pycom03g09810

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
8577799 .. 8580293
2495 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g09810.1

Sequence Viewer

Length: 1047 bp
ATGGAAGCCGAAGAACGAGCTGGAGCTAGCTCAAGTAAAGTACAACAGAAAGATTCTTTAAACTTGGAAGCAGGTCCTCGACACATAATCTCACAAACACTACCTTCAACTTCTTTGGTTGAAGACTCTGATGTGTATGGAAGAAATGAGGACAAGGAGACCTTCATTAGATTATTGCTAGCCGATGATGTTGACAACAAGATAGGTGTGATTCCCATTGTGGGAATGGGTGGGATCGGAAAGACCACCCTCGCTCAGTTCTTATACGACGATGTTGGAGTGAGGCAACATTTTGAGCTCCGGGCATGGGTTTGTGTTTCGGAAGAATTTGATGTACAAACTTGTGGAAGTAAGATCATTGTTACTACCCGGAATGAACGCGTTGCATCTGTGAAGGGTACTTTTGATGCCCACCGTCTGATGCAAATATCTGAGAATGACTGTTGGTTGTTGTTTGCAAAACATACGTTCAAAGATGCACGTGTTAGTGGAAATCCAAATCTTGAAGTGATCGGAAGACCAATCATTAGCAAGTGCAGAGGCCTTCCTTTAGCTGCAAAATCGCTTGGAGGTCTTTTACGATCTGAACGGGATGCAGAGGAATGGGAGAGTGTACTAAAGAGTGACATCTGGGATACAGAGTGTACAATTCTGCCTGCTCTATGGCTAAGCTACCACTACTTGCCTCCCCATCTCAAGCGTTGTTTTGCCTATTGTTCTGTTTTCCCCAAAGACCACGAATTCTGCAAGCAGGAATTTGTTTTGCAGTGGATGGCTGAAGATCTTGTACAACCCCAAAAGAAGAAAACAATGAAGGAAGTTGGAGAGATAACATTAGGGCAGCTACCGTCCCTTTTAGAGCTTGAAATCGATGGGCTGAATGGAGCGGAATCAGTAGGTTCTGAATTTTATGGTGGCATAGGCACCAAACCTGCATTTACATCTCTGGAGGTTTTGAAATTCAGAAATATGCGGAAGTGGCAACATTGGAGTGAAGAGAACGACGAGTTCTACAGTTTCGATCAAGCTTTGCTGTTGGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

349

Amino Acids

39.35

Weight (kDa)

5.11

Isoelectric Point (pI)

