MD00G1203600.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
49000383 .. 49003593
3211 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1203600.v1.1.491

Sequence Viewer

Length: 2337 bp
ATGCATGATCTCATCAATGACTTGGCTATGTTTGTGTCTGGAGAGTTTTGTTTCAGGTTCGATCAGAAAAATTCACATGAAGTTCCTAAAAGAGTTCGCCACTTGTCGTATATGAGAGGAAACTTTGATACATCTCTAAAATTTAAGCCATTAAAAGGAGTTGAGTGTTTGCGAACCTTCTTTCCAGTGTCTTTAGCACCATATGATAGCCGTGATCGTGGATATGTAAGCAATAAGGTTCTAGATGATTTACTGCCAGCACAAAAATGTTTACGGGCTTTTTCATTGTCAAGATATCAAAATATCAATCACTTACCTAGTTCCATTGGTAACCACATCCACTTGCGCTATGTTGATCTCTCTTATACGGCAATTAAAAGGTTACCAGATACAGTGTGCACTCTCTACAATTTACAGACTCTGTTGTTGTTAGGTTGTTCTTCTCTTGTTGAATTGCCTGCAGACATGTGGAAATTGATTCATTTGCGTCATCTTGAAATTAGTGGAACTAACATAAAAGAGATGCCTACGCATATGGGTAGACTAAAAAGTTTGAGAACGCTGACTGTTTTTATGTTGGGGAAATCTGTTGGATCAAGCATTGCAGAATTGAGGGAGTTGTTGCACCTTCGAGGAAAAATTTCAATCTTGAATCTGCAAAATGTAGCTGGTGTTATTGATGCCTTGCTGAAGGATAAGAAAGATCTCAATGATGTAGAGTTGGCATGGGGTCATGAAGTTTCCAATGATTTTGTGAAAGAGAGACGTGTACTTGAAAGACTACAACCTTCGGTAAATTTGGCGAAACTAACCATCAAGTTTTATGGTGGAACCACTTTCCCCAATTGGGTGGGAGACTCGTCTTTCTCCAACTTACAAGTGATGCGTCTCGGAGCTTGTAGTAATTGTAGTTCTCTGCCACCAGTTGGTCAGCTACCTGCTCTCAAAGAGCTCTACATACAAAGGATGGAATTGGTTACGAGTGTTGGTGTTGAGTTGTACGGTGGAAATCAACCATTTCGATCTTTAGAGAAGCTCGAGTTCAGGGATATGCCAGAGTGGAAGGAATGGCTGCCTAGTCCAAGTGGAGGTGAAAGTCCAAACTTTCCTCAGCTTAAGGAGCTGAAGTTAATTTGGTGTCAGAAGCTGAGAGGAAACTTGCCCACTCATCTTCCTTCCTTGAAAATACTTGAGGTCTGCGGATGTGAGGTTCTACAAGGAAACAGGGCCAGTAATACCCTGAACATGGAATCCTTACGACGATCTCTTGAACAACTGACAATAAGTAGATGCCCGCGTCTCTCATTGTCACTAGAGTCGACGGAGACGCTGCAGTCGCTTCAGAAGTTTAATATTTCTTATCATGGTAGGAGAGAGTGGTCTTCGCAAATGGTGCACAACAGCAATCGTCTTCAACATTTGAGTATTTCTAACTGTTCCTCACTCTTGTCGTTCCCTACAAATGGTCTGCCCACCACGCTGACATCACTCCGTATAGATGACTGCAGAAAATTAGAATTCCTATCACGTGAGATGATGGCCGAATTGACTTCCCTTCAGACTTTGGATCTTGTACAGAGCTGTGATTCTCTGAGGTCGTTCCCGTTGGGCATTTTCCCCAAACTTTCATCCCTTTATATATGGGGTTGTCAGAATCTGGAATCCTTTTCTGTTGAAGGAGGAGCAAATGAAAATCTCAGCCATCTCGACTCCCTGACTATTGTGACATGCCCAAACCTTGTCTCTTTTCCCGACGGAGGATTGCCCACTCCGAACCTGACTTACTTTTCAGTCTTGGAGTGCGATAATTTGAAGTTTTTGCCGGACCGAATGCACACCCTCACCGCCCTTCAATTTTTGTGGATACAAAGTCTTCCAAATCTGGTGTCATTTGCACAAGGGGGTTTGCCTCCCAACCTACAAACATTTTGGATCAAAAATTGTGAGAGACCGAGGCCTTCAGCGGAGTGGGGATTGCAAGGACTTGTCTCTCTCCGACGATTTTGGATTGAAGGAAACAAGGATCTGTTGGAGACGTTGCTCGAGGAACAGATGCTCCCTGCCAGTCTTCACACTCTCAAAATCTCTTCTGTATCGAATCTGAAATCTTTGGACGGCAAGGGTCTTGAGCACCTCACTTCTCTTCAAGAGCTACGAATTTTAGGGTGCGAGAGTCTCGAAATCCTTCCAAAAGACGGTTTTCTGGCATCTCTTTCTTTCCTGGGCATCTGGCATTGTCCTTCTTTGAAGAAGAGGTACGAGAAGAAGAAAGGAAAAGATTGGAAAAACATAGCTCGCATTCCTTGCATACGGATAGATGATGAAATCACTATATGA

Protein Analysis

779

Amino Acids

88.17

Weight (kDa)

8.59

Isoelectric Point (pI)

50.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 89 - 399 3.2e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 201 - 323 2.5e-33 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1333
Acc36I ACCTGC 1 cut(s) 946
AccB7I CCANNNNNTGG 1 cut(s) 926
AccI GTMKAC 2 cut(s) 541, 1319
AccII CGCG 1 cut(s) 1297
AciI CCGC 4 cut(s) 1200, 1295, 1845, 1964
AclWI GGATC 4 cut(s) 601, 1575, 1940, 2031
AcoI YGGCCR 1 cut(s) 1539
AcsI RAATTY 6 cut(s) 70, 140, 639, 796, 1517, 2157
AcuI CTGAAG 5 cut(s) 710, 1145, 1325, 1541, 1944
AcvI CACGTG 1 cut(s) 1529
AfaI GTAC 4 cut(s) 771, 1001, 1575, 2258
AfiI CCNNNNNNNGG 8 cut(s) 155, 847, 926, 1088, 1246, 1463, 1757, 2195
AflII CTTAAG 1 cut(s) 1115
AflIII ACRYGT 2 cut(s) 465, 766
AjiI CACGTC 1 cut(s) 767
AjnI CCWGG 1 cut(s) 2220
AloI GAACNNNNNNTCC 8 cut(s) 166, 198, 1194, 1226, 1235, 1267, 2040, 2072
Alw21I GWGCWC 4 cut(s) 401, 954, 1398, 2133
Alw44I GTGCAC 2 cut(s) 397, 1394
AlwI GGATC 4 cut(s) 601, 1575, 1940, 2031
AlwNI CAGNNNCTG 3 cut(s) 421, 1147, 1657
Ama87I CYCGRG 2 cut(s) 1037, 2042
AoxI GGCC 3 cut(s) 1227, 1539, 1955
ApaLI GTGCAC 2 cut(s) 397, 1394
ApeKI GCWGC 2 cut(s) 1072, 1330
ApoI RAATTY 6 cut(s) 70, 140, 639, 796, 1517, 2157
ArsI GACNNNNNNTTYG 2 cut(s) 1871, 1903
Asp700I GAANNNNTTC 2 cut(s) 640, 2184
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 2 cut(s) 1227, 1825
AsuHPI GGTGA 2 cut(s) 1103, 1834
AvaI CYCGRG 2 cut(s) 1037, 2042
AvaII GGWCC 1 cut(s) 1825
BaeGI GKGCMC 2 cut(s) 401, 1398
BanII GRGCYC 1 cut(s) 954
