RchiOBHm_Chr1g0346241

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
38399467 .. 38410001
10535 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57251

Sequence Viewer

Length: 3033 bp
ATGGAACCCGAATCTGGAAGTAGCACGAGTGAGGTACAAGACCTCAACTCTAGTCTTCCATTTCATGGTTTTGATTCAGCATCAATATACCGGAGGGCAGAGGAAGTTCCTGAAAGACTAGACTCCATTAAGAAGCGGATAATAGATGTCTTGGGTATGCAAGCAAGTGCTGGACACGGGGTATCACAAACAATACAGTCAACTTCTTTGGTAGAAAAGTCTGTATATGGAAGAGATGAAGAGAAAGAAACATTGGTTAAATTGTTGCTATCAGATGATGAGAGTGGCAATGAGATAAGTGTGATTCCTATTGTGGGTATGGGTGGGATCGGAAAGACCACCCTTGCCCAGTTTGTATACAACGATGTTAGACTCAAGGAACGTTTTGACATCAAAGCATGGGCTTGTGTTTCAAAAGAATTTGATGTTCTTCGGATCTCACAACAAATTTATGAGTCCCTCACCAAAAAAGCTTGCAAGATCACGACCCTTAATGTGCTTCAATCAGAGTTGCAGGCAACTTTGAGGGGGAAAAGGTTCTTCTTTGTTCTTGATGACATGTGGAACAAGAATTATAACCAGTTGGAATTCTTAATGCGTCCCCTTGACTCTGGAGCACATGGAAGCAAGATTATTGTCACAACACGCGATGAAGATGTTACACGTAAGATGGGTAGCCTTGAAGCTCACCGTCTCACGCCAATGTCCGAGCAAGATAGCTGGTCGTTATTTGAAAAACATGCCTTCAAAAATGCAGGTGTTAGTGCACGCTCACATCTTAAACCAATCGGTAGACAAATTGTTCGAAAGTGCAAGGGTCTTCCTTTGGCTATTAAGTCCCTTGCGGGTCTCTTATGTTCTAAATTAAATGTGGGTGAATGGTTAACTATATTGAACAGTGACCTGTGGGAGTTGCCTTTGGAGAGTGACATTCTGCCATCTCTTTGGTTGAGCTATATGTACCTGCCTTCACAACTCAAACATTGTTTTGCATATTGTTCGATATTTCCCAAGAACTATGCGTTCAAAACATCAGAATTGGTTTACTTGTGGATGGCTGAAGATCTATTGCAACCTGAAAAACACAAAACTGCAGAAAAAATCGGACAAGATTACTTCAATGATCTAATCTCAATGTCATTTTTTCAAGTTTCATCAAGGTCCGATCAATATATCATGCATGACCTTATCAATGATTTAGCAAGCTTTGTATCAGGAGAATTTTGTTTTAGGTGGGAGGGCAGTGATTCACCCAACAATTTGAGCAAGACTCGTCACTTTTCATGTATGTTGGGATGTTTTACTACAGAGGCTGATAGCCTAGAGATGTTTGAGGCTTTACAGCAAGCTAAACGTTTGCACACCTTTCTACCATTAGATCCATATTTGAAAGGACTCTACGAGGCATTGCCAAAGTTTCAATGTTTAAGAATGCTCAAGTTATCATGTTACGATATTCAGGAATTGCCTGAGTCAATTAACAACTTGAAACATCTTAAGCACTTGGACTTGTCTCACAGTTCCATCGAAAAGTTACCTGATGCAATTTGTACTTTGTATAACTTGCAAGTATTGTTGTTGTCAAACTGTGAAGACCTTACTGAACTGCCAGCCAACTTGGGAAGATTGATCAACTTGAGCCATCTGGATATTACAGGGATAGTGTTACAAAAGATGCCACCACAAATGGGTAAGTTGAAAGACCTCCAGATGCTACCAAATTTCGTGCTAGACAAACACACGGGGGATAATTTGGCAGAGTTAAAGGAGCTTGAAAAATTGCGTGGAAGACTTTATATCTGGGGGCTTGGGCATAGCAGCGGTTTGGAGGCCTACATACTGAGGGACAAGATGTTTCTTAAGGAACTGGTTTTGGATTGGGAAGAAGAGGAGGAAACAGAAGAAGAAAAGTCAAGTGAAGAGGGCGATTATACTATAGAAGAAAGAGAAGTGCTTGAGAAGCTCCAACCTCACCGGAACCTGGAAATGCTTACAATTACAGATTATGGAGGCAAAATGTTTCCAGGTTGGTCAGGATATTATTCTTCCGCTGCTCTTGTTTATCTTGAGCTTGGTAATTGTGTGAATTGTATCTCCTTGCCACCGTTGGGACAGCTACCTTCCCTCACAGTGCTTCGTATAGTAGATTTACATGGAGTGGTATCCATAGGTTCTGAATTCTATTATGGTGACGGCAATACTTCTAGTGTGAATAAACCATTTAGATCCCTACGGTCTTTAGAATTCATGGGTATGAGGGGGTGGAAAGAATGGTATTATGTTGGAGGTGACAATAATGAAGGTGGGGTTTTTCCTAATCTTGAGAAGCTTGTTGTGACAATTTGTCCCAATCTTACCGGGAGATTAGCGTCAGACAGCCTCCCATCTCTTGAGTCTTTGACGGTATATAATTGCCCAGAATTGGAATGTATTCCGGAAGATGGATTCCCGTCAAAGTTAAAAACACTTCACATCGTCAAAGTTAAAAAAGTGAATGCAAAGAGTATGCAGAATCTGAACAAGGATCTCCGAACACTCACCTCTCTTGAAATATTGAAACTTGACTTTAACTGCGACGAAAAAGTAGATTGGTTTGCAGAGGAGCACGAGGGGCTGTTTCCCAGCACTCTCACACATCTCAAGATCGGCCGTCTGAATTGTGAGACCATCGACGGCGCCAAGTGGTTTGGCCATCTCAACTCTCTTCGAAGCTTGGGGATTACGAATTGTCCTGCGCTCCGGTGCTTGCCAGATAGTGGACTACCCTCTTCTCTTCAACGCTTGGAGATTTACAACTGCCCTGCGCTCCGGTGCTTGCCAGATAGTGGGCTACCCACTTCCCTTCAAAGCTTGGAGATTGTGGATTGCCCTGCTCTGCAGTGCTTGCCAGATAGTGGACTACCCTCTTCTCTTTCTCATCTAGGTATCAATCGATGTCCTTTGCTTCAGGAACGGTGCCAAAGAGAGACGGGTGAAGATTGGCCCAAGATTGCTCACATCAAGCGCATAGAGATCAATGGGTTTCGGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1010

Amino Acids

114.26

Weight (kDa)

5.51

Isoelectric Point (pI)

51.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 80 - 251 2.3e-37 NB-ARC domain
WHD_DRP PF23559 335 - 401 2e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 468 - 803 5.8e-28 Leucine-rich repeat region
LRR_8 PF13855 476 - 530 1.2e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 585 - 716 4.8e-28 R13L1/DRL21 LRRs
LRR_R13L1-DRL21 PF25019 821 - 933 7.4e-07 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 576
AarI CACCTGC 1 cut(s) 746
Acc36I ACCTGC 2 cut(s) 746, 972
AccB1I GGYRCC 2 cut(s) 2675, 2955
AccB7I CCANNNNNTGG 4 cut(s) 65, 2756, 2825, 2894
AccI GTMKAC 2 cut(s) 357, 793
AccII CGCG 1 cut(s) 648
AccIII TCCGGA 1 cut(s) 2434
AciI CCGC 4 cut(s) 136, 845, 1821, 2049
AclI AACGTT 2 cut(s) 382, 1354
AclWI GGATC 5 cut(s) 335, 443, 1373, 2220, 2532
AcoI YGGCCR 2 cut(s) 2647, 2689
AcsI RAATTY 7 cut(s) 419, 447, 587, 1220, 1720, 2177, 2243
AcuI CTGAAG 2 cut(s) 1080, 2930
AcyI GRCGYC 1 cut(s) 2676
AfaI GTAC 3 cut(s) 36, 962, 1552
AflII CTTAAG 2 cut(s) 1496, 1859
AflIII ACRYGT 2 cut(s) 558, 662
AhdI GACNNNNNGTC 1 cut(s) 2343
AjnI CCWGG 2 cut(s) 1980, 2023
AjuI GAANNNNNNNTTGG 2 cut(s) 236, 268
Alw21I GWGCWC 3 cut(s) 619, 769, 2607
Alw26I GTCTC 5 cut(s) 698, 854, 1518, 2657, 2960
