Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 9 - 101 | 2.9e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 176 - 347 | 4e-36 | NB-ARC domain |
| WHD_DRP | PF23559 | 432 - 497 | 3.6e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 561 - 624 | 6e-11 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 571 - 859 | 1.1e-26 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 683 - 807 | 3.5e-36 | R13L1/DRL21 LRRs |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1034 |
| Acc36I | ACCTGC | 1 cut(s) | 1034 |
| Acc65I | GGTACC | 1 cut(s) | 962 |
| AccB1I | GGYRCC | 2 cut(s) | 962, 1046 |
| AccI | GTMKAC | 2 cut(s) | 513, 645 |
| AccII | CGCG | 3 cut(s) | 2079, 2643, 2660 |
| AccIII | TCCGGA | 1 cut(s) | 1502 |
| AciI | CCGC | 7 cut(s) | 108, 560, 746, 1301, 1630, 2079, 2580 |
| AclWI | GGATC | 2 cut(s) | 882, 1052 |
| AcsI | RAATTY | 3 cut(s) | 707, 824, 2627 |
| AcuI | CTGAAG | 5 cut(s) | 27, 291, 1289, 1371, 2051 |
| AfaI | GTAC | 6 cut(s) | 330, 766, 964, 1644, 1742, 1843 |
| AfeI | AGCGCT | 2 cut(s) | 1274, 2433 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 111, 602, 896, 1978, 1979 |
| AflII | CTTAAG | 1 cut(s) | 880 |
| AflIII | ACRYGT | 2 cut(s) | 932, 2690 |
| AjiI | CACGTC | 1 cut(s) | 935 |
| AjnI | CCWGG | 3 cut(s) | 380, 1485, 2293 |
| Alw21I | GWGCWC | 3 cut(s) | 1728, 1998, 2036 |
| Alw26I | GTCTC | 2 cut(s) | 1504, 1941 |
| Alw44I | GTGCAC | 1 cut(s) | 2032 |
| AlwI | GGATC | 2 cut(s) | 882, 1052 |
| Ama87I | CYCGRG | 2 cut(s) | 2095, 2492 |
| Aor13HI | TCCGGA | 1 cut(s) | 1502 |
| Aor51HI | AGCGCT | 2 cut(s) | 1274, 2433 |
| AoxI | GGCC | 1 cut(s) | 537 |
| ApaLI | GTGCAC | 1 cut(s) | 2032 |
| ApeKI | GCWGC | 6 cut(s) | 115, 312, 315, 1118, 1756, 2386 |
| ApoI | RAATTY | 3 cut(s) | 707, 824, 2627 |
| AseI | ATTAAT | 1 cut(s) | 1919 |
| Asp718I | GGTACC | 1 cut(s) | 962 |
| AspLEI | GCGC | 4 cut(s) | 1275, 2079, 2434, 2662 |
| AspS9I | GGNCC | 2 cut(s) | 1632, 1676 |
| AsuC2I | CCSGG | 1 cut(s) | 1587 |
| AsuHPI | GGTGA | 4 cut(s) | 1763, 2051, 2201, 2254 |
| AvaI | CYCGRG | 2 cut(s) | 2095, 2492 |
| AvaII | GGWCC | 2 cut(s) | 1632, 1676 |
| BaeGI | GKGCMC | 2 cut(s) | 2036, 2285 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 320, 353 |
| BanI | GGYRCC | 2 cut(s) | 962, 1046 |
| BanII | GRGCYC | 1 cut(s) | 1998 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 466, 498, 1344, 1376 |
