Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 11 - 102 | 1.2e-17 | Rx N-terminal domain |
| NB-ARC | PF00931 | 177 - 348 | 1e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 506 | 1.8e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 579 - 874 | 3.2e-29 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 693 - 820 | 3.5e-39 | R13L1/DRL21 LRRs |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1037 |
| Acc16I | TGCGCA | 1 cut(s) | 2145 |
| Acc36I | ACCTGC | 1 cut(s) | 1037 |
| Acc65I | GGTACC | 1 cut(s) | 965 |
| AccB1I | GGYRCC | 1 cut(s) | 965 |
| AccI | GTMKAC | 4 cut(s) | 648, 979, 2917, 2952 |
| AccII | CGCG | 1 cut(s) | 2109 |
| AciI | CCGC | 8 cut(s) | 111, 319, 563, 749, 2109, 2319, 2394, 2759 |
| AclI | AACGTT | 1 cut(s) | 3193 |
| AclWI | GGATC | 3 cut(s) | 885, 1055, 1338 |
| AcsI | RAATTY | 5 cut(s) | 710, 827, 862, 2671, 3096 |
| AcuI | CTGAAG | 4 cut(s) | 1292, 1374, 1754, 2081 |
| AcvI | CACGTG | 1 cut(s) | 938 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 114, 605, 2009, 2175, 2590, 2840, 2996, 3134 |
| AflII | CTTAAG | 1 cut(s) | 2936 |
| AflIII | ACRYGT | 3 cut(s) | 935, 1444, 1699 |
| AjnI | CCWGG | 2 cut(s) | 383, 2332 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2174, 2206 |
| Alw21I | GWGCWC | 1 cut(s) | 1758 |
| Alw26I | GTCTC | 4 cut(s) | 1531, 2159, 2711, 3200 |
| AlwI | GGATC | 3 cut(s) | 885, 1055, 1338 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1894 |
| Ama87I | CYCGRG | 4 cut(s) | 335, 2125, 2300, 2534 |
| AoxI | GGCC | 2 cut(s) | 540, 3221 |
| ApeKI | GCWGC | 8 cut(s) | 118, 315, 1121, 1786, 2425, 2880, 3001, 3004 |
| ApoI | RAATTY | 5 cut(s) | 710, 827, 862, 2671, 3096 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2735, 2767 |
| AseI | ATTAAT | 4 cut(s) | 1844, 1949, 2462, 2466 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 789, 2613, 2659, 2829 |
| Asp718I | GGTACC | 1 cut(s) | 965 |
| AspLEI | GCGC | 4 cut(s) | 2109, 2146, 2707, 2880 |
| AspS9I | GGNCC | 1 cut(s) | 3222 |
| AsuHPI | GGTGA | 5 cut(s) | 2240, 2488, 2920, 2978, 3067 |
| AsuII | TTCGAA | 2 cut(s) | 2741, 3044 |
| AvaI | CYCGRG | 4 cut(s) | 335, 2125, 2300, 2534 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 323, 356 |
| BanI | GGYRCC | 1 cut(s) | 965 |
| BanII | GRGCYC | 1 cut(s) | 1113 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1347, 1379, 2598, 2630 |
| BbrPI | CACGTG | 1 cut(s) | 938 |
| BbsI | GAAGAC | 3 cut(s) | 110, 484, 815 |
| Bbv12I | GWGCWC | 1 cut(s) | 1758 |
| BbvI | GCAGC | 8 cut(s) | 105, 327, 1108, 1773, 2437, 2867, 2988, 2991 |
| BceAI | ACGGC | 3 cut(s) | 1604, 2833, 3070 |
| BciT130I | CCWGG | 2 cut(s) | 385, 2334 |
| BclI | TGATCA | 1 cut(s) | 1627 |