43.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 58 - 112 1.3e-10 NB-ARC domain
WHD_DRP PF23559 241 - 282 2.9e-10 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 62, 940
AccB1I GGYRCC 1 cut(s) 923
AccBSI CCGCTC 1 cut(s) 887
AccII CGCG 1 cut(s) 381
AciI CCGC 2 cut(s) 887, 973
AclWI GGATC 1 cut(s) 242
AcsI RAATTY 5 cut(s) 326, 740, 755, 905, 959
AcuI CTGAAG 1 cut(s) 798
AcvI CACGTG 1 cut(s) 482
AfaI GTAC 6 cut(s) 42, 336, 400, 615, 646, 789
AfiI CCNNNNNNNGG 2 cut(s) 221, 307
AflIII ACRYGT 2 cut(s) 379, 481
AgsI TTSAA 6 cut(s) 108, 122, 472, 506, 866, 958
AluBI AGCT 9 cut(s) 20, 26, 30, 298, 554, 672, 844, 862, 1028
AluI AGCT 9 cut(s) 20, 26, 30, 298, 554, 672, 844, 862, 1028
Alw21I GWGCWC 1 cut(s) 300
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 1 cut(s) 242
AoxI GGCC 1 cut(s) 541
ApeKI GCWGC 2 cut(s) 554, 841
ApoI RAATTY 5 cut(s) 326, 740, 755, 905, 959
AspS9I GGNCC 1 cut(s) 74
AsuC2I CCSGG 2 cut(s) 302, 370
AsuNHI GCTAGC 2 cut(s) 26, 178
AvaII GGWCC 1 cut(s) 74
BanI GGYRCC 1 cut(s) 923
BanII GRGCYC 1 cut(s) 300
BarI GAAGNNNNNNTAC 2 cut(s) 771, 803
BbrPI CACGTG 1 cut(s) 482
BbsI GAAGAC 2 cut(s) 129, 523
Bbv12I GWGCWC 1 cut(s) 300
BbvI GCAGC 2 cut(s) 541, 853
BccI CCATC 3 cut(s) 699, 766, 866
BciVI GTATCC 1 cut(s) 628
BcnI CCSGG 2 cut(s) 302, 370
BcoDI GTCTC 1 cut(s) 152
BfaI CTAG 2 cut(s) 27, 179
BfmI CTRYAG 1 cut(s) 1012
BfuAI ACCTGC 2 cut(s) 62, 940
BfuI GTATCC 1 cut(s) 628
BglII AGATCT 1 cut(s) 781
BisI GCNGC 2 cut(s) 555, 842
BlpI GCTNAGC 1 cut(s) 668
BlsI GCNGC 2 cut(s) 556, 843
Bme1390I CCNGG 2 cut(s) 302, 370
Bme18I GGWCC 1 cut(s) 74
BmgT120I GGNCC 1 cut(s) 74
BmiI GGNNCC 1 cut(s) 925
BmrFI CCNGG 2 cut(s) 302, 370
BmsI GCATC 5 cut(s) 395, 397, 411, 466, 583
BmtI GCTAGC 2 cut(s) 30, 182
BpiI GAAGAC 2 cut(s) 129, 523
BpmI CTGGAG 2 cut(s) 42, 968
Bpu1102I GCTNAGC 1 cut(s) 668
BpuEI CTTGAG 2 cut(s) 16, 680
BpuMI CCSGG 2 cut(s) 302, 370
Bsa29I ATCGAT 1 cut(s) 870
BsaAI YACGTR 1 cut(s) 482
BsaI GGTCTC 1 cut(s) 152
Bsc4I CCNNNNNNNGG 2 cut(s) 221, 307
BseCI ATCGAT 1 cut(s) 870
BseGI GGATG 2 cut(s) 598, 777
BseLI CCNNNNNNNGG 2 cut(s) 221, 307
BseMII CTCAG 2 cut(s) 269, 423
BseXI GCAGC 2 cut(s) 541, 853
BsgI GTGCAG 1 cut(s) 556
Bsh1236I CGCG 1 cut(s) 381
BshFI GGCC 1 cut(s) 543
BshNI GGYRCC 1 cut(s) 923
BshVI ATCGAT 1 cut(s) 870
BsiHKAI GWGCWC 1 cut(s) 300
BsiSI CCGG 2 cut(s) 301, 370
BslFI GGGAC 1 cut(s) 835
BslI CCNNNNNNNGG 2 cut(s) 221, 307
BsmAI GTCTC 1 cut(s) 152
BsmFI GGGAC 1 cut(s) 835
BsnI GGCC 1 cut(s) 543
Bso31I GGTCTC 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 300
Bsp1407I TGTACA 3 cut(s) 334, 644, 787
Bsp143I GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
Bsp1720I GCTNAGC 1 cut(s) 668
BspACI CCGC 2 cut(s) 887, 973
BspANI GGCC 1 cut(s) 543
BspCNI CTCAG 2 cut(s) 268, 424
BspDI ATCGAT 1 cut(s) 870
BspFNI CGCG 1 cut(s) 381
BspLI GGNNCC 1 cut(s) 925
BspMI ACCTGC 2 cut(s) 62, 940