| BbsI | GAAGAC | 3 cut(s) | 107, 481, 1382 |
| Bbv12I | GWGCWC | 3 cut(s) | 1728, 1998, 2036 |
| BbvI | GCAGC | 6 cut(s) | 102, 324, 327, 1105, 1743, 2398 |
| BccI | CCATC | 9 cut(s) | 55, 283, 557, 687, 776, 1161, 1339, 1972, 2639 |
| BceAI | ACGGC | 1 cut(s) | 2699 |
| BciT130I | CCWGG | 3 cut(s) | 382, 1487, 2295 |
| BcnI | CCSGG | 1 cut(s) | 1587 |
| BcoDI | GTCTC | 2 cut(s) | 1504, 1941 |
| BfaI | CTAG | 8 cut(s) | 195, 507, 1418, 1761, 1889, 2024, 2316, 2597 |
| BfmI | CTRYAG | 1 cut(s) | 1053 |
| BfoI | RGCGCY | 2 cut(s) | 1276, 2435 |
| BfrI | CTTAAG | 1 cut(s) | 880 |
| BfuAI | ACCTGC | 1 cut(s) | 1034 |
| BglII | AGATCT | 2 cut(s) | 1327, 1354 |
| BisI | GCNGC | 6 cut(s) | 116, 313, 316, 1119, 1757, 2387 |
| BlsI | GCNGC | 6 cut(s) | 117, 314, 317, 1120, 1758, 2388 |
| Bme1390I | CCNGG | 4 cut(s) | 382, 1487, 1587, 2295 |
| Bme18I | GGWCC | 2 cut(s) | 1632, 1676 |
| BmeT110I | CYCGRG | 2 cut(s) | 2095, 2492 |
| BmgBI | CACGTC | 1 cut(s) | 935 |
| BmgT120I | GGNCC | 2 cut(s) | 1632, 1676 |
| BmiI | GGNNCC | 3 cut(s) | 378, 964, 1048 |
| BmrFI | CCNGG | 4 cut(s) | 382, 1487, 1587, 2295 |
| BmsI | GCATC | 5 cut(s) | 157, 1792, 1956, 2116, 2158 |
| BoxI | GACNNNNGTC | 1 cut(s) | 369 |
| BpiI | GAAGAC | 3 cut(s) | 107, 481, 1382 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 12, 44 |
| BpmI | CTGGAG | 3 cut(s) | 410, 1654, 2246 |
| BpuEI | CTTGAG | 2 cut(s) | 317, 2429 |
| BpuMI | CCSGG | 1 cut(s) | 1587 |
| BsaJI | CCNNGG | 5 cut(s) | 91, 380, 1585, 1973, 2493 |
| BsaWI | WCCGGW | 2 cut(s) | 73, 1502 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1484, 1514, 2382, 2412 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 111, 602, 896, 1978, 1979 |
| Bse1I | ACTGG | 2 cut(s) | 577, 2041 |
| BseAI | TCCGGA | 1 cut(s) | 1502 |
| BseBI | CCWGG | 3 cut(s) | 382, 1487, 2295 |
| BseDI | CCNNGG | 5 cut(s) | 91, 380, 1585, 1973, 2493 |
| BseGI | GGATG | 8 cut(s) | 66, 87, 262, 529, 568, 1350, 1983, 2161 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 111, 602, 896, 1978, 1979 |
| BseMII | CTCAG | 5 cut(s) | 199, 987, 1551, 2471, 2693 |
| BseNI | ACTGG | 2 cut(s) | 577, 2041 |
| BseRI | GAGGAG | 2 cut(s) | 188, 2579 |
| BseSI | GKGCMC | 2 cut(s) | 2036, 2285 |
| BseXI | GCAGC | 6 cut(s) | 102, 324, 327, 1105, 1743, 2398 |
| BseYI | CCCAGC | 2 cut(s) | 110, 2663 |
| BsgI | GTGCAG | 1 cut(s) | 21 |