| BcoDI | GTCTC | 4 cut(s) | 1531, 2159, 2711, 3200 |
| BfaI | CTAG | 9 cut(s) | 198, 510, 782, 1421, 1673, 1791, 1919, 2054, 2355 |
| BfoI | RGCGCY | 1 cut(s) | 2881 |
| BfrI | CTTAAG | 1 cut(s) | 2936 |
| BfuAI | ACCTGC | 1 cut(s) | 1037 |
| BglII | AGATCT | 4 cut(s) | 778, 1357, 2023, 2347 |
| BmcAI | AGTACT | 2 cut(s) | 1409, 1677 |
| Bme1390I | CCNGG | 2 cut(s) | 385, 2334 |
| BmeT110I | CYCGRG | 4 cut(s) | 335, 2125, 2300, 2534 |
| BmgT120I | GGNCC | 1 cut(s) | 3222 |
| BmiI | GGNNCC | 3 cut(s) | 381, 967, 1112 |
| BmrFI | CCNGG | 2 cut(s) | 385, 2334 |
| BmsI | GCATC | 6 cut(s) | 160, 1622, 1822, 1986, 2130, 2146 |
| BoxI | GACNNNNGTC | 1 cut(s) | 372 |
| BpiI | GAAGAC | 3 cut(s) | 110, 484, 815 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 6 cut(s) | 107, 1551, 2012, 2285, 3101, 3206 |
| Bpu14I | TTCGAA | 2 cut(s) | 2741, 3044 |
| BpuEI | CTTGAG | 4 cut(s) | 904, 1290, 2468, 2977 |
| BsaAI | YACGTR | 3 cut(s) | 938, 1696, 1700 |
| BsaI | GGTCTC | 2 cut(s) | 2159, 2711 |
| BsaJI | CCNNGG | 6 cut(s) | 94, 383, 2003, 2160, 2535, 3034 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2421, 2451 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 114, 605, 2009, 2175, 2590, 2840, 2996, 3134 |
| Bse118I | RCCGGY | 1 cut(s) | 1231 |
| Bse1I | ACTGG | 5 cut(s) | 580, 2071, 2595, 3118, 3189 |
| Bse3DI | GCAATG | 1 cut(s) | 2753 |
| BseBI | CCWGG | 2 cut(s) | 385, 2334 |
| BseDI | CCNNGG | 6 cut(s) | 94, 383, 2003, 2160, 2535, 3034 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 114, 605, 2009, 2175, 2590, 2840, 2996, 3134 |
| BseMI | GCAATG | 1 cut(s) | 2753 |
| BseMII | CTCAG | 5 cut(s) | 202, 990, 1578, 2665, 2738 |
| BseNI | ACTGG | 5 cut(s) | 580, 2071, 2595, 3118, 3189 |
| BseRI | GAGGAG | 2 cut(s) | 191, 2624 |
| BseXI | GCAGC | 8 cut(s) | 105, 327, 1108, 1773, 2437, 2867, 2988, 2991 |
| BseYI | CCCAGC | 1 cut(s) | 113 |
| BsgI | GTGCAG | 1 cut(s) | 3146 |
| Bsh1236I | CGCG | 1 cut(s) | 2109 |
| BshFI | GGCC | 2 cut(s) | 542, 3223 |
| BshNI | GGYRCC | 1 cut(s) | 965 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1758 |
| BsiHKCI | CYCGRG | 4 cut(s) | 335, 2125, 2300, 2534 |
| BsiSI | CCGG | 2 cut(s) | 77, 1232 |
| BsiWI | CGTACG | 1 cut(s) | 1696 |
| BslFI | GGGAC | 3 cut(s) | 1649, 1692, 2517 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 114, 605, 2009, 2175, 2590, 2840, 2996, 3134 |
| BsmAI | GTCTC | 4 cut(s) | 1531, 2159, 2711, 3200 |
| BsmFI | GGGAC | 3 cut(s) | 1649, 1692, 2517 |
| BsmI | GAATGC | 4 cut(s) | 1048, 1615, 2549, 2707 |
| BsnI | GGCC | 2 cut(s) | 542, 3223 |
| Bso31I | GGTCTC | 2 cut(s) | 2159, 2711 |
| BsoBI | CYCGRG | 4 cut(s) | 335, 2125, 2300, 2534 |
