RchiOBHm_Chr1g0346471

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
38889662 .. 38890840
1179 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57274

Sequence Viewer

Length: 1167 bp
ATGCATGACCTTATCAATGATTTAGCAAGCTTTGTATCCAGAGAATTTTGTCTTAGGTGGGAGGGAAGTGATTCACCCGACATTTTGAGCAGGACTCGTCATTTTTCATATAAGAGATATTATGATCATACTGAGAACATTAGGATATTTGAGGATTTACAGCAAGCTAAATATTTGCGTACCTTTCTGATGAACGTAACTTCAAGCAAAGGATTAGATGAGCTGCTACCAAGATTACAATGTTTAAGAATGCTCAATTTATCAGGGCGTATAGGGGAATTGCCTGATTCTATTAACAACTTGAAGCTTCTTAGGCACTTGGACTTGTCTTACAGTTTCATCAAAAAGTTGCCTGATACAATTTGTACTTTGTATAACTTGCAAGTATTGTTGTTGTCAAACTGTTGGGGCCTTACTGAACTGCCAGCCAACTTGGGAAGATTGATCAACTTGAGCCATCTGGATACTACAGGTATAATGTTAAAAAAGATGCCACCGGATATGGGTAACTTGAAAGACCTCCAGATGCTACCCGAGTTTGTTCTAGACAAAAGTACCGCAGGGGATAATTTGGCAGACTTAAAGAAGCTTCAAAATTTGCGTGGAGGACTTTGTATCTCAAGGCTTGTGCATAGCAGCGGTTTGGAGGCACTGAGGGACAAGAAGTTTCTTAAGGAACTGGTTTTGGATTATTGGAGAGGATGGGATGTAAGTGAAGAAGAAGCAGAGTCTTGCGATTTGGTGGAGGCAAAATGGGATTCAAGTGAAAAAGGCAATAATACTGTAGAAGAAAGAGAAGTGCTTGAGAAGCTCCAACCTCACCTGAACCTGGAAAGGCTTACAATTAAAAGTTATGGAGGCAAAATGTTTCCAGGTTGGTCAGAATATTATTCTTCCTCTGCTCTTGTTTCTCTTAAACTTGTTAATTGTCAGAATTGTATCTCCTTGCCACCATTGGGACAGCTACCTTCCCTCAGAGAGCTTTTTATTTCTGGGTTGAGTGGGTGGCAAGAATGGTCTGATGTTGGAGGTGACAATAATGAAGGCGGGGTTTTTTCTAATCTTGTTCAACTTGAAGTATATGAGTGTCCCAATCTTACCGGGAGATTAGCTCGAATTCGAATGTTTTCCGGAAGATGGATTCCCGTCAAAGTTAAAATCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

388

Amino Acids

44.32

Weight (kDa)

6.05

Isoelectric Point (pI)

