Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 102 | 2.3e-17 | Rx N-terminal domain |
| NB-ARC | PF00931 | 179 - 349 | 6e-37 | NB-ARC domain |
| WHD_DRP | PF23559 | 432 - 502 | 1.9e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 570 - 863 | 4e-29 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 574 - 628 | 2.3e-06 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 685 - 810 | 1.2e-36 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 971 |
| AccB1I | GGYRCC | 1 cut(s) | 971 |
| AccI | GTMKAC | 3 cut(s) | 432, 2875, 2910 |
| AccII | CGCG | 2 cut(s) | 531, 2085 |
| AccIII | TCCGGA | 1 cut(s) | 1517 |
| AciI | CCGC | 8 cut(s) | 111, 319, 569, 755, 1204, 1876, 2085, 2986 |
| AclI | AACGTT | 1 cut(s) | 3151 |
| AclWI | GGATC | 2 cut(s) | 1052, 2105 |
| AcsI | RAATTY | 4 cut(s) | 371, 716, 833, 868 |
| AcuI | CTGAAG | 5 cut(s) | 294, 1289, 1371, 1697, 2333 |
| AfaI | GTAC | 4 cut(s) | 973, 1446, 1846, 2482 |
| AfeI | AGCGCT | 1 cut(s) | 1274 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 114, 399, 611, 1985, 2560, 2795, 2954, 3092 |
| AflII | CTTAAG | 1 cut(s) | 2072 |
| AflIII | ACRYGT | 1 cut(s) | 1441 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1018 |
| AjiI | CACGTC | 1 cut(s) | 2526 |
| AjnI | CCWGG | 2 cut(s) | 392, 2302 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 131, 163 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2807, 2839 |
| Alw21I | GWGCWC | 1 cut(s) | 1731 |
| Alw26I | GTCTC | 3 cut(s) | 334, 1519, 3158 |
| AlwI | GGATC | 2 cut(s) | 1052, 2105 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2356 |
| Ama87I | CYCGRG | 2 cut(s) | 2101, 2504 |
| Aor13HI | TCCGGA | 1 cut(s) | 1517 |
| Aor51HI | AGCGCT | 1 cut(s) | 1274 |
| AoxI | GGCC | 2 cut(s) | 546, 3179 |
| ApeKI | GCWGC | 6 cut(s) | 118, 1118, 1759, 2395, 2959, 2962 |
| ApoI | RAATTY | 4 cut(s) | 371, 716, 833, 868 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2690, 2722 |
| AseI | ATTAAT | 4 cut(s) | 1922, 2432, 2436, 3111 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2784 |
| Asp718I | GGTACC | 1 cut(s) | 971 |
| AspLEI | GCGC | 3 cut(s) | 1275, 2085, 2662 |
| AspS9I | GGNCC | 3 cut(s) | 74, 1647, 3180 |
| AsuC2I | CCSGG | 2 cut(s) | 1959, 2515 |
| AsuHPI | GGTGA | 7 cut(s) | 1475, 1766, 2057, 2102, 2458, 2878, 3025 |
| AsuII | TTCGAA | 1 cut(s) | 3002 |
| AvaI | CYCGRG | 2 cut(s) | 2101, 2504 |
| AvaII | GGWCC | 2 cut(s) | 74, 1647 |
| BaeGI | GKGCMC | 1 cut(s) | 2294 |
