Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 11 - 101 | 1.1e-17 | Rx N-terminal domain |
| NB-ARC | PF00931 | 177 - 348 | 2e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 503 | 1.7e-25 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 572 - 869 | 4.1e-29 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 688 - 815 | 1.2e-39 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2130 |
| Acc65I | GGTACC | 1 cut(s) | 965 |
| AccB1I | GGYRCC | 1 cut(s) | 965 |
| AccI | GTMKAC | 3 cut(s) | 648, 2869, 2904 |
| AccII | CGCG | 1 cut(s) | 2094 |
| AciI | CCGC | 9 cut(s) | 111, 563, 749, 1265, 1611, 2094, 2304, 2379, 2986 |
| AclI | AACGTT | 1 cut(s) | 3145 |
| AclWI | GGATC | 2 cut(s) | 885, 1338 |
| AcsI | RAATTY | 4 cut(s) | 710, 827, 2653, 3048 |
| AcuI | CTGAAG | 7 cut(s) | 294, 1292, 1374, 1706, 1736, 2066, 3084 |
| AfaI | GTAC | 8 cut(s) | 333, 967, 1449, 1682, 1686, 1855, 2613, 2822 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 114, 605, 1991, 2160, 2792, 2948, 3086 |
| AflII | CTTAAG | 1 cut(s) | 883 |
| AflIII | ACRYGT | 2 cut(s) | 935, 1444 |
| AjiI | CACGTC | 1 cut(s) | 938 |
| AjnI | CCWGG | 3 cut(s) | 383, 2247, 2317 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2159, 2191 |
| AleI | CACNNNNGTG | 1 cut(s) | 1461 |
| Alw21I | GWGCWC | 1 cut(s) | 1740 |
| Alw26I | GTCTC | 5 cut(s) | 803, 1522, 2144, 2693, 3152 |
| AlwI | GGATC | 2 cut(s) | 885, 1338 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 334 |
| Ama87I | CYCGRG | 2 cut(s) | 2110, 2516 |
| AoxI | GGCC | 2 cut(s) | 540, 3173 |
| ApeKI | GCWGC | 7 cut(s) | 118, 1121, 1768, 2410, 2832, 2953, 2956 |
| ApoI | RAATTY | 4 cut(s) | 710, 827, 2653, 3048 |
| AseI | ATTAAT | 1 cut(s) | 1931 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2595, 2781 |
| Asp718I | GGTACC | 1 cut(s) | 965 |
| AspLEI | GCGC | 4 cut(s) | 2094, 2131, 2689, 2832 |
| AspS9I | GGNCC | 1 cut(s) | 3174 |
| AsuC2I | CCSGG | 1 cut(s) | 2527 |
| AsuHPI | GGTGA | 6 cut(s) | 1478, 2039, 2225, 2470, 2872, 3019 |
| AsuII | TTCGAA | 1 cut(s) | 2996 |
| AvaI | CYCGRG | 2 cut(s) | 2110, 2516 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 323, 356, 3187, 3220 |
| BanI | GGYRCC | 1 cut(s) | 965 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1347, 1379, 2580, 2612 |
| BauI | CACGAG | 1 cut(s) | 2285 |
| BbsI | GAAGAC | 2 cut(s) | 110, 1385 |
| Bbv12I | GWGCWC | 1 cut(s) | 1740 |
| BbvI | GCAGC | 7 cut(s) | 105, 1108, 1755, 2422, 2819, 2940, 2943 |
