RchiOBHm_Chr1g0349661

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
42743166 .. 42746205
3040 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57562

Sequence Viewer

Length: 2967 bp
ATGGCTCTGGAATTAGTGGGTGGAGCTTTTCTCTCTTCATTTCTCTCTGTTTTGTTTGATAGACTTGCCTCTCGTCAAGTAGTTGACTTCATCTCCAAACAGAAAGTCAACTATGGATTGCTCAAGAAGTTAAAGATGAAGTTGATTTCCGTGAATGCAGTGCTCGATGATGCAGAGGAGAAGCAAATCAGAAACCCGCATGTGAGGGCATGGCTTGACGAGCTTAAAGATGCTTTGTATGTTGCAGGGGACTTGCTCGATGAGATCAATACCGAAGCTCTACGTGGTCAGGTACACAATCTCAGCTCTACTAATTCATTAGATGAATTTGACAAAACTATGGAGCACAAGTTATTGGAGACTCTTGAGAGATTAGAACATATTATGAAGGAAAAAGATGAGTTTGGTTTGATAGAAAGTCTCAAAGATAAACCACAACCAGCAAGATTACTTGAAGCTTCTTCTCTGGTAAATGATGTTGATGTGTATGGAAGGGAGAAGGACAAGAAGGTCATCGTTGACTTGTTGTTATCGGACAGTGCAATCAATGATAAGCTAAGTGTGATTCCTGTCGTGGGCATGGGTGGGATCGGTAAGACAACTCTTGCTCAGCTTGTATACAACAATGAAAGAGTAAAGCTACATTTTGACCTCCAAGCATGGGTTTGTGTATCTGTAGAATTTGATATTCCTAGAATAACACAAAAACTGTACGCGTCAATTACTTCACAATCTTGTGGTGTGACAGAACTTGATCTGCTTCAAGTTAAGCTGAAGGAACTTTTGACAGAAAAGAAGTTTCTCCTTGTTCTAGATGATGTTTGGAATGAGAATAATATCGACTGGGATGCATTTATGCGTCCCTTTGAATCAGGAGCCAGAGGGAGTAAGATTATTGTCACGACACGCAGTGAAGGTGTTTCTTCTGTGATGGGTACTGTTGCAAGTCACCGTTTGATGCAAATGTCTGAGGAGGATTGTTGGTTGTTATTTGCAAAGCATGCCTTCAAAAATGCTGATGTGCTGAGATCAAATCCAAATCTTGAAGTAATTGGAAGACAGATTGTTAGAAAATGTAAAGGCCTTCCTTTAGCTGCAAAGTCACTTGGAGGCCTCTTACGCTCTGAATTGAGTATTGGGAAATGGGAAAACATACTGAAGAGTGACTTATGGGACTTGTCAGATAGGGAGATGAACATTCTGCCTGCTTTGTGGTTGAGCTACCATCATCTGCCTTCACATCTGAAACGTTGTTTTGCCTATTGTTCGATATTTCCCAAAGGTTATGAATTCAAAAGCTCAGAGTTAGTTCTGTTGTGGATGGCTGAAGATCTCTTGCAACCAAAAAGGAAGATAACGTTGGAAAAAGTTGGAGAGGGATACTTCGATATTCTAACCTCAAGGTCACTTTTCCAACATTTATTTGATAATTATCGTCATGAACCGATTTTCACCATGCATGATCTCATACATGATCTGGCAAAGTTTGTATCAGGAGAGTTTTCTATTAGGTTGGAAGAAGAAGAGTCAATCAACATTGTAAGCAAAGCTCGTCACTTTTCATATATGAAGACAAGTGATCATGGCTTTGAGAAATTTGAGGCTTTATATAGGGCCAAGTATCTGCGCACCTTCCTACCATTCCGACCGTATTCTCCACATCAATACTTTCCAATGTCAAATAAGGTACTATATGATCTATTGCCAATTCTACAACATTTAAGAGTGCTCAATTTATCAGATTATGATATTAAGGAGATGCCTGGTTCAATTTGCAACTTGAAACATCTAAGGTACTTGGATTTGTCTCGCAGTTCTATTGAAAAATTGCCTGATGCATTGTGTAGCTTGTATAATTTACAAACATTAGTGTTGCGGAATTGTGGAGCTATTTCCATGTTGCCAAGCCATTTCGGGAGACTAATCAACTTGCGCCATCTTGATGTTCGAGGGACACGGTTAAAAAAGATGCCACCAAACATGGGTAAACTGAAAGATCTGCAACTTTTAACTGACTTCATATTGGACAAGCATAGTGGCTGTAACATTGCAGAGTTAAAGGAGCTTCAGAAGTTGCGCGGAGCACTTTATATTTCAGGGTTGCAGAACATTATCCATGTTGGAGATGCCATGAAGGCCAATATGAGGAACAAGAAGTATATCACTGAGCTAGTCTTGAAATGGGGAGATGATATTGAGGATTCACAAAAGGACAGAGAAATCCTGGAGACTCTCCAACCCCATGCAAACCTAAAAGAACTTGTAATTGAATTCTATGGGGGTACAAGGTTTCCGGATTGGTTAGGAGATGAGTCTTTCACCCACCTAGCTTCTGTTAGGTTTTCAGATTGTAAGTTCTGTTGCTTCTTGCCACCACTTGGGCAGTTACCCTCCCTACGAACACTTTGGATTCAGAGATTAAATGAAGTAGTGTCTATAGGTCCTGAGTTTTATGGTGGCAATAGTAATGGTGTATTGAAGCCATTTCGATCTCTGAAAGAACTGCGGATTATGAATATGTTGGAGTGGCGAGAATGGGATGATATTAGTGGTAACACAGAAGGTGGAGTTTTTCCTAATCTTTGTGGTCTCCATGTTAGTAATTGTCCCAAGCTAACTGAGATATTACCATTGGATAACTTCCCAACGCTTGAATGGCTAGAGTTGTGGAATCTGGAATCCTTCAGTGGTTCACTCTCACAAGAATCTCATTGCATTGTGAACCTCTTTCTTGGTAGATTGGAAATATGGGGTTGCCCAAATTTTGTAAGTTTTCCTAGTTATGGAAGGATAAATGCTCCCAAATTGGCAGATTTGGATATCCGTACATGTGTGAAGTTTCGGTCATTTCCAGAACAGATGCACACCTTTGCCCCATTTCTTCAGCATTTGACCATACGAAATTGTCCAGAATTTGAATCATTTCCAGAAGGGGGATTACCACCGGCATTGAAATCCCTCGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

988

Amino Acids

113.14

Weight (kDa)

6.33

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 100 7.1e-19 Rx N-terminal domain
NB-ARC PF00931 183 - 339 5.4e-38 NB-ARC domain
WHD_DRP PF23559 424 - 494 8.1e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 568 - 838 2.5e-30 Leucine-rich repeat region
LRR_8 PF13855 573 - 628 6.4e-07 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 683 - 806 1.3e-39 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 509
Acc16I TGCGCA 1 cut(s) 1628
AccB7I CCANNNNNTGG 1 cut(s) 2378
AccI GTMKAC 1 cut(s) 618
AccII CGCG 2 cut(s) 716, 2079
AccIII TCCGGA 1 cut(s) 2293
AciI CCGC 4 cut(s) 197, 1876, 2079, 2506
AclI AACGTT 2 cut(s) 1249, 1358
AclWI GGATC 1 cut(s) 596
AcsI RAATTY 7 cut(s) 326, 680, 1289, 1595, 2270, 2761, 2912
AcuI CTGAAG 6 cut(s) 794, 1178, 1347, 2051, 2668, 2867
AdeI CACNNNGTG 1 cut(s) 911
AfaI GTAC 7 cut(s) 294, 713, 937, 1689, 1796, 2284, 2827
AfiI CCNNNNNNNGG 7 cut(s) 575, 661, 1982, 2145, 2378, 2783, 2933
AflIII ACRYGT 2 cut(s) 714, 2828
AjnI CCWGG 2 cut(s) 1762, 2223
AjuI GAANNNNNNNTTGG 4 cut(s) 1119, 1151, 1343, 1375
Alw21I GWGCWC 4 cut(s) 165, 348, 1731, 2086
Alw26I GTCTC 6 cut(s) 353, 425, 1812, 1912, 2222, 2594
AlwI GGATC 1 cut(s) 596
Aor13HI TCCGGA 1 cut(s) 2293
AoxI GGCC 4 cut(s) 1081, 1111, 1614, 2136
ApeKI GCWGC 1 cut(s) 1094
ApoI RAATTY 7 cut(s) 326, 680, 1289, 1595, 2270, 2761, 2912
ArsI GACNNNNNNTTYG 2 cut(s) 90, 122
Asp700I GAANNNNTTC 1 cut(s) 2922
AspLEI GCGC 3 cut(s) 1629, 1935, 2079
AspS9I GGNCC 2 cut(s) 1614, 2441
AsuHPI GGTGA 3 cut(s) 941, 1444, 2311
AvaII GGWCC 1 cut(s) 2441
BarI GAAGNNNNNNTAC 2 cut(s) 2922, 2954
BbsI GAAGAC 2 cut(s) 1063, 1577
Bbv12I GWGCWC 4 cut(s) 165, 348, 1731, 2086
BbvI GCAGC 1 cut(s) 1081
BccI CCATC 4 cut(s) 925, 1233, 1315, 1944
BcgI CGANNNNNNTGC 2 cut(s) 830, 864
BciT130I CCWGG 2 cut(s) 1764, 2225
BciVI GTATCC 1 cut(s) 1373
BclI TGATCA 1 cut(s) 1579
BcoDI GTCTC 6 cut(s) 353, 425, 1812, 1912, 2222, 2594
BfaI CTAG 6 cut(s) 693, 812, 2171, 2327, 2660, 2778
BfmI CTRYAG 2 cut(s) 675, 2436
BfuI GTATCC 1 cut(s) 1373
BglI GCCNNNNNGGC 1 cut(s) 2135
BglII AGATCT 2 cut(s) 1330, 1996
BisI GCNGC 1 cut(s) 1095
BlpI GCTNAGC 1 cut(s) 609
BlsI GCNGC 1 cut(s) 1096
Bme1390I CCNGG 2 cut(s) 1764, 2225
Bme18I GGWCC 1 cut(s) 2441
BmgT120I GGNCC 2 cut(s) 1614, 2441
BmiI GGNNCC 1 cut(s) 877
BmrFI CCNGG 2 cut(s) 1764, 2225
BmrI ACTGGG 1 cut(s) 853
BmsI GCATC 9 cut(s) 160, 220, 838, 948, 1749, 1825, 1959, 2116, 2850
BmuI ACTGGG 1 cut(s) 853
BpiI GAAGAC 2 cut(s) 1063, 1577
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 1 cut(s) 2246
Bpu1102I GCTNAGC 1 cut(s) 609
BpuEI CTTGAG 3 cut(s) 107, 386, 1384
BsaAI YACGTR 1 cut(s) 284
BsaBI GATNNNNATC 1 cut(s) 1431
BsaI GGTCTC 1 cut(s) 2594
BsaWI WCCGGW 1 cut(s) 2293
BsaXI ACNNNNNCTCC 4 cut(s) 77, 107, 335, 365
Bsc4I CCNNNNNNNGG 7 cut(s) 575, 661, 1982, 2145, 2378, 2783, 2933
Bse118I RCCGGY 1 cut(s) 2944
Bse1I ACTGG 1 cut(s) 848
Bse3DI GCAATG 2 cut(s) 2046, 2710
Bse8I GATNNNNATC 1 cut(s) 1431