| BanI | GGYRCC | 1 cut(s) | 971 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1344, 1376 |
| BbsI | GAAGAC | 4 cut(s) | 110, 1017, 2339, 2678 |
| Bbv12I | GWGCWC | 1 cut(s) | 1731 |
| BbvI | GCAGC | 6 cut(s) | 105, 1105, 1746, 2407, 2946, 2949 |
| BccI | CCATC | 9 cut(s) | 58, 286, 557, 566, 961, 1339, 1978, 2392, 2746 |
| BceAI | ACGGC | 2 cut(s) | 2788, 3028 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2827, 2861 |
| BciT130I | CCWGG | 2 cut(s) | 394, 2304 |
| BciVI | GTATCC | 1 cut(s) | 1956 |
| BclI | TGATCA | 1 cut(s) | 1609 |
| BcnI | CCSGG | 2 cut(s) | 1959, 2515 |
| BcoDI | GTCTC | 3 cut(s) | 334, 1519, 3158 |
| BfmI | CTRYAG | 1 cut(s) | 2992 |
| BfoI | RGCGCY | 1 cut(s) | 1276 |
| BfrI | CTTAAG | 1 cut(s) | 2072 |
| BfuI | GTATCC | 1 cut(s) | 1956 |
| BglII | AGATCT | 4 cut(s) | 784, 1327, 1354, 1999 |
| BisI | GCNGC | 7 cut(s) | 119, 319, 1119, 1760, 2396, 2960, 2963 |
| BlsI | GCNGC | 7 cut(s) | 120, 320, 1120, 1761, 2397, 2961, 2964 |
| Bme1390I | CCNGG | 4 cut(s) | 394, 1959, 2304, 2515 |
| Bme18I | GGWCC | 2 cut(s) | 74, 1647 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1018 |
| BmeT110I | CYCGRG | 2 cut(s) | 2101, 2504 |
| BmgBI | CACGTC | 1 cut(s) | 2526 |
| BmgT120I | GGNCC | 3 cut(s) | 74, 1647, 3180 |
| BmiI | GGNNCC | 3 cut(s) | 390, 973, 2458 |
| BmrFI | CCNGG | 4 cut(s) | 394, 1959, 2304, 2515 |
| BmrI | ACTGGG | 1 cut(s) | 889 |
| BmsI | GCATC | 8 cut(s) | 160, 1795, 1825, 1962, 2122, 2164, 2647, 2997 |
| BmuI | ACTGGG | 1 cut(s) | 889 |
| BoxI | GACNNNNGTC | 1 cut(s) | 381 |
| BpiI | GAAGAC | 4 cut(s) | 110, 1017, 2339, 2678 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 2 cut(s) | 2255, 3140 |
| Bpu14I | TTCGAA | 1 cut(s) | 3002 |
| BpuEI | CTTGAG | 7 cut(s) | 329, 910, 1287, 1715, 2255, 2438, 2923 |
| BpuMI | CCSGG | 2 cut(s) | 1959, 2515 |
| BsaJI | CCNNGG | 7 cut(s) | 94, 392, 1958, 1979, 2505, 2514, 2791 |
| BsaWI | WCCGGW | 4 cut(s) | 71, 76, 1517, 3075 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2391, 2421 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 114, 399, 611, 1985, 2560, 2795, 2954, 3092 |
| Bse118I | RCCGGY | 1 cut(s) | 1598 |
| Bse1I | ACTGG | 4 cut(s) | 586, 884, 2047, 2830 |
| Bse3DI | GCAATG | 2 cut(s) | 1845, 2708 |
| BseAI | TCCGGA | 1 cut(s) | 1517 |
| BseBI | CCWGG | 2 cut(s) | 394, 2304 |
| BseDI | CCNNGG | 7 cut(s) | 94, 392, 1958, 1979, 2505, 2514, 2791 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 114, 399, 611, 1985, 2560, 2795, 2954, 3092 |