BarI GAAGNNNNNNTAC 2 cut(s) 2240, 2272
BbrPI CACGTG 1 cut(s) 1529
BbsI GAAGAC 4 cut(s) 1374, 1403, 1865, 2060
Bbv12I GWGCWC 4 cut(s) 401, 954, 1398, 2133
BbvCI CCTCAGC 1 cut(s) 1110
BbvI GCAGC 2 cut(s) 1059, 1317
BccI CCATC 4 cut(s) 821, 961, 1531, 1710
BceAI ACGGC 3 cut(s) 195, 384, 2131
BciT130I CCWGG 1 cut(s) 2222
BciVI GTATCC 1 cut(s) 1857
BfaI CTAG 4 cut(s) 242, 318, 1077, 1313
BfmI CTRYAG 3 cut(s) 459, 1331, 1504
BfrI CTTAAG 1 cut(s) 1115
BfuAI ACCTGC 1 cut(s) 946
BfuI GTATCC 1 cut(s) 1857
BglII AGATCT 1 cut(s) 703
BisI GCNGC 2 cut(s) 1073, 1331
BlsI GCNGC 2 cut(s) 1074, 1332
Bme1390I CCNGG 1 cut(s) 2222
Bme18I GGWCC 1 cut(s) 1825
BmeT110I CYCGRG 2 cut(s) 1037, 2042
BmgBI CACGTC 1 cut(s) 767
BmgT120I GGNCC 2 cut(s) 1227, 1825
BmiI GGNNCC 1 cut(s) 832
BmrFI CCNGG 1 cut(s) 2222
BmsI GCATC 7 cut(s) 513, 670, 873, 1280, 2043, 2216, 2235
BpiI GAAGAC 4 cut(s) 1374, 1403, 1865, 2060
BpmI CTGGAG 1 cut(s) 60
Bpu10I CCTNAGC 1 cut(s) 1110
BpuEI CTTGAG 2 cut(s) 1211, 2147
BsaAI YACGTR 1 cut(s) 1529
BsaI GGTCTC 1 cut(s) 1942
BsaJI CCNNGG 2 cut(s) 1952, 2221
BsaXI ACNNNNNCTCC 4 cut(s) 1112, 1142, 2040, 2070
Bsc4I CCNNNNNNNGG 8 cut(s) 155, 847, 926, 1088, 1246, 1463, 1757, 2195
Bse1I ACTGG 4 cut(s) 185, 923, 1230, 2064
Bse3DI GCAATG 1 cut(s) 600
BseBI CCWGG 1 cut(s) 2222
BseDI CCNNGG 2 cut(s) 1952, 2221
BseGI GGATG 4 cut(s) 336, 972, 1208, 1628
BseLI CCNNNNNNNGG 8 cut(s) 155, 847, 926, 1088, 1246, 1463, 1757, 2195
BseMI GCAATG 1 cut(s) 600
BseMII CTCAG 4 cut(s) 1124, 1139, 1583, 1711
BseNI ACTGG 4 cut(s) 185, 923, 1230, 2064
BseRI GAGGAG 1 cut(s) 1695
BseSI GKGCMC 2 cut(s) 401, 1398
BseXI GCAGC 2 cut(s) 1059, 1317
Bsh1236I CGCG 1 cut(s) 1297
BshFI GGCC 3 cut(s) 1229, 1541, 1957
BsiHKAI GWGCWC 4 cut(s) 401, 954, 1398, 2133
BsiHKCI CYCGRG 2 cut(s) 1037, 2042
BsiSI CCGG 1 cut(s) 1823
BslI CCNNNNNNNGG 8 cut(s) 155, 847, 926, 1088, 1246, 1463, 1757, 2195
BsmBI CGTCTC 5 cut(s) 757, 893, 1304, 1319, 2027
BsmI GAATGC 2 cut(s) 1836, 2298
BsnI GGCC 3 cut(s) 1229, 1541, 1957
Bso31I GGTCTC 1 cut(s) 1942
BsoBI CYCGRG 2 cut(s) 1037, 2042
