Rorug01G0023400

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
3858631 .. 3862402
3772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0023400.1

Sequence Viewer

Length: 609 bp
ATGGATTCAATTTCTCACAGTTTCAATGTGGTTGCAGGAATCACTGTTGCAAATTCTGCCCAGACAAGGAATGAATGTTTAAAGATAATAGTAACAATTCGCACAGCAAGAATTCAAGATATCCAACCCTTAGAAAACGACCTCCAAATCAAAGTGCAGGAGGGAGTTGGTGATCTCTGGACTGGAATTGGACCTAACATTGCATGTAATGCTATCATTAATGCTGCTGAACTAGCCAGTTATGATCAAGTGAAGCAGACGCTTTTGAAAATTCCCGGGTTTAAGGACAATGTTGTCACTCATCTTTTTGCTGGTCTGGGGGCAGGTATTTTTGCCGTCTGCATTGGCTCACCAGTTGATGTGGTTAAGTCAAGAATGATGGGAGATTCTTCTGCTTACAAAAATAGGATCGATTGCTTCGTTAAAACTTTGAAGAATGATGGACCTTTGGCCTTTTATAAGGGCTTCATCCCAAATTTTGGACGGCTAGGATCTTGGAATGTACAAGATTCGACGCCTTCGCTTTTTATATTCTTCAGCCTTTTGAGCGTCTGGTCTGTGCGCTGGTTTTCTATTTTCACGTTTTTAGCAGTCCGAACTGCAGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

202

Amino Acids

22.1

Weight (kDa)

8.72

Isoelectric Point (pI)