| BseMI | GCAATG | 2 cut(s) | 1845, 2708 |
| BseMII | CTCAG | 4 cut(s) | 202, 1566, 2693, 2758 |
| BseNI | ACTGG | 4 cut(s) | 586, 884, 2047, 2830 |
| BseRI | GAGGAG | 3 cut(s) | 191, 1226, 2591 |
| BseSI | GKGCMC | 1 cut(s) | 2294 |
| BseXI | GCAGC | 6 cut(s) | 105, 1105, 1746, 2407, 2946, 2949 |
| BseYI | CCCAGC | 1 cut(s) | 113 |
| Bsh1236I | CGCG | 2 cut(s) | 531, 2085 |
| BshFI | GGCC | 2 cut(s) | 548, 3181 |
| BshNI | GGYRCC | 1 cut(s) | 971 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1731 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2101, 2504 |
| BsiSI | CCGG | 7 cut(s) | 72, 77, 1518, 1599, 1958, 2514, 3076 |
| BsiWI | CGTACG | 1 cut(s) | 2480 |
| BslFI | GGGAC | 2 cut(s) | 1631, 2487 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 114, 399, 611, 1985, 2560, 2795, 2954, 3092 |
| BsmAI | GTCTC | 3 cut(s) | 334, 1519, 3158 |
| BsmBI | CGTCTC | 1 cut(s) | 3158 |
| BsmFI | GGGAC | 2 cut(s) | 1631, 2487 |
| BsmI | GAATGC | 1 cut(s) | 2519 |
| BsnI | GGCC | 2 cut(s) | 548, 3181 |
| BsoBI | CYCGRG | 2 cut(s) | 2101, 2504 |
| Bsp119I | TTCGAA | 1 cut(s) | 3002 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1731, 2294 |
| Bsp13I | TCCGGA | 1 cut(s) | 1517 |
| BspACI | CCGC | 8 cut(s) | 111, 319, 569, 755, 1204, 1876, 2085, 2986 |
| BspANI | GGCC | 2 cut(s) | 548, 3181 |
| BspCNI | CTCAG | 4 cut(s) | 201, 1565, 2694, 2757 |
| BspEI | TCCGGA | 1 cut(s) | 1517 |
| BspFNI | CGCG | 2 cut(s) | 531, 2085 |
| BspLI | GGNNCC | 3 cut(s) | 390, 973, 2458 |
| BspPI | GGATC | 2 cut(s) | 1052, 2105 |
| BspT104I | TTCGAA | 1 cut(s) | 3002 |
| BspT107I | GGYRCC | 1 cut(s) | 971 |
| BspTI | CTTAAG | 1 cut(s) | 2072 |
| BsrDI | GCAATG | 2 cut(s) | 1845, 2708 |
| BsrFI | RCCGGY | 1 cut(s) | 1598 |
| BsrI | ACTGG | 4 cut(s) | 586, 884, 2047, 2830 |
| BssAI | RCCGGY | 1 cut(s) | 1598 |
| BssECI | CCNNGG | 7 cut(s) | 94, 392, 1958, 1979, 2505, 2514, 2791 |
| BssT1I | CCWWGG | 2 cut(s) | 1979, 2791 |
| Bst2UI | CCWGG | 2 cut(s) | 394, 2304 |
| Bst4CI | ACNGT | 5 cut(s) | 1289, 1365, 1622, 2861, 2996 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 504, 1048 |
| BstAFI | CTTAAG | 1 cut(s) | 2072 |
| BstBI | TTCGAA | 1 cut(s) | 3002 |
| BstC8I | GCNNGC | 5 cut(s) | 961, 1230, 1878, 2533, 3083 |
| BstDEI | CTNAG | 8 cut(s) | 188, 1501, 1552, 1687, 1790, 2702, 2744, 2808 |
| BstEII | GGTNACC | 1 cut(s) | 2509 |