Alw44I GTGCAC 1 cut(s) 765
AlwI GGATC 5 cut(s) 335, 443, 1373, 2220, 2532
AlwNI CAGNNNCTG 2 cut(s) 1313, 2515
Aor13HI TCCGGA 1 cut(s) 2434
AoxI GGCC 4 cut(s) 1830, 2647, 2689, 2981
ApaLI GTGCAC 1 cut(s) 765
ApeKI GCWGC 2 cut(s) 1818, 2051
ApoI RAATTY 7 cut(s) 419, 447, 587, 1220, 1720, 2177, 2243
ArsI GACNNNNNNTTYG 2 cut(s) 786, 818
Asp700I GAANNNNTTC 2 cut(s) 536, 2430
AspLEI GCGC 4 cut(s) 2678, 2737, 2806, 3006
AspS9I GGNCC 2 cut(s) 1161, 2982
AsuC2I CCSGG 1 cut(s) 2359
AsuHPI GGTGA 9 cut(s) 454, 680, 887, 1242, 1964, 2201, 2300, 2530, 2984
AsuII TTCGAA 2 cut(s) 805, 2707
AvaII GGWCC 1 cut(s) 1161
BaeGI GKGCMC 1 cut(s) 769
BalI TGGCCA 1 cut(s) 2691
BanI GGYRCC 2 cut(s) 2675, 2955
BauI CACGAG 2 cut(s) 25, 2606
BbsI GAAGAC 4 cut(s) 47, 812, 1599, 1795
Bbv12I GWGCWC 3 cut(s) 619, 769, 2607
BbvI GCAGC 2 cut(s) 1830, 2038
BccI CCATC 9 cut(s) 664, 946, 1048, 1532, 1650, 2392, 2435, 2675, 2700
BceAI ACGGC 3 cut(s) 2209, 2634, 2689
BcgI CGANNNNNNTGC 2 cut(s) 981, 1015
BciT130I CCWGG 2 cut(s) 1982, 2025
BciVI GTATCC 1 cut(s) 2173
BclI TGATCA 1 cut(s) 1629
BcnI CCSGG 1 cut(s) 2359
BcoDI GTCTC 5 cut(s) 698, 854, 1518, 2657, 2960
BfaI CTAG 6 cut(s) 51, 119, 1322, 1730, 2205, 2921
BfmI CTRYAG 4 cut(s) 1092, 1305, 1935, 2876
BfoI RGCGCY 1 cut(s) 2679
BfrI CTTAAG 2 cut(s) 1496, 1859
BfuAI ACCTGC 2 cut(s) 746, 972
BfuI GTATCC 1 cut(s) 2173
BglII AGATCT 1 cut(s) 1063
BisI GCNGC 2 cut(s) 1819, 2052
BlsI GCNGC 2 cut(s) 1820, 2053
Bme1390I CCNGG 3 cut(s) 1982, 2025, 2359
Bme18I GGWCC 1 cut(s) 1161
BmeRI GACNNNNNGTC 1 cut(s) 2343
BmgT120I GGNCC 2 cut(s) 1161, 2982
BmiI GGNNCC 4 cut(s) 6, 1979, 2677, 2957
BmrFI CCNGG 3 cut(s) 1982, 2025, 2359
BmrI ACTGGG 1 cut(s) 343
BmsI GCATC 4 cut(s) 89, 1531, 1665, 1701
BmuI ACTGGG 1 cut(s) 343
BpiI GAAGAC 4 cut(s) 47, 812, 1599, 1795
BplI GAGNNNNNCTC 2 cut(s) 1255, 1287
BpmI CTGGAG 2 cut(s) 633, 1691
Bpu14I TTCGAA 2 cut(s) 805, 2707
BpuEI CTTGAG 8 cut(s) 359, 1421, 1657, 1976, 2087, 2342, 2411, 2624
BpuMI CCSGG 1 cut(s) 2359
Bsa29I ATCGAT 1 cut(s) 2932
BsaAI YACGTR 1 cut(s) 665
BsaHI GRCGYC 1 cut(s) 2676
BsaI GGTCTC 2 cut(s) 854, 2657
BsaWI WCCGGW 5 cut(s) 90, 1974, 2434, 2739, 2808
Bse1I ACTGG 3 cut(s) 349, 580, 1872
Bse3DI GCAATG 2 cut(s) 295, 1406
BseAI TCCGGA 1 cut(s) 2434
BseBI CCWGG 2 cut(s) 1982, 2025
