MD08G1056800.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
4395761 .. 4396973
1213 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1056800.v1.1.491

Sequence Viewer

Length: 945 bp
ATGAATAACGTGGTTGAGATTGGTAGCGAGTTTTACGGTAACGATACTTGTGGGAGTGCTCCATTTAGATCTCTACAAGAATTGCACTTGGAAGATATGTTGGAGTGGGAAAAGTGGTCCTATTACGATGGAAGCAGAGGCAACACCACAATAATGTTTCCTAATCTTCGTGAGCTTGAATTGAGAAATTGTCCCAAGCTGACTGAGATATTACCGTTGGAGAAGCTGCAAAGTCTTGAAAGTGTAAAATTGAATGGTCTGGAGTCCTTTAGTGGTTCACTTGCACATGTGGAATCTAAATGCCCTAAATTCCTTTCCCTCGTTCACTTGGAAATGGTCGACTGCCCAAATTTTGTATGTTTTCCAGATGGAGGGATGGATGCGCCCAAATTGGAGGAGCTGCTTATCTATCGATGCAAGAAATTGAGGTCGTTGCCAGAACAAATGCATACCTTTCTACCGTCTCTTCAGAAATTGATGGTAATTGGCTGTCCAGAAGTGGAATCATTTCCTCAAGGAGGGCTGGCGTCAAATATACAAGACCTTTTTTTTAGTGTTGTAGAAAACTCGCTGCAAACCGAAATGGGATGTTCGTTTCCGGAAGAGGGTTTGCTGCCCGCCACTCTCACTAGTCTCTCCATCCGCTTTCATCCAAATCTTACAACCATCCAAGGCAAGGTTTTGAGACAACTCACCTCTCTTGAATACCTCAGAATAGAAGGATGCCCTGAGCTCCAGGGCTTTACAGAAGTAGCGCCCAAATCTCTGAAAAGGTTGGCTATTTTGGAGTGCCATAATATCGGGTGCTTGCCAGGAGAATGGCTTCCCACATCTCTTTCTCATCTGCTTATCAAAGAGTGTCCGCTGTTAAAAGAACGATTCCGAAGAGAGACAGGGGAAGATTGGCCCAAGATTTCTCACATCCCCCGTATAAATATAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

315

Amino Acids

35.58

Weight (kDa)

5.26

Isoelectric Point (pI)