| BstFNI | CGCG | 2 cut(s) | 531, 2085 |
| BstH2I | RGCGCY | 1 cut(s) | 1276 |
| BstHHI | GCGC | 3 cut(s) | 1275, 2085, 2662 |
| BstMAI | GTCTC | 3 cut(s) | 334, 1519, 3158 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 220, 650, 1792, 1886 |
| BstNI | CCWGG | 2 cut(s) | 394, 2304 |
| BstNSI | RCATGY | 5 cut(s) | 796, 1040, 1445, 2126, 2725 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 381 |
| BstPI | GGTNACC | 1 cut(s) | 2509 |
| BstSCI | CCNGG | 4 cut(s) | 392, 1957, 2302, 2513 |
| BstSFI | CTRYAG | 1 cut(s) | 2992 |
| BstSLI | GKGCMC | 1 cut(s) | 2294 |
| BstUI | CGCG | 2 cut(s) | 531, 2085 |
| BstV1I | GCAGC | 6 cut(s) | 105, 1105, 1746, 2407, 2946, 2949 |
| BstV2I | GAAGAC | 4 cut(s) | 110, 1017, 2339, 2678 |
| BstX2I | RGATCY | 6 cut(s) | 784, 1057, 1327, 1354, 1999, 2097 |
| BstYI | RGATCY | 6 cut(s) | 784, 1057, 1327, 1354, 1999, 2097 |
| BsuI | GTATCC | 1 cut(s) | 1956 |
| BsuRI | GGCC | 2 cut(s) | 548, 3181 |
| BtgZI | GCGATG | 1 cut(s) | 546 |
| BtrI | CACGTC | 1 cut(s) | 2526 |
| BtsI | GCAGTG | 1 cut(s) | 2873 |
| BtsIMutI | CAGTG | 4 cut(s) | 1560, 1721, 2040, 2873 |
| Cac8I | GCNNGC | 5 cut(s) | 961, 1230, 1878, 2533, 3083 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2356 |
| CfoI | GCGC | 3 cut(s) | 1275, 2085, 2662 |
| Cfr10I | RCCGGY | 1 cut(s) | 1598 |
| Cfr13I | GGNCC | 3 cut(s) | 74, 1647, 3180 |
| CpoI | CGGWCCG | 1 cut(s) | 74 |
| CseI | GACGC | 3 cut(s) | 537, 1922, 2896 |
| Csp6I | GTAC | 4 cut(s) | 972, 1445, 1845, 2481 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2956, 2991 |
| CspI | CGGWCCG | 1 cut(s) | 74 |
| CviQI | GTAC | 4 cut(s) | 972, 1445, 1845, 2481 |
| DdeI | CTNAG | 8 cut(s) | 188, 1501, 1552, 1687, 1790, 2702, 2744, 2808 |
| DraI | TTTAAA | 1 cut(s) | 873 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1018 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 504, 1048 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1018 |
| EarI | CTCTTC | 3 cut(s) | 40, 504, 1048 |
| Eco130I | CCWWGG | 2 cut(s) | 1979, 2791 |
| Eco47I | GGWCC | 2 cut(s) | 74, 1647 |
| Eco47III | AGCGCT | 1 cut(s) | 1274 |
| Eco57I | CTGAAG | 5 cut(s) | 294, 1289, 1371, 1697, 2333 |
| Eco88I | CYCGRG | 2 cut(s) | 2101, 2504 |
| Eco91I | GGTNACC | 1 cut(s) | 2509 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1647 |
| EcoO65I | GGTNACC | 1 cut(s) | 2509 |
| EcoRII | CCWGG | 2 cut(s) | 392, 2302 |
| EcoT14I | CCWWGG | 2 cut(s) | 1979, 2791 |
| EcoT22I | ATGCAT | 1 cut(s) | 1485 |