30.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 49 - 90 4.7e-06 Mitochondrial carrier protein
Mito_carr PF00153 96 - 164 1.5e-17 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 459
AasI GACNNNNNNGTC 1 cut(s) 293
Acc36I ACCTGC 1 cut(s) 314
AccB7I CCANNNNNTGG 1 cut(s) 479
AclWI GGATC 2 cut(s) 416, 499
AcsI RAATTY 4 cut(s) 52, 111, 270, 475
AcuI CTGAAG 1 cut(s) 520
AcyI GRCGYC 1 cut(s) 515
AfaI GTAC 1 cut(s) 504
AfiI CCNNNNNNNGG 2 cut(s) 66, 479
AgsI TTSAA 5 cut(s) 9, 25, 116, 268, 433
AluBI AGCT 1 cut(s) 605
AluI AGCT 1 cut(s) 605
AlwI GGATC 2 cut(s) 416, 499
Ama87I CYCGRG 1 cut(s) 275
AoxI GGCC 1 cut(s) 450
ApeKI GCWGC 2 cut(s) 224, 602
ApoI RAATTY 4 cut(s) 52, 111, 270, 475
AseI ATTAAT 1 cut(s) 219
AspLEI GCGC 1 cut(s) 564
AspS9I GGNCC 2 cut(s) 191, 443
AsuC2I CCSGG 2 cut(s) 276, 277
AsuHPI GGTGA 2 cut(s) 182, 342
AvaI CYCGRG 1 cut(s) 275
AvaII GGWCC 2 cut(s) 191, 443
BbvI GCAGC 1 cut(s) 211
BccI CCATC 2 cut(s) 373, 434
BceAI ACGGC 2 cut(s) 320, 500
BclI TGATCA 1 cut(s) 244
BcnI CCSGG 2 cut(s) 276, 277
BfaI CTAG 2 cut(s) 233, 488
BfmI CTRYAG 1 cut(s) 600
BfuAI ACCTGC 1 cut(s) 314
BisI GCNGC 2 cut(s) 225, 603
BlsI GCNGC 2 cut(s) 226, 604
Bme1390I CCNGG 2 cut(s) 276, 277
Bme18I GGWCC 2 cut(s) 191, 443
BmeT110I CYCGRG 1 cut(s) 275
BmgT120I GGNCC 2 cut(s) 191, 443
BmrFI CCNGG 2 cut(s) 276, 277
BpuMI CCSGG 2 cut(s) 276, 277
Bsa29I ATCGAT 1 cut(s) 411
BsaHI GRCGYC 1 cut(s) 515
BsaJI CCNNGG 1 cut(s) 275
Bsc4I CCNNNNNNNGG 2 cut(s) 66, 479
Bse1I ACTGG 3 cut(s) 187, 237, 353
Bse3DI GCAATG 1 cut(s) 198
BseCI ATCGAT 1 cut(s) 411
BseDI CCNNGG 1 cut(s) 275
BseGI GGATG 1 cut(s) 468
BseLI CCNNNNNNNGG 2 cut(s) 66, 479
BseMI GCAATG 1 cut(s) 198
BseNI ACTGG 3 cut(s) 187, 237, 353
BseXI GCAGC 1 cut(s) 211
BsgI GTGCAG 1 cut(s) 176
BshFI GGCC 1 cut(s) 452
BshVI ATCGAT 1 cut(s) 411
BsiHKCI CYCGRG 1 cut(s) 275
BsiSI CCGG 1 cut(s) 276
BslI CCNNNNNNNGG 2 cut(s) 66, 479
BsnI GGCC 1 cut(s) 452
BsoBI CYCGRG 1 cut(s) 275
Bsp1407I TGTACA 1 cut(s) 502
Bsp143I GATC 4 cut(s) 172, 244, 408, 491
BspANI GGCC 1 cut(s) 452
BspDI ATCGAT 1 cut(s) 411
BspMAI CTGCAG 1 cut(s) 604
BspMI ACCTGC 1 cut(s) 314
BspPI GGATC 2 cut(s) 416, 499
BsrDI GCAATG 1 cut(s) 198
BsrGI TGTACA 1 cut(s) 502
BsrI ACTGG 3 cut(s) 187, 237, 353
BssECI CCNNGG 1 cut(s) 275
BssMI GATC 4 cut(s) 172, 244, 408, 491
BssNI GRCGYC 1 cut(s) 515
Bst4CI ACNGT 2 cut(s) 20, 46
BstACI GRCGYC 1 cut(s) 515
BstAPI GCANNNNNTGC 2 cut(s) 56, 209
BstAUI TGTACA 1 cut(s) 502
BstDEI CTNAG 2 cut(s) 130, 606
BstF5I GGATG 1 cut(s) 468
BstHHI GCGC 1 cut(s) 564
BstKTI GATC 4 cut(s) 175, 247, 411, 494
BstMBI GATC 4 cut(s) 172, 244, 408, 491
BstMWI GCNNNNNNNGC 4 cut(s) 56, 209, 233, 546
BstNSI RCATGY 1 cut(s) 207
BstSCI CCNGG 2 cut(s) 274, 275
BstSFI CTRYAG 1 cut(s) 600
BstV1I GCAGC 1 cut(s) 211
BstX2I RGATCY 1 cut(s) 491
BstYI RGATCY 1 cut(s) 491
Bsu15I ATCGAT 1 cut(s) 411
BsuRI GGCC 1 cut(s) 452
BsuTUI ATCGAT 1 cut(s) 411
BtsCI GGATG 1 cut(s) 468
BtsIMutI CAGTG 1 cut(s) 42
BveI ACCTGC 1 cut(s) 314
CfoI GCGC 1 cut(s) 564
Cfr13I GGNCC 2 cut(s) 191, 443
Cfr9I CCCGGG 1 cut(s) 275
ClaI ATCGAT 1 cut(s) 411
CseI GACGC 3 cut(s) 268, 523, 538
Csp6I GTAC 1 cut(s) 503
CviAII CATG 1 cut(s) 204
CviJI RGCY 7 cut(s) 236, 348, 452, 465, 487, 540, 605
CviKI_1 RGCY 7 cut(s) 236, 348, 452, 465, 487, 540, 605
CviQI GTAC 1 cut(s) 503
DdeI CTNAG 2 cut(s) 130, 606
DpnI GATC 4 cut(s) 174, 246, 410, 493
DpnII GATC 4 cut(s) 172, 244, 408, 491
