Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 11 - 102 | 3.7e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 177 - 348 | 1.5e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 506 | 7.6e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 579 - 871 | 6e-28 | Leucine-rich repeat region |
| LRR_Zer-1 | PF25013 | 600 - 664 | 3e-06 | Zer-1-like, Leucine-rich repeats |
| LRR_R13L1-DRL21 | PF25019 | 693 - 819 | 1.6e-37 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1037 |
| Acc36I | ACCTGC | 1 cut(s) | 1037 |
| Acc65I | GGTACC | 1 cut(s) | 965 |
| AccB1I | GGYRCC | 1 cut(s) | 965 |
| AccI | GTMKAC | 5 cut(s) | 648, 979, 2908, 2943, 3055 |
| AccII | CGCG | 1 cut(s) | 2109 |
| AciI | CCGC | 8 cut(s) | 111, 319, 749, 1233, 2109, 2316, 2391, 2750 |
| AclWI | GGATC | 2 cut(s) | 1055, 1338 |
| AcsI | RAATTY | 5 cut(s) | 710, 827, 862, 2662, 3086 |
| AcuI | CTGAAG | 4 cut(s) | 1292, 1374, 1754, 2081 |
| AcvI | CACGTG | 1 cut(s) | 938 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 605, 1239, 2009, 2175, 2584, 2831, 2987, 3124 |
| AflIII | ACRYGT | 3 cut(s) | 935, 1444, 1699 |
| AjnI | CCWGG | 1 cut(s) | 2329 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2171, 2203 |
| Alw21I | GWGCWC | 2 cut(s) | 882, 1758 |
| Alw26I | GTCTC | 4 cut(s) | 1531, 2159, 2702, 2781 |
| AlwI | GGATC | 2 cut(s) | 1055, 1338 |
| Ama87I | CYCGRG | 4 cut(s) | 335, 2125, 2297, 2528 |
| AoxI | GGCC | 1 cut(s) | 540 |
| ApeKI | GCWGC | 6 cut(s) | 315, 1121, 1786, 2422, 2871, 2995 |
| ApoI | RAATTY | 5 cut(s) | 710, 827, 862, 2662, 3086 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2286, 2318, 2726, 2758 |
| AseI | ATTAAT | 1 cut(s) | 2546 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2607, 2650, 2820 |
| Asp718I | GGTACC | 1 cut(s) | 965 |
| AspLEI | GCGC | 3 cut(s) | 2109, 2698, 2871 |
| AsuC2I | CCSGG | 1 cut(s) | 2539 |
| AsuHPI | GGTGA | 6 cut(s) | 1793, 2081, 2237, 2482, 2911, 3057 |
| AsuII | TTCGAA | 1 cut(s) | 2732 |
| AvaI | CYCGRG | 4 cut(s) | 335, 2125, 2297, 2528 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 323, 356 |
| BanI | GGYRCC | 1 cut(s) | 965 |
| BanII | GRGCYC | 1 cut(s) | 882 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1347, 1379, 2592, 2624 |
| BbrPI | CACGTG | 1 cut(s) | 938 |
| BbsI | GAAGAC | 3 cut(s) | 110, 484, 815 |
| Bbv12I | GWGCWC | 2 cut(s) | 882, 1758 |
| BbvI | GCAGC | 6 cut(s) | 327, 1108, 1773, 2434, 2858, 2982 |
| BceAI | ACGGC | 3 cut(s) | 1604, 2824, 3060 |
| BciT130I | CCWGG | 1 cut(s) | 2331 |
| BciVI | GTATCC | 1 cut(s) | 3031 |
| BclI | TGATCA | 1 cut(s) | 1627 |
| BcnI | CCSGG | 1 cut(s) | 2539 |
| BcoDI | GTCTC | 4 cut(s) | 1531, 2159, 2702, 2781 |
| BfaI | CTAG | 8 cut(s) | 198, 510, 782, 1421, 1791, 1919, 2054, 2352 |