Bsp1286I GDGCHC 4 cut(s) 401, 954, 1398, 2133
Bsp1407I TGTACA 1 cut(s) 1573
BspACI CCGC 4 cut(s) 1200, 1295, 1845, 1964
BspANI GGCC 3 cut(s) 1229, 1541, 1957
BspCNI CTCAG 4 cut(s) 1123, 1140, 1584, 1710
BspFNI CGCG 1 cut(s) 1297
BspHI TCATGA 1 cut(s) 733
BspLI GGNNCC 1 cut(s) 832
BspMAI CTGCAG 3 cut(s) 463, 1335, 1508
BspMI ACCTGC 1 cut(s) 946
BspPI GGATC 4 cut(s) 601, 1575, 1940, 2031
BspTI CTTAAG 1 cut(s) 1115
BspTNI GGTCTC 1 cut(s) 1942
BsrDI GCAATG 1 cut(s) 600
BsrGI TGTACA 1 cut(s) 1573
BsrI ACTGG 4 cut(s) 185, 923, 1230, 2064
BssECI CCNNGG 2 cut(s) 1952, 2221
Bst2UI CCWGG 1 cut(s) 2222
Bst4CI ACNGT 5 cut(s) 394, 568, 1004, 1436, 2198
Bst6I CTCTTC 3 cut(s) 2092, 2148, 2246
BstAFI CTTAAG 1 cut(s) 1115
BstAPI GCANNNNNTGC 2 cut(s) 1393, 2304
BstAUI TGTACA 1 cut(s) 1573
BstBAI YACGTR 1 cut(s) 1529
BstC8I GCNNGC 4 cut(s) 258, 459, 1295, 2296
BstDEI CTNAG 4 cut(s) 1110, 1148, 1592, 1697
BstEII GGTNACC 2 cut(s) 329, 381
BstF5I GGATG 4 cut(s) 336, 972, 1208, 1628
BstFNI CGCG 1 cut(s) 1297
BstHHI GCGC 1 cut(s) 348
BstMWI GCNNNNNNNGC 5 cut(s) 1120, 1336, 1393, 1477, 2304
BstNI CCWGG 1 cut(s) 2222
BstNSI RCATGY 2 cut(s) 469, 1731
BstPI GGTNACC 2 cut(s) 329, 381
BstSCI CCNGG 1 cut(s) 2220
BstSFI CTRYAG 3 cut(s) 459, 1331, 1504
BstSLI GKGCMC 2 cut(s) 401, 1398
BstUI CGCG 1 cut(s) 1297
BstV1I GCAGC 2 cut(s) 1059, 1317
BstV2I GAAGAC 4 cut(s) 1374, 1403, 1865, 2060
BstX2I RGATCY 3 cut(s) 703, 1567, 2023
BstXI CCANNNNNNTGG 1 cut(s) 850
BstYI RGATCY 3 cut(s) 703, 1567, 2023
BsuI GTATCC 1 cut(s) 1857
BsuRI GGCC 3 cut(s) 1229, 1541, 1957
BtrI CACGTC 1 cut(s) 767
BtsCI GGATG 4 cut(s) 336, 972, 1208, 1628
BtsIMutI CAGTG 2 cut(s) 192, 399
BveI ACCTGC 1 cut(s) 946
Cac8I GCNNGC 4 cut(s) 258, 459, 1295, 2296
CaiI CAGNNNCTG 3 cut(s) 421, 1147, 1657
CciI TCATGA 1 cut(s) 733
CfoI GCGC 1 cut(s) 348
Cfr13I GGNCC 2 cut(s) 1227, 1825
CpoI CGGWCCG 1 cut(s) 1825
CseI GACGC 4 cut(s) 476, 875, 1286, 1336
Csp6I GTAC 4 cut(s) 770, 1000, 1574, 2257
CspCI CAANNNNNGTGG 2 cut(s) 1841, 1876
CspI CGGWCCG 1 cut(s) 1825
CviAII CATG 8 cut(s) 5, 77, 466, 726, 734, 1246, 1364, 1728
