2 cut(s) 1143, 1652
ZrmI AGTACT 3 cut(s) 1016, 1205, 2019
Zsp2I ATGCAT 2 cut(s) 508, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.