64.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 339
AccIII TCCGGA 1 cut(s) 598
AciI CCGC 3 cut(s) 618, 643, 863
AcsI RAATTY 2 cut(s) 308, 349
AcuI CTGAAG 1 cut(s) 452
AcyI GRCGYC 1 cut(s) 527
AfiI CCNNNNNNNGG 4 cut(s) 371, 518, 605, 676
AflIII ACRYGT 1 cut(s) 286
AgsI TTSAA 4 cut(s) 179, 239, 253, 704
AhlI ACTAGT 1 cut(s) 629
AjnI CCWGG 2 cut(s) 735, 811
AluBI AGCT 5 cut(s) 175, 199, 226, 400, 733
AluI AGCT 5 cut(s) 175, 199, 226, 400, 733
Alw21I GWGCWC 2 cut(s) 61, 735
Alw26I GTCTC 4 cut(s) 468, 638, 679, 884
Aor13HI TCCGGA 1 cut(s) 598
AoxI GGCC 1 cut(s) 905
ApeKI GCWGC 4 cut(s) 226, 400, 571, 613
ApoI RAATTY 2 cut(s) 308, 349
Asp700I GAANNNNTTC 2 cut(s) 507, 822
AspLEI GCGC 2 cut(s) 385, 757
AspS9I GGNCC 2 cut(s) 117, 906
AsuHPI GGTGA 1 cut(s) 685
AvaII GGWCC 1 cut(s) 117
BanII GRGCYC 1 cut(s) 735
Bbv12I GWGCWC 2 cut(s) 61, 735
BbvI GCAGC 4 cut(s) 213, 387, 558, 600
BccI CCATC 6 cut(s) 122, 362, 370, 472, 647, 674
BciT130I CCWGG 2 cut(s) 737, 813
BcoDI GTCTC 4 cut(s) 468, 638, 679, 884
BcuI ACTAGT 1 cut(s) 629
BfaI CTAG 1 cut(s) 630
BfoI RGCGCY 1 cut(s) 758
BglII AGATCT 1 cut(s) 68
BisI GCNGC 4 cut(s) 227, 401, 572, 614
BlsI GCNGC 4 cut(s) 228, 402, 573, 615
Bme1390I CCNGG 2 cut(s) 737, 813
Bme18I GGWCC 1 cut(s) 117
BmgT120I GGNCC 2 cut(s) 117, 906
BmrFI CCNGG 2 cut(s) 737, 813
BmsI GCATC 3 cut(s) 370, 404, 713
BpmI CTGGAG 2 cut(s) 281, 719
Bpu10I CCTNAGC 1 cut(s) 729
BpuEI CTTGAG 1 cut(s) 498
Bsa29I ATCGAT 1 cut(s) 412
BsaHI GRCGYC 1 cut(s) 527
BsaJI CCNNGG 2 cut(s) 670, 736
BsaWI WCCGGW 1 cut(s) 598
Bsc4I CCNNNNNNNGG 4 cut(s) 371, 518, 605, 676
BseAI TCCGGA 1 cut(s) 598
BseBI CCWGG 2 cut(s) 737, 813
BseCI ATCGAT 1 cut(s) 412
BseDI CCNNGG 2 cut(s) 670, 736
BseGI GGATG 8 cut(s) 381, 385, 593, 639, 649, 666, 728, 921
BseLI CCNNNNNNNGG 4 cut(s) 371, 518, 605, 676
BseMII CTCAG 3 cut(s) 195, 720, 724
BseRI GAGGAG 1 cut(s) 410
BseXI GCAGC 4 cut(s) 213, 387, 558, 600
BshFI GGCC 1 cut(s) 907
BshVI ATCGAT 1 cut(s) 412
BsiHKAI GWGCWC 2 cut(s) 61, 735
BsiSI CCGG 1 cut(s) 599
BslFI GGGAC 1 cut(s) 177
BslI CCNNNNNNNGG 4 cut(s) 371, 518, 605, 676
BsmAI GTCTC 4 cut(s) 468, 638, 679, 884
BsmBI CGTCTC 1 cut(s) 468
BsmFI GGGAC 1 cut(s) 177
BsnI GGCC 1 cut(s) 907
Bsp1286I GDGCHC 2 cut(s) 61, 735
Bsp13I TCCGGA 1 cut(s) 598
Bsp143I GATC 1 cut(s) 68
BspACI CCGC 3 cut(s) 618, 643, 863
BspANI GGCC 1 cut(s) 907
BspCNI CTCAG 3 cut(s) 196, 721, 723
BspDI ATCGAT 1 cut(s) 412
BspEI TCCGGA 1 cut(s) 598
BssECI CCNNGG 2 cut(s) 670, 736
BssMI GATC 1 cut(s) 68
BssNI GRCGYC 1 cut(s) 527