| BfmI | CTRYAG | 1 cut(s) | 1056 |
| BfoI | RGCGCY | 1 cut(s) | 2872 |
| BfuAI | ACCTGC | 1 cut(s) | 1037 |
| BfuI | GTATCC | 1 cut(s) | 3031 |
| BglII | AGATCT | 4 cut(s) | 778, 1357, 2023, 2344 |
| BisI | GCNGC | 9 cut(s) | 316, 319, 1122, 1787, 2317, 2423, 2750, 2872, 2996 |
| BlsI | GCNGC | 9 cut(s) | 317, 320, 1123, 1788, 2318, 2424, 2751, 2873, 2997 |
| BmcAI | AGTACT | 2 cut(s) | 1409, 1677 |
| Bme1390I | CCNGG | 2 cut(s) | 2331, 2539 |
| BmeT110I | CYCGRG | 4 cut(s) | 335, 2125, 2297, 2528 |
| BmiI | GGNNCC | 2 cut(s) | 381, 967 |
| BmrFI | CCNGG | 2 cut(s) | 2331, 2539 |
| BmsI | GCATC | 6 cut(s) | 160, 1622, 1822, 1986, 2130, 2146 |
| BoxI | GACNNNNGTC | 1 cut(s) | 372 |
| BpiI | GAAGAC | 3 cut(s) | 110, 484, 815 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 4 cut(s) | 107, 1551, 2282, 3091 |
| Bpu14I | TTCGAA | 1 cut(s) | 2732 |
| BpuEI | CTTGAG | 5 cut(s) | 904, 1290, 2465, 2948, 2968 |
| BpuMI | CCSGG | 1 cut(s) | 2539 |
| BsaAI | YACGTR | 3 cut(s) | 938, 1696, 1700 |
| BsaI | GGTCTC | 2 cut(s) | 2159, 2702 |
| BsaJI | CCNNGG | 6 cut(s) | 94, 2003, 2160, 2529, 2538, 3024 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 605, 1239, 2009, 2175, 2584, 2831, 2987, 3124 |
| Bse1I | ACTGG | 5 cut(s) | 396, 580, 2071, 2589, 3108 |
| Bse3DI | GCAATG | 1 cut(s) | 2744 |
| BseBI | CCWGG | 1 cut(s) | 2331 |
| BseDI | CCNNGG | 6 cut(s) | 94, 2003, 2160, 2529, 2538, 3024 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 605, 1239, 2009, 2175, 2584, 2831, 2987, 3124 |
| BseMI | GCAATG | 1 cut(s) | 2744 |
| BseMII | CTCAG | 7 cut(s) | 202, 990, 1578, 2501, 2656, 2729, 3030 |
| BseNI | ACTGG | 5 cut(s) | 396, 580, 2071, 2589, 3108 |
| BseRI | GAGGAG | 2 cut(s) | 191, 2615 |
| BseXI | GCAGC | 6 cut(s) | 327, 1108, 1773, 2434, 2858, 2982 |
| BsgI | GTGCAG | 1 cut(s) | 3136 |
| Bsh1236I | CGCG | 1 cut(s) | 2109 |
| BshFI | GGCC | 1 cut(s) | 542 |
| BshNI | GGYRCC | 1 cut(s) | 965 |
| BsiHKAI | GWGCWC | 2 cut(s) | 882, 1758 |
| BsiHKCI | CYCGRG | 4 cut(s) | 335, 2125, 2297, 2528 |
| BsiSI | CCGG | 2 cut(s) | 77, 2538 |
| BsiWI | CGTACG | 1 cut(s) | 1696 |
| BslFI | GGGAC | 3 cut(s) | 1649, 1692, 2511 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 605, 1239, 2009, 2175, 2584, 2831, 2987, 3124 |
| BsmAI | GTCTC | 4 cut(s) | 1531, 2159, 2702, 2781 |
| BsmBI | CGTCTC | 1 cut(s) | 2781 |
| BsmFI | GGGAC | 3 cut(s) | 1649, 1692, 2511 |
| BsmI | GAATGC | 3 cut(s) | 1048, 1615, 2698 |
| BsnI | GGCC | 1 cut(s) | 542 |
| Bso31I | GGTCTC | 2 cut(s) | 2159, 2702 |
| BsoBI | CYCGRG | 4 cut(s) | 335, 2125, 2297, 2528 |
| Bsp119I | TTCGAA | 1 cut(s) | 2732 |
| Bsp1286I | GDGCHC | 2 cut(s) | 882, 1758 |
| Bsp1407I | TGTACA | 1 cut(s) | 2859 |