| Bsp119I | TTCGAA | 2 cut(s) | 2741, 3044 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1113, 1758 |
| Bsp1407I | TGTACA | 1 cut(s) | 2868 |
| BspACI | CCGC | 8 cut(s) | 111, 319, 563, 749, 2109, 2319, 2394, 2759 |
| BspANI | GGCC | 2 cut(s) | 542, 3223 |
| BspCNI | CTCAG | 5 cut(s) | 201, 991, 1577, 2664, 2739 |
| BspFNI | CGCG | 1 cut(s) | 2109 |
| BspHI | TCATGA | 1 cut(s) | 358 |
| BspLI | GGNNCC | 3 cut(s) | 381, 967, 1112 |
| BspMI | ACCTGC | 1 cut(s) | 1037 |
| BspPI | GGATC | 3 cut(s) | 885, 1055, 1338 |
| BspT104I | TTCGAA | 2 cut(s) | 2741, 3044 |
| BspT107I | GGYRCC | 1 cut(s) | 965 |
| BspTI | CTTAAG | 1 cut(s) | 2936 |
| BspTNI | GGTCTC | 2 cut(s) | 2159, 2711 |
| BsrDI | GCAATG | 1 cut(s) | 2753 |
| BsrFI | RCCGGY | 1 cut(s) | 1231 |
| BsrGI | TGTACA | 1 cut(s) | 2868 |
| BsrI | ACTGG | 5 cut(s) | 580, 2071, 2595, 3118, 3189 |
| BssAI | RCCGGY | 1 cut(s) | 1231 |
| BssECI | CCNNGG | 6 cut(s) | 94, 383, 2003, 2160, 2535, 3034 |
| BssNAI | GTATAC | 1 cut(s) | 649 |
| BssT1I | CCWWGG | 2 cut(s) | 2003, 2160 |
| Bst1107I | GTATAC | 1 cut(s) | 649 |
| Bst2UI | CCWGG | 2 cut(s) | 385, 2334 |
| Bst4CI | ACNGT | 8 cut(s) | 859, 1292, 1387, 1640, 1680, 2482, 2903, 3038 |
| Bst6I | CTCTTC | 4 cut(s) | 40, 498, 1209, 2619 |
| BstAFI | CTTAAG | 1 cut(s) | 2936 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2767 |
| BstAUI | TGTACA | 1 cut(s) | 2868 |
| BstBAI | YACGTR | 3 cut(s) | 938, 1696, 1700 |
| BstBI | TTCGAA | 2 cut(s) | 2741, 3044 |
| BstC8I | GCNNGC | 3 cut(s) | 955, 2563, 3125 |
| BstDSI | CCRYGG | 1 cut(s) | 3034 |
| BstFNI | CGCG | 1 cut(s) | 2109 |
| BstH2I | RGCGCY | 1 cut(s) | 2881 |
| BstHHI | GCGC | 4 cut(s) | 2109, 2146, 2707, 2880 |
| BstMAI | GTCTC | 4 cut(s) | 1531, 2159, 2711, 3200 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 220, 1590, 1819, 2704, 2767 |
| BstNI | CCWGG | 2 cut(s) | 385, 2334 |
| BstNSI | RCATGY | 4 cut(s) | 957, 1448, 2150, 2770 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 372 |
| BstSCI | CCNGG | 2 cut(s) | 383, 2332 |
| BstSNI | TACGTA | 1 cut(s) | 1696 |
| BstUI | CGCG | 1 cut(s) | 2109 |
| BstV1I | GCAGC | 8 cut(s) | 105, 327, 1108, 1773, 2437, 2867, 2988, 2991 |
| BstV2I | GAAGAC | 3 cut(s) | 110, 484, 815 |
| BstX2I | RGATCY | 7 cut(s) | 778, 877, 1060, 1330, 1357, 2023, 2347 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 391, 2790 |
| BstYI | RGATCY | 7 cut(s) | 778, 877, 1060, 1330, 1357, 2023, 2347 |
| BstZ17I | GTATAC | 1 cut(s) | 649 |
| BsuRI | GGCC | 2 cut(s) | 542, 3223 |
| BtgI | CCRYGG | 1 cut(s) | 3034 |
| BtsI | GCAGTG | 1 cut(s) | 2915 |
| BtsIMutI | CAGTG | 5 cut(s) | 1367, 2064, 2588, 2915, 3125 |
| BveI | ACCTGC | 1 cut(s) | 1037 |
