disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 11 - 100 | 3.9e-16 | Rx N-terminal domain |
| NB-ARC | PF00931 | 180 - 349 | 1.8e-36 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 498 | 1.8e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 568 - 654 | 1.5e-12 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 640 - 919 | 1.6e-18 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 710 - 836 | 1.1e-37 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 885 - 1115 | 2.3e-07 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1806 |
| AatII | GACGTC | 1 cut(s) | 3032 |
| Acc36I | ACCTGC | 3 cut(s) | 1806, 1949, 3402 |
| AccB1I | GGYRCC | 1 cut(s) | 3502 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1622, 2465 |
| AclI | AACGTT | 2 cut(s) | 1723, 1952 |
| AclWI | GGATC | 1 cut(s) | 1818 |
| AcoI | YGGCCR | 2 cut(s) | 1150, 3018 |
| AcuI | CTGAAG | 5 cut(s) | 294, 741, 836, 1785, 2606 |
| AcyI | GRCGYC | 2 cut(s) | 3029, 3218 |
| AdeI | CACNNNGTG | 1 cut(s) | 941 |
| AfaI | GTAC | 3 cut(s) | 1770, 2714, 3600 |
| AflIII | ACRYGT | 1 cut(s) | 695 |
| AjiI | CACGTC | 1 cut(s) | 3276 |
| AjnI | CCWGG | 6 cut(s) | 45, 1806, 1840, 2848, 3846, 3870 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1937, 1969, 2820, 2852 |
| AleI | CACNNNNGTG | 1 cut(s) | 1099 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 105, 137 |
| Alw21I | GWGCWC | 1 cut(s) | 675 |
| Alw26I | GTCTC | 8 cut(s) | 519, 1152, 1391, 1793, 2586, 2675, 3469, 3554 |
| AlwI | GGATC | 1 cut(s) | 1818 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2932, 3526 |
| Ama87I | CYCGRG | 4 cut(s) | 639, 743, 1133, 2672 |
| AoxI | GGCC | 4 cut(s) | 1150, 2790, 3018, 3909 |
| ApeKI | GCWGC | 9 cut(s) | 5, 8, 142, 1598, 1965, 2149, 2182, 2470, 2473 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 219, 251, 3203, 3235 |
| AseI | ATTAAT | 1 cut(s) | 2864 |
| Asp700I | GAANNNNTTC | 8 cut(s) | 67, 117, 1560, 1759, 2885, 3293, 3306, 3735 |
| AspA2I | CCTAGG | 1 cut(s) | 1237 |
| AspLEI | GCGC | 1 cut(s) | 1803 |
| AspS9I | GGNCC | 4 cut(s) | 1641, 2790, 3075, 3909 |
| AsuC2I | CCSGG | 4 cut(s) | 904, 1819, 2119, 3227 |
| AsuHPI | GGTGA | 9 cut(s) | 139, 311, 589, 676, 739, 1787, 2540, 2555, 3310 |
| AsuII | TTCGAA | 1 cut(s) | 2953 |
| AvaI | CYCGRG | 4 cut(s) | 639, 743, 1133, 2672 |
| AvaII | GGWCC | 2 cut(s) | 1641, 3075 |
| AvrII | CCTAGG | 1 cut(s) | 1237 |
| BaeGI | GKGCMC | 1 cut(s) | 3505 |
| BalI | TGGCCA | 1 cut(s) | 1152 |
| BanI | GGYRCC | 1 cut(s) | 3502 |
| BanII | GRGCYC | 1 cut(s) | 646 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 384, 416, 3585, 3617 |
| BauI | CACGAG | 1 cut(s) | 3666 |
| BbsI | GAAGAC | 2 cut(s) | 2074, 2170 |
| Bbv12I | GWGCWC | 1 cut(s) | 675 |
| BbvI | GCAGC | 7 cut(s) | 129, 1585, 1977, 2161, 2169, 2460, 2482 |
| BccI | CCATC | 9 cut(s) | 50, 407, 1342, 1454, 1720, 3010, 3116, 3186, 3841 |
| BceAI | ACGGC | 3 cut(s) | 131, 1416, 1839 |
| BciT130I | CCWGG | 6 cut(s) | 47, 1808, 1842, 2850, 3848, 3872 |
| BclI | TGATCA | 1 cut(s) | 3163 |