BseAI TCCGGA 1 cut(s) 2293
BseBI CCWGG 2 cut(s) 1764, 2225
BseGI GGATG 3 cut(s) 853, 1326, 2545
BseJI GATNNNNATC 1 cut(s) 1431
BseLI CCNNNNNNNGG 7 cut(s) 575, 661, 1982, 2145, 2378, 2783, 2933
BseMI GCAATG 2 cut(s) 2046, 2710
BseMII CTCAG 8 cut(s) 316, 623, 960, 1016, 1314, 2157, 2436, 2610
BseNI ACTGG 1 cut(s) 848
BseRI GAGGAG 2 cut(s) 191, 986
BseXI GCAGC 1 cut(s) 1081
Bsh1236I CGCG 2 cut(s) 716, 2079
Bsh1285I CGRYCG 1 cut(s) 1649
BshFI GGCC 4 cut(s) 1083, 1113, 1616, 2138
BsiEI CGRYCG 1 cut(s) 1649
BsiHKAI GWGCWC 4 cut(s) 165, 348, 1731, 2086
BsiSI CCGG 2 cut(s) 2294, 2945
BslFI GGGAC 5 cut(s) 263, 846, 1187, 1966, 2592
BslI CCNNNNNNNGG 7 cut(s) 575, 661, 1982, 2145, 2378, 2783, 2933
BsmAI GTCTC 6 cut(s) 353, 425, 1812, 1912, 2222, 2594
BsmFI GGGAC 5 cut(s) 263, 846, 1187, 1966, 2592
BsmI GAATGC 1 cut(s) 160
BsnI GGCC 4 cut(s) 1083, 1113, 1616, 2138
Bso31I GGTCTC 1 cut(s) 2594
Bsp1286I GDGCHC 4 cut(s) 165, 348, 1731, 2086
Bsp13I TCCGGA 1 cut(s) 2293
Bsp1720I GCTNAGC 1 cut(s) 609
BspACI CCGC 4 cut(s) 197, 1876, 2079, 2506
BspANI GGCC 4 cut(s) 1083, 1113, 1616, 2138
BspCNI CTCAG 8 cut(s) 315, 622, 961, 1017, 1313, 2158, 2437, 2611
BspEI TCCGGA 1 cut(s) 2293
BspFNI CGCG 2 cut(s) 716, 2079
BspHI TCATGA 1 cut(s) 1438
BspLI GGNNCC 1 cut(s) 877
BspPI GGATC 1 cut(s) 596
BspTNI GGTCTC 1 cut(s) 2594
BsrDI GCAATG 2 cut(s) 2046, 2710
BsrFI RCCGGY 1 cut(s) 2944
BsrI ACTGG 1 cut(s) 848
BssAI RCCGGY 1 cut(s) 2944
BssNAI GTATAC 1 cut(s) 619
Bst1107I GTATAC 1 cut(s) 619
Bst2UI CCWGG 2 cut(s) 1764, 2225
Bst4CI ACNGT 6 cut(s) 539, 711, 940, 953, 1650, 1959
Bst6I CTCTTC 3 cut(s) 40, 1154, 1518
BstAPI GCANNNNNTGC 1 cut(s) 1001
BstBAI YACGTR 1 cut(s) 284
BstC8I GCNNGC 2 cut(s) 1002, 1206
BstF5I GGATG 3 cut(s) 853, 1326, 2545
BstFNI CGCG 2 cut(s) 716, 2079
BstHHI GCGC 3 cut(s) 1629, 1935, 2079
BstMAI GTCTC 6 cut(s) 353, 425, 1812, 1912, 2222, 2594
BstMCI CGRYCG 1 cut(s) 1649
BstMWI GCNNNNNNNGC 5 cut(s) 220, 1001, 1119, 2135, 2656
BstNI CCWGG 2 cut(s) 1764, 2225
BstNSI RCATGY 3 cut(s) 203, 1004, 2832
BstSCI CCNGG 2 cut(s) 1762, 2223
BstSFI CTRYAG 2 cut(s) 675, 2436
BstUI CGCG 2 cut(s) 716, 2079
BstV1I GCAGC 1 cut(s) 1081
BstV2I GAAGAC 2 cut(s) 1063, 1577
BstX2I RGATCY 2 cut(s) 1330, 1996
BstYI RGATCY 2 cut(s) 1330, 1996
BstZ17I GTATAC 1 cut(s) 619
BsuI GTATCC 1 cut(s) 1373
BsuRI GGCC 4 cut(s) 1083, 1113, 1616, 2138
BtsCI GGATG 3 cut(s) 853, 1326, 2545
BtsI GCAGTG 2 cut(s) 165, 916
BtsIMutI CAGTG 5 cut(s) 165, 544, 916, 2163, 2692
Cac8I GCNNGC 2 cut(s) 1002, 1206
CciI TCATGA 1 cut(s) 1438
CfoI GCGC 3 cut(s) 1629, 1935, 2079
Cfr10I RCCGGY 1 cut(s) 2944
Cfr13I GGNCC 2 cut(s) 1614, 2441
CseI GACGC 2 cut(s) 705, 848
Csp6I GTAC 7 cut(s) 293, 712, 936, 1688, 1795, 2283, 2826
CspCI CAANNNNNGTGG 4 cut(s) 2017, 2052, 2931, 2966
CviQI GTAC 7 cut(s) 293, 712, 936, 1688, 1795, 2283, 2826
DraIII CACNNNGTG 1 cut(s) 911
DrdI GACNNNNNNGTC 1 cut(s) 509
DseDI GACNNNNNNGTC 1 cut(s) 509
Eam1104I CTCTTC 3 cut(s) 40, 1154, 1518
EarI CTCTTC 3 cut(s) 40, 1154, 1518
Eco147I AGGCCT 2 cut(s) 1083, 1113
Eco31I GGTCTC 1 cut(s) 2594
Eco32I GATATC 1 cut(s) 2821
Eco47I GGWCC 1 cut(s) 2441
Eco57I CTGAAG 6 cut(s) 794, 1178, 1347, 2051, 2668, 2867
EcoO109I RGGNCCY 1 cut(s) 2441
EcoRI GAATTC 2 cut(s) 1289, 2270
EcoRII CCWGG 2 cut(s) 1762, 2223
EcoRV GATATC 1 cut(s) 2821
EcoT22I ATGCAT 3 cut(s) 853, 1461, 1840
FalI AAGNNNNNCTT 4 cut(s) 989, 1021, 1151, 1183
FaqI GGGAC 5 cut(s) 263, 846, 1187, 1966, 2592
FauI CCCGC 1 cut(s) 204
FbaI TGATCA 1 cut(s) 1579
FblI GTMKAC 1 cut(s) 618
Fnu4HI GCNGC 1 cut(s) 1095
FokI GGATG 3 cut(s) 860, 1333, 2552
Fsp4HI GCNGC 1 cut(s) 1095
FspBI CTAG 6 cut(s) 693, 812, 2171, 2327, 2660, 2778
FspI TGCGCA 1 cut(s) 1628
GlaI GCGC 3 cut(s) 1628, 1934, 2078
GluI GCNGC 1 cut(s) 1095
GsuI CTGGAG 1 cut(s) 2246
HaeIII GGCC 4 cut(s) 1083, 1113, 1616, 2138
HapII CCGG 2 cut(s) 2294, 2945
HgaI GACGC 2 cut(s) 705, 848
HhaI GCGC 3 cut(s) 1629, 1935, 2079
Hin6I GCGC 3 cut(s) 1627, 1933, 2077
HinP1I GCGC 3 cut(s) 1627, 1933, 2077
HincII GTYRAC 3 cut(s) 85, 109, 520
HindII GTYRAC 3 cut(s) 85, 109, 520
HindIII AAGCTT 1 cut(s) 456
HpaII CCGG 2 cut(s) 2294, 2945
HphI GGTGA 3 cut(s) 941, 1444, 2311
Hpy166II GTNNAC 8 cut(s) 85, 109, 295, 520, 619, 1988, 2693, 2722
Hpy8I GTNNAC 8 cut(s) 85, 109, 295, 520, 619, 1988, 2693, 2722
HpyCH4III ACNGT 6 cut(s) 539, 711, 940, 953, 1650, 1959
HpyCH4IV ACGT 3 cut(s) 283, 1249, 1358
HpyF10VI GCNNNNNNNGC 5 cut(s) 220, 1001, 1119, 2135, 2656
HpySE526I ACGT 3 cut(s) 283, 1249, 1358
HspAI GCGC 3 cut(s) 1627, 1933, 2077
Kpn2I TCCGGA 1 cut(s) 2293
Ksp22I TGATCA 1 cut(s) 1579
LmnI GCTCC 7 cut(s) 23, 343, 875, 1886, 2062, 2081, 2803
Lsp1109I GCAGC 1 cut(s) 1081
LweI GCATC 9 cut(s) 160, 220, 838, 948, 1749, 1825, 1959, 2116, 2850
MaeI CTAG 6 cut(s) 693, 812, 2171, 2327, 2660, 2778
MaeII ACGT 3 cut(s) 283, 1249, 1358
MflI RGATCY 2 cut(s) 1330, 1996
MhlI GDGCHC 4 cut(s) 165, 348, 1731, 2086
MluI ACGCGT 1 cut(s) 714
MlyI GAGTC 4 cut(s) 355, 1535, 2224, 2321
MmeI TCCRAC 8 cut(s) 1341, 1351, 1438, 1494, 1669, 2101, 2260, 2502
Mph1103I ATGCAT 3 cut(s) 853, 1461, 1840
MroI TCCGGA 1 cut(s) 2293
MroXI GAANNNNTTC 1 cut(s) 2922
MseI TTAA 9 cut(s) 131, 225, 768, 1721, 1752, 1961, 2009, 2057, 2420
MslI CAYNNNNRTG 1 cut(s) 1941
MspI CCGG 2 cut(s) 2294, 2945
MspR9I CCNGG 2 cut(s) 1764, 2225
Mva1269I GAATGC 1 cut(s) 160
MvaI CCWGG 2 cut(s) 1764, 2225
MvnI CGCG 2 cut(s) 716, 2079
MwoI GCNNNNNNNGC 5 cut(s) 220, 1001, 1119, 2135, 2656
NlaIV GGNNCC 1 cut(s) 877
NmuCI GTSAC 7 cut(s) 742, 898, 947, 1101, 1163, 1404, 1553
NsbI TGCGCA 1 cut(s) 1628
NsiI ATGCAT 3 cut(s) 853, 1461, 1840
NspI RCATGY 3 cut(s) 203, 1004, 2832
PaeI GCATGC 1 cut(s) 1004
PagI TCATGA 1 cut(s) 1438
PceI AGGCCT 2 cut(s) 1083, 1113
PciI ACATGT 1 cut(s) 2828
PctI GAATGC 1 cut(s) 160
PdmI GAANNNNTTC 1 cut(s) 2922
PfeI GAWTC 8 cut(s) 565, 869, 2201, 2410, 2671, 2678, 2705, 2918
PflMI CCANNNNNTGG 1 cut(s) 2378
PfoI TCCNGGA 1 cut(s) 2223
PkrI GCNGC 1 cut(s) 1096
PleI GAGTC 4 cut(s) 355, 1534, 2224, 2320
PpsI GAGTC 4 cut(s) 355, 1534, 2224, 2320
Ppu21I YACGTR 1 cut(s) 284
PpuMI RGGWCCY 1 cut(s) 2441
PscI ACATGT 1 cut(s) 2828
Psp1406I AACGTT 2 cut(s) 1249, 1358
Psp5II RGGWCCY 1 cut(s) 2441
Psp6I CCWGG 2 cut(s) 1762, 2223
PspGI CCWGG 2 cut(s) 1762, 2223
PspN4I GGNNCC 1 cut(s) 877
PspPI GGNCC 2 cut(s) 1614, 2441
PspPPI RGGWCCY 1 cut(s) 2441
PsuI RGATCY 2 cut(s) 1330, 1996
RsaI GTAC 7 cut(s) 294, 713, 937, 1689, 1796, 2284, 2827
RsaNI GTAC 7 cut(s) 293, 712, 936, 1688, 1795, 2283, 2826
RseI CAYNNNNRTG 1 cut(s) 1941
SaqAI TTAA 9 cut(s) 131, 225, 768, 1721, 1752, 1961, 2009, 2057, 2420
SatI GCNGC 1 cut(s) 1095
Sau96I GGNCC 2 cut(s) 1614, 2441
SchI GAGTC 4 cut(s) 355, 1535, 2224, 2321
ScrFI CCNGG 2 cut(s) 1764, 2225
SduI GDGCHC 4 cut(s) 165, 348, 1731, 2086
SfaNI GCATC 9 cut(s) 160, 220, 838, 948, 1749, 1825, 1959, 2116, 2850
SfcI CTRYAG 2 cut(s) 675, 2436
SinI GGWCC 1 cut(s) 2441
SmiMI CAYNNNNRTG 1 cut(s) 1941
SmlI CTYRAG 3 cut(s) 122, 365, 1399
SmoI CTYRAG 3 cut(s) 122, 365, 1399
SphI GCATGC 1 cut(s) 1004
SseBI AGGCCT 2 cut(s) 1083, 1113
SsiI CCGC 4 cut(s) 197, 1876, 2079, 2506
SspMI CTAG 6 cut(s) 693, 812, 2171, 2327, 2660, 2778
StuI AGGCCT 2 cut(s) 1083, 1113
StyD4I CCNGG 2 cut(s) 1762, 2223
TaaI ACNGT 6 cut(s) 539, 711, 940, 953, 1650, 1959
TaiI ACGT 3 cut(s) 286, 1252, 1361
TaqI TCGA 8 cut(s) 165, 258, 840, 1268, 1386, 1948, 2488, 2961
TaqII GACCGA 1 cut(s) 2832
TfiI GAWTC 8 cut(s) 565, 869, 2201, 2410, 2671, 2678, 2705, 2918
Tru1I TTAA 9 cut(s) 131, 225, 768, 1721, 1752, 1961, 2009, 2057, 2420
Tru9I TTAA 9 cut(s) 131, 225, 768, 1721, 1752, 1961, 2009, 2057, 2420
TscAI CASTG 5 cut(s) 165, 544, 916, 2170, 2692
TseFI GTSAC 7 cut(s) 742, 898, 947, 1101, 1163, 1404, 1553
TseI GCWGC 1 cut(s) 1094
Tsp45I GTSAC 7 cut(s) 742, 898, 947, 1101, 1163, 1404, 1553
TspGWI ACGGA 2 cut(s) 139, 2813
TspRI CASTG 5 cut(s) 165, 544, 916, 2170, 2692
Van91I CCANNNNNTGG 1 cut(s) 2378
VpaK11BI GGWCC 1 cut(s) 2441
XapI RAATTY 7 cut(s) 326, 680, 1289, 1595, 2270, 2761, 2912
XbaI TCTAGA 1 cut(s) 811
XceI RCATGY 3 cut(s) 203, 1004, 2832
XcmI CCANNNNNNNNNTGG 1 cut(s) 2652
XmiI GTMKAC 1 cut(s) 618
XmnI GAANNNNTTC 1 cut(s) 2922
XspI CTAG 6 cut(s) 693, 812, 2171, 2327, 2660, 2778
Zsp2I ATGCAT 3 cut(s) 853, 1461, 1840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.