| Bsh1236I | CGCG | 3 cut(s) | 2079, 2643, 2660 |
| BshFI | GGCC | 1 cut(s) | 539 |
| BshNI | GGYRCC | 2 cut(s) | 962, 1046 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1728, 1998, 2036 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2095, 2492 |
| BsiSI | CCGG | 3 cut(s) | 74, 1503, 1587 |
| BslFI | GGGAC | 3 cut(s) | 1616, 2475, 2518 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 111, 602, 896, 1978, 1979 |
| BsmAI | GTCTC | 2 cut(s) | 1504, 1941 |
| BsmFI | GGGAC | 3 cut(s) | 1616, 2475, 2518 |
| BsnI | GGCC | 1 cut(s) | 539 |
| BsoBI | CYCGRG | 2 cut(s) | 2095, 2492 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1728, 1998, 2036, 2285 |
| Bsp13I | TCCGGA | 1 cut(s) | 1502 |
| Bsp143I | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| Bsp68I | TCGCGA | 1 cut(s) | 2643 |
| BspACI | CCGC | 7 cut(s) | 108, 560, 746, 1301, 1630, 2079, 2580 |
| BspANI | GGCC | 1 cut(s) | 539 |
| BspCNI | CTCAG | 5 cut(s) | 198, 988, 1550, 2472, 2694 |
| BspEI | TCCGGA | 1 cut(s) | 1502 |
| BspFNI | CGCG | 3 cut(s) | 2079, 2643, 2660 |
| BspHI | TCATGA | 3 cut(s) | 355, 937, 1480 |
| BspLI | GGNNCC | 3 cut(s) | 378, 964, 1048 |
| BspMAI | CTGCAG | 1 cut(s) | 1057 |
| BspMI | ACCTGC | 1 cut(s) | 1034 |
| BspPI | GGATC | 2 cut(s) | 882, 1052 |
| BspT107I | GGYRCC | 2 cut(s) | 962, 1046 |
| BspTI | CTTAAG | 1 cut(s) | 880 |
| BsrI | ACTGG | 2 cut(s) | 577, 2041 |
| BssECI | CCNNGG | 5 cut(s) | 91, 380, 1585, 1973, 2493 |
| BssMI | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| BssNAI | GTATAC | 1 cut(s) | 514 |
| BssT1I | CCWWGG | 1 cut(s) | 1973 |
| Bst1107I | GTATAC | 1 cut(s) | 514 |
| Bst2UI | CCWGG | 3 cut(s) | 382, 1487, 2295 |
| Bst4CI | ACNGT | 5 cut(s) | 856, 1289, 1365, 1607, 2440 |
| Bst6I | CTCTTC | 2 cut(s) | 37, 495 |
| BstAFI | CTTAAG | 1 cut(s) | 880 |
| BstC8I | GCNNGC | 4 cut(s) | 952, 1230, 2114, 2521 |
| BstDEI | CTNAG | 9 cut(s) | 185, 996, 1537, 1684, 1787, 2448, 2474, 2480, 2702 |
| BstF5I | GGATG | 8 cut(s) | 66, 87, 262, 529, 568, 1350, 1983, 2161 |
| BstFNI | CGCG | 3 cut(s) | 2079, 2643, 2660 |
| BstH2I | RGCGCY | 2 cut(s) | 1276, 2435 |
| BstHHI | GCGC | 4 cut(s) | 1275, 2079, 2434, 2662 |
| BstKTI | GATC | 9 cut(s) | 877, 921, 1060, 1309, 1330, 1357, 1417, 2311, 2676 |
| BstMAI | GTCTC | 2 cut(s) | 1504, 1941 |
| BstMBI | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 217, 1563, 1789, 2659 |