BssT1I CCWWGG 1 cut(s) 670
Bst2UI CCWGG 2 cut(s) 737, 813
Bst4CI ACNGT 3 cut(s) 38, 216, 462
Bst6I CTCTTC 3 cut(s) 471, 597, 880
BstACI GRCGYC 1 cut(s) 527
BstC8I GCNNGC 3 cut(s) 525, 618, 809
BstDEI CTNAG 3 cut(s) 204, 710, 729
BstENI CCTNNNNNAGG 1 cut(s) 516
BstF5I GGATG 8 cut(s) 381, 385, 593, 639, 649, 666, 728, 921
BstH2I RGCGCY 1 cut(s) 758
BstHHI GCGC 2 cut(s) 385, 757
BstKTI GATC 1 cut(s) 71
BstMAI GTCTC 4 cut(s) 468, 638, 679, 884
BstMBI GATC 1 cut(s) 68
BstNI CCWGG 2 cut(s) 737, 813
BstNSI RCATGY 1 cut(s) 290
BstSCI CCNGG 2 cut(s) 735, 811
BstV1I GCAGC 4 cut(s) 213, 387, 558, 600
BstX2I RGATCY 1 cut(s) 68
BstXI CCANNNNNNTGG 1 cut(s) 819
BstYI RGATCY 1 cut(s) 68
Bsu15I ATCGAT 1 cut(s) 412
BsuRI GGCC 1 cut(s) 907
BsuTUI ATCGAT 1 cut(s) 412
BtsCI GGATG 8 cut(s) 381, 385, 593, 639, 649, 666, 728, 921
Cac8I GCNNGC 3 cut(s) 525, 618, 809
CfoI GCGC 2 cut(s) 385, 757
Cfr13I GGNCC 2 cut(s) 117, 906
ClaI ATCGAT 1 cut(s) 412
CseI GACGC 1 cut(s) 516
CviAII CATG 1 cut(s) 287
DdeI CTNAG 3 cut(s) 204, 710, 729
DpnI GATC 1 cut(s) 70
DpnII GATC 1 cut(s) 68
Eam1104I CTCTTC 3 cut(s) 471, 597, 880
EarI CTCTTC 3 cut(s) 471, 597, 880
Ecl136II GAGCTC 1 cut(s) 733
Eco130I CCWWGG 1 cut(s) 670
Eco24I GRGCYC 1 cut(s) 735
Eco47I GGWCC 1 cut(s) 117
Eco53kI GAGCTC 1 cut(s) 733
Eco57I CTGAAG 1 cut(s) 452
EcoICRI GAGCTC 1 cut(s) 733
EcoNI CCTNNNNNAGG 1 cut(s) 516
EcoRII CCWGG 2 cut(s) 735, 811
EcoT14I CCWWGG 1 cut(s) 670
EcoT22I ATGCAT 1 cut(s) 450
EcoT38I GRGCYC 1 cut(s) 735
ErhI CCWWGG 1 cut(s) 670
Esp3I CGTCTC 1 cut(s) 468
FaeI CATG 1 cut(s) 290
FaiI YATR 8 cut(s) 98, 288, 358, 450, 536, 795, 932, 938
FaqI GGGAC 1 cut(s) 177
FatI CATG 1 cut(s) 286
FauI CCCGC 1 cut(s) 625
FblI GTMKAC 1 cut(s) 339
Fnu4HI GCNGC 4 cut(s) 227, 401, 572, 614
FokI GGATG 8 cut(s) 388, 392, 600, 626, 636, 653, 735, 908
FriOI GRGCYC 1 cut(s) 735
Fsp4HI GCNGC 4 cut(s) 227, 401, 572, 614
FspBI CTAG 1 cut(s) 630
GlaI GCGC 2 cut(s) 384, 756
GluI GCNGC 4 cut(s) 227, 401, 572, 614
GsuI CTGGAG 2 cut(s) 281, 719
HaeII RGCGCY 1 cut(s) 758
HaeIII GGCC 1 cut(s) 907
HapII CCGG 1 cut(s) 599
HgaI GACGC 1 cut(s) 516
HhaI GCGC 2 cut(s) 385, 757
Hin1I GRCGYC 1 cut(s) 527
Hin1II CATG 1 cut(s) 290
Hin6I GCGC 2 cut(s) 383, 755
HinP1I GCGC 2 cut(s) 383, 755
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HinfI GANTC 4 cut(s) 263, 293, 503, 879
HpaII CCGG 1 cut(s) 599
HphI GGTGA 1 cut(s) 685
Hpy166II GTNNAC 3 cut(s) 278, 325, 340
Hpy188I TCNGA 4 cut(s) 471, 713, 768, 884
Hpy188III TCNNGA 7 cut(s) 170, 236, 260, 365, 494, 599, 701