CviQI GTAC 4 cut(s) 770, 1000, 1574, 2257
DdeI CTNAG 4 cut(s) 1110, 1148, 1592, 1697
DrdI GACNNNNNNGTC 1 cut(s) 1333
DseDI GACNNNNNNGTC 1 cut(s) 1333
EaeI YGGCCR 1 cut(s) 1539
Eam1104I CTCTTC 3 cut(s) 2092, 2148, 2246
EarI CTCTTC 3 cut(s) 2092, 2148, 2246
Ecl136II GAGCTC 1 cut(s) 952
Eco147I AGGCCT 1 cut(s) 1957
Eco24I GRGCYC 1 cut(s) 954
Eco31I GGTCTC 1 cut(s) 1942
Eco32I GATATC 1 cut(s) 296
Eco47I GGWCC 1 cut(s) 1825
Eco53kI GAGCTC 1 cut(s) 952
Eco57I CTGAAG 5 cut(s) 710, 1145, 1325, 1541, 1944
Eco72I CACGTG 1 cut(s) 1529
Eco88I CYCGRG 2 cut(s) 1037, 2042
Eco91I GGTNACC 2 cut(s) 329, 381
EcoICRI GAGCTC 1 cut(s) 952
EcoO65I GGTNACC 2 cut(s) 329, 381
EcoRI GAATTC 1 cut(s) 1517
EcoRII CCWGG 1 cut(s) 2220
EcoRV GATATC 1 cut(s) 296
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 954
Esp3I CGTCTC 5 cut(s) 757, 893, 1304, 1319, 2027
FaeI CATG 8 cut(s) 8, 80, 469, 729, 737, 1249, 1367, 1731
FatI CATG 8 cut(s) 4, 76, 465, 725, 733, 1245, 1363, 1727
FauI CCCGC 1 cut(s) 1302
FauNDI CATATG 2 cut(s) 202, 534
FblI GTMKAC 2 cut(s) 541, 1319
Fnu4HI GCNGC 2 cut(s) 1073, 1331
FokI GGATG 4 cut(s) 323, 979, 1215, 1615
FriOI GRGCYC 1 cut(s) 954
Fsp4HI GCNGC 2 cut(s) 1073, 1331
FspBI CTAG 4 cut(s) 242, 318, 1077, 1313
GlaI GCGC 1 cut(s) 347
GluI GCNGC 2 cut(s) 1073, 1331
GsuI CTGGAG 1 cut(s) 60
HaeIII GGCC 3 cut(s) 1229, 1541, 1957
HapII CCGG 1 cut(s) 1823
HgaI GACGC 4 cut(s) 476, 875, 1286, 1336
HhaI GCGC 1 cut(s) 348
Hin1II CATG 8 cut(s) 8, 80, 469, 729, 737, 1249, 1367, 1731
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HincII GTYRAC 1 cut(s) 1320
HindII GTYRAC 1 cut(s) 1320
HpaII CCGG 1 cut(s) 1823
HphI GGTGA 2 cut(s) 1103, 1834
Hpy166II GTNNAC 6 cut(s) 272, 399, 542, 770, 1320, 1396
Hpy8I GTNNAC 6 cut(s) 272, 399, 542, 770, 1320, 1396
Hpy99I CGWCG 4 cut(s) 1263, 1324, 1757, 2001
HpyCH4III ACNGT 5 cut(s) 394, 568, 1004, 1436, 2198
HpyCH4IV ACGT 3 cut(s) 766, 1528, 2036
HpyF10VI GCNNNNNNNGC 5 cut(s) 1120, 1336, 1393, 1477, 2304
HpyF3I CTNAG 4 cut(s) 1110, 1148, 1592, 1697
HpySE526I ACGT 3 cut(s) 766, 1528, 2036