47.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 74 - 363 5.9e-20 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 191 - 332 3.3e-26 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 1130
AciI CCGC 3 cut(s) 558, 639, 1047
AcsI RAATTY 3 cut(s) 44, 595, 1116
AfaI GTAC 3 cut(s) 181, 367, 556
AfiI CCNNNNNNNGG 4 cut(s) 503, 829, 956, 1137
AflII CTTAAG 1 cut(s) 671
AgsI TTSAA 7 cut(s) 204, 304, 514, 593, 762, 1070, 1076
AjnI CCWGG 2 cut(s) 828, 871
AluBI AGCT 9 cut(s) 30, 167, 223, 307, 589, 811, 964, 982, 1112
AluI AGCT 9 cut(s) 30, 167, 223, 307, 589, 811, 964, 982, 1112
Ama87I CYCGRG 1 cut(s) 533
Aor13HI TCCGGA 1 cut(s) 1130
AoxI GGCC 1 cut(s) 409
ApeKI GCWGC 2 cut(s) 223, 636
ApoI RAATTY 3 cut(s) 44, 595, 1116
Asp700I GAANNNNTTC 2 cut(s) 70, 1126
AspS9I GGNCC 1 cut(s) 409
AsuC2I CCSGG 1 cut(s) 1102
AsuHPI GGTGA 3 cut(s) 66, 812, 1043
AsuII TTCGAA 1 cut(s) 1120
AvaI CYCGRG 1 cut(s) 533
BaeI ACNNNNGTAYC 2 cut(s) 538, 571
BbvI GCAGC 2 cut(s) 210, 648
BccI CCATC 3 cut(s) 465, 696, 1131
BciT130I CCWGG 2 cut(s) 830, 873
BciVI GTATCC 2 cut(s) 46, 457
BclI TGATCA 2 cut(s) 124, 444
BcnI CCSGG 1 cut(s) 1102
BfaI CTAG 1 cut(s) 545
BfmI CTRYAG 2 cut(s) 468, 783
BfrI CTTAAG 1 cut(s) 671
BfuI GTATCC 2 cut(s) 46, 457
BisI GCNGC 2 cut(s) 224, 637
BlsI GCNGC 2 cut(s) 225, 638
Bme1390I CCNGG 3 cut(s) 830, 873, 1102
BmeT110I CYCGRG 1 cut(s) 533
BmgT120I GGNCC 1 cut(s) 409
BmiI GGNNCC 1 cut(s) 410
BmrFI CCNGG 3 cut(s) 830, 873, 1102
BmsI GCATC 2 cut(s) 480, 516
BplI GAGNNNNNCTC 4 cut(s) 79, 111, 1096, 1128
BpmI CTGGAG 1 cut(s) 506
Bpu14I TTCGAA 1 cut(s) 1120
BpuEI CTTGAG 3 cut(s) 472, 604, 824
BpuMI CCSGG 1 cut(s) 1102
BsaWI WCCGGW 2 cut(s) 496, 1130
Bsc4I CCNNNNNNNGG 4 cut(s) 503, 829, 956, 1137
Bse1I ACTGG 1 cut(s) 684
BseAI TCCGGA 1 cut(s) 1130
BseBI CCWGG 2 cut(s) 830, 873
BseGI GGATG 2 cut(s) 707, 712
BseLI CCNNNNNNNGG 4 cut(s) 503, 829, 956, 1137
BseMII CTCAG 3 cut(s) 123, 644, 988
BseNI ACTGG 1 cut(s) 684
BseXI GCAGC 2 cut(s) 210, 648
BshFI GGCC 1 cut(s) 411
BsiHKCI CYCGRG 1 cut(s) 533
BsiSI CCGG 3 cut(s) 497, 1101, 1131
BslFI GGGAC 3 cut(s) 671, 972, 1074
BslI CCNNNNNNNGG 4 cut(s) 503, 829, 956, 1137
BsmFI GGGAC 3 cut(s) 671, 972, 1074
BsmI GAATGC 1 cut(s) 255
BsnI GGCC 1 cut(s) 411
BsoBI CYCGRG 1 cut(s) 533
Bsp119I TTCGAA 1 cut(s) 1120
Bsp13I TCCGGA 1 cut(s) 1130
Bsp143I GATC 2 cut(s) 124, 444