Hpy8I GTNNAC 3 cut(s) 278, 325, 340
HpyAV CCTTC 1 cut(s) 713
HpyCH4III ACNGT 3 cut(s) 38, 216, 462
HpyCH4IV ACGT 1 cut(s) 9
HpyCH4V TGCA 6 cut(s) 85, 229, 284, 417, 448, 574
HpyF3I CTNAG 3 cut(s) 204, 710, 729
HpySE526I ACGT 1 cut(s) 9
Hsp92I GRCGYC 1 cut(s) 527
Hsp92II CATG 1 cut(s) 290
HspAI GCGC 2 cut(s) 383, 755
Kpn2I TCCGGA 1 cut(s) 598
Kzo9I GATC 1 cut(s) 68
LmnI GCTCC 3 cut(s) 64, 397, 738
Lsp1109I GCAGC 4 cut(s) 213, 387, 558, 600
LweI GCATC 3 cut(s) 370, 404, 713
MaeI CTAG 1 cut(s) 630
MaeII ACGT 1 cut(s) 9
MaeIII GTNAC 1 cut(s) 38
MalI GATC 1 cut(s) 70
MboI GATC 1 cut(s) 68
MboII GAAGA 6 cut(s) 104, 158, 458, 614, 897, 911
MflI RGATCY 1 cut(s) 68
MhlI GDGCHC 2 cut(s) 61, 735
MlyI GAGTC 1 cut(s) 272
MmeI TCCRAC 2 cut(s) 81, 198
Mph1103I ATGCAT 1 cut(s) 450
MroI TCCGGA 1 cut(s) 598
MroXI GAANNNNTTC 2 cut(s) 507, 822
MseI TTAA 1 cut(s) 869
MslI CAYNNNNRTG 1 cut(s) 152
MspA1I CMGCKG 1 cut(s) 865
MspI CCGG 1 cut(s) 599
MspR9I CCNGG 2 cut(s) 737, 813
MvaI CCWGG 2 cut(s) 737, 813
NdeII GATC 1 cut(s) 68
NlaIII CATG 1 cut(s) 290
NsiI ATGCAT 1 cut(s) 450
NspI RCATGY 1 cut(s) 290
PciI ACATGT 1 cut(s) 286
PdmI GAANNNNTTC 2 cut(s) 507, 822
PfeI GAWTC 3 cut(s) 293, 503, 879
PkrI GCNGC 4 cut(s) 228, 402, 573, 615
PleI GAGTC 1 cut(s) 271
PpsI GAGTC 1 cut(s) 271
PscI ACATGT 1 cut(s) 286
Psp124BI GAGCTC 1 cut(s) 735
Psp6I CCWGG 2 cut(s) 735, 811
PspGI CCWGG 2 cut(s) 735, 811
PspPI GGNCC 2 cut(s) 117, 906
PsuI RGATCY 1 cut(s) 68
RseI CAYNNNNRTG 1 cut(s) 152
SacI GAGCTC 1 cut(s) 735
SalI GTCGAC 1 cut(s) 338
SaqAI TTAA 1 cut(s) 869
SatI GCNGC 4 cut(s) 227, 401, 572, 614
Sau3AI GATC 1 cut(s) 68
Sau96I GGNCC 2 cut(s) 117, 906
SchI GAGTC 1 cut(s) 272
ScrFI CCNGG 2 cut(s) 737, 813
SduI GDGCHC 2 cut(s) 61, 735
SfaNI GCATC 3 cut(s) 370, 404, 713
SinI GGWCC 1 cut(s) 117
SmiMI CAYNNNNRTG 1 cut(s) 152
SmlI CTYRAG 1 cut(s) 513
SmoI CTYRAG 1 cut(s) 513
SpeI ACTAGT 1 cut(s) 629
SsiI CCGC 3 cut(s) 618, 643, 863
SspMI CTAG 1 cut(s) 630
SstI GAGCTC 1 cut(s) 735
StyD4I CCNGG 2 cut(s) 735, 811
StyI CCWWGG 1 cut(s) 670
TaaI ACNGT 3 cut(s) 38, 216, 462
TaiI ACGT 1 cut(s) 12
TaqI TCGA 2 cut(s) 339, 412
TfiI GAWTC 3 cut(s) 293, 503, 879
Tru1I TTAA 1 cut(s) 869
Tru9I TTAA 1 cut(s) 869
TseI GCWGC 4 cut(s) 226, 400, 571, 613
TspDTI ATGAA 2 cut(s) 17, 638
VpaK11BI GGWCC 1 cut(s) 117
XagI CCTNNNNNAGG 1 cut(s) 516
XapI RAATTY 2 cut(s) 308, 349
XceI RCATGY 1 cut(s) 290
XmiI GTMKAC 1 cut(s) 339
XmnI GAANNNNTTC 2 cut(s) 507, 822
XspI CTAG 1 cut(s) 630
Zsp2I ATGCAT 1 cut(s) 450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.