| BstNI | CCWGG | 3 cut(s) | 382, 1487, 2295 |
| BstNSI | RCATGY | 5 cut(s) | 787, 1031, 2120, 2558, 2694 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 369 |
| BstSCI | CCNGG | 4 cut(s) | 380, 1485, 1585, 2293 |
| BstSFI | CTRYAG | 1 cut(s) | 1053 |
| BstSLI | GKGCMC | 2 cut(s) | 2036, 2285 |
| BstUI | CGCG | 3 cut(s) | 2079, 2643, 2660 |
| BstV1I | GCAGC | 6 cut(s) | 102, 324, 327, 1105, 1743, 2398 |
| BstV2I | GAAGAC | 3 cut(s) | 107, 481, 1382 |
| BstX2I | RGATCY | 4 cut(s) | 874, 1057, 1327, 1354 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 388, 1236 |
| BstYI | RGATCY | 4 cut(s) | 874, 1057, 1327, 1354 |
| BstZ17I | GTATAC | 1 cut(s) | 514 |
| BsuRI | GGCC | 1 cut(s) | 539 |
| BtgZI | GCGATG | 1 cut(s) | 2658 |
| BtrI | CACGTC | 1 cut(s) | 935 |
| BtsCI | GGATG | 8 cut(s) | 66, 87, 262, 529, 568, 1350, 1983, 2161 |
| BtsI | GCAGTG | 1 cut(s) | 1050 |
| BtsIMutI | CAGTG | 3 cut(s) | 1050, 1545, 2034 |
| BtuMI | TCGCGA | 1 cut(s) | 2643 |
| BveI | ACCTGC | 1 cut(s) | 1034 |
| Cac8I | GCNNGC | 4 cut(s) | 952, 1230, 2114, 2521 |
| CciI | TCATGA | 3 cut(s) | 355, 937, 1480 |
| CfoI | GCGC | 4 cut(s) | 1275, 2079, 2434, 2662 |
| Cfr13I | GGNCC | 2 cut(s) | 1632, 1676 |
| CseI | GACGC | 2 cut(s) | 1919, 2666 |
| Csp6I | GTAC | 6 cut(s) | 329, 765, 963, 1643, 1741, 1842 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1556, 1591 |
| CviQI | GTAC | 6 cut(s) | 329, 765, 963, 1643, 1741, 1842 |
| DdeI | CTNAG | 9 cut(s) | 185, 996, 1537, 1684, 1787, 2448, 2474, 2480, 2702 |
| DpnI | GATC | 9 cut(s) | 876, 920, 1059, 1308, 1329, 1356, 1416, 2310, 2675 |
| DpnII | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| Eam1104I | CTCTTC | 2 cut(s) | 37, 495 |
| EarI | CTCTTC | 2 cut(s) | 37, 495 |
| Ecl136II | GAGCTC | 1 cut(s) | 1996 |
| Eco130I | CCWWGG | 1 cut(s) | 1973 |
| Eco24I | GRGCYC | 1 cut(s) | 1998 |
| Eco32I | GATATC | 1 cut(s) | 1656 |
| Eco47I | GGWCC | 2 cut(s) | 1632, 1676 |
| Eco47III | AGCGCT | 2 cut(s) | 1274, 2433 |
| Eco53kI | GAGCTC | 1 cut(s) | 1996 |
| Eco57I | CTGAAG | 5 cut(s) | 27, 291, 1289, 1371, 2051 |
| Eco88I | CYCGRG | 2 cut(s) | 2095, 2492 |
| EcoICRI | GAGCTC | 1 cut(s) | 1996 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1676 |
| EcoRII | CCWGG | 3 cut(s) | 380, 1485, 2293 |
| EcoRV | GATATC | 1 cut(s) | 1656 |
| EcoT14I | CCWWGG | 1 cut(s) | 1973 |
| EcoT22I | ATGCAT | 1 cut(s) | 1470 |