| ErhI | CCWWGG | 2 cut(s) | 1979, 2791 |
| Esp3I | CGTCTC | 1 cut(s) | 3158 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 432, 464, 474, 506 |
| FaqI | GGGAC | 2 cut(s) | 1631, 2487 |
| FauI | CCCGC | 2 cut(s) | 1197, 1869 |
| FauNDI | CATATG | 1 cut(s) | 1193 |
| FbaI | TGATCA | 1 cut(s) | 1609 |
| FblI | GTMKAC | 3 cut(s) | 432, 2875, 2910 |
| Fnu4HI | GCNGC | 7 cut(s) | 119, 319, 1119, 1760, 2396, 2960, 2963 |
| Fsp4HI | GCNGC | 7 cut(s) | 119, 319, 1119, 1760, 2396, 2960, 2963 |
| GlaI | GCGC | 3 cut(s) | 1274, 2084, 2661 |
| GluI | GCNGC | 7 cut(s) | 119, 319, 1119, 1760, 2396, 2960, 2963 |
| GsaI | CCCAGC | 1 cut(s) | 117 |
| GsuI | CTGGAG | 2 cut(s) | 2255, 3140 |
| HaeII | RGCGCY | 1 cut(s) | 1276 |
| HaeIII | GGCC | 2 cut(s) | 548, 3181 |
| HapII | CCGG | 7 cut(s) | 72, 77, 1518, 1599, 1958, 2514, 3076 |
| HgaI | GACGC | 3 cut(s) | 537, 1922, 2896 |
| HhaI | GCGC | 3 cut(s) | 1275, 2085, 2662 |
| Hin6I | GCGC | 3 cut(s) | 1273, 2083, 2660 |
| HinP1I | GCGC | 3 cut(s) | 1273, 2083, 2660 |
| HincII | GTYRAC | 4 cut(s) | 85, 433, 986, 2911 |
| HindII | GTYRAC | 4 cut(s) | 85, 433, 986, 2911 |
| HindIII | AAGCTT | 2 cut(s) | 1709, 2543 |
| HpaII | CCGG | 7 cut(s) | 72, 77, 1518, 1599, 1958, 2514, 3076 |
| HphI | GGTGA | 7 cut(s) | 1475, 1766, 2057, 2102, 2458, 2878, 3025 |
| Hpy166II | GTNNAC | 8 cut(s) | 85, 433, 986, 1845, 2876, 2911, 2927, 3024 |
| Hpy188I | TCNGA | 8 cut(s) | 95, 191, 1150, 1397, 1810, 2493, 2615, 2697 |
| Hpy8I | GTNNAC | 8 cut(s) | 85, 433, 986, 1845, 2876, 2911, 2927, 3024 |
| Hpy99I | CGWCG | 5 cut(s) | 437, 1066, 1369, 2210, 2912 |
| HpyAV | CCTTC | 9 cut(s) | 455, 808, 944, 986, 1051, 2420, 2604, 2741, 3086 |
| HpyCH4III | ACNGT | 5 cut(s) | 1289, 1365, 1622, 2861, 2996 |
| HpyCH4IV | ACGT | 4 cut(s) | 1144, 1865, 2525, 3151 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 220, 650, 1792, 1886 |
| HpyF3I | CTNAG | 8 cut(s) | 188, 1501, 1552, 1687, 1790, 2702, 2744, 2808 |
| HpySE526I | ACGT | 4 cut(s) | 1144, 1865, 2525, 3151 |
| HspAI | GCGC | 3 cut(s) | 1273, 2083, 2660 |
| Kpn2I | TCCGGA | 1 cut(s) | 1517 |
| KpnI | GGTACC | 1 cut(s) | 975 |
| Ksp22I | TGATCA | 1 cut(s) | 1609 |
| LmnI | GCTCC | 2 cut(s) | 23, 126 |
| Lsp1109I | GCAGC | 6 cut(s) | 105, 1105, 1746, 2407, 2946, 2949 |
| LweI | GCATC | 8 cut(s) | 160, 1795, 1825, 1962, 2122, 2164, 2647, 2997 |
| MaeII | ACGT | 4 cut(s) | 1144, 1865, 2525, 3151 |