Hsp92II CATG 8 cut(s) 8, 80, 469, 729, 737, 1249, 1367, 1731
HspAI GCGC 1 cut(s) 346
LmnI GCTCC 4 cut(s) 893, 1120, 1682, 2061
Lsp1109I GCAGC 2 cut(s) 1059, 1317
LweI GCATC 7 cut(s) 513, 670, 873, 1280, 2043, 2216, 2235
MaeI CTAG 4 cut(s) 242, 318, 1077, 1313
MaeII ACGT 3 cut(s) 766, 1528, 2036
MaeIII GTNAC 5 cut(s) 329, 381, 976, 1308, 1723
MfeI CAATTG 1 cut(s) 844
MflI RGATCY 3 cut(s) 703, 1567, 2023
MhlI GDGCHC 4 cut(s) 401, 954, 1398, 2133
MlyI GAGTC 5 cut(s) 412, 851, 1325, 1703, 2182
MmeI TCCRAC 4 cut(s) 571, 894, 2010, 2020
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 640, 2184
MseI TTAA 6 cut(s) 144, 152, 375, 1116, 1130, 1350
MslI CAYNNNNRTG 1 cut(s) 265
MspA1I CMGCKG 1 cut(s) 1964
MspCI CTTAAG 1 cut(s) 1115
MspI CCGG 1 cut(s) 1823
MspR9I CCNGG 1 cut(s) 2222
MunI CAATTG 1 cut(s) 844
Mva1269I GAATGC 2 cut(s) 1836, 2298
MvaI CCWGG 1 cut(s) 2222
MvnI CGCG 1 cut(s) 1297
MwoI GCNNNNNNNGC 5 cut(s) 1120, 1336, 1393, 1477, 2304
NdeI CATATG 2 cut(s) 202, 534
NlaIII CATG 8 cut(s) 8, 80, 469, 729, 737, 1249, 1367, 1731
NlaIV GGNNCC 1 cut(s) 832
NmuCI GTSAC 2 cut(s) 1308, 1723
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 469, 1731
PaeR7I CTCGAG 2 cut(s) 1037, 2042
PagI TCATGA 1 cut(s) 733
PceI AGGCCT 1 cut(s) 1957
PciI ACATGT 1 cut(s) 465
PctI GAATGC 2 cut(s) 1836, 2298
PdmI GAANNNNTTC 2 cut(s) 640, 2184
PfeI GAWTC 7 cut(s) 478, 652, 1250, 1586, 1654, 1661, 2098
PflMI CCANNNNNTGG 1 cut(s) 926
PkrI GCNGC 2 cut(s) 1074, 1332
PleI GAGTC 5 cut(s) 412, 851, 1324, 1703, 2181
PmaCI CACGTG 1 cut(s) 1529
PmlI CACGTG 1 cut(s) 1529
PpsI GAGTC 5 cut(s) 412, 851, 1324, 1703, 2181
Ppu21I YACGTR 1 cut(s) 1529
PscI ACATGT 1 cut(s) 465
Psp124BI GAGCTC 1 cut(s) 954
Psp6I CCWGG 1 cut(s) 2220
PspCI CACGTG 1 cut(s) 1529
PspEI GGTNACC 2 cut(s) 329, 381
PspGI CCWGG 1 cut(s) 2220
PspN4I GGNNCC 1 cut(s) 832
PspPI GGNCC 2 cut(s) 1227, 1825
PspXI VCTCGAGB 2 cut(s) 1037, 2042
PsrI GAACNNNNNNTAC 4 cut(s) 895, 927, 1766, 1798
PstI CTGCAG 3 cut(s) 463, 1335, 1508
PstNI CAGNNNCTG 3 cut(s) 421, 1147, 1657
PsuI RGATCY 3 cut(s) 703, 1567, 2023