| EcoT38I | GRGCYC | 1 cut(s) | 1998 |
| ErhI | CCWWGG | 1 cut(s) | 1973 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 420, 452 |
| FaqI | GGGAC | 3 cut(s) | 1616, 2475, 2518 |
| FauNDI | CATATG | 2 cut(s) | 1193, 1311 |
| FblI | GTMKAC | 2 cut(s) | 513, 645 |
| Fnu4HI | GCNGC | 6 cut(s) | 116, 313, 316, 1119, 1757, 2387 |
| FokI | GGATG | 8 cut(s) | 73, 74, 269, 536, 575, 1357, 1990, 2168 |
| FriOI | GRGCYC | 1 cut(s) | 1998 |
| Fsp4HI | GCNGC | 6 cut(s) | 116, 313, 316, 1119, 1757, 2387 |
| FspBI | CTAG | 8 cut(s) | 195, 507, 1418, 1761, 1889, 2024, 2316, 2597 |
| GlaI | GCGC | 4 cut(s) | 1274, 2078, 2433, 2661 |
| GluI | GCNGC | 6 cut(s) | 116, 313, 316, 1119, 1757, 2387 |
| GsaI | CCCAGC | 2 cut(s) | 114, 2667 |
| GsuI | CTGGAG | 3 cut(s) | 410, 1654, 2246 |
| HaeII | RGCGCY | 2 cut(s) | 1276, 2435 |
| HaeIII | GGCC | 1 cut(s) | 539 |
| HapII | CCGG | 3 cut(s) | 74, 1503, 1587 |
| HgaI | GACGC | 2 cut(s) | 1919, 2666 |
| HhaI | GCGC | 4 cut(s) | 1275, 2079, 2434, 2662 |
| Hin6I | GCGC | 4 cut(s) | 1273, 2077, 2432, 2660 |
| HinP1I | GCGC | 4 cut(s) | 1273, 2077, 2432, 2660 |
| HincII | GTYRAC | 3 cut(s) | 82, 421, 977 |
| HindII | GTYRAC | 3 cut(s) | 82, 421, 977 |
| HindIII | AAGCTT | 2 cut(s) | 2471, 2531 |
| HpaII | CCGG | 3 cut(s) | 74, 1503, 1587 |
| HphI | GGTGA | 4 cut(s) | 1763, 2051, 2201, 2254 |
| Hpy166II | GTNNAC | 7 cut(s) | 82, 421, 514, 646, 977, 1842, 2034 |
| Hpy188I | TCNGA | 9 cut(s) | 92, 188, 703, 997, 1150, 1269, 1397, 2481, 2697 |
| Hpy8I | GTNNAC | 7 cut(s) | 82, 421, 514, 646, 977, 1842, 2034 |
| Hpy99I | CGWCG | 2 cut(s) | 1369, 2201 |
| HpyAV | CCTTC | 8 cut(s) | 513, 799, 977, 1042, 1669, 2348, 2411, 2463 |
| HpyCH4III | ACNGT | 5 cut(s) | 856, 1289, 1365, 1607, 2440 |
| HpyCH4IV | ACGT | 1 cut(s) | 934 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 217, 1563, 1789, 2659 |
| HpyF3I | CTNAG | 9 cut(s) | 185, 996, 1537, 1684, 1787, 2448, 2474, 2480, 2702 |
| HpySE526I | ACGT | 1 cut(s) | 934 |
| HspAI | GCGC | 4 cut(s) | 1273, 2077, 2432, 2660 |
| Kpn2I | TCCGGA | 1 cut(s) | 1502 |
| KpnI | GGTACC | 1 cut(s) | 966 |
| Kzo9I | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| LmnI | GCTCC | 5 cut(s) | 20, 123, 1673, 2001, 2429 |
| Lsp1109I | GCAGC | 6 cut(s) | 102, 324, 327, 1105, 1743, 2398 |
| LweI | GCATC | 5 cut(s) | 157, 1792, 1956, 2116, 2158 |
| MaeI | CTAG | 8 cut(s) | 195, 507, 1418, 1761, 1889, 2024, 2316, 2597 |