| BspACI | CCGC | 8 cut(s) | 111, 319, 749, 1233, 2109, 2316, 2391, 2750 |
| BspANI | GGCC | 1 cut(s) | 542 |
| BspCNI | CTCAG | 7 cut(s) | 201, 991, 1577, 2502, 2655, 2730, 3029 |
| BspFNI | CGCG | 1 cut(s) | 2109 |
| BspHI | TCATGA | 1 cut(s) | 358 |
| BspLI | GGNNCC | 2 cut(s) | 381, 967 |
| BspMI | ACCTGC | 1 cut(s) | 1037 |
| BspPI | GGATC | 2 cut(s) | 1055, 1338 |
| BspT104I | TTCGAA | 1 cut(s) | 2732 |
| BspT107I | GGYRCC | 1 cut(s) | 965 |
| BspTNI | GGTCTC | 2 cut(s) | 2159, 2702 |
| BsrDI | GCAATG | 1 cut(s) | 2744 |
| BsrGI | TGTACA | 1 cut(s) | 2859 |
| BsrI | ACTGG | 5 cut(s) | 396, 580, 2071, 2589, 3108 |
| BssECI | CCNNGG | 6 cut(s) | 94, 2003, 2160, 2529, 2538, 3024 |
| BssNAI | GTATAC | 2 cut(s) | 649, 3056 |
| BssT1I | CCWWGG | 2 cut(s) | 2003, 2160 |
| Bst1107I | GTATAC | 2 cut(s) | 649, 3056 |
| Bst2UI | CCWGG | 1 cut(s) | 2331 |
| Bst4CI | ACNGT | 9 cut(s) | 859, 1292, 1387, 1640, 1680, 2476, 2894, 3028, 3080 |
| Bst6I | CTCTTC | 4 cut(s) | 40, 498, 1209, 2613 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2758 |
| BstAUI | TGTACA | 1 cut(s) | 2859 |
| BstBAI | YACGTR | 3 cut(s) | 938, 1696, 1700 |
| BstBI | TTCGAA | 1 cut(s) | 2732 |
| BstC8I | GCNNGC | 4 cut(s) | 955, 1905, 2557, 3115 |
| BstDSI | CCRYGG | 1 cut(s) | 3024 |
| BstEII | GGTNACC | 1 cut(s) | 2533 |
| BstFNI | CGCG | 1 cut(s) | 2109 |
| BstH2I | RGCGCY | 1 cut(s) | 2872 |
| BstHHI | GCGC | 3 cut(s) | 2109, 2698, 2871 |
| BstMAI | GTCTC | 4 cut(s) | 1531, 2159, 2702, 2781 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 220, 1590, 1819, 2695, 2758 |
| BstNI | CCWGG | 1 cut(s) | 2331 |
| BstNSI | RCATGY | 4 cut(s) | 790, 957, 1448, 2150 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 372 |
| BstPI | GGTNACC | 1 cut(s) | 2533 |
| BstSCI | CCNGG | 2 cut(s) | 2329, 2537 |
| BstSFI | CTRYAG | 1 cut(s) | 1056 |
| BstSNI | TACGTA | 1 cut(s) | 1696 |
| BstUI | CGCG | 1 cut(s) | 2109 |
| BstV1I | GCAGC | 6 cut(s) | 327, 1108, 1773, 2434, 2858, 2982 |
| BstV2I | GAAGAC | 3 cut(s) | 110, 484, 815 |
| BstX2I | RGATCY | 6 cut(s) | 778, 1060, 1330, 1357, 2023, 2344 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 391 |
| BstYI | RGATCY | 6 cut(s) | 778, 1060, 1330, 1357, 2023, 2344 |
| BstZ17I | GTATAC | 2 cut(s) | 649, 3056 |
| BsuI | GTATCC | 1 cut(s) | 3031 |
| BsuRI | GGCC | 1 cut(s) | 542 |
| BtgI | CCRYGG | 1 cut(s) | 3024 |
| BtsI | GCAGTG | 1 cut(s) | 2906 |
| BtsIMutI | CAGTG | 5 cut(s) | 1367, 2064, 2582, 2906, 3115 |
| BveI | ACCTGC | 1 cut(s) | 1037 |
| Cac8I | GCNNGC | 4 cut(s) | 955, 1905, 2557, 3115 |
| CciI | TCATGA | 1 cut(s) | 358 |
| CfoI | GCGC | 3 cut(s) | 2109, 2698, 2871 |
| CseI | GACGC | 1 cut(s) | 1949 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1356, 1391 |
| DraI | TTTAAA | 1 cut(s) | 2851 |
| Eam1104I | CTCTTC | 4 cut(s) | 40, 498, 1209, 2613 |
| EarI | CTCTTC | 4 cut(s) | 40, 498, 1209, 2613 |
| Ecl136II | GAGCTC | 1 cut(s) | 880 |
| Eco105I | TACGTA | 1 cut(s) | 1696 |
| Eco130I | CCWWGG | 2 cut(s) | 2003, 2160 |
| Eco24I | GRGCYC | 1 cut(s) | 882 |
| Eco31I | GGTCTC | 2 cut(s) | 2159, 2702 |
| Eco53kI | GAGCTC | 1 cut(s) | 880 |
| Eco57I | CTGAAG | 4 cut(s) | 1292, 1374, 1754, 2081 |
| Eco72I | CACGTG | 1 cut(s) | 938 |
| Eco88I | CYCGRG | 4 cut(s) | 335, 2125, 2297, 2528 |
| Eco91I | GGTNACC | 1 cut(s) | 2533 |
| EcoICRI | GAGCTC | 1 cut(s) | 880 |
| EcoO65I | GGTNACC | 1 cut(s) | 2533 |
| EcoRII | CCWGG | 1 cut(s) | 2329 |
| EcoT14I | CCWWGG | 2 cut(s) | 2003, 2160 |
| EcoT22I | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |
| EcoT38I | GRGCYC | 1 cut(s) | 882 |
| ErhI | CCWWGG | 2 cut(s) | 2003, 2160 |
| Esp3I | CGTCTC | 1 cut(s) | 2781 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 423, 455, 1019, 1051 |
| FaqI | GGGAC | 3 cut(s) | 1649, 1692, 2511 |
| FauI | CCCGC | 1 cut(s) | 1240 |
| FauNDI | CATATG | 2 cut(s) | 1196, 2757 |
| FbaI | TGATCA | 1 cut(s) | 1627 |
| FblI | GTMKAC | 5 cut(s) | 648, 979, 2908, 2943, 3055 |
| Fnu4HI | GCNGC | 9 cut(s) | 316, 319, 1122, 1787, 2317, 2423, 2750, 2872, 2996 |
| FriOI | GRGCYC | 1 cut(s) | 882 |
| Fsp4HI | GCNGC | 9 cut(s) | 316, 319, 1122, 1787, 2317, 2423, 2750, 2872, 2996 |
| FspBI | CTAG | 8 cut(s) | 198, 510, 782, 1421, 1791, 1919, 2054, 2352 |
| GlaI | GCGC | 3 cut(s) | 2108, 2697, 2870 |
| GluI | GCNGC | 9 cut(s) | 316, 319, 1122, 1787, 2317, 2423, 2750, 2872, 2996 |
| GsuI | CTGGAG | 4 cut(s) | 107, 1551, 2282, 3091 |
| HaeII | RGCGCY | 1 cut(s) | 2872 |
| HaeIII | GGCC | 1 cut(s) | 542 |
| HapII | CCGG | 2 cut(s) | 77, 2538 |
| HgaI | GACGC | 1 cut(s) | 1949 |
| HhaI | GCGC | 3 cut(s) | 2109, 2698, 2871 |
| Hin6I | GCGC | 3 cut(s) | 2107, 2696, 2869 |
| HinP1I | GCGC | 3 cut(s) | 2107, 2696, 2869 |
| HincII | GTYRAC | 5 cut(s) | 85, 424, 816, 2596, 2944 |
| HindII | GTYRAC | 5 cut(s) | 85, 424, 816, 2596, 2944 |
| HindIII | AAGCTT | 1 cut(s) | 1736 |
| HpaII | CCGG | 2 cut(s) | 77, 2538 |
| HphI | GGTGA | 6 cut(s) | 1793, 2081, 2237, 2482, 2911, 3057 |
| Hpy99I | CGWCG | 2 cut(s) | 1018, 1069 |
| HpyAV | CCTTC | 8 cut(s) | 290, 516, 938, 980, 1045, 2447, 2822, 3118 |
| HpyCH4III | ACNGT | 9 cut(s) | 859, 1292, 1387, 1640, 1680, 2476, 2894, 3028, 3080 |
| HpyCH4IV | ACGT | 9 cut(s) | 158, 812, 937, 1147, 1695, 1699, 1705, 1892, 2598 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 220, 1590, 1819, 2695, 2758 |
| HpySE526I | ACGT | 9 cut(s) | 158, 812, 937, 1147, 1695, 1699, 1705, 1892, 2598 |