| BcnI | CCSGG | 4 cut(s) | 904, 1819, 2119, 3227 |
| BcoDI | GTCTC | 8 cut(s) | 519, 1152, 1391, 1793, 2586, 2675, 3469, 3554 |
| BfaI | CTAG | 5 cut(s) | 1238, 1404, 1509, 2124, 2594 |
| BfmI | CTRYAG | 1 cut(s) | 156 |
| BfuAI | ACCTGC | 3 cut(s) | 1806, 1949, 3402 |
| BglII | AGATCT | 3 cut(s) | 686, 3495, 3852 |
| BlnI | CCTAGG | 1 cut(s) | 1237 |
| BmcAI | AGTACT | 1 cut(s) | 3600 |
| Bme18I | GGWCC | 2 cut(s) | 1641, 3075 |
| BmeT110I | CYCGRG | 4 cut(s) | 639, 743, 1133, 2672 |
| BmgBI | CACGTC | 1 cut(s) | 3276 |
| BmgT120I | GGNCC | 4 cut(s) | 1641, 2790, 3075, 3909 |
| BmiI | GGNNCC | 2 cut(s) | 338, 3504 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1494 |
| BpiI | GAAGAC | 2 cut(s) | 2074, 2170 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3842, 3874 |
| BpmI | CTGGAG | 2 cut(s) | 3869, 3893 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3173 |
| Bpu14I | TTCGAA | 1 cut(s) | 2953 |
| BpuEI | CTTGAG | 4 cut(s) | 2228, 3056, 3274, 3497 |
| BpuMI | CCSGG | 4 cut(s) | 904, 1819, 2119, 3227 |
| BsaAI | YACGTR | 1 cut(s) | 1148 |
| BsaHI | GRCGYC | 2 cut(s) | 3029, 3218 |
| BsaI | GGTCTC | 2 cut(s) | 2586, 3554 |
| BsaJI | CCNNGG | 5 cut(s) | 439, 903, 1237, 2848, 3870 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 105, 135, 2184, 2214, 2547, 2577, 3866, 3896 |
| Bse1I | ACTGG | 2 cut(s) | 2054, 2793 |
| Bse3DI | GCAATG | 1 cut(s) | 1111 |
| BseBI | CCWGG | 6 cut(s) | 47, 1808, 1842, 2850, 3848, 3872 |
| BseDI | CCNNGG | 5 cut(s) | 439, 903, 1237, 2848, 3870 |
| BseMI | GCAATG | 1 cut(s) | 1111 |
| BseMII | CTCAG | 4 cut(s) | 1537, 2672, 2696, 2891 |
| BseNI | ACTGG | 2 cut(s) | 2054, 2793 |
| BseRI | GAGGAG | 1 cut(s) | 3542 |
| BseSI | GKGCMC | 1 cut(s) | 3505 |
| BseXI | GCAGC | 7 cut(s) | 129, 1585, 1977, 2161, 2169, 2460, 2482 |
| BsgI | GTGCAG | 2 cut(s) | 1866, 2168 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1436 |
| BshFI | GGCC | 4 cut(s) | 1152, 2792, 3020, 3911 |
| BshNI | GGYRCC | 1 cut(s) | 3502 |
| BsiEI | CGRYCG | 1 cut(s) | 1436 |
| BsiHKAI | GWGCWC | 1 cut(s) | 675 |
| BsiHKCI | CYCGRG | 4 cut(s) | 639, 743, 1133, 2672 |
| BsiSI | CCGG | 5 cut(s) | 94, 903, 1818, 2118, 3227 |
| BslFI | GGGAC | 4 cut(s) | 956, 1834, 3687, 3762 |
| BsmAI | GTCTC | 8 cut(s) | 519, 1152, 1391, 1793, 2586, 2675, 3469, 3554 |
| BsmBI | CGTCTC | 2 cut(s) | 519, 1391 |
| BsmFI | GGGAC | 4 cut(s) | 956, 1834, 3687, 3762 |
| BsnI | GGCC | 4 cut(s) | 1152, 2792, 3020, 3911 |
| Bso31I | GGTCTC | 2 cut(s) | 2586, 3554 |
| BsoBI | CYCGRG | 4 cut(s) | 639, 743, 1133, 2672 |
| Bsp119I | TTCGAA | 1 cut(s) | 2953 |
| Bsp1286I | GDGCHC | 3 cut(s) | 646, 675, 3505 |
| BspANI | GGCC | 4 cut(s) | 1152, 2792, 3020, 3911 |
| BspCNI | CTCAG | 4 cut(s) | 1536, 2673, 2697, 2892 |
| BspHI | TCATGA | 3 cut(s) | 502, 960, 3007 |
| BspLI | GGNNCC | 2 cut(s) | 338, 3504 |
| BspMAI | CTGCAG | 1 cut(s) | 160 |
| BspMI | ACCTGC | 3 cut(s) | 1806, 1949, 3402 |
| BspPI | GGATC | 1 cut(s) | 1818 |
| BspT104I | TTCGAA | 1 cut(s) | 2953 |
| BspT107I | GGYRCC | 1 cut(s) | 3502 |
| BspTNI | GGTCTC | 2 cut(s) | 2586, 3554 |
| BsrDI | GCAATG | 1 cut(s) | 1111 |
| BsrI | ACTGG | 2 cut(s) | 2054, 2793 |
| BssECI | CCNNGG | 5 cut(s) | 439, 903, 1237, 2848, 3870 |
| BssNI | GRCGYC | 2 cut(s) | 3029, 3218 |
| BssSI | CACGAG | 1 cut(s) | 3666 |
| BssT1I | CCWWGG | 2 cut(s) | 439, 1237 |
| Bst2BI | CACGAG | 1 cut(s) | 3666 |
| Bst2UI | CCWGG | 6 cut(s) | 47, 1808, 1842, 2850, 3848, 3872 |
| Bst6I | CTCTTC | 8 cut(s) | 171, 517, 744, 1389, 1527, 3624, 3699, 3774 |
| BstACI | GRCGYC | 2 cut(s) | 3029, 3218 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1876 |
| BstBAI | YACGTR | 1 cut(s) | 1148 |
| BstBI | TTCGAA | 1 cut(s) | 2953 |
| BstC8I | GCNNGC | 6 cut(s) | 574, 910, 1096, 1914, 2933, 3490 |
| BstHHI | GCGC | 1 cut(s) | 1803 |
| BstMAI | GTCTC | 8 cut(s) | 519, 1152, 1391, 1793, 2586, 2675, 3469, 3554 |
| BstMCI | CGRYCG | 1 cut(s) | 1436 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 103, 621, 997, 1876, 2216, 2314 |
| BstNI | CCWGG | 6 cut(s) | 47, 1808, 1842, 2850, 3848, 3872 |
| BstNSI | RCATGY | 3 cut(s) | 233, 699, 1034 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1494 |
| BstSFI | CTRYAG | 1 cut(s) | 156 |
| BstSLI | GKGCMC | 1 cut(s) | 3505 |
| BstV1I | GCAGC | 7 cut(s) | 129, 1585, 1977, 2161, 2169, 2460, 2482 |
| BstV2I | GAAGAC | 2 cut(s) | 2074, 2170 |
| BstX2I | RGATCY | 4 cut(s) | 686, 1810, 3495, 3852 |
| BstYI | RGATCY | 4 cut(s) | 686, 1810, 3495, 3852 |
| BsuRI | GGCC | 4 cut(s) | 1152, 2792, 3020, 3911 |
| BtgZI | GCGATG | 1 cut(s) | 298 |
| BtrI | CACGTC | 1 cut(s) | 3276 |
| BtsIMutI | CAGTG | 6 cut(s) | 270, 2061, 2437, 2897, 2933, 3075 |
| BveI | ACCTGC | 3 cut(s) | 1806, 1949, 3402 |
| Cac8I | GCNNGC | 6 cut(s) | 574, 910, 1096, 1914, 2933, 3490 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2932, 3526 |
| CciI | TCATGA | 3 cut(s) | 502, 960, 3007 |
| CfoI | GCGC | 1 cut(s) | 1803 |
| Cfr13I | GGNCC | 4 cut(s) | 1641, 2790, 3075, 3909 |
| CseI | GACGC | 2 cut(s) | 148, 3207 |
| CsiI | ACCWGGT | 1 cut(s) | 1840 |
| Csp6I | GTAC | 3 cut(s) | 1769, 2713, 3599 |
| CviQI | GTAC | 3 cut(s) | 1769, 2713, 3599 |
| DraIII | CACNNNGTG | 1 cut(s) | 941 |
| EaeI | YGGCCR | 2 cut(s) | 1150, 3018 |
| Eam1104I | CTCTTC | 8 cut(s) | 171, 517, 744, 1389, 1527, 3624, 3699, 3774 |
| EarI | CTCTTC | 8 cut(s) | 171, 517, 744, 1389, 1527, 3624, 3699, 3774 |
| EciI | GGCGGA | 1 cut(s) | 3856 |
| Eco130I | CCWWGG | 2 cut(s) | 439, 1237 |
| Eco24I | GRGCYC | 1 cut(s) | 646 |
| Eco31I | GGTCTC | 2 cut(s) | 2586, 3554 |
| Eco32I | GATATC | 2 cut(s) | 1225, 3918 |
| Eco47I | GGWCC | 2 cut(s) | 1641, 3075 |
| Eco57I | CTGAAG | 5 cut(s) | 294, 741, 836, 1785, 2606 |
| Eco88I | CYCGRG | 4 cut(s) | 639, 743, 1133, 2672 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3075 |
| EcoRI | GAATTC | 5 cut(s) | 2534, 2818, 3306, 3656, 3731 |
| EcoRII | CCWGG | 6 cut(s) | 45, 1806, 1840, 2848, 3846, 3870 |
| EcoRV | GATATC | 2 cut(s) | 1225, 3918 |
| EcoT14I | CCWWGG | 2 cut(s) | 439, 1237 |
| EcoT22I | ATGCAT | 2 cut(s) | 1476, 2212 |
| EcoT38I | GRGCYC | 1 cut(s) | 646