| MaeII | ACGT | 1 cut(s) | 934 |
| MaeIII | GTNAC | 7 cut(s) | 748, 856, 925, 1579, 1824, 2119, 2189 |
| MalI | GATC | 9 cut(s) | 876, 920, 1059, 1308, 1329, 1356, 1416, 2310, 2675 |
| MboI | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| MfeI | CAATTG | 1 cut(s) | 597 |
| MflI | RGATCY | 4 cut(s) | 874, 1057, 1327, 1354 |
| MhlI | GDGCHC | 4 cut(s) | 1728, 1998, 2036, 2285 |
| MlyI | GAGTC | 6 cut(s) | 207, 512, 669, 1101, 1529, 1570 |
| MmeI | TCCRAC | 5 cut(s) | 234, 1375, 1503, 2260, 2283 |
| Mph1103I | ATGCAT | 1 cut(s) | 1470 |
| MroI | TCCGGA | 1 cut(s) | 1502 |
| MslI | CAYNNNNRTG | 4 cut(s) | 243, 942, 2154, 2559 |
| MspA1I | CMGCKG | 1 cut(s) | 110 |
| MspCI | CTTAAG | 1 cut(s) | 880 |
| MspI | CCGG | 3 cut(s) | 74, 1503, 1587 |
| MspR9I | CCNGG | 4 cut(s) | 382, 1487, 1587, 2295 |
| MunI | CAATTG | 1 cut(s) | 597 |
| MvaI | CCWGG | 3 cut(s) | 382, 1487, 2295 |
| MvnI | CGCG | 3 cut(s) | 2079, 2643, 2660 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 217, 1563, 1789, 2659 |
| NciI | CCSGG | 1 cut(s) | 1587 |
| NdeI | CATATG | 2 cut(s) | 1193, 1311 |
| NdeII | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| NlaIV | GGNNCC | 3 cut(s) | 378, 964, 1048 |
| NmuCI | GTSAC | 6 cut(s) | 748, 856, 925, 1579, 2119, 2189 |
| NruI | TCGCGA | 1 cut(s) | 2643 |
| NsiI | ATGCAT | 1 cut(s) | 1470 |
| NspI | RCATGY | 5 cut(s) | 787, 1031, 2120, 2558, 2694 |
| PagI | TCATGA | 3 cut(s) | 355, 937, 1480 |
| PaqCI | CACCTGC | 1 cut(s) | 1034 |
| PciI | ACATGT | 1 cut(s) | 2690 |
| PfeI | GAWTC | 7 cut(s) | 302, 385, 394, 1649, 1883, 2567, 2576 |
| PflFI | GACNNNGTC | 1 cut(s) | 659 |
| PkrI | GCNGC | 6 cut(s) | 117, 314, 317, 1120, 1758, 2388 |
| PleI | GAGTC | 6 cut(s) | 206, 511, 668, 1101, 1529, 1569 |
| PpsI | GAGTC | 6 cut(s) | 206, 511, 668, 1101, 1529, 1569 |
| PpuMI | RGGWCCY | 1 cut(s) | 1676 |
| PscI | ACATGT | 1 cut(s) | 2690 |
| PshAI | GACNNNNGTC | 1 cut(s) | 369 |
| PshBI | ATTAAT | 1 cut(s) | 1919 |
| Psp124BI | GAGCTC | 1 cut(s) | 1998 |
| Psp5II | RGGWCCY | 1 cut(s) | 1676 |
| Psp6I | CCWGG | 3 cut(s) | 380, 1485, 2293 |
| PspFI | CCCAGC | 2 cut(s) | 110, 2663 |
| PspGI | CCWGG | 3 cut(s) | 380, 1485, 2293 |
| PspN4I | GGNNCC | 3 cut(s) | 378, 964, 1048 |
| PspPI | GGNCC | 2 cut(s) | 1632, 1676 |
| PspPPI | RGGWCCY | 1 cut(s) | 1676 |
| PstI | CTGCAG | 1 cut(s) | 1057 |
| PsuI | RGATCY | 4 cut(s) | 874, 1057, 1327, 1354 |
| PsyI | GACNNNGTC | 1 cut(s) | 659 |
| RruI | TCGCGA | 1 cut(s) | 2643 |
| RsaI | GTAC | 6 cut(s) | 330, 766, 964, 1644, 1742, 1843 |
| RsaNI | GTAC | 6 cut(s) | 329, 765, 963, 1643, 1741, 1842 |
| RseI | CAYNNNNRTG | 4 cut(s) | 243, 942, 2154, 2559 |
| SacI | GAGCTC | 1 cut(s) | 1998 |
| SatI | GCNGC | 6 cut(s) | 116, 313, 316, 1119, 1757, 2387 |
| Sau3AI | GATC | 9 cut(s) | 874, 918, 1057, 1306, 1327, 1354, 1414, 2308, 2673 |
| Sau96I | GGNCC | 2 cut(s) | 1632, 1676 |
| SchI | GAGTC | 6 cut(s) | 207, 512, 669, 1101, 1529, 1570 |
| ScrFI | CCNGG | 4 cut(s) | 382, 1487, 1587, 2295 |
| SduI | GDGCHC | 4 cut(s) | 1728, 1998, 2036, 2285 |
| SfaNI | GCATC | 5 cut(s) | 157, 1792, 1956, 2116, 2158 |
| SfcI | CTRYAG | 1 cut(s) | 1053 |
| SinI | GGWCC | 2 cut(s) | 1632, 1676 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 243, 942, 2154, 2559 |
| SmlI | CTYRAG | 3 cut(s) | 332, 880, 2408 |
| SmoI | CTYRAG | 3 cut(s) | 332, 880, 2408 |
| SsiI | CCGC | 7 cut(s) | 108, 560, 746, 1301, 1630, 2079, 2580 |
| SspI | AATATT | 3 cut(s) | 1159, 1747, 2613 |
| SspMI | CTAG | 8 cut(s) | 195, 507, 1418, 1761, 1889, 2024, 2316, 2597 |
| SstI | GAGCTC | 1 cut(s) | 1998 |
| StyD4I | CCNGG | 4 cut(s) | 380, 1485, 1585, 2293 |
| StyI | CCWWGG | 1 cut(s) | 1973 |
| TaaI | ACNGT | 5 cut(s) | 856, 1289, 1365, 1607, 2440 |
| TaiI | ACGT | 1 cut(s) | 937 |
| TaqI | TCGA | 6 cut(s) | 162, 663, 1367, 1652, 2052, 2685 |
| TatI | WGTACW | 1 cut(s) | 1841 |
| TfiI | GAWTC | 7 cut(s) | 302, 385, 394, 1649, 1883, 2567, 2576 |
| TscAI | CASTG | 3 cut(s) | 1057, 1545, 2041 |
| TseFI | GTSAC | 6 cut(s) | 748, 856, 925, 1579, 2119, 2189 |
| TseI | GCWGC | 6 cut(s) | 115, 312, 315, 1118, 1756, 2386 |
| Tsp45I | GTSAC | 6 cut(s) | 748, 856, 925, 1579, 2119, 2189 |
| TspGWI | ACGGA | 2 cut(s) | 531, 1050 |
| TspRI | CASTG | 3 cut(s) | 1057, 1545, 2041 |
| Tth111I | GACNNNGTC | 1 cut(s) | 659 |
| Vha464I | CTTAAG | 1 cut(s) | 880 |
| VneI | GTGCAC | 1 cut(s) | 2032 |
| VpaK11BI | GGWCC | 2 cut(s) | 1632, 1676 |
| VspI | ATTAAT | 1 cut(s) | 1919 |
| XapI | RAATTY | 3 cut(s) | 707, 824, 2627 |
| XbaI | TCTAGA | 1 cut(s) | 194 |
| XceI | RCATGY | 5 cut(s) | 787, 1031, 2120, 2558, 2694 |
| XmiI | GTMKAC | 2 cut(s) | 513, 645 |
| XspI | CTAG | 8 cut(s) | 195, 507, 1418, 1761, 1889, 2024, 2316, 2597 |
| Zsp2I | ATGCAT | 1 cut(s) | 1470 |