| BccI | CCATC | 8 cut(s) | 58, 286, 690, 1342, 1984, 2407, 2666, 2743 |
| BceAI | ACGGC | 2 cut(s) | 2785, 3022 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1047, 1081 |
| BciT130I | CCWGG | 3 cut(s) | 385, 2249, 2319 |
| BciVI | GTATCC | 1 cut(s) | 381 |
| BclI | TGATCA | 1 cut(s) | 1618 |
| BcnI | CCSGG | 1 cut(s) | 2527 |
| BcoDI | GTCTC | 5 cut(s) | 803, 1522, 2144, 2693, 3152 |
| BfaI | CTAG | 9 cut(s) | 198, 510, 1208, 1421, 1773, 1901, 2039, 2340, 3137 |
| BfmI | CTRYAG | 2 cut(s) | 1056, 2607 |
| BfoI | RGCGCY | 1 cut(s) | 2833 |
| BfrI | CTTAAG | 1 cut(s) | 883 |
| BfuI | GTATCC | 1 cut(s) | 381 |
| BglII | AGATCT | 4 cut(s) | 1060, 1357, 2005, 2332 |
| BisI | GCNGC | 9 cut(s) | 119, 1122, 1611, 1769, 2305, 2411, 2833, 2954, 2957 |
| BlsI | GCNGC | 9 cut(s) | 120, 1123, 1612, 1770, 2306, 2412, 2834, 2955, 2958 |
| BmcAI | AGTACT | 1 cut(s) | 2613 |
| Bme1390I | CCNGG | 4 cut(s) | 385, 2249, 2319, 2527 |
| BmeT110I | CYCGRG | 2 cut(s) | 2110, 2516 |
| BmgBI | CACGTC | 1 cut(s) | 938 |
| BmgT120I | GGNCC | 1 cut(s) | 3174 |
| BmiI | GGNNCC | 2 cut(s) | 381, 967 |
| BmrFI | CCNGG | 4 cut(s) | 385, 2249, 2319, 2527 |
| BmrI | ACTGGG | 1 cut(s) | 3090 |
| BmsI | GCATC | 9 cut(s) | 160, 324, 556, 1276, 1591, 1613, 1804, 1968, 2115 |
| BmuI | ACTGGG | 1 cut(s) | 3090 |
| BoxI | GACNNNNGTC | 2 cut(s) | 372, 2800 |
| BpiI | GAAGAC | 2 cut(s) | 110, 1385 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 3 cut(s) | 356, 1542, 2270 |
| Bpu14I | TTCGAA | 1 cut(s) | 2996 |
| BpuEI | CTTGAG | 3 cut(s) | 1290, 2453, 2917 |
| BpuMI | CCSGG | 1 cut(s) | 2527 |
| BsaAI | YACGTR | 1 cut(s) | 1684 |
| BsaI | GGTCTC | 2 cut(s) | 2144, 2693 |
| BsaJI | CCNNGG | 5 cut(s) | 94, 383, 1985, 2517, 2526 |
| BsaWI | WCCGGW | 2 cut(s) | 76, 3069 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 800, 830, 2406, 2436 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 114, 605, 1991, 2160, 2792, 2948, 3086 |
| Bse1I | ACTGG | 5 cut(s) | 339, 580, 2056, 2778, 3096 |
| BseBI | CCWGG | 3 cut(s) | 385, 2249, 2319 |
| BseDI | CCNNGG | 5 cut(s) | 94, 383, 1985, 2517, 2526 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 114, 605, 1991, 2160, 2792, 2948, 3086 |
| BseMII | CTCAG | 4 cut(s) | 202, 990, 2489, 2755 |
| BseNI | ACTGG | 5 cut(s) | 339, 580, 2056, 2778, 3096 |
| BseRI | GAGGAG | 3 cut(s) | 191, 2037, 2606 |
| BseXI | GCAGC | 7 cut(s) | 105, 1108, 1755, 2422, 2819, 2940, 2943 |
| BseYI | CCCAGC | 1 cut(s) | 113 |
| Bsh1236I | CGCG | 1 cut(s) | 2094 |
| BshFI | GGCC | 2 cut(s) | 542, 3175 |
| BshNI | GGYRCC | 1 cut(s) | 965 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1740 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2110, 2516 |
| BsiSI | CCGG | 3 cut(s) | 77, 2526, 3070 |
| BsiWI | CGTACG | 2 cut(s) | 1680, 1684 |
| BslFI | GGGAC | 5 cut(s) | 1640, 1674, 2499, 2706, 2808 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 114, 605, 1991, 2160, 2792, 2948, 3086 |
| BsmAI | GTCTC | 5 cut(s) | 803, 1522, 2144, 2693, 3152 |
| BsmBI | CGTCTC | 1 cut(s) | 803 |
| BsmFI | GGGAC | 5 cut(s) | 1640, 1674, 2499, 2706, 2808 |
| BsmI | GAATGC | 1 cut(s) | 2689 |
| BsnI | GGCC | 2 cut(s) | 542, 3175 |
| Bso31I | GGTCTC | 2 cut(s) | 2144, 2693 |
| BsoBI | CYCGRG | 2 cut(s) | 2110, 2516 |
| Bsp119I | TTCGAA | 1 cut(s) | 2996 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1740 |
| Bsp1407I | TGTACA | 1 cut(s) | 2820 |
| BspACI | CCGC | 9 cut(s) | 111, 563, 749, 1265, 1611, 2094, 2304, 2379, 2986 |
| BspANI | GGCC | 2 cut(s) | 542, 3175 |
| BspCNI | CTCAG | 4 cut(s) | 201, 991, 2490, 2754 |
| BspFNI | CGCG | 1 cut(s) | 2094 |
| BspHI | TCATGA | 2 cut(s) | 358, 940 |
| BspLI | GGNNCC | 2 cut(s) | 381, 967 |
| BspMAI | CTGCAG | 1 cut(s) | 1060 |
| BspPI | GGATC | 2 cut(s) | 885, 1338 |
| BspT104I | TTCGAA | 1 cut(s) | 2996 |
| BspT107I | GGYRCC | 1 cut(s) | 965 |
| BspTI | CTTAAG | 1 cut(s) | 883 |
| BspTNI | GGTCTC | 2 cut(s) | 2144, 2693 |
| BsrGI | TGTACA | 1 cut(s) | 2820 |
| BsrI | ACTGG | 5 cut(s) | 339, 580, 2056, 2778, 3096 |
| BssECI | CCNNGG | 5 cut(s) | 94, 383, 1985, 2517, 2526 |
| BssNAI | GTATAC | 1 cut(s) | 649 |
| BssSI | CACGAG | 1 cut(s) | 2285 |
| BssT1I | CCWWGG | 1 cut(s) | 1985 |
| Bst1107I | GTATAC | 1 cut(s) | 649 |
| Bst2BI | CACGAG | 1 cut(s) | 2285 |
| Bst2UI | CCWGG | 3 cut(s) | 385, 2249, 2319 |
| Bst4CI | ACNGT | 9 cut(s) | 859, 1292, 1368, 1631, 2464, 2611, 2710, 2855, 3042 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 498, 2601 |
| BstAFI | CTTAAG | 1 cut(s) | 883 |
| BstAUI | TGTACA | 1 cut(s) | 2820 |
| BstBAI | YACGTR | 1 cut(s) | 1684 |
| BstBI | TTCGAA | 1 cut(s) | 2996 |
| BstC8I | GCNNGC | 5 cut(s) | 955, 1233, 1766, 2545, 3077 |
| BstEII | GGTNACC | 1 cut(s) | 2521 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3084 |
| BstFNI | CGCG | 1 cut(s) | 2094 |
| BstH2I | RGCGCY | 1 cut(s) | 2833 |
| BstHHI | GCGC | 4 cut(s) | 2094, 2131, 2689, 2832 |
| BstMAI | GTCTC | 5 cut(s) | 803, 1522, 2144, 2693, 3152 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 220, 1273, 1581, 1610, 1801, 2563 |
| BstNI | CCWGG | 3 cut(s) | 385, 2249, 2319 |
| BstNSI | RCATGY | 5 cut(s) | 790, 1034, 1448, 2135, 2721 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 372, 2800 |
| BstPI | GGTNACC | 1 cut(s) | 2521 |
| BstSCI | CCNGG | 4 cut(s) | 383, 2247, 2317, 2525 |
| BstSFI | CTRYAG | 2 cut(s) | 1056, 2607 |
| BstSNI | TACGTA | 1 cut(s) | 1684 |
| BstUI | CGCG | 1 cut(s) | 2094 |
| BstV1I | GCAGC | 7 cut(s) | 105, 1108, 1755, 2422, 2819, 2940, 2943 |
| BstV2I | GAAGAC | 2 cut(s) | 110, 1385 |
| BstX2I | RGATCY | 6 cut(s) | 877, 1060, 1330, 1357, 2005, 2332 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1239 |
| BstYI | RGATCY | 6 cut(s) | 877, 1060, 1330, 1357, 2005, 2332 |
| BstZ17I | GTATAC | 1 cut(s) | 649 |
| BsuI | GTATCC | 1 cut(s) | 381 |
| BsuRI | GGCC | 2 cut(s) | 542, 3175 |
| BtrI | CACGTC | 1 cut(s) | 938 |
| BtsI | GCAGTG | 1 cut(s) | 2867 |
| BtsIMutI | CAGTG | 3 cut(s) | 1730, 2049, 2867 |
| Cac8I | GCNNGC | 5 cut(s) | 955, 1233, 1766, 2545, 3077 |
| CaiI | CAGNNNCTG | 1 cut(s) | 334 |
| CciI | TCATGA | 2 cut(s) | 358, 940 |
| CfoI | GCGC | 4 cut(s) | 2094, 2131, 2689, 2832 |
| Cfr13I | GGNCC | 1 cut(s) | 3174 |
| CseI | GACGC | 2 cut(s) | 1931, 2890 |
| Csp6I | GTAC | 8 cut(s) | 332, 966, 1448, 1681, 1685, 1854, 2612, 2821 |
| CviQI | GTAC | 8 cut(s) | 332, 966, 1448, 1681, 1685, 1854, 2612, 2821 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 498, 2601 |
| EarI | CTCTTC | 3 cut(s) | 40, 498, 2601 |
| Eco105I | TACGTA | 1 cut(s) | 1684 |
| Eco130I | CCWWGG | 1 cut(s) | 1985 |
| Eco31I | GGTCTC | 2 cut(s) | 2144, 2693 |
| Eco57I | CTGAAG | 7 cut(s) | 294, 1292, 1374, 1706, 1736, 2066, 3084 |
| Eco88I | CYCGRG | 2 cut(s) | 2110, 2516 |
| Eco91I | GGTNACC | 1 cut(s) | 2521 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3084 |
| EcoO65I | GGTNACC | 1 cut(s) | 2521 |
| EcoRI | GAATTC | 1 cut(s) | 3048 |
| EcoRII | CCWGG | 3 cut(s) | 383, 2247, 2317 |
| EcoT14I | CCWWGG | 1 cut(s) | 1985 |
| EcoT22I | ATGCAT | 2 cut(s) | 1488, 1606 |
| ErhI | CCWWGG | 1 cut(s) | 1985 |
| Esp3I | CGTCTC | 1 cut(s) | 803 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 423, 455, 877, 909, 2828, 2860 |
| FaqI | GGGAC | 5 cut(s) | 1640, 1674, 2499, 2706, 2808 |
| FauNDI | CATATG | 1 cut(s) | 1196 |
| FbaI | TGATCA | 1 cut(s) | 1618 |
| FblI | GTMKAC | 3 cut(s) | 648, 2869, 2904 |
| Fnu4HI | GCNGC | 9 cut(s) | 119, 1122, 1611, 1769, 2305, 2411, 2833, 2954, 2957 |
| Fsp4HI | GCNGC | 9 cut(s) | 119, 1122, 1611, 1769, 2305, 2411, 2833, 2954, 2957 |
| FspBI | CTAG | 9 cut(s) | 198, 510, 1208, 1421, 1773, 1901, 2039, 2340, 3137 |
| FspI | TGCGCA | 1 cut(s) | 2130 |
| GlaI | GCGC | 4 cut(s) | 2093, 2130, 2688, 2831 |
| GluI | GCNGC | 9 cut(s) | 119, 1122, 1611, 1769, 2305, 2411, 2833, 2954, 2957 |
| GsaI | CCCAGC | 1 cut(s) | 117 |
| GsuI | CTGGAG | 3 cut(s) | 356, 1542, 2270 |
| HaeII | RGCGCY | 1 cut(s) | 2833 |
| HaeIII | GGCC | 2 cut(s) | 542, 3175 |
| HapII | CCGG | 3 cut(s) | 77, 2526, 3070 |
| HgaI | GACGC | 2 cut(s) | 1931, 2890 |
| HhaI | GCGC | 4 cut(s) | 2094, 2131, 2689, 2832 |
| Hin6I | GCGC | 4 cut(s) | 2092, 2129, 2687, 2830 |
| HinP1I | GCGC | 4 cut(s) | 2092, 2129, 2687, 2830 |
| HincII | GTYRAC | 4 cut(s) | 85, 424, 980, 2905 |
| HindII | GTYRAC | 4 cut(s) | 85, 424, 980, 2905 |
| HindIII | AAGCTT | 2 cut(s) | 1718, 2555 |
| HpaI | GTTAAC | 1 cut(s) | 424 |
| HpaII | CCGG | 3 cut(s) | 77, 2526, 3070 |
| HphI | GGTGA | 6 cut(s) | 1478, 2039, 2225, 2470, 2872, 3019 |
| Hpy166II | GTNNAC | 9 cut(s) | 85, 424, 649, 980, 1854, 2870, 2905, 2921, 3018 |
| Hpy8I | GTNNAC | 9 cut(s) | 85, 424, 649, 980, 1854, 2870, 2905, 2921, 3018 |
| Hpy99I | CGWCG | 3 cut(s) | 1372, 2225, 2906 |
| HpyAV | CCTTC | 6 cut(s) | 516, 980, 1045, 2435, 2783, 3080 |
| HpyCH4III | ACNGT | 9 cut(s) | 859, 1292, 1368, 1631, 2464, 2611, 2710, 2855, 3042 |
| HpyCH4IV | ACGT | 8 cut(s) | 812, 937, 1147, 1683, 1687, 1874, 3145, 3217 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 220, 1273, 1581, 1610, 1801, 2563 |
| HpySE526I | ACGT | 8 cut(s) | 812, 937, 1147, 1683, 1687, 1874, 3145, 3217 |
| HspAI | GCGC | 4 cut(s) | 2092, 2129, 2687, 2830 |
| KpnI | GGTACC | 1 cut(s) | 969 |
| Ksp22I | TGATCA | 1 cut(s) | 1618 |
| KspAI | GTTAAC | 1 cut(s) | 424 |
| LmnI | GCTCC | 2 cut(s) | 23, 126 |
| Lsp1109I | GCAGC | 7 cut(s) | 105, 1108, 1755, 2422, 2819, 2940, 2943 |
| LweI | GCATC | 9 cut(s) | 160, 324, 556, 1276, 1591, 1613, 1804, 1968, 2115 |
| MaeI | CTAG | 9 cut(s) | 198, 510, 1208, 1421, 1773, 1901, 2039, 2340, 3137 |
| MaeII | ACGT | 8 cut(s) | 812, 937, 1147, 1683, 1687, 1874, 3145, 3217 |
| MfeI | CAATTG | 3 cut(s) | 600, 1614, 3055 |
| MflI | RGATCY | 6 cut(s) | 877, 1060, 1330, 1357, 2005, 2332 |
| MhlI | GDGCHC | 1 cut(s) | 1740 |
| MlyI | GAGTC | 9 cut(s) | 210, 515, 672, 1104, 1147, 1588, 1968, 2509, 2625 |
| MmeI | TCCRAC | 8 cut(s) | 237, 1378, 1521, 1542, 2284, 2307, 2608, 2790 |
| Mph1103I | ATGCAT | 2 cut(s) | 1488, 1606 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2595, 2781 |
| MslI | CAYNNNNRTG | 3 cut(s) | 246, 945, 1461 |
| MspA1I | CMGCKG | 2 cut(s) | 113, 2745 |
| MspCI | CTTAAG | 1 cut(s) | 883 |
| MspI | CCGG | 3 cut(s) | 77, 2526, 3070 |
| MspR9I | CCNGG | 4 cut(s) | 385, 2249, 2319, 2527 |
| MunI | CAATTG | 3 cut(s) | 600, 1614, 3055 |
| Mva1269I | GAATGC | 1 cut(s) | 2689 |
| MvaI | CCWGG | 3 cut(s) | 385, 2249, 2319 |
| MvnI | CGCG | 1 cut(s) | 2094 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 220, 1273, 1581, 1610, 1801, 2563 |
| NciI | CCSGG | 1 cut(s) | 2527 |
| NdeI | CATATG | 1 cut(s) | 1196 |
| NlaIV | GGNNCC | 2 cut(s) | 381, 967 |
| NmuCI | GTSAC | 8 cut(s) | 751, 859, 928, 1454, 1960, 2134, 2213, 2458 |
| NsbI | TGCGCA | 1 cut(s) | 2130 |
| NsiI | ATGCAT | 2 cut(s) | 1488, 1606 |
| NspI | RCATGY | 5 cut(s) | 790, 1034, 1448, 2135, 2721 |
| NspV | TTCGAA | 1 cut(s) | 2996 |
| OliI | CACNNNNGTG | 1 cut(s) | 1461 |
| PagI | TCATGA | 2 cut(s) | 358, 940 |
| PciI | ACATGT | 1 cut(s) | 1444 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 651 |
| PctI | GAATGC | 1 cut(s) | 2689 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2595, 2781 |
| PfeI | GAWTC | 5 cut(s) | 305, 2290, 2591, 2777, 2933 |
| Pfl23II | CGTACG | 2 cut(s) | 1680, 1684 |
| PflFI | GACNNNGTC | 2 cut(s) | 662, 814 |
| PfoI | TCCNGGA | 1 cut(s) | 2247 |
| PkrI | GCNGC | 9 cut(s) | 120, 1123, 1612, 1770, 2306, 2412, 2834, 2955, 2958 |
| PleI | GAGTC | 9 cut(s) | 209, 514, 671, 1104, 1146, 1587, 1967, 2508, 2625 |
| PpsI | GAGTC | 9 cut(s) | 209, 514, 671, 1104, 1146, 1587, 1967, 2508, 2625 |
| Ppu21I | YACGTR | 1 cut(s) | 1684 |
| PscI | ACATGT | 1 cut(s) | 1444 |
| PshAI | GACNNNNGTC | 2 cut(s) | 372, 2800 |
| PshBI | ATTAAT | 1 cut(s) | 1931 |
| Psp1406I | AACGTT | 1 cut(s) | 3145 |
| Psp6I | CCWGG | 3 cut(s) | 383, 2247, 2317 |
| PspEI | GGTNACC | 1 cut(s) | 2521 |
| PspFI | CCCAGC | 1 cut(s) | 113 |
| PspGI | CCWGG | 3 cut(s) | 383, 2247, 2317 |
| PspLI | CGTACG | 2 cut(s) | 1680, 1684 |
| PspN4I | GGNNCC | 2 cut(s) | 381, 967 |
| PspPI | GGNCC | 1 cut(s) | 3174 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 372, 404 |
| PstI | CTGCAG | 1 cut(s) | 1060 |
| PstNI | CAGNNNCTG | 1 cut(s) | 334 |
| PsuI | RGATCY | 6 cut(s) | 877, 1060, 1330, 1357, 2005, 2332 |
| PsyI | GACNNNGTC | 2 cut(s) | 662, 814 |
| PvuII | CAGCTG | 1 cut(s) | 2745 |
| RsaI | GTAC | 8 cut(s) | 333, 967, 1449, 1682, 1686, 1855, 2613, 2822 |
| RsaNI | GTAC | 8 cut(s) | 332, 966, 1448, 1681, 1685, 1854, 2612, 2821 |
| RseI | CAYNNNNRTG | 3 cut(s) | 246, 945, 1461 |
| SalI | GTCGAC | 1 cut(s) | 2903 |
| SatI | GCNGC | 9 cut(s) | 119, 1122, 1611, 1769, 2305, 2411, 2833, 2954, 2957 |
| Sau96I | GGNCC | 1 cut(s) | 3174 |
| ScaI | AGTACT | 1 cut(s) | 2613 |
| SchI | GAGTC | 9 cut(s) | 210, 515, 672, 1104, 1147, 1588, 1968, 2509, 2625 |
| ScrFI | CCNGG | 4 cut(s) | 385, 2249, 2319, 2527 |
| SduI | GDGCHC | 1 cut(s) | 1740 |
| SfaNI | GCATC | 9 cut(s) | 160, 324, 556, 1276, 1591, 1613, 1804, 1968, 2115 |
| SfcI | CTRYAG | 2 cut(s) | 1056, 2607 |
| SfuI | TTCGAA | 1 cut(s) | 2996 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 246, 945, 1461 |
| SmlI | CTYRAG | 4 cut(s) | 883, 1305, 2432, 2896 |
| SmoI | CTYRAG | 4 cut(s) | 883, 1305, 2432, 2896 |
| SnaBI | TACGTA | 1 cut(s) | 1684 |
| SsiI | CCGC | 9 cut(s) | 111, 563, 749, 1265, 1611, 2094, 2304, 2379, 2986 |
| SspI | AATATT | 2 cut(s) | 1162, 2125 |
| SspMI | CTAG | 9 cut(s) | 198, 510, 1208, 1421, 1773, 1901, 2039, 2340, 3137 |
| StyD4I | CCNGG | 4 cut(s) | 383, 2247, 2317, 2525 |
| StyI | CCWWGG | 1 cut(s) | 1985 |
| TaaI | ACNGT | 9 cut(s) | 859, 1292, 1368, 1631, 2464, 2611, 2710, 2855, 3042 |
| TaiI | ACGT | 8 cut(s) | 815, 940, 1150, 1686, 1690, 1877, 3148, 3220 |
| TaqI | TCGA | 9 cut(s) | 1370, 1376, 2067, 2293, 2365, 2568, 2712, 2904, 2996 |
| TatI | WGTACW | 3 cut(s) | 1853, 2611, 2820 |
| TauI | GCSGC | 2 cut(s) | 1613, 2307 |
| TfiI | GAWTC | 5 cut(s) | 305, 2290, 2591, 2777, 2933 |
| TscAI | CASTG | 3 cut(s) | 1730, 2056, 2867 |
| TseFI | GTSAC | 8 cut(s) | 751, 859, 928, 1454, 1960, 2134, 2213, 2458 |
| TseI | GCWGC | 7 cut(s) | 118, 1121, 1768, 2410, 2832, 2953, 2956 |
| Tsp45I | GTSAC | 8 cut(s) | 751, 859, 928, 1454, 1960, 2134, 2213, 2458 |
| TspGWI | ACGGA | 1 cut(s) | 602 |
| TspRI | CASTG | 3 cut(s) | 1730, 2056, 2867 |
| Tth111I | GACNNNGTC | 2 cut(s) | 662, 814 |
| Vha464I | CTTAAG | 1 cut(s) | 883 |
| VspI | ATTAAT | 1 cut(s) | 1931 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3084 |
| XapI | RAATTY | 4 cut(s) | 710, 827, 2653, 3048 |
| XbaI | TCTAGA | 1 cut(s) | 197 |
| XceI | RCATGY | 5 cut(s) | 790, 1034, 1448, 2135, 2721 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 493, 2742 |
| XmiI | GTMKAC | 3 cut(s) | 648, 2869, 2904 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2595, 2781 |
| XspI | CTAG | 9 cut(s) | 198, 510, 1208, 1421, 1773, 1901, 2039, 2340, 3137 |
| ZrmI | AGTACT | 1 cut(s) | 2613 |
| Zsp2I | ATGCAT | 2 cut(s) | 1488, 1606 |