BspOI GCTAGC 2 cut(s) 30, 182
BspPI GGATC 1 cut(s) 242
BspT107I GGYRCC 1 cut(s) 923
BspTNI GGTCTC 1 cut(s) 152
BsrBI CCGCTC 1 cut(s) 887
BsrGI TGTACA 3 cut(s) 334, 644, 787
BssMI GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
Bst4CI ACNGT 4 cut(s) 416, 443, 849, 1016
Bst6I CTCTTC 1 cut(s) 990
BstAUI TGTACA 3 cut(s) 334, 644, 787
BstBAI YACGTR 1 cut(s) 482
BstC8I GCNNGC 4 cut(s) 28, 180, 657, 749
BstDEI CTNAG 3 cut(s) 255, 432, 668
BstF5I GGATG 2 cut(s) 598, 777
BstFNI CGCG 1 cut(s) 381
BstKTI GATC 6 cut(s) 237, 357, 513, 584, 784, 1024
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
BstMWI GCNNNNNNNGC 1 cut(s) 979
BstSCI CCNGG 2 cut(s) 300, 368
BstSFI CTRYAG 1 cut(s) 1012
BstUI CGCG 1 cut(s) 381
BstV1I GCAGC 2 cut(s) 541, 853
BstV2I GAAGAC 2 cut(s) 129, 523
BstX2I RGATCY 1 cut(s) 781
BstYI RGATCY 1 cut(s) 781
Bsu15I ATCGAT 1 cut(s) 870
BsuI GTATCC 1 cut(s) 628
BsuRI GGCC 1 cut(s) 543
BsuTUI ATCGAT 1 cut(s) 870
BtsCI GGATG 2 cut(s) 598, 777
BtsI GCAGTG 1 cut(s) 773
BtsIMutI CAGTG 1 cut(s) 773
BveI ACCTGC 2 cut(s) 62, 940
Cac8I GCNNGC 4 cut(s) 28, 180, 657, 749
Cfr13I GGNCC 1 cut(s) 74
ClaI ATCGAT 1 cut(s) 870
Csp6I GTAC 6 cut(s) 41, 335, 399, 614, 645, 788
CviAII CATG 1 cut(s) 306
CviQI GTAC 6 cut(s) 41, 335, 399, 614, 645, 788
DdeI CTNAG 3 cut(s) 255, 432, 668
DpnI GATC 6 cut(s) 236, 356, 512, 583, 783, 1023
DpnII GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
DraI TTTAAA 1 cut(s) 60
Eam1104I CTCTTC 1 cut(s) 990
EarI CTCTTC 1 cut(s) 990
Ecl136II GAGCTC 1 cut(s) 298
Eco147I AGGCCT 1 cut(s) 543
Eco24I GRGCYC 1 cut(s) 300
Eco31I GGTCTC 1 cut(s) 152
Eco47I GGWCC 1 cut(s) 74
Eco53kI GAGCTC 1 cut(s) 298
Eco57I CTGAAG 1 cut(s) 798
Eco72I CACGTG 1 cut(s) 482
EcoICRI GAGCTC 1 cut(s) 298
EcoO109I RGGNCCY 1 cut(s) 74
EcoRI GAATTC 1 cut(s) 740
EcoT38I GRGCYC 1 cut(s) 300
FaeI CATG 1 cut(s) 309
FaiI YATR 9 cut(s) 86, 138, 265, 307, 465, 664, 912, 920, 971
FalI AAGNNNNNCTT 2 cut(s) 146, 178
FaqI GGGAC 1 cut(s) 835
FatI CATG 1 cut(s) 305
Fnu4HI GCNGC 2 cut(s) 555, 842
FokI GGATG 2 cut(s) 605, 784
FriOI GRGCYC 1 cut(s) 300
Fsp4HI GCNGC 2 cut(s) 555, 842
FspBI CTAG 2 cut(s) 27, 179
GluI GCNGC 2 cut(s) 555, 842
GsuI CTGGAG 2 cut(s) 42, 968
HaeIII GGCC 1 cut(s) 543
HapII CCGG 2 cut(s) 301, 370
Hin1II CATG 1 cut(s) 309
HincII GTYRAC 1 cut(s) 193
HindII GTYRAC 1 cut(s) 193
HindIII AAGCTT 1 cut(s) 1026
HinfI GANTC 4 cut(s) 53, 125, 211, 890
HpaII CCGG 2 cut(s) 301, 370
Hpy166II GTNNAC 3 cut(s) 193, 614, 645
Hpy188I TCNGA 9 cut(s) 130, 239, 322, 420, 433, 515, 586, 904, 965
Hpy188III TCNNGA 2 cut(s) 503, 947
Hpy8I GTNNAC 3 cut(s) 193, 614, 645
Hpy99I CGWCG 2 cut(s) 272, 1007
HpyAV CCTTC 5 cut(s) 114, 172, 388, 554, 808
HpyCH4III ACNGT 4 cut(s) 416, 443, 849, 1016
HpyCH4IV ACGT 2 cut(s) 467, 481
HpyF10VI GCNNNNNNNGC 1 cut(s) 979
HpyF3I CTNAG 3 cut(s) 255, 432, 668
HpySE526I ACGT 2 cut(s) 467, 481
Hsp92II CATG 1 cut(s) 309