BseCI ATCGAT 1 cut(s) 2932
BseGI GGATG 2 cut(s) 1059, 1301
BseMI GCAATG 2 cut(s) 295, 1406
BseMII CTCAG 2 cut(s) 1461, 1832
BseNI ACTGG 3 cut(s) 349, 580, 1872
BseRI GAGGAG 2 cut(s) 1904, 2615
BseSI GKGCMC 1 cut(s) 769
BseX3I CGGCCG 1 cut(s) 2647
BseXI GCAGC 2 cut(s) 1830, 2038
BseYI CCCAGC 1 cut(s) 2621
Bsh1236I CGCG 1 cut(s) 648
Bsh1285I CGRYCG 1 cut(s) 2650
BshFI GGCC 4 cut(s) 1832, 2649, 2691, 2983
BshNI GGYRCC 2 cut(s) 2675, 2955
BshVI ATCGAT 1 cut(s) 2932
BsiEI CGRYCG 1 cut(s) 2650
BsiHKAI GWGCWC 3 cut(s) 619, 769, 2607
BsiSI CCGG 6 cut(s) 91, 1975, 2358, 2435, 2740, 2809
BslFI GGGAC 6 cut(s) 442, 585, 823, 1859, 2124, 2331
BsmAI GTCTC 5 cut(s) 698, 854, 1518, 2657, 2960
BsmBI CGTCTC 2 cut(s) 698, 2960
BsmFI GGGAC 6 cut(s) 442, 585, 823, 1859, 2124, 2331
BsmI GAATGC 2 cut(s) 1437, 2500
BsnI GGCC 4 cut(s) 1832, 2649, 2691, 2983
Bso31I GGTCTC 2 cut(s) 854, 2657
Bsp119I TTCGAA 2 cut(s) 805, 2707
Bsp1286I GDGCHC 3 cut(s) 619, 769, 2607
Bsp13I TCCGGA 1 cut(s) 2434
BspACI CCGC 4 cut(s) 136, 845, 1821, 2049
BspANI GGCC 4 cut(s) 1832, 2649, 2691, 2983
BspCNI CTCAG 2 cut(s) 1462, 1833
BspDI ATCGAT 1 cut(s) 2932
BspEI TCCGGA 1 cut(s) 2434
BspFNI CGCG 1 cut(s) 648
BspLI GGNNCC 4 cut(s) 6, 1979, 2677, 2957
BspMAI CTGCAG 2 cut(s) 1096, 2880
BspMI ACCTGC 2 cut(s) 746, 972
BspPI GGATC 5 cut(s) 335, 443, 1373, 2220, 2532
BspT104I TTCGAA 2 cut(s) 805, 2707
BspT107I GGYRCC 2 cut(s) 2675, 2955
BspTI CTTAAG 2 cut(s) 1496, 1859
BspTNI GGTCTC 2 cut(s) 854, 2657
BsrDI GCAATG 2 cut(s) 295, 1406
BsrI ACTGG 3 cut(s) 349, 580, 1872
BssNAI GTATAC 1 cut(s) 358
BssNI GRCGYC 1 cut(s) 2676
BssSI CACGAG 2 cut(s) 25, 2606
Bst1107I GTATAC 1 cut(s) 358
Bst2BI CACGAG 2 cut(s) 25, 2606
Bst2UI CCWGG 2 cut(s) 1982, 2025
Bst6I CTCTTC 8 cut(s) 226, 234, 1881, 1914, 2709, 2773, 2778, 2911
BstACI GRCGYC 1 cut(s) 2676
BstAFI CTTAAG 2 cut(s) 1496, 1859
BstAPI GCANNNNNTGC 1 cut(s) 2884
BstBAI YACGTR 1 cut(s) 665
BstBI TTCGAA 2 cut(s) 805, 2707
BstDEI CTNAG 2 cut(s) 1470, 1841
BstF5I GGATG 2 cut(s) 1059, 1301
BstFNI CGCG 1 cut(s) 648
BstH2I RGCGCY 1 cut(s) 2679
BstHHI GCGC 4 cut(s) 2678, 2737, 2806, 3006
BstMAI GTCTC 5 cut(s) 698, 854, 1518, 2657, 2960
BstMCI CGRYCG 1 cut(s) 2650
BstMWI GCNNNNNNNGC 3 cut(s) 1960, 2611, 2884
BstNI CCWGG 2 cut(s) 1982, 2025
BstNSI RCATGY 2 cut(s) 562, 743