| MaeIII | GTNAC | 8 cut(s) | 757, 773, 934, 1580, 1742, 2125, 2446, 2509 |
| MfeI | CAATTG | 2 cut(s) | 606, 3061 |
| MflI | RGATCY | 6 cut(s) | 784, 1057, 1327, 1354, 1999, 2097 |
| MhlI | GDGCHC | 2 cut(s) | 1731, 2294 |
| MlyI | GAGTC | 8 cut(s) | 210, 336, 521, 678, 1101, 1544, 1585, 1805 |
| MmeI | TCCRAC | 6 cut(s) | 237, 1518, 2269, 2292, 2638, 2793 |
| Mph1103I | ATGCAT | 1 cut(s) | 1485 |
| MroI | TCCGGA | 1 cut(s) | 1517 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2784 |
| MslI | CAYNNNNRTG | 2 cut(s) | 246, 2160 |
| MspA1I | CMGCKG | 2 cut(s) | 113, 1267 |
| MspCI | CTTAAG | 1 cut(s) | 2072 |
| MspI | CCGG | 7 cut(s) | 72, 77, 1518, 1599, 1958, 2514, 3076 |
| MspR9I | CCNGG | 4 cut(s) | 394, 1959, 2304, 2515 |
| MunI | CAATTG | 2 cut(s) | 606, 3061 |
| Mva1269I | GAATGC | 1 cut(s) | 2519 |
| MvaI | CCWGG | 2 cut(s) | 394, 2304 |
| MvnI | CGCG | 2 cut(s) | 531, 2085 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 220, 650, 1792, 1886 |
| NciI | CCSGG | 2 cut(s) | 1959, 2515 |
| NdeI | CATATG | 1 cut(s) | 1193 |
| NlaIV | GGNNCC | 3 cut(s) | 390, 973, 2458 |
| NmuCI | GTSAC | 5 cut(s) | 757, 934, 1580, 2125, 2446 |
| NsiI | ATGCAT | 1 cut(s) | 1485 |
| NspI | RCATGY | 5 cut(s) | 796, 1040, 1445, 2126, 2725 |
| NspV | TTCGAA | 1 cut(s) | 3002 |
| PacI | TTAATTAA | 1 cut(s) | 2436 |
| PciI | ACATGT | 1 cut(s) | 1441 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 657, 2485 |
| PctI | GAATGC | 1 cut(s) | 2519 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2784 |
| PfeI | GAWTC | 5 cut(s) | 305, 2275, 2579, 2780, 2939 |
| Pfl23II | CGTACG | 1 cut(s) | 2480 |
| PflFI | GACNNNGTC | 1 cut(s) | 668 |
| PkrI | GCNGC | 7 cut(s) | 120, 320, 1120, 1761, 2397, 2961, 2964 |
| PleI | GAGTC | 8 cut(s) | 209, 336, 520, 677, 1101, 1544, 1584, 1805 |
| PpsI | GAGTC | 8 cut(s) | 209, 336, 520, 677, 1101, 1544, 1584, 1805 |
| PpuMI | RGGWCCY | 1 cut(s) | 1647 |
| PscI | ACATGT | 1 cut(s) | 1441 |
| PshAI | GACNNNNGTC | 1 cut(s) | 381 |
| PshBI | ATTAAT | 4 cut(s) | 1922, 2432, 2436, 3111 |
| Psp1406I | AACGTT | 1 cut(s) | 3151 |
| Psp5II | RGGWCCY | 1 cut(s) | 1647 |
| Psp6I | CCWGG | 2 cut(s) | 392, 2302 |
| PspEI | GGTNACC | 1 cut(s) | 2509 |
| PspFI | CCCAGC | 1 cut(s) | 113 |
| PspGI | CCWGG | 2 cut(s) | 392, 2302 |
| PspLI | CGTACG | 1 cut(s) | 2480 |
| PspN4I | GGNNCC | 3 cut(s) | 390, 973, 2458 |
| PspPI | GGNCC | 3 cut(s) | 74, 1647, 3180 |
| PspPPI | RGGWCCY | 1 cut(s) | 1647 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2356 |
| PsuI | RGATCY | 6 cut(s) | 784, 1057, 1327, 1354, 1999, 2097 |
| PsyI | GACNNNGTC | 1 cut(s) | 668 |
| PvuII | CAGCTG | 1 cut(s) | 1267 |
| RsaI | GTAC | 4 cut(s) | 973, 1446, 1846, 2482 |
| RsaNI | GTAC | 4 cut(s) | 972, 1445, 1845, 2481 |
| RseI | CAYNNNNRTG | 2 cut(s) | 246, 2160 |
| Rsr2I | CGGWCCG | 1 cut(s) | 74 |
| RsrII | CGGWCCG | 1 cut(s) | 74 |
| SalI | GTCGAC | 2 cut(s) | 431, 2909 |
| SatI | GCNGC | 7 cut(s) | 119, 319, 1119, 1760, 2396, 2960, 2963 |
| Sau96I | GGNCC | 3 cut(s) | 74, 1647, 3180 |
| SchI | GAGTC | 8 cut(s) | 210, 336, 521, 678, 1101, 1544, 1585, 1805 |
| ScrFI | CCNGG | 4 cut(s) | 394, 1959, 2304, 2515 |
| SduI | GDGCHC | 2 cut(s) | 1731, 2294 |
| SfaNI | GCATC | 8 cut(s) | 160, 1795, 1825, 1962, 2122, 2164, 2647, 2997 |
| SfcI | CTRYAG | 1 cut(s) | 2992 |
| SfuI | TTCGAA | 1 cut(s) | 3002 |
| SinI | GGWCC | 2 cut(s) | 74, 1647 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 246, 2160 |
| SmlI | CTYRAG | 8 cut(s) | 344, 889, 1302, 1730, 2072, 2270, 2417, 2902 |
| SmoI | CTYRAG | 8 cut(s) | 344, 889, 1302, 1730, 2072, 2270, 2417, 2902 |
| SsiI | CCGC | 8 cut(s) | 111, 319, 569, 755, 1204, 1876, 2085, 2986 |
| SspI | AATATT | 2 cut(s) | 1179, 1750 |
| StyD4I | CCNGG | 4 cut(s) | 392, 1957, 2302, 2513 |
| StyI | CCWWGG | 2 cut(s) | 1979, 2791 |
| TaaI | ACNGT | 5 cut(s) | 1289, 1365, 1622, 2861, 2996 |
| TaiI | ACGT | 4 cut(s) | 1147, 1868, 2528, 3154 |
| TaqI | TCGA | 6 cut(s) | 165, 432, 1367, 1373, 2910, 3002 |
| TatI | WGTACW | 1 cut(s) | 1844 |
| TauI | GCSGC | 1 cut(s) | 321 |
| TfiI | GAWTC | 5 cut(s) | 305, 2275, 2579, 2780, 2939 |
| TscAI | CASTG | 4 cut(s) | 1560, 1721, 2047, 2873 |
| TseFI | GTSAC | 5 cut(s) | 757, 934, 1580, 2125, 2446 |
| TseI | GCWGC | 6 cut(s) | 118, 1118, 1759, 2395, 2959, 2962 |
| Tsp45I | GTSAC | 5 cut(s) | 757, 934, 1580, 2125, 2446 |
| TspGWI | ACGGA | 2 cut(s) | 450, 1050 |
| TspRI | CASTG | 4 cut(s) | 1560, 1721, 2047, 2873 |
| Tth111I | GACNNNGTC | 1 cut(s) | 668 |
| Vha464I | CTTAAG | 1 cut(s) | 2072 |
| VpaK11BI | GGWCC | 2 cut(s) | 74, 1647 |
| VspI | ATTAAT | 4 cut(s) | 1922, 2432, 2436, 3111 |
| XapI | RAATTY | 4 cut(s) | 371, 716, 833, 868 |
| XbaI | TCTAGA | 2 cut(s) | 197, 787 |
| XceI | RCATGY | 5 cut(s) | 796, 1040, 1445, 2126, 2725 |
| XmiI | GTMKAC | 3 cut(s) | 432, 2875, 2910 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2784 |
| Zsp2I | ATGCAT | 1 cut(s) | 1485 |