BspACI CCGC 3 cut(s) 558, 639, 1047
BspANI GGCC 1 cut(s) 411
BspCNI CTCAG 3 cut(s) 124, 645, 987
BspEI TCCGGA 1 cut(s) 1130
BspLI GGNNCC 1 cut(s) 410
BspT104I TTCGAA 1 cut(s) 1120
BspTI CTTAAG 1 cut(s) 671
BsrI ACTGG 1 cut(s) 684
BssMI GATC 2 cut(s) 124, 444
Bst2UI CCWGG 2 cut(s) 830, 873
Bst4CI ACNGT 3 cut(s) 335, 404, 784
BstAFI CTTAAG 1 cut(s) 671
BstBI TTCGAA 1 cut(s) 1120
BstC8I GCNNGC 3 cut(s) 28, 165, 426
BstDEI CTNAG 5 cut(s) 53, 132, 311, 653, 974
BstF5I GGATG 2 cut(s) 707, 712
BstKTI GATC 2 cut(s) 127, 447
BstMBI GATC 2 cut(s) 124, 444
BstMWI GCNNNNNNNGC 2 cut(s) 313, 808
BstNI CCWGG 2 cut(s) 830, 873
BstSCI CCNGG 3 cut(s) 828, 871, 1100
BstSFI CTRYAG 2 cut(s) 468, 783
BstV1I GCAGC 2 cut(s) 210, 648
BsuI GTATCC 2 cut(s) 46, 457
BsuRI GGCC 1 cut(s) 411
BtsCI GGATG 2 cut(s) 707, 712
BtsIMutI CAGTG 1 cut(s) 650
Cac8I GCNNGC 3 cut(s) 28, 165, 426
Cfr13I GGNCC 1 cut(s) 409
Csp6I GTAC 3 cut(s) 180, 366, 555
CviAII CATG 1 cut(s) 5
CviQI GTAC 3 cut(s) 180, 366, 555
DdeI CTNAG 5 cut(s) 53, 132, 311, 653, 974
DpnI GATC 2 cut(s) 126, 446
DpnII GATC 2 cut(s) 124, 444
Eco88I CYCGRG 1 cut(s) 533
EcoO109I RGGNCCY 1 cut(s) 409
EcoRI GAATTC 1 cut(s) 1116
EcoRII CCWGG 2 cut(s) 828, 871
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 1 cut(s) 8
FaqI GGGAC 3 cut(s) 671, 972, 1074
FatI CATG 1 cut(s) 4
FauI CCCGC 1 cut(s) 1040
FbaI TGATCA 2 cut(s) 124, 444
Fnu4HI GCNGC 2 cut(s) 224, 637
FokI GGATG 2 cut(s) 714, 719
Fsp4HI GCNGC 2 cut(s) 224, 637
FspBI CTAG 1 cut(s) 545
GluI GCNGC 2 cut(s) 224, 637
GsuI CTGGAG 1 cut(s) 506
HaeIII GGCC 1 cut(s) 411
HapII CCGG 3 cut(s) 497, 1101, 1131
Hin1II CATG 1 cut(s) 8
HindIII AAGCTT 3 cut(s) 28, 305, 587
HinfI GANTC 6 cut(s) 71, 94, 287, 728, 758, 1141
HpaII CCGG 3 cut(s) 497, 1101, 1131
HphI GGTGA 3 cut(s) 66, 812, 1043
Hpy188I TCNGA 5 cut(s) 189, 883, 933, 977, 1021
Hpy188III TCNNGA 5 cut(s) 39, 461, 523, 545, 1131
HpyAV CCTTC 2 cut(s) 978, 1037
HpyCH4III ACNGT 3 cut(s) 335, 404, 784
HpyCH4IV ACGT 1 cut(s) 195
HpyCH4V TGCA 3 cut(s) 4, 382, 631
HpyF10VI GCNNNNNNNGC 2 cut(s) 313, 808
HpyF3I CTNAG 5 cut(s) 53, 132, 311, 653, 974
HpySE526I ACGT 1 cut(s) 195
Hsp92II CATG 1 cut(s) 8
Kpn2I TCCGGA 1 cut(s) 1130
Ksp22I TGATCA 2 cut(s) 124, 444
Kzo9I GATC 2 cut(s) 124, 444
LmnI GCTCC 1 cut(s) 816
Lsp1109I GCAGC 2 cut(s) 210, 648
LweI GCATC 2 cut(s) 480, 516