| Cac8I | GCNNGC | 3 cut(s) | 955, 2563, 3125 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1894 |
| CciI | TCATGA | 1 cut(s) | 358 |
| CfoI | GCGC | 4 cut(s) | 2109, 2146, 2707, 2880 |
| Cfr10I | RCCGGY | 1 cut(s) | 1231 |
| Cfr13I | GGNCC | 1 cut(s) | 3222 |
| CseI | GACGC | 2 cut(s) | 1900, 1949 |
| Eam1104I | CTCTTC | 4 cut(s) | 40, 498, 1209, 2619 |
| EarI | CTCTTC | 4 cut(s) | 40, 498, 1209, 2619 |
| Eco105I | TACGTA | 1 cut(s) | 1696 |
| Eco130I | CCWWGG | 2 cut(s) | 2003, 2160 |
| Eco24I | GRGCYC | 1 cut(s) | 1113 |
| Eco31I | GGTCTC | 2 cut(s) | 2159, 2711 |
| Eco57I | CTGAAG | 4 cut(s) | 1292, 1374, 1754, 2081 |
| Eco72I | CACGTG | 1 cut(s) | 938 |
| Eco88I | CYCGRG | 4 cut(s) | 335, 2125, 2300, 2534 |
| EcoRII | CCWGG | 2 cut(s) | 383, 2332 |
| EcoT14I | CCWWGG | 2 cut(s) | 2003, 2160 |
| EcoT22I | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |
| EcoT38I | GRGCYC | 1 cut(s) | 1113 |
| ErhI | CCWWGG | 2 cut(s) | 2003, 2160 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 423, 455, 1019, 1051 |
| FaqI | GGGAC | 3 cut(s) | 1649, 1692, 2517 |
| FauNDI | CATATG | 1 cut(s) | 1196 |
| FbaI | TGATCA | 1 cut(s) | 1627 |
| FblI | GTMKAC | 4 cut(s) | 648, 979, 2917, 2952 |
| FriOI | GRGCYC | 1 cut(s) | 1113 |
| FspBI | CTAG | 9 cut(s) | 198, 510, 782, 1421, 1673, 1791, 1919, 2054, 2355 |
| FspI | TGCGCA | 1 cut(s) | 2145 |
| GlaI | GCGC | 4 cut(s) | 2108, 2145, 2706, 2879 |
| GsaI | CCCAGC | 1 cut(s) | 117 |
| GsuI | CTGGAG | 6 cut(s) | 107, 1551, 2012, 2285, 3101, 3206 |
| HaeII | RGCGCY | 1 cut(s) | 2881 |
| HaeIII | GGCC | 2 cut(s) | 542, 3223 |
| HapII | CCGG | 2 cut(s) | 77, 1232 |
| HgaI | GACGC | 2 cut(s) | 1900, 1949 |
| HhaI | GCGC | 4 cut(s) | 2109, 2146, 2707, 2880 |
| Hin6I | GCGC | 4 cut(s) | 2107, 2144, 2705, 2878 |
| HinP1I | GCGC | 4 cut(s) | 2107, 2144, 2705, 2878 |
| HincII | GTYRAC | 4 cut(s) | 85, 424, 816, 2953 |
| HindII | GTYRAC | 4 cut(s) | 85, 424, 816, 2953 |
| HindIII | AAGCTT | 3 cut(s) | 1736, 2513, 2573 |
| HinfI | GANTC | 8 cut(s) | 305, 506, 663, 1562, 2305, 2609, 2825, 2981 |
| HpaII | CCGG | 2 cut(s) | 77, 1232 |
| HphI | GGTGA | 5 cut(s) | 2240, 2488, 2920, 2978, 3067 |
| Hpy99I | CGWCG | 2 cut(s) | 1018, 1069 |
| HpyAV | CCTTC | 9 cut(s) | 290, 516, 938, 980, 1045, 2450, 2786, 2831, 3128 |
| HpyCH4III | ACNGT | 8 cut(s) | 859, 1292, 1387, 1640, 1680, 2482, 2903, 3038 |
| HpyCH4IV | ACGT | 9 cut(s) | 158, 812, 937, 1147, 1695, 1699, 1705, 3193, 3265 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 220, 1590, 1819, 2704, 2767 |
| HpySE526I | ACGT | 9 cut(s) | 158, 812, 937, 1147, 1695, 1699, 1705, 3193, 3265 |
| HspAI | GCGC | 4 cut(s) | 2107, 2144, 2705, 2878 |