RsaI GTAC 4 cut(s) 771, 1001, 1575, 2258
RsaNI GTAC 4 cut(s) 770, 1000, 1574, 2257
RseI CAYNNNNRTG 1 cut(s) 265
Rsr2I CGGWCCG 1 cut(s) 1825
RsrII CGGWCCG 1 cut(s) 1825
SacI GAGCTC 1 cut(s) 954
SalI GTCGAC 1 cut(s) 1318
SaqAI TTAA 6 cut(s) 144, 152, 375, 1116, 1130, 1350
SatI GCNGC 2 cut(s) 1073, 1331
Sau96I GGNCC 2 cut(s) 1227, 1825
SchI GAGTC 5 cut(s) 412, 851, 1325, 1703, 2182
ScrFI CCNGG 1 cut(s) 2222
SduI GDGCHC 4 cut(s) 401, 954, 1398, 2133
SfaNI GCATC 7 cut(s) 513, 670, 873, 1280, 2043, 2216, 2235
SfcI CTRYAG 3 cut(s) 459, 1331, 1504
Sfr274I CTCGAG 2 cut(s) 1037, 2042
SinI GGWCC 1 cut(s) 1825
SlaI CTCGAG 2 cut(s) 1037, 2042
SmiMI CAYNNNNRTG 1 cut(s) 265
SmlI CTYRAG 5 cut(s) 1037, 1115, 1190, 2042, 2126
SmoI CTYRAG 5 cut(s) 1037, 1115, 1190, 2042, 2126
SseBI AGGCCT 1 cut(s) 1957
SsiI CCGC 4 cut(s) 1200, 1295, 1845, 1964
SspI AATATT 1 cut(s) 1354
SspMI CTAG 4 cut(s) 242, 318, 1077, 1313
SstI GAGCTC 1 cut(s) 954
StuI AGGCCT 1 cut(s) 1957
StyD4I CCNGG 1 cut(s) 2220
TaaI ACNGT 5 cut(s) 394, 568, 1004, 1436, 2198
TaiI ACGT 3 cut(s) 769, 1531, 2039
TaqI TCGA 9 cut(s) 60, 631, 1021, 1038, 1319, 1707, 2043, 2096, 2178
TaqII GACCGA 2 cut(s) 1842, 1966
TatI WGTACW 2 cut(s) 769, 1573
TfiI GAWTC 7 cut(s) 478, 652, 1250, 1586, 1654, 1661, 2098
Tru1I TTAA 6 cut(s) 144, 152, 375, 1116, 1130, 1350
Tru9I TTAA 6 cut(s) 144, 152, 375, 1116, 1130, 1350
TscAI CASTG 2 cut(s) 192, 399
TseFI GTSAC 2 cut(s) 1308, 1723
TseI GCWGC 2 cut(s) 1072, 1330
Tsp45I GTSAC 2 cut(s) 1308, 1723
TspDTI ATGAA 7 cut(s) 93, 273, 470, 750, 1617, 1704, 2337
TspGWI ACGGA 4 cut(s) 1337, 1481, 1770, 2326
TspRI CASTG 2 cut(s) 192, 399
Van91I CCANNNNNTGG 1 cut(s) 926
Vha464I CTTAAG 1 cut(s) 1115
VneI GTGCAC 2 cut(s) 397, 1394
VpaK11BI GGWCC 1 cut(s) 1825
XapI RAATTY 6 cut(s) 70, 140, 639, 796, 1517, 2157
XbaI TCTAGA 1 cut(s) 241
XceI RCATGY 2 cut(s) 469, 1731
XhoI CTCGAG 2 cut(s) 1037, 2042
XmiI GTMKAC 2 cut(s) 541, 1319
XmnI GAANNNNTTC 2 cut(s) 640, 2184
XspI CTAG 4 cut(s) 242, 318, 1077, 1313
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.