MaeI CTAG 1 cut(s) 545
MaeII ACGT 1 cut(s) 195
MaeIII GTNAC 3 cut(s) 196, 506, 1031
MalI GATC 2 cut(s) 126, 446
MboI GATC 2 cut(s) 124, 444
MboII GAAGA 6 cut(s) 450, 728, 731, 800, 885, 1146
MlyI GAGTC 2 cut(s) 88, 737
MmeI TCCRAC 2 cut(s) 838, 1006
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1130
MroXI GAANNNNTTC 2 cut(s) 70, 1126
MseI TTAA 9 cut(s) 245, 294, 482, 581, 672, 846, 915, 924, 1155
MspA1I CMGCKG 1 cut(s) 639
MspCI CTTAAG 1 cut(s) 671
MspI CCGG 3 cut(s) 497, 1101, 1131
MspR9I CCNGG 3 cut(s) 830, 873, 1102
Mva1269I GAATGC 1 cut(s) 255
MvaI CCWGG 2 cut(s) 830, 873
MwoI GCNNNNNNNGC 2 cut(s) 313, 808
NciI CCSGG 1 cut(s) 1102
NdeII GATC 2 cut(s) 124, 444
NlaIII CATG 1 cut(s) 8
NlaIV GGNNCC 1 cut(s) 410
NmuCI GTSAC 1 cut(s) 1031
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 1120
PctI GAATGC 1 cut(s) 255
PdmI GAANNNNTTC 2 cut(s) 70, 1126
PfeI GAWTC 4 cut(s) 71, 287, 758, 1141
PkrI GCNGC 2 cut(s) 225, 638
PleI GAGTC 2 cut(s) 88, 736
PpsI GAGTC 2 cut(s) 88, 736
Psp6I CCWGG 2 cut(s) 828, 871
PspGI CCWGG 2 cut(s) 828, 871
PspN4I GGNNCC 1 cut(s) 410
PspPI GGNCC 1 cut(s) 409
RsaI GTAC 3 cut(s) 181, 367, 556
RsaNI GTAC 3 cut(s) 180, 366, 555
SaqAI TTAA 9 cut(s) 245, 294, 482, 581, 672, 846, 915, 924, 1155
SatI GCNGC 2 cut(s) 224, 637
Sau3AI GATC 2 cut(s) 124, 444
Sau96I GGNCC 1 cut(s) 409
SchI GAGTC 2 cut(s) 88, 737
ScrFI CCNGG 3 cut(s) 830, 873, 1102
SfaNI GCATC 2 cut(s) 480, 516
SfcI CTRYAG 2 cut(s) 468, 783
SfuI TTCGAA 1 cut(s) 1120
SmlI CTYRAG 4 cut(s) 451, 619, 671, 803
SmoI CTYRAG 4 cut(s) 451, 619, 671, 803
SsiI CCGC 3 cut(s) 558, 639, 1047
SspI AATATT 2 cut(s) 173, 887
SspMI CTAG 1 cut(s) 545
StyD4I CCNGG 3 cut(s) 828, 871, 1100
TaaI ACNGT 3 cut(s) 335, 404, 784
TaiI ACGT 1 cut(s) 198
TaqI TCGA 2 cut(s) 1114, 1120
TatI WGTACW 1 cut(s) 365
TfiI GAWTC 4 cut(s) 71, 287, 758, 1141
Tru1I TTAA 9 cut(s) 245, 294, 482, 581, 672, 846, 915, 924, 1155
Tru9I TTAA 9 cut(s) 245, 294, 482, 581, 672, 846, 915, 924, 1155
TscAI CASTG 1 cut(s) 657
TseFI GTSAC 1 cut(s) 1031
TseI GCWGC 2 cut(s) 223, 636
Tsp45I GTSAC 1 cut(s) 1031
TspDTI ATGAA 4 cut(s) 96, 206, 328, 1056
TspRI CASTG 1 cut(s) 657
Vha464I CTTAAG 1 cut(s) 671
XapI RAATTY 3 cut(s) 44, 595, 1116
XbaI TCTAGA 1 cut(s) 544
XmnI GAANNNNTTC 2 cut(s) 70, 1126
XspI CTAG 1 cut(s) 545
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.