| KpnI | GGTACC | 1 cut(s) | 969 |
| Ksp22I | TGATCA | 1 cut(s) | 1627 |
| LmnI | GCTCC | 4 cut(s) | 23, 126, 1116, 3187 |
| Lsp1109I | GCAGC | 8 cut(s) | 105, 327, 1108, 1773, 2437, 2867, 2988, 2991 |
| LweI | GCATC | 6 cut(s) | 160, 1622, 1822, 1986, 2130, 2146 |
| MaeI | CTAG | 9 cut(s) | 198, 510, 782, 1421, 1673, 1791, 1919, 2054, 2355 |
| MaeII | ACGT | 9 cut(s) | 158, 812, 937, 1147, 1695, 1699, 1705, 3193, 3265 |
| MfeI | CAATTG | 2 cut(s) | 600, 3103 |
| MflI | RGATCY | 7 cut(s) | 778, 877, 1060, 1330, 1357, 2023, 2347 |
| MhlI | GDGCHC | 2 cut(s) | 1113, 1758 |
| MlyI | GAGTC | 3 cut(s) | 515, 672, 1556 |
| MmeI | TCCRAC | 5 cut(s) | 237, 1378, 1530, 2299, 2322 |
| Mph1103I | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |
| MroXI | GAANNNNTTC | 4 cut(s) | 789, 2613, 2659, 2829 |
| MslI | CAYNNNNRTG | 1 cut(s) | 246 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspCI | CTTAAG | 1 cut(s) | 2936 |
| MspI | CCGG | 2 cut(s) | 77, 1232 |
| MspR9I | CCNGG | 2 cut(s) | 385, 2334 |
| MunI | CAATTG | 2 cut(s) | 600, 3103 |
| Mva1269I | GAATGC | 4 cut(s) | 1048, 1615, 2549, 2707 |
| MvaI | CCWGG | 2 cut(s) | 385, 2334 |
| MvnI | CGCG | 1 cut(s) | 2109 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 220, 1590, 1819, 2704, 2767 |
| NdeI | CATATG | 1 cut(s) | 1196 |
| NlaIV | GGNNCC | 3 cut(s) | 381, 967, 1112 |
| NmuCI | GTSAC | 6 cut(s) | 571, 751, 928, 2149, 2228, 2476 |
| NsbI | TGCGCA | 1 cut(s) | 2145 |
| NsiI | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |
| NspI | RCATGY | 4 cut(s) | 957, 1448, 2150, 2770 |
| NspV | TTCGAA | 2 cut(s) | 2741, 3044 |
| PacI | TTAATTAA | 2 cut(s) | 1848, 2466 |
| PaeI | GCATGC | 1 cut(s) | 957 |
| PaeR7I | CTCGAG | 2 cut(s) | 335, 2300 |
| PagI | TCATGA | 1 cut(s) | 358 |
| PaqCI | CACCTGC | 1 cut(s) | 1037 |
| PciI | ACATGT | 1 cut(s) | 1444 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 155, 651, 2515 |
| PctI | GAATGC | 4 cut(s) | 1048, 1615, 2549, 2707 |
| PdmI | GAANNNNTTC | 4 cut(s) | 789, 2613, 2659, 2829 |
| PfeI | GAWTC | 5 cut(s) | 305, 2305, 2609, 2825, 2981 |
| Pfl23II | CGTACG | 1 cut(s) | 1696 |
| PflFI | GACNNNGTC | 2 cut(s) | 662, 2597 |
| PleI | GAGTC | 3 cut(s) | 514, 671, 1556 |
| PmaCI | CACGTG | 1 cut(s) | 938 |
| PmlI | CACGTG | 1 cut(s) | 938 |
| PpsI | GAGTC | 3 cut(s) | 514, 671, 1556 |
| Ppu21I | YACGTR | 3 cut(s) | 938, 1696, 1700 |
| PscI | ACATGT | 1 cut(s) | 1444 |
| PshAI | GACNNNNGTC | 1 cut(s) | 372 |
| PshBI | ATTAAT | 4 cut(s) | 1844, 1949, 2462, 2466 |
| Psp1406I | AACGTT | 1 cut(s) | 3193 |
| Psp6I | CCWGG | 2 cut(s) | 383, 2332 |
| PspCI | CACGTG | 1 cut(s) | 938 |
| PspFI | CCCAGC | 1 cut(s) | 113 |
| PspGI | CCWGG | 2 cut(s) | 383, 2332 |