| HspAI | GCGC | 3 cut(s) | 2107, 2696, 2869 |
| KpnI | GGTACC | 1 cut(s) | 969 |
| Ksp22I | TGATCA | 1 cut(s) | 1627 |
| LmnI | GCTCC | 3 cut(s) | 23, 126, 877 |
| Lsp1109I | GCAGC | 6 cut(s) | 327, 1108, 1773, 2434, 2858, 2982 |
| LweI | GCATC | 6 cut(s) | 160, 1622, 1822, 1986, 2130, 2146 |
| MaeI | CTAG | 8 cut(s) | 198, 510, 782, 1421, 1791, 1919, 2054, 2352 |
| MaeII | ACGT | 9 cut(s) | 158, 812, 937, 1147, 1695, 1699, 1705, 1892, 2598 |
| MfeI | CAATTG | 2 cut(s) | 600, 3093 |
| MflI | RGATCY | 6 cut(s) | 778, 1060, 1330, 1357, 2023, 2344 |
| MhlI | GDGCHC | 2 cut(s) | 882, 1758 |
| MlyI | GAGTC | 7 cut(s) | 210, 515, 672, 1104, 1582, 2289, 2521 |
| MmeI | TCCRAC | 6 cut(s) | 237, 1378, 1530, 2296, 2319, 3062 |
| Mph1103I | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2607, 2650, 2820 |
| MslI | CAYNNNNRTG | 1 cut(s) | 246 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspI | CCGG | 2 cut(s) | 77, 2538 |
| MspR9I | CCNGG | 2 cut(s) | 2331, 2539 |
| MunI | CAATTG | 2 cut(s) | 600, 3093 |
| Mva1269I | GAATGC | 3 cut(s) | 1048, 1615, 2698 |
| MvaI | CCWGG | 1 cut(s) | 2331 |
| MvnI | CGCG | 1 cut(s) | 2109 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 220, 1590, 1819, 2695, 2758 |
| NciI | CCSGG | 1 cut(s) | 2539 |
| NdeI | CATATG | 2 cut(s) | 1196, 2757 |
| NlaIV | GGNNCC | 2 cut(s) | 381, 967 |
| NmuCI | GTSAC | 6 cut(s) | 571, 751, 928, 2149, 2225, 2470 |
| NsiI | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |
| NspI | RCATGY | 4 cut(s) | 790, 957, 1448, 2150 |
| NspV | TTCGAA | 1 cut(s) | 2732 |
| PaeI | GCATGC | 1 cut(s) | 957 |
| PaeR7I | CTCGAG | 2 cut(s) | 335, 2297 |
| PagI | TCATGA | 1 cut(s) | 358 |
| PaqCI | CACCTGC | 1 cut(s) | 1037 |
| PciI | ACATGT | 1 cut(s) | 1444 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 155 |
| PctI | GAATGC | 3 cut(s) | 1048, 1615, 2698 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2607, 2650, 2820 |
| PfeI | GAWTC | 5 cut(s) | 305, 2302, 2603, 2816, 2972 |
| Pfl23II | CGTACG | 1 cut(s) | 1696 |
| PflFI | GACNNNGTC | 2 cut(s) | 662, 2591 |
| PkrI | GCNGC | 9 cut(s) | 317, 320, 1123, 1788, 2318, 2424, 2751, 2873, 2997 |
| PleI | GAGTC | 7 cut(s) | 209, 514, 671, 1104, 1582, 2289, 2520 |
| PmaCI | CACGTG | 1 cut(s) | 938 |
| PmlI | CACGTG | 1 cut(s) | 938 |
| PpsI | GAGTC | 7 cut(s) | 209, 514, 671, 1104, 1582, 2289, 2520 |
| Ppu21I | YACGTR | 3 cut(s) | 938, 1696, 1700 |
| PscI | ACATGT | 1 cut(s) | 1444 |
| PshAI | GACNNNNGTC | 1 cut(s) | 372 |
| PshBI | ATTAAT | 1 cut(s) | 2546 |
| Psp124BI | GAGCTC | 1 cut(s) | 882 |
| Psp6I | CCWGG | 1 cut(s) | 2329 |
| PspCI | CACGTG | 1 cut(s) | 938 |
| PspEI | GGTNACC | 1 cut(s) | 2533 |
| PspGI | CCWGG | 1 cut(s) | 2329 |
| PspLI | CGTACG | 1 cut(s) | 1696 |