BstSCI CCNGG 3 cut(s) 1980, 2023, 2357
BstSFI CTRYAG 4 cut(s) 1092, 1305, 1935, 2876
BstSLI GKGCMC 1 cut(s) 769
BstUI CGCG 1 cut(s) 648
BstV1I GCAGC 2 cut(s) 1830, 2038
BstV2I GAAGAC 4 cut(s) 47, 812, 1599, 1795
BstX2I RGATCY 5 cut(s) 435, 1063, 1378, 2225, 2524
BstXI CCANNNNNNTGG 1 cut(s) 945
BstYI RGATCY 5 cut(s) 435, 1063, 1378, 2225, 2524
BstZ17I GTATAC 1 cut(s) 358
BstZI CGGCCG 1 cut(s) 2647
Bsu15I ATCGAT 1 cut(s) 2932
BsuI GTATCC 1 cut(s) 2173
BsuRI GGCC 4 cut(s) 1832, 2649, 2691, 2983
BsuTUI ATCGAT 1 cut(s) 2932
BtgZI GCGATG 1 cut(s) 663
BtsCI GGATG 2 cut(s) 1059, 1301
BtsI GCAGTG 2 cut(s) 1249, 2885
BtsIMutI CAGTG 4 cut(s) 904, 1249, 2136, 2885
BveI ACCTGC 2 cut(s) 746, 972
CaiI CAGNNNCTG 2 cut(s) 1313, 2515
CfoI GCGC 4 cut(s) 2678, 2737, 2806, 3006
Cfr13I GGNCC 2 cut(s) 1161, 2982
ClaI ATCGAT 1 cut(s) 2932
CseI GACGC 2 cut(s) 587, 2358
Csp6I GTAC 3 cut(s) 35, 961, 1551
CviQI GTAC 3 cut(s) 35, 961, 1551
DdeI CTNAG 2 cut(s) 1470, 1841
DinI GGCGCC 1 cut(s) 2677
DriI GACNNNNNGTC 1 cut(s) 2343
EaeI YGGCCR 2 cut(s) 2647, 2689
EagI CGGCCG 1 cut(s) 2647
Eam1104I CTCTTC 8 cut(s) 226, 234, 1881, 1914, 2709, 2773, 2778, 2911
Eam1105I GACNNNNNGTC 1 cut(s) 2343
EarI CTCTTC 8 cut(s) 226, 234, 1881, 1914, 2709, 2773, 2778, 2911
EclXI CGGCCG 1 cut(s) 2647
Eco147I AGGCCT 1 cut(s) 1832
Eco31I GGTCTC 2 cut(s) 854, 2657
Eco47I GGWCC 1 cut(s) 1161
Eco52I CGGCCG 1 cut(s) 2647
Eco57I CTGAAG 2 cut(s) 1080, 2930
EcoRI GAATTC 3 cut(s) 587, 2177, 2243
EcoRII CCWGG 2 cut(s) 1980, 2023
EcoT22I ATGCAT 1 cut(s) 1182
EgeI GGCGCC 1 cut(s) 2677
EheI GGCGCC 1 cut(s) 2677
Esp3I CGTCTC 2 cut(s) 698, 2960
FaqI GGGAC 6 cut(s) 442, 585, 823, 1859, 2124, 2331
FauI CCCGC 1 cut(s) 838
FbaI TGATCA 1 cut(s) 1629
FblI GTMKAC 2 cut(s) 357, 793
Fnu4HI GCNGC 2 cut(s) 1819, 2052
FokI GGATG 2 cut(s) 1066, 1308
Fsp4HI GCNGC 2 cut(s) 1819, 2052
FspBI CTAG 6 cut(s) 51, 119, 1322, 1730, 2205, 2921
GlaI GCGC 4 cut(s) 2677, 2736, 2805, 3005
GluI GCNGC 2 cut(s) 1819, 2052
GsaI CCCAGC 1 cut(s) 2625
GsuI CTGGAG 2 cut(s) 633, 1691
HaeII RGCGCY 1 cut(s) 2679
HaeIII GGCC 4 cut(s) 1832, 2649, 2691, 2983
HapII CCGG 6 cut(s) 91, 1975, 2358, 2435, 2740, 2809
HgaI GACGC 2 cut(s) 587, 2358
HhaI GCGC 4 cut(s) 2678, 2737, 2806, 3006
Hin1I GRCGYC 1 cut(s) 2676