| PspLI | CGTACG | 1 cut(s) | 1696 |
| PspN4I | GGNNCC | 3 cut(s) | 381, 967, 1112 |
| PspPI | GGNCC | 1 cut(s) | 3222 |
| PspXI | VCTCGAGB | 1 cut(s) | 335 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1894 |
| PsuI | RGATCY | 7 cut(s) | 778, 877, 1060, 1330, 1357, 2023, 2347 |
| PsyI | GACNNNGTC | 2 cut(s) | 662, 2597 |
| RseI | CAYNNNNRTG | 1 cut(s) | 246 |
| SalI | GTCGAC | 1 cut(s) | 2951 |
| Sau96I | GGNCC | 1 cut(s) | 3222 |
| ScaI | AGTACT | 2 cut(s) | 1409, 1677 |
| SchI | GAGTC | 3 cut(s) | 515, 672, 1556 |
| ScrFI | CCNGG | 2 cut(s) | 385, 2334 |
| SduI | GDGCHC | 2 cut(s) | 1113, 1758 |
| SfaNI | GCATC | 6 cut(s) | 160, 1622, 1822, 1986, 2130, 2146 |
| Sfr274I | CTCGAG | 2 cut(s) | 335, 2300 |
| SfuI | TTCGAA | 2 cut(s) | 2741, 3044 |
| SlaI | CTCGAG | 2 cut(s) | 335, 2300 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 246 |
| SmlI | CTYRAG | 7 cut(s) | 335, 883, 1305, 2300, 2447, 2936, 2956 |
| SmoI | CTYRAG | 7 cut(s) | 335, 883, 1305, 2300, 2447, 2936, 2956 |
| SnaBI | TACGTA | 1 cut(s) | 1696 |
| SphI | GCATGC | 1 cut(s) | 957 |
| SsiI | CCGC | 8 cut(s) | 111, 319, 563, 749, 2109, 2319, 2394, 2759 |
| SspI | AATATT | 3 cut(s) | 1162, 1182, 2140 |
| SspMI | CTAG | 9 cut(s) | 198, 510, 782, 1421, 1673, 1791, 1919, 2054, 2355 |
| StyD4I | CCNGG | 2 cut(s) | 383, 2332 |
| StyI | CCWWGG | 2 cut(s) | 2003, 2160 |
| TaaI | ACNGT | 8 cut(s) | 859, 1292, 1387, 1640, 1680, 2482, 2903, 3038 |
| TaiI | ACGT | 9 cut(s) | 161, 815, 940, 1150, 1698, 1702, 1708, 3196, 3268 |
| TatI | WGTACW | 4 cut(s) | 1407, 1675, 2868, 3243 |
| TauI | GCSGC | 3 cut(s) | 321, 2322, 2761 |
| TfiI | GAWTC | 5 cut(s) | 305, 2305, 2609, 2825, 2981 |
| TscAI | CASTG | 5 cut(s) | 1374, 2071, 2595, 2915, 3125 |
| TseFI | GTSAC | 6 cut(s) | 571, 751, 928, 2149, 2228, 2476 |
| TseI | GCWGC | 8 cut(s) | 118, 315, 1121, 1786, 2425, 2880, 3001, 3004 |
| Tsp45I | GTSAC | 6 cut(s) | 571, 751, 928, 2149, 2228, 2476 |
| TspGWI | ACGGA | 2 cut(s) | 602, 1053 |
| TspRI | CASTG | 5 cut(s) | 1374, 2071, 2595, 2915, 3125 |
| Tth111I | GACNNNGTC | 2 cut(s) | 662, 2597 |
| Vha464I | CTTAAG | 1 cut(s) | 2936 |
| VspI | ATTAAT | 4 cut(s) | 1844, 1949, 2462, 2466 |
| XapI | RAATTY | 5 cut(s) | 710, 827, 862, 2671, 3096 |
| XbaI | TCTAGA | 2 cut(s) | 197, 781 |
| XceI | RCATGY | 4 cut(s) | 957, 1448, 2150, 2770 |
| XhoI | CTCGAG | 2 cut(s) | 335, 2300 |
| XmiI | GTMKAC | 4 cut(s) | 648, 979, 2917, 2952 |
| XmnI | GAANNNNTTC | 4 cut(s) | 789, 2613, 2659, 2829 |
| XspI | CTAG | 9 cut(s) | 198, 510, 782, 1421, 1673, 1791, 1919, 2054, 2355 |
| ZrmI | AGTACT | 2 cut(s) | 1409, 1677 |
| Zsp2I | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |