Rmu_co8502681.1_g000001

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8502681.1
Physical Location & Seq
Forward (+)
1 .. 2317
2317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8502681.1_g000001.1.cds

Sequence Viewer

Length: 2206 bp
tagacaaattgttcgaaagtgcaagggtcttcctttggctattaagtcccttgcgggtctcttatgttctaaattaaatgttggtgaatgggaaactatattgaacagtgacctgtgggagttgcctttggagagtgacattctgccatctctttggttgagctacatgtacctgccttcacaactcaaacattgttttgcatattgttcgatatttcccaagaactatgtgttcgaaacatcagaattggtttacttgtggaaggctgaagatctagtgcaacctaaaaaaaccaaaactgcagaagaaatcggacaagattacttcaatgatctaatctcaatgtcatttattcaagttgcatcaagttccgataaatatatcatgcatgaccttatcaatgatttagcaagctttgtatcaggagaatttttttctaggtgggagggcagtgattcaccaaacaatttgagcaagactcgtcacttttcatttatgtcgagatattgtgatgagactgatagcctagagatgtttgaggctttacagcaagctaaacatttgcacaccttactacaattaggaccatatatgcggtggacgttctcgggcaaagggttctacgaggcattgccaaagtttcaatgtttaagaatgctcaagttatcagggtactatattgatgaattgcctgattcaattaacaacttgaaacatcttcagcacttggacttgtcttacagttccatcgaaaagttacctgatacaatttgtactttgtataacttgcaggtattgctgttggtatgctgtacatgccttactgaactgccagctaacttgggaagattgatcaacttgagccatctggatattacaaagacgttaaaaaagatgccaccacaaatgggtaagttgaaagacctccagatgttaccagagtttgcgctagacaaacacactgctggggataatttgccggagttaaagaagcttgaaaaattgcgtggaagactttgtatctcagggcttgagtatagtagcggtttggaggcctacatactgagggacaagaagtttctgaaggaactggtattggaatggaaagaccccatttttttttggggaggaagggattcatgtgaagaaggcaataatactgtagaagaaagagaagtgcttgagaagctccaacctcacctgaacctggaaagtcttaaaattagaggttatagaggcaatatgtttccaggttggtcagaatattattcttcctctgctctcgtttatcttgaactttttgattgtgataattgtatatccttgccaccattgggacagttaccttccctcagagagcttgtagtaaaattctgtcccaatcttaccgggagattagcatcagacagtctcccatctcttgagtctttggacgtatataattgcccagaatttgaatgctttccggaagatggattcccgtcaaagttaaaatcacttgagtacttcgactgtaaaaaagtgaatgcaaagagagtgcagaatctgaacaagggtctccgaacactcacctctcttaaaagactggtacttgattttgactgcgacgaaaaagtagattggtttgcggaggagctgtttcccagcactctcacatatctagagatctgccgtctgaattgtgagaccatcgacggcgccaagtggtttggccatctcaactctcttcagacattgattattcgcgagtgccctgcgctccggtgcttgccagaaagtgggctaccctcttctcttcaacgcttggagatttggaattgtcctgcgctccggtgcttgccagatagtgggctaccctcttctctacatatctatgaatgtcctttgcttgagaaacggtgccaaagagagacgggtgaagattggcccaagattcacatcaaggacatatttattggggtcttgcttgaactcatgatcaatgggtttgacaaggacaagccataccaaggagaaacagaccgtttccattccccaaggtatgccgcacatcccaattctggtctttgcccttcccaattcagtctattgatactagagagaatatatatgttgttgtcaattgatactttgaaaagctgggtaatgtgtcttctttctgccctgtttcttgatatgcagcagaggcatgcacacatgggataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

734

Amino Acids

84.43

Weight (kDa)

5.64

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 181, 782
AccB1I GGYRCC 2 cut(s) 1698, 1900
AccB7I CCANNNNNTGG 2 cut(s) 1779, 1848
AccII CGCG 1 cut(s) 1747
AccIII TCCGGA 1 cut(s) 1466
AciI CCGC 5 cut(s) 54, 596, 1045, 1629, 2047
AcoI YGGCCR 1 cut(s) 1712
AcsI RAATTY 3 cut(s) 429, 1371, 1452
AcuI CTGAAG 4 cut(s) 289, 705, 1104, 1713
AcyI GRCGYC 1 cut(s) 1699
AfaI GTAC 6 cut(s) 171, 675, 776, 815, 1506, 1591
AfiI CCNNNNNNNGG 8 cut(s) 909, 1208, 1335, 1473, 1779, 1848, 2010, 2061
AflIII ACRYGT 1 cut(s) 166
AjnI CCWGG 2 cut(s) 1207, 1250
AluBI AGCT 9 cut(s) 163, 415, 555, 837, 995, 1190, 1361, 1637, 2140
AluI AGCT 9 cut(s) 163, 415, 555, 837, 995, 1190, 1361, 1637, 2140
Alw26I GTCTC 6 cut(s) 63, 510, 1416, 1563, 1680, 1905
AlwNI CAGNNNCTG 1 cut(s) 1547
Ama87I CYCGRG 1 cut(s) 608
Aor13HI TCCGGA 1 cut(s) 1466
AoxI GGCC 3 cut(s) 1054, 1712, 1926
ApeKI GCWGC 1 cut(s) 2180
ApoI RAATTY 3 cut(s) 429, 1371, 1452
ArsI GACNNNNNNTTYG 1 cut(s) 27
Asp700I GAANNNNTTC 2 cut(s) 1136, 1462
AspLEI GCGC 4 cut(s) 950, 1701, 1760, 1829
AspS9I GGNCC 2 cut(s) 585, 1927
AsuC2I CCSGG 1 cut(s) 1391
AsuHPI GGTGA 5 cut(s) 96, 451, 1191, 1562, 1929
AsuII TTCGAA 2 cut(s) 14, 235
AvaI CYCGRG 1 cut(s) 608
AvaII GGWCC 1 cut(s) 585
BaeGI GKGCMC 1 cut(s) 1755
BalI TGGCCA 1 cut(s) 1714
BanI GGYRCC 2 cut(s) 1698, 1900
BarI GAAGNNNNNNTAC 2 cut(s) 2137, 2169
BbsI GAAGAC 3 cut(s) 21, 1019, 2145
BbvI GCAGC 1 cut(s) 2192
BccI CCATC 7 cut(s) 155, 756, 874, 1424, 1467, 1698, 1723
BceAI ACGGC 2 cut(s) 1657, 1712
BcgI CGANNNNNNTGC 4 cut(s) 190, 224, 1737, 1771
BciT130I CCWGG 2 cut(s) 1209, 1252
BclI TGATCA 2 cut(s) 853, 1978
BcnI CCSGG 1 cut(s) 1391
BcoDI GTCTC 6 cut(s) 63, 510, 1416, 1563, 1680, 1905
BfaI CTAG 6 cut(s) 276, 439, 528, 951, 1662, 2097
BfmI CTRYAG 2 cut(s) 301, 1162
BfoI RGCGCY 1 cut(s) 1702
BfuAI ACCTGC 2 cut(s) 181, 782
BglII AGATCT 2 cut(s) 272, 1666
BisI GCNGC 2 cut(s) 2047, 2181
BlsI GCNGC 2 cut(s) 2048, 2182
BmcAI AGTACT 1 cut(s) 1506
Bme1390I CCNGG 3 cut(s) 1209, 1252, 1391
Bme18I GGWCC 1 cut(s) 585
BmeT110I CYCGRG 1 cut(s) 608
BmgT120I GGNCC 2 cut(s) 585, 1927
BmiI GGNNCC 2 cut(s) 1700, 1902
BmrFI CCNGG 3 cut(s) 1209, 1252, 1391
BmsI GCATC 3 cut(s) 372, 886, 1410
BpiI GAAGAC 3 cut(s) 21, 1019, 2145
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpmI CTGGAG 1 cut(s) 912
Bpu14I TTCGAA 2 cut(s) 14, 235
BpuEI CTTGAG 7 cut(s) 645, 881, 1053, 1203, 1443, 1521, 1911
BpuMI CCSGG 1 cut(s) 1391
BsaBI GATNNNNATC 2 cut(s) 1400, 1938
BsaHI GRCGYC 1 cut(s) 1699
BsaI GGTCTC 3 cut(s) 63, 1563, 1680
BsaJI CCNNGG 2 cut(s) 2009, 2037
BsaWI WCCGGW 3 cut(s) 1466, 1762, 1831
BsaXI ACNNNNNCTCC 2 cut(s) 1623, 1653
Bsc4I CCNNNNNNNGG 8 cut(s) 909, 1208, 1335, 1473, 1779, 1848, 2010, 2061
Bse1I ACTGG 2 cut(s) 1096, 1591
Bse3DI GCAATG 1 cut(s) 630
Bse8I GATNNNNATC 2 cut(s) 1400, 1938
BseAI TCCGGA 1 cut(s) 1466
BseBI CCWGG 2 cut(s) 1209, 1252
BseDI CCNNGG 2 cut(s) 2009, 2037
BseGI GGATG 1 cut(s) 2051
BseJI GATNNNNATC 2 cut(s) 1400, 1938
BseLI CCNNNNNNNGG 8 cut(s) 909, 1208, 1335, 1473, 1779, 1848, 2010, 2061
BseMI GCAATG 1 cut(s) 630
BseMII CTCAG 3 cut(s) 1039, 1056, 1367
BseNI ACTGG 2 cut(s) 1096, 1591
BseRI GAGGAG 1 cut(s) 1647
BseSI GKGCMC 1 cut(s) 1755
BseXI GCAGC 1 cut(s) 2192
BseYI CCCAGC 3 cut(s) 966, 1644, 2140
BsgI GTGCAG 1 cut(s) 1560
Bsh1236I CGCG 1 cut(s) 1747
BshFI GGCC 3 cut(s) 1056, 1714, 1928
BshNI GGYRCC 2 cut(s) 1698, 1900
BsiHKCI CYCGRG 1 cut(s) 608
BsiSI CCGG 5 cut(s) 981, 1390, 1467, 1763, 1832
BslFI GGGAC 4 cut(s) 32, 1083, 1351, 1363
BslI CCNNNNNNNGG 8 cut(s) 909, 1208, 1335, 1473, 1779, 1848, 2010, 2061
BsmAI GTCTC 6 cut(s) 63, 510, 1416, 1563, 1680, 1905
BsmBI CGTCTC 1 cut(s) 1905
BsmFI GGGAC 4 cut(s) 32, 1083, 1351, 1363
BsmI GAATGC 3 cut(s) 661, 1464, 1532
BsnI GGCC 3 cut(s) 1056, 1714, 1928
Bso31I GGTCTC 3 cut(s) 63, 1563, 1680
BsoBI CYCGRG 1 cut(s) 608
Bsp119I TTCGAA 2 cut(s) 14, 235
Bsp1286I GDGCHC 1 cut(s) 1755
Bsp13I TCCGGA 1 cut(s) 1466
Bsp1407I TGTACA 1 cut(s) 813
Bsp143I GATC 5 cut(s) 272, 332, 853, 1666, 1978
Bsp68I TCGCGA 1 cut(s) 1747
BspACI CCGC 5 cut(s) 54, 596, 1045, 1629, 2047
BspANI GGCC 3 cut(s) 1056, 1714, 1928
BspCNI CTCAG 3 cut(s) 1038, 1057, 1366
BspEI TCCGGA 1 cut(s) 1466
BspFNI CGCG 1 cut(s) 1747
BspHI TCATGA 1 cut(s) 1975
BspLI GGNNCC 2 cut(s) 1700, 1902
BspMAI CTGCAG 1 cut(s) 305
BspMI ACCTGC 2 cut(s) 181, 782
BspT104I TTCGAA 2 cut(s) 14, 235
BspT107I GGYRCC 2 cut(s) 1698, 1900
BspTNI GGTCTC 3 cut(s) 63, 1563, 1680
BsrDI GCAATG 1 cut(s) 630
BsrGI TGTACA 1 cut(s) 813
BsrI ACTGG 2 cut(s) 1096, 1591
BssECI CCNNGG 2 cut(s) 2009, 2037
BssMI GATC 5 cut(s) 272, 332, 853, 1666, 1978
BssNI GRCGYC 1 cut(s) 1699
BssT1I CCWWGG 2 cut(s) 2009, 2037
Bst2UI CCWGG 2 cut(s) 1209, 1252
Bst4CI ACNGT 8 cut(s) 108, 744, 1163, 1342, 1410, 1515, 1900, 2025
Bst6I CTCTTC 4 cut(s) 1732, 1796, 1801, 1865
BstACI GRCGYC 1 cut(s) 1699
BstAPI GCANNNNNTGC 1 cut(s) 797
BstAUI TGTACA 1 cut(s) 813
BstBI TTCGAA 2 cut(s) 14, 235
BstC8I GCNNGC 6 cut(s) 413, 553, 835, 1770, 1839, 2191
BstDEI CTNAG 3 cut(s) 1025, 1065, 1353
BstF5I GGATG 1 cut(s) 2051
BstFNI CGCG 1 cut(s) 1747
BstH2I RGCGCY 1 cut(s) 1702
BstHHI GCGC 4 cut(s) 950, 1701, 1760, 1829
BstKTI GATC 5 cut(s) 275, 335, 856, 1669, 1981
BstMAI GTCTC 6 cut(s) 63, 510, 1416, 1563, 1680, 1905
BstMBI GATC 5 cut(s) 272, 332, 853, 1666, 1978
BstMWI GCNNNNNNNGC 4 cut(s) 797, 817, 1187, 2186
BstNI CCWGG 2 cut(s) 1209, 1252
BstNSI RCATGY 3 cut(s) 170, 820, 2193
BstSCI CCNGG 3 cut(s) 1207, 1250, 1389
BstSFI CTRYAG 2 cut(s) 301, 1162
BstSLI GKGCMC 1 cut(s) 1755
BstUI CGCG 1 cut(s) 1747
BstV1I GCAGC 1 cut(s) 2192
BstV2I GAAGAC 3 cut(s) 21, 1019, 2145
BstX2I RGATCY 2 cut(s) 272, 1666
BstXI CCANNNNNNTGG 1 cut(s) 154
BstYI RGATCY 2 cut(s) 272, 1666
BsuRI GGCC 3 cut(s) 1056, 1714, 1928
BtsCI GGATG 1 cut(s) 2051
BtsI GCAGTG 2 cut(s) 458, 961
BtsIMutI CAGTG 3 cut(s) 113, 458, 961
BtuMI TCGCGA 1 cut(s) 1747
BveI ACCTGC 2 cut(s) 181, 782
Cac8I GCNNGC 6 cut(s) 413, 553, 835, 1770, 1839, 2191
CaiI CAGNNNCTG 1 cut(s) 1547
CciI TCATGA 1 cut(s) 1975
CfoI GCGC 4 cut(s) 950, 1701, 1760, 1829
Cfr13I GGNCC 2 cut(s) 585, 1927
Csp6I GTAC 6 cut(s) 170, 674, 775, 814, 1505, 1590
CviAII CATG 8 cut(s) 167, 386, 390, 817, 1141, 1976, 2190, 2198