Hin6I GCGC 4 cut(s) 2676, 2735, 2804, 3004
HinP1I GCGC 4 cut(s) 2676, 2735, 2804, 3004
HincII GTYRAC 2 cut(s) 201, 885
HindII GTYRAC 2 cut(s) 201, 885
HindIII AAGCTT 5 cut(s) 471, 1204, 2327, 2710, 2848
HpaI GTTAAC 1 cut(s) 885
HpaII CCGG 6 cut(s) 91, 1975, 2358, 2435, 2740, 2809
HphI GGTGA 9 cut(s) 454, 680, 887, 1242, 1964, 2201, 2300, 2530, 2984
Hpy166II GTNNAC 8 cut(s) 201, 358, 767, 794, 885, 1045, 2759, 2897
Hpy8I GTNNAC 8 cut(s) 201, 358, 767, 794, 885, 1045, 2759, 2897
Hpy99I CGWCG 2 cut(s) 2579, 2675
HpyAV CCTTC 5 cut(s) 754, 978, 2130, 2294, 2852
HpyCH4IV ACGT 3 cut(s) 382, 664, 1354
HpyF10VI GCNNNNNNNGC 3 cut(s) 1960, 2611, 2884
HpyF3I CTNAG 2 cut(s) 1470, 1841
HpySE526I ACGT 3 cut(s) 382, 664, 1354
Hsp92I GRCGYC 1 cut(s) 2676
HspAI GCGC 4 cut(s) 2676, 2735, 2804, 3004
KasI GGCGCC 1 cut(s) 2675
Kpn2I TCCGGA 1 cut(s) 2434
Ksp22I TGATCA 1 cut(s) 1629
KspAI GTTAAC 1 cut(s) 885
LmnI GCTCC 6 cut(s) 614, 1768, 1968, 2602, 2742, 2811
Lsp1109I GCAGC 2 cut(s) 1830, 2038
LweI GCATC 4 cut(s) 89, 1531, 1665, 1701
MaeI CTAG 6 cut(s) 51, 119, 1322, 1730, 2205, 2921
MaeII ACGT 3 cut(s) 382, 664, 1354
MflI RGATCY 5 cut(s) 435, 1063, 1378, 2225, 2524
MhlI GDGCHC 3 cut(s) 619, 769, 2607
MlsI TGGCCA 1 cut(s) 2691
MluNI TGGCCA 1 cut(s) 2691
Mly113I GGCGCC 1 cut(s) 2676
MlyI GAGTC 8 cut(s) 116, 366, 464, 602, 1264, 1389, 1481, 2402
MmeI TCCRAC 3 cut(s) 564, 1990, 2263
Mox20I TGGCCA 1 cut(s) 2691
Mph1103I ATGCAT 1 cut(s) 1182
MroI TCCGGA 1 cut(s) 2434
MroXI GAANNNNTTC 2 cut(s) 536, 2430
MscI TGGCCA 1 cut(s) 2691
MslI CAYNNNNRTG 2 cut(s) 701, 2252
Msp20I TGGCCA 1 cut(s) 2691
MspA1I CMGCKG 2 cut(s) 1821, 2051
MspCI CTTAAG 2 cut(s) 1496, 1859
MspI CCGG 6 cut(s) 91, 1975, 2358, 2435, 2740, 2809
MspR9I CCNGG 3 cut(s) 1982, 2025, 2359
Mva1269I GAATGC 2 cut(s) 1437, 2500
MvaI CCWGG 2 cut(s) 1982, 2025
MvnI CGCG 1 cut(s) 648
MwoI GCNNNNNNNGC 3 cut(s) 1960, 2611, 2884
NarI GGCGCC 1 cut(s) 2676
NciI CCSGG 1 cut(s) 2359
NlaIV GGNNCC 4 cut(s) 6, 1979, 2677, 2957
NmuCI GTSAC 7 cut(s) 637, 899, 926, 1274, 2189, 2288, 2335
NsiI ATGCAT 1 cut(s) 1182
NspI RCATGY 2 cut(s) 562, 743
NspV TTCGAA 2 cut(s) 805, 2707
PaqCI CACCTGC 1 cut(s) 746
PceI AGGCCT 1 cut(s) 1832
PciI ACATGT 1 cut(s) 558
PctI GAATGC 2 cut(s) 1437, 2500
PdmI GAANNNNTTC 2 cut(s) 536, 2430
PfeI GAWTC 6 cut(s) 11, 74, 304, 1247, 2445, 2512