Kzo9I GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
LmnI GCTCC 3 cut(s) 23, 303, 884
LpnPI CCDG 9 cut(s) 6, 57, 314, 383, 616, 669, 737, 932, 945
Lsp1109I GCAGC 2 cut(s) 541, 853
LweI GCATC 5 cut(s) 395, 397, 411, 466, 583
MaeI CTAG 2 cut(s) 27, 179
MaeII ACGT 2 cut(s) 467, 481
MaeIII GTNAC 2 cut(s) 361, 623
MalI GATC 6 cut(s) 236, 356, 512, 583, 783, 1023
MbiI CCGCTC 1 cut(s) 887
MboI GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
MboII GAAGA 8 cut(s) 23, 134, 153, 335, 528, 791, 814, 1007
MflI RGATCY 1 cut(s) 781
MhlI GDGCHC 1 cut(s) 300
MluCI AATT 6 cut(s) 326, 648, 740, 755, 905, 959
MluI ACGCGT 1 cut(s) 379
MlyI GAGTC 1 cut(s) 119
MmeI TCCRAC 3 cut(s) 256, 802, 1017
MnlI CCTC 9 cut(s) 87, 142, 260, 276, 533, 563, 592, 696, 943
MseI TTAA 1 cut(s) 59
MslI CAYNNNNRTG 1 cut(s) 990
MspI CCGG 2 cut(s) 301, 370
MspR9I CCNGG 2 cut(s) 302, 370
MvnI CGCG 1 cut(s) 381
MwoI GCNNNNNNNGC 1 cut(s) 979
NciI CCSGG 2 cut(s) 302, 370
NdeII GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
NheI GCTAGC 2 cut(s) 26, 178
NlaIII CATG 1 cut(s) 309
NlaIV GGNNCC 1 cut(s) 925
NmuCI GTSAC 1 cut(s) 623
PceI AGGCCT 1 cut(s) 543
PfeI GAWTC 3 cut(s) 53, 211, 890
PkrI GCNGC 2 cut(s) 556, 843
PleI GAGTC 1 cut(s) 119
PmaCI CACGTG 1 cut(s) 482
PmlI CACGTG 1 cut(s) 482
PpsI GAGTC 1 cut(s) 119
Ppu21I YACGTR 1 cut(s) 482
PpuMI RGGWCCY 1 cut(s) 74
Psp124BI GAGCTC 1 cut(s) 300
Psp5II RGGWCCY 1 cut(s) 74
PspCI CACGTG 1 cut(s) 482
PspN4I GGNNCC 1 cut(s) 925
PspPI GGNCC 1 cut(s) 74
PspPPI RGGWCCY 1 cut(s) 74
PsuI RGATCY 1 cut(s) 781
RsaI GTAC 6 cut(s) 42, 336, 400, 615, 646, 789
RsaNI GTAC 6 cut(s) 41, 335, 399, 614, 645, 788
RseI CAYNNNNRTG 1 cut(s) 990
SacI GAGCTC 1 cut(s) 300
SaqAI TTAA 1 cut(s) 59
SatI GCNGC 2 cut(s) 555, 842
Sau3AI GATC 6 cut(s) 234, 354, 510, 581, 781, 1021
Sau96I GGNCC 1 cut(s) 74
SchI GAGTC 1 cut(s) 119
ScrFI CCNGG 2 cut(s) 302, 370
SduI GDGCHC 1 cut(s) 300
SfaNI GCATC 5 cut(s) 395, 397, 411, 466, 583
SfcI CTRYAG 1 cut(s) 1012
SinI GGWCC 1 cut(s) 74
SmiMI CAYNNNNRTG 1 cut(s) 990
SmlI CTYRAG 2 cut(s) 31, 695
SmoI CTYRAG 2 cut(s) 31, 695
Sse9I AATT 6 cut(s) 326, 648, 740, 755, 905, 959
SseBI AGGCCT 1 cut(s) 543
SsiI CCGC 2 cut(s) 887, 973
SspMI CTAG 2 cut(s) 27, 179
SstI GAGCTC 1 cut(s) 300
StuI AGGCCT 1 cut(s) 543
StyD4I CCNGG 2 cut(s) 300, 368
TaaI ACNGT 4 cut(s) 416, 443, 849, 1016
TaiI ACGT 2 cut(s) 470, 484
TaqI TCGA 3 cut(s) 79, 870, 1020
TasI AATT 6 cut(s) 326, 648, 740, 755, 905, 959
TatI WGTACW 5 cut(s) 40, 334, 613, 644, 787
TfiI GAWTC 3 cut(s) 53, 211, 890
Tru1I TTAA 1 cut(s) 59
Tru9I TTAA 1 cut(s) 59
TscAI CASTG 1 cut(s) 773
TseFI GTSAC 1 cut(s) 623
TseI GCWGC 2 cut(s) 554, 841
Tsp45I GTSAC 1 cut(s) 623
TspDTI ATGAA 3 cut(s) 154, 390, 827
TspRI CASTG 1 cut(s) 773
VpaK11BI GGWCC 1 cut(s) 74
XapI RAATTY 5 cut(s) 326, 740, 755, 905, 959
XcmI CCANNNNNNNNNTGG 1 cut(s) 223
XspI CTAG 2 cut(s) 27, 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.