| PspN4I | GGNNCC | 2 cut(s) | 381, 967 |
| PspXI | VCTCGAGB | 1 cut(s) | 335 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 372, 404 |
| PsuI | RGATCY | 6 cut(s) | 778, 1060, 1330, 1357, 2023, 2344 |
| PsyI | GACNNNGTC | 2 cut(s) | 662, 2591 |
| RseI | CAYNNNNRTG | 1 cut(s) | 246 |
| SacI | GAGCTC | 1 cut(s) | 882 |
| SalI | GTCGAC | 1 cut(s) | 2942 |
| SatI | GCNGC | 9 cut(s) | 316, 319, 1122, 1787, 2317, 2423, 2750, 2872, 2996 |
| ScaI | AGTACT | 2 cut(s) | 1409, 1677 |
| SchI | GAGTC | 7 cut(s) | 210, 515, 672, 1104, 1582, 2289, 2521 |
| ScrFI | CCNGG | 2 cut(s) | 2331, 2539 |
| SduI | GDGCHC | 2 cut(s) | 882, 1758 |
| SfaNI | GCATC | 6 cut(s) | 160, 1622, 1822, 1986, 2130, 2146 |
| SfcI | CTRYAG | 1 cut(s) | 1056 |
| Sfr274I | CTCGAG | 2 cut(s) | 335, 2297 |
| SfuI | TTCGAA | 1 cut(s) | 2732 |
| SlaI | CTCGAG | 2 cut(s) | 335, 2297 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 246 |
| SmlI | CTYRAG | 7 cut(s) | 335, 883, 1305, 2297, 2444, 2927, 2947 |
| SmoI | CTYRAG | 7 cut(s) | 335, 883, 1305, 2297, 2444, 2927, 2947 |
| SnaBI | TACGTA | 1 cut(s) | 1696 |
| SphI | GCATGC | 1 cut(s) | 957 |
| SsiI | CCGC | 8 cut(s) | 111, 319, 749, 1233, 2109, 2316, 2391, 2750 |
| SspI | AATATT | 4 cut(s) | 1162, 1182, 2077, 2140 |
| SspMI | CTAG | 8 cut(s) | 198, 510, 782, 1421, 1791, 1919, 2054, 2352 |
| SstI | GAGCTC | 1 cut(s) | 882 |
| StyD4I | CCNGG | 2 cut(s) | 2329, 2537 |
| StyI | CCWWGG | 2 cut(s) | 2003, 2160 |
| TaaI | ACNGT | 9 cut(s) | 859, 1292, 1387, 1640, 1680, 2476, 2894, 3028, 3080 |
| TaiI | ACGT | 9 cut(s) | 161, 815, 940, 1150, 1698, 1702, 1708, 1895, 2601 |
| TatI | WGTACW | 4 cut(s) | 1407, 1675, 1871, 2859 |
| TauI | GCSGC | 3 cut(s) | 321, 2319, 2752 |
| TfiI | GAWTC | 5 cut(s) | 305, 2302, 2603, 2816, 2972 |
| TscAI | CASTG | 5 cut(s) | 1374, 2071, 2589, 2906, 3115 |
| TseFI | GTSAC | 6 cut(s) | 571, 751, 928, 2149, 2225, 2470 |
| TseI | GCWGC | 6 cut(s) | 315, 1121, 1786, 2422, 2871, 2995 |
| Tsp45I | GTSAC | 6 cut(s) | 571, 751, 928, 2149, 2225, 2470 |
| TspGWI | ACGGA | 3 cut(s) | 602, 1053, 2246 |
| TspRI | CASTG | 5 cut(s) | 1374, 2071, 2589, 2906, 3115 |
| Tth111I | GACNNNGTC | 2 cut(s) | 662, 2591 |
| VspI | ATTAAT | 1 cut(s) | 2546 |
| XapI | RAATTY | 5 cut(s) | 710, 827, 862, 2662, 3086 |
| XbaI | TCTAGA | 2 cut(s) | 197, 781 |
| XceI | RCATGY | 4 cut(s) | 790, 957, 1448, 2150 |
| XhoI | CTCGAG | 2 cut(s) | 335, 2297 |
| XmiI | GTMKAC | 5 cut(s) | 648, 979, 2908, 2943, 3055 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2607, 2650, 2820 |
| XspI | CTAG | 8 cut(s) | 198, 510, 782, 1421, 1791, 1919, 2054, 2352 |
| ZrmI | AGTACT | 2 cut(s) | 1409, 1677 |
| Zsp2I | ATGCAT | 3 cut(s) | 1497, 1615, 2123 |