PflMI CCANNNNNTGG 4 cut(s) 65, 2756, 2825, 2894
PkrI GCNGC 2 cut(s) 1820, 2053
PleI GAGTC 8 cut(s) 116, 366, 463, 602, 1264, 1389, 1480, 2401
PluTI GGCGCC 1 cut(s) 2679
PpsI GAGTC 8 cut(s) 116, 366, 463, 602, 1264, 1389, 1480, 2401
Ppu21I YACGTR 1 cut(s) 665
PscI ACATGT 1 cut(s) 558
PsiI TTATAA 1 cut(s) 576
Psp1406I AACGTT 2 cut(s) 382, 1354
Psp6I CCWGG 2 cut(s) 1980, 2023
PspFI CCCAGC 1 cut(s) 2621
PspGI CCWGG 2 cut(s) 1980, 2023
PspN4I GGNNCC 4 cut(s) 6, 1979, 2677, 2957
PspPI GGNCC 2 cut(s) 1161, 2982
PstI CTGCAG 2 cut(s) 1096, 2880
PstNI CAGNNNCTG 2 cut(s) 1313, 2515
PsuI RGATCY 5 cut(s) 435, 1063, 1378, 2225, 2524
RsaI GTAC 3 cut(s) 36, 962, 1552
RsaNI GTAC 3 cut(s) 35, 961, 1551
RseI CAYNNNNRTG 2 cut(s) 701, 2252
SatI GCNGC 2 cut(s) 1819, 2052
Sau96I GGNCC 2 cut(s) 1161, 2982
SchI GAGTC 8 cut(s) 116, 366, 464, 602, 1264, 1389, 1481, 2402
ScrFI CCNGG 3 cut(s) 1982, 2025, 2359
SduI GDGCHC 3 cut(s) 619, 769, 2607
SfaNI GCATC 4 cut(s) 89, 1531, 1665, 1701
SfcI CTRYAG 4 cut(s) 1092, 1305, 1935, 2876
SfoI GGCGCC 1 cut(s) 2677
SfuI TTCGAA 2 cut(s) 805, 2707
SinI GGWCC 1 cut(s) 1161
SmiMI CAYNNNNRTG 2 cut(s) 701, 2252
SseBI AGGCCT 1 cut(s) 1832
SsiI CCGC 4 cut(s) 136, 845, 1821, 2049
SspDI GGCGCC 1 cut(s) 2675
SspI AATATT 1 cut(s) 2553
SspMI CTAG 6 cut(s) 51, 119, 1322, 1730, 2205, 2921
StuI AGGCCT 1 cut(s) 1832
StyD4I CCNGG 3 cut(s) 1980, 2023, 2357
TaiI ACGT 3 cut(s) 385, 667, 1357
TaqI TCGA 6 cut(s) 805, 1001, 1527, 2670, 2707, 2932
TatI WGTACW 1 cut(s) 1550
TfiI GAWTC 6 cut(s) 11, 74, 304, 1247, 2445, 2512
TscAI CASTG 4 cut(s) 904, 1249, 2136, 2885
TseFI GTSAC 7 cut(s) 637, 899, 926, 1274, 2189, 2288, 2335
TseI GCWGC 2 cut(s) 1818, 2051
Tsp45I GTSAC 7 cut(s) 637, 899, 926, 1274, 2189, 2288, 2335
TspDTI ATGAA 7 cut(s) 53, 252, 666, 1143, 1272, 2236, 2313
TspRI CASTG 4 cut(s) 904, 1249, 2136, 2885
Van91I CCANNNNNTGG 4 cut(s) 65, 2756, 2825, 2894
Vha464I CTTAAG 2 cut(s) 1496, 1859
VneI GTGCAC 1 cut(s) 765
VpaK11BI GGWCC 1 cut(s) 1161
XapI RAATTY 7 cut(s) 419, 447, 587, 1220, 1720, 2177, 2243
XceI RCATGY 2 cut(s) 562, 743
XmiI GTMKAC 2 cut(s) 357, 793
XmnI GAANNNNTTC 2 cut(s) 536, 2430
XspI CTAG 6 cut(s) 51, 119, 1322, 1730, 2205, 2921
Zsp2I ATGCAT 1 cut(s) 1182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.