DraI TTTAAA 1 cut(s) 81
DrdI GACNNNNNNGTC 1 cut(s) 293
DseDI GACNNNNNNGTC 1 cut(s) 293
Eco32I GATATC 1 cut(s) 121
Eco47I GGWCC 2 cut(s) 191, 443
Eco57I CTGAAG 1 cut(s) 520
Eco88I CYCGRG 1 cut(s) 275
EcoRI GAATTC 1 cut(s) 111
EcoRV GATATC 1 cut(s) 121
FaeI CATG 1 cut(s) 207
FaiI YATR 4 cut(s) 205, 243, 459, 530
FatI CATG 1 cut(s) 203
FbaI TGATCA 1 cut(s) 244
Fnu4HI GCNGC 2 cut(s) 225, 603
FokI GGATG 1 cut(s) 455
Fsp4HI GCNGC 2 cut(s) 225, 603
FspBI CTAG 2 cut(s) 233, 488
GlaI GCGC 1 cut(s) 563
GluI GCNGC 2 cut(s) 225, 603
HaeIII GGCC 1 cut(s) 452
HapII CCGG 1 cut(s) 276
HgaI GACGC 3 cut(s) 268, 523, 538
HhaI GCGC 1 cut(s) 564
Hin1I GRCGYC 1 cut(s) 515
Hin1II CATG 1 cut(s) 207
Hin6I GCGC 1 cut(s) 562
HinP1I GCGC 1 cut(s) 562
HinfI GANTC 4 cut(s) 5, 39, 386, 509
HpaII CCGG 1 cut(s) 276
HphI GGTGA 2 cut(s) 182, 342
Hpy188I TCNGA 1 cut(s) 596
Hpy188III TCNNGA 3 cut(s) 116, 178, 372
Hpy99I CGWCG 1 cut(s) 517
HpyAV CCTTC 1 cut(s) 528
HpyCH4III ACNGT 2 cut(s) 20, 46
HpyCH4IV ACGT 1 cut(s) 581
HpyCH4V TGCA 6 cut(s) 35, 50, 157, 203, 342, 602
HpyF10VI GCNNNNNNNGC 4 cut(s) 56, 209, 233, 546
HpyF3I CTNAG 2 cut(s) 130, 606
HpySE526I ACGT 1 cut(s) 581
Hsp92I GRCGYC 1 cut(s) 515
Hsp92II CATG 1 cut(s) 207
HspAI GCGC 1 cut(s) 562
Ksp22I TGATCA 1 cut(s) 244
Kzo9I GATC 4 cut(s) 172, 244, 408, 491
Lsp1109I GCAGC 1 cut(s) 211
MaeI CTAG 2 cut(s) 233, 488
MaeII ACGT 1 cut(s) 581
MaeIII GTNAC 2 cut(s) 91, 295
MalI GATC 4 cut(s) 174, 246, 410, 493
MboI GATC 4 cut(s) 172, 244, 408, 491
MboII GAAGA 3 cut(s) 381, 445, 526
MflI RGATCY 1 cut(s) 491
MluCI AATT 7 cut(s) 9, 52, 96, 111, 186, 270, 475
MmeI TCCRAC 1 cut(s) 148
MnlI CCTC 2 cut(s) 152, 154
MseI TTAA 5 cut(s) 80, 219, 282, 366, 423
MspI CCGG 1 cut(s) 276
MspR9I CCNGG 2 cut(s) 276, 277
MwoI GCNNNNNNNGC 4 cut(s) 56, 209, 233, 546
NciI CCSGG 2 cut(s) 276, 277
NdeII GATC 4 cut(s) 172, 244, 408, 491
NlaIII CATG 1 cut(s) 207
NmuCI GTSAC 1 cut(s) 295
NspI RCATGY 1 cut(s) 207
PcsI WCGNNNNNNNCGW 1 cut(s) 417
PfeI GAWTC 4 cut(s) 5, 39, 386, 509
PflMI CCANNNNNTGG 1 cut(s) 479
PkrI GCNGC 2 cut(s) 226, 604
PshBI ATTAAT 1 cut(s) 219
PsiI TTATAA 1 cut(s) 459
PspPI GGNCC 2 cut(s) 191, 443
PstI CTGCAG 1 cut(s) 604
PsuI RGATCY 1 cut(s) 491
RsaI GTAC 1 cut(s) 504
RsaNI GTAC 1 cut(s) 503
SaqAI TTAA 5 cut(s) 80, 219, 282, 366, 423
SatI GCNGC 2 cut(s) 225, 603
Sau3AI GATC 4 cut(s) 172, 244, 408, 491
Sau96I GGNCC 2 cut(s) 191, 443
ScrFI CCNGG 2 cut(s) 276, 277
SetI ASST 6 cut(s) 144, 196, 328, 448, 584, 607
SfcI CTRYAG 1 cut(s) 600
SinI GGWCC 2 cut(s) 191, 443
SmaI CCCGGG 1 cut(s) 277
Sse9I AATT 7 cut(s) 9, 52, 96, 111, 186, 270, 475
SspMI CTAG 2 cut(s) 233, 488
StyD4I CCNGG 2 cut(s) 274, 275
TaaI ACNGT 2 cut(s) 20, 46
TaiI ACGT 1 cut(s) 584
TaqI TCGA 2 cut(s) 411, 512
TasI AATT 7 cut(s) 9, 52, 96, 111, 186, 270, 475
TatI WGTACW 1 cut(s) 502
TfiI GAWTC 4 cut(s) 5, 39, 386, 509
Tru1I TTAA 5 cut(s) 80, 219, 282, 366, 423
Tru9I TTAA 5 cut(s) 80, 219, 282, 366, 423
TscAI CASTG 1 cut(s) 49
TseFI GTSAC 1 cut(s) 295
TseI GCWGC 2 cut(s) 224, 602
Tsp45I GTSAC 1 cut(s) 295
TspDTI ATGAA 2 cut(s) 87, 457
TspMI CCCGGG 1 cut(s) 275
TspRI CASTG 1 cut(s) 49
Van91I CCANNNNNTGG 1 cut(s) 479
VpaK11BI GGWCC 2 cut(s) 191, 443
VspI ATTAAT 1 cut(s) 219
XapI RAATTY 4 cut(s) 52, 111, 270, 475
XceI RCATGY 1 cut(s) 207
XmaI CCCGGG 1 cut(s) 275
XspI CTAG 2 cut(s) 233, 488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.