CviQI GTAC 6 cut(s) 170, 674, 775, 814, 1505, 1590
DdeI CTNAG 3 cut(s) 1025, 1065, 1353
DinI GGCGCC 1 cut(s) 1700
DpnI GATC 5 cut(s) 274, 334, 855, 1668, 1980
DpnII GATC 5 cut(s) 272, 332, 853, 1666, 1978
EaeI YGGCCR 1 cut(s) 1712
Eam1104I CTCTTC 4 cut(s) 1732, 1796, 1801, 1865
EarI CTCTTC 4 cut(s) 1732, 1796, 1801, 1865
Eco130I CCWWGG 2 cut(s) 2009, 2037
Eco147I AGGCCT 1 cut(s) 1056
Eco31I GGTCTC 3 cut(s) 63, 1563, 1680
Eco47I GGWCC 1 cut(s) 585
Eco57I CTGAAG 4 cut(s) 289, 705, 1104, 1713
Eco88I CYCGRG 1 cut(s) 608
EcoRII CCWGG 2 cut(s) 1207, 1250
EcoT14I CCWWGG 2 cut(s) 2009, 2037
EcoT22I ATGCAT 1 cut(s) 391
EgeI GGCGCC 1 cut(s) 1700
EheI GGCGCC 1 cut(s) 1700
ErhI CCWWGG 2 cut(s) 2009, 2037
Esp3I CGTCTC 1 cut(s) 1905
FaeI CATG 8 cut(s) 170, 389, 393, 820, 1144, 1979, 2193, 2201
FaqI GGGAC 4 cut(s) 32, 1083, 1351, 1363
FatI CATG 8 cut(s) 166, 385, 389, 816, 1140, 1975, 2189, 2197
FauI CCCGC 1 cut(s) 47
FbaI TGATCA 2 cut(s) 853, 1978
Fnu4HI GCNGC 2 cut(s) 2047, 2181
FokI GGATG 1 cut(s) 2038
Fsp4HI GCNGC 2 cut(s) 2047, 2181
FspBI CTAG 6 cut(s) 276, 439, 528, 951, 1662, 2097
GlaI GCGC 4 cut(s) 949, 1700, 1759, 1828
GluI GCNGC 2 cut(s) 2047, 2181
GsaI CCCAGC 3 cut(s) 970, 1648, 2144
GsuI CTGGAG 1 cut(s) 912
HaeII RGCGCY 1 cut(s) 1702
HaeIII GGCC 3 cut(s) 1056, 1714, 1928
HapII CCGG 5 cut(s) 981, 1390, 1467, 1763, 1832
HhaI GCGC 4 cut(s) 950, 1701, 1760, 1829
Hin1I GRCGYC 1 cut(s) 1699
Hin1II CATG 8 cut(s) 170, 389, 393, 820, 1144, 1979, 2193, 2201
Hin6I GCGC 4 cut(s) 948, 1699, 1758, 1827
HinP1I GCGC 4 cut(s) 948, 1699, 1758, 1827
HindIII AAGCTT 2 cut(s) 413, 993
HinfI GANTC 8 cut(s) 456, 479, 696, 1137, 1425, 1477, 1544, 1934
HpaII CCGG 5 cut(s) 981, 1390, 1467, 1763, 1832
HphI GGTGA 5 cut(s) 96, 451, 1191, 1562, 1929
Hpy166II GTNNAC 2 cut(s) 254, 601
Hpy8I GTNNAC 2 cut(s) 254, 601
Hpy99I CGWCG 2 cut(s) 1611, 1698
HpyAV CCTTC 7 cut(s) 187, 257, 1079, 1126, 1143, 1357, 2083
HpyCH4III ACNGT 8 cut(s) 108, 744, 1163, 1342, 1410, 1515, 1900, 2025
HpyCH4IV ACGT 3 cut(s) 603, 885, 1435
HpyF10VI GCNNNNNNNGC 4 cut(s) 797, 817, 1187, 2186
HpyF3I CTNAG 3 cut(s) 1025, 1065, 1353
HpySE526I ACGT 3 cut(s) 603, 885, 1435
Hsp92I GRCGYC 1 cut(s) 1699
Hsp92II CATG 8 cut(s) 170, 389, 393, 820, 1144, 1979, 2193, 2201
HspAI GCGC 4 cut(s) 948, 1699, 1758, 1827
KasI GGCGCC 1 cut(s) 1698
Kpn2I TCCGGA 1 cut(s) 1466
Ksp22I TGATCA 2 cut(s) 853, 1978
Kzo9I GATC 5 cut(s) 272, 332, 853, 1666, 1978
LmnI GCTCC 4 cut(s) 1195, 1634, 1765, 1834
Lsp1109I GCAGC 1 cut(s) 2192
LweI GCATC 3 cut(s) 372, 886, 1410
MaeI CTAG 6 cut(s) 276, 439, 528, 951, 1662, 2097
MaeII ACGT 3 cut(s) 603, 885, 1435
MaeIII GTNAC 6 cut(s) 108, 135, 483, 757, 934, 1342
MalI GATC 5 cut(s) 274, 334, 855, 1668, 1980
MboI GATC 5 cut(s) 272, 332, 853, 1666, 1978
MfeI CAATTG 1 cut(s) 2122
MflI RGATCY 2 cut(s) 272, 1666
MhlI GDGCHC 1 cut(s) 1755
MlsI TGGCCA 1 cut(s) 1714
MluNI TGGCCA 1 cut(s) 1714
Mly113I GGCGCC 1 cut(s) 1699
MlyI GAGTC 2 cut(s) 473, 1434
MmeI TCCRAC 1 cut(s) 1217
Mox20I TGGCCA 1 cut(s) 1714
Mph1103I ATGCAT 1 cut(s) 391
MroI TCCGGA 1 cut(s) 1466
MroXI GAANNNNTTC 2 cut(s) 1136, 1462
MscI TGGCCA 1 cut(s) 1714
MseI TTAA 9 cut(s) 43, 75, 651, 703, 888, 987, 1219, 1491, 1579
MslI CAYNNNNRTG 1 cut(s) 1873
Msp20I TGGCCA 1 cut(s) 1714
MspI CCGG 5 cut(s) 981, 1390, 1467, 1763, 1832
MspR9I CCNGG 3 cut(s) 1209, 1252, 1391
MunI CAATTG 1 cut(s) 2122
Mva1269I GAATGC 3 cut(s) 661, 1464, 1532
MvaI CCWGG 2 cut(s) 1209, 1252
MvnI CGCG 1 cut(s) 1747
MwoI GCNNNNNNNGC 4 cut(s) 797, 817, 1187, 2186
NarI GGCGCC 1 cut(s) 1699
NciI CCSGG 1 cut(s) 1391
NdeII GATC 5 cut(s) 272, 332, 853, 1666, 1978
NlaIII CATG 8 cut(s) 170, 389, 393, 820, 1144, 1979, 2193, 2201
NlaIV GGNNCC 2 cut(s) 1700, 1902
NmuCI GTSAC 3 cut(s) 108, 135, 483
NruI TCGCGA 1 cut(s) 1747
NsiI ATGCAT 1 cut(s) 391
NspI RCATGY 3 cut(s) 170, 820, 2193
NspV TTCGAA 2 cut(s) 14, 235
PaeI GCATGC 1 cut(s) 2193
PagI TCATGA 1 cut(s) 1975
PceI AGGCCT 1 cut(s) 1056
PciI ACATGT 1 cut(s) 166
PctI GAATGC 3 cut(s) 661, 1464, 1532
PdmI GAANNNNTTC 2 cut(s) 1136, 1462
PfeI GAWTC 6 cut(s) 456, 696, 1137, 1477, 1544, 1934
PflMI CCANNNNNTGG 2 cut(s) 1779, 1848
PkrI GCNGC 2 cut(s) 2048, 2182
PleI GAGTC 2 cut(s) 473, 1433
PluTI GGCGCC 1 cut(s) 1702
PpsI GAGTC 2 cut(s) 473, 1433
PscI ACATGT 1 cut(s) 166
Psp6I CCWGG 2 cut(s) 1207, 1250
PspFI CCCAGC 3 cut(s) 966, 1644, 2140
PspGI CCWGG 2 cut(s) 1207, 1250
PspN4I GGNNCC 2 cut(s) 1700, 1902
PspPI GGNCC 2 cut(s) 585, 1927
PstI CTGCAG 1 cut(s) 305
PstNI CAGNNNCTG 1 cut(s) 1547
PsuI RGATCY 2 cut(s) 272, 1666
RruI TCGCGA 1 cut(s) 1747
RsaI GTAC 6 cut(s) 171, 675, 776, 815, 1506, 1591
RsaNI GTAC 6 cut(s) 170, 674, 775, 814, 1505, 1590
RseI CAYNNNNRTG 1 cut(s) 1873
SaqAI TTAA 9 cut(s) 43, 75, 651, 703, 888, 987, 1219, 1491, 1579
SatI GCNGC 2 cut(s) 2047, 2181
Sau3AI GATC 5 cut(s) 272, 332, 853, 1666, 1978
Sau96I GGNCC 2 cut(s) 585, 1927
ScaI AGTACT 1 cut(s) 1506
SchI GAGTC 2 cut(s) 473, 1434
ScrFI CCNGG 3 cut(s) 1209, 1252, 1391
SduI GDGCHC 1 cut(s) 1755
SfaNI GCATC 3 cut(s) 372, 886, 1410
SfcI CTRYAG 2 cut(s) 301, 1162
SfoI GGCGCC 1 cut(s) 1700
SfuI TTCGAA 2 cut(s) 14, 235
SinI GGWCC 1 cut(s) 585
SmiMI CAYNNNNRTG 1 cut(s) 1873
SmlI CTYRAG 7 cut(s) 660, 860, 1032, 1182, 1422, 1500, 1890
SmoI CTYRAG 7 cut(s) 660, 860, 1032, 1182, 1422, 1500, 1890
SphI GCATGC 1 cut(s) 2193
SseBI AGGCCT 1 cut(s) 1056
SsiI CCGC 5 cut(s) 54, 596, 1045, 1629, 2047
SspDI GGCGCC 1 cut(s) 1698
SspI AATATT 1 cut(s) 1266
SspMI CTAG 6 cut(s) 276, 439, 528, 951, 1662, 2097
StuI AGGCCT 1 cut(s) 1056
StyD4I CCNGG 3 cut(s) 1207, 1250, 1389
StyI CCWWGG 2 cut(s) 2009, 2037
TaaI ACNGT 8 cut(s) 108, 744, 1163, 1342, 1410, 1515, 1900, 2025
TaiI ACGT 3 cut(s) 606, 888, 1438
TaqI TCGA 7 cut(s) 14, 210, 235, 501, 751, 1510, 1693
TatI WGTACW 3 cut(s) 774, 813, 1504
TauI GCSGC 1 cut(s) 2049
TfiI GAWTC 6 cut(s) 456, 696, 1137, 1477, 1544, 1934
Tru1I TTAA 9 cut(s) 43, 75, 651, 703, 888, 987, 1219, 1491, 1579
Tru9I TTAA 9 cut(s) 43, 75, 651, 703, 888, 987, 1219, 1491, 1579
TscAI CASTG 3 cut(s) 113, 458, 968
TseFI GTSAC 3 cut(s) 108, 135, 483
TseI GCWGC 1 cut(s) 2180
Tsp45I GTSAC 3 cut(s) 108, 135, 483
TspDTI ATGAA 4 cut(s) 481, 700, 1129, 1891
TspRI CASTG 3 cut(s) 113, 458, 968
Van91I CCANNNNNTGG 2 cut(s) 1779, 1848
VpaK11BI GGWCC 1 cut(s) 585
XapI RAATTY 3 cut(s) 429, 1371, 1452
XbaI TCTAGA 1 cut(s) 1661
XceI RCATGY 3 cut(s) 170, 820, 2193
XcmI CCANNNNNNNNNTGG 1 cut(s) 595
XmnI GAANNNNTTC 2 cut(s) 1136, 1462
XspI CTAG 6 cut(s) 276, 439, 528, 951, 1662, 2097
ZrmI AGTACT 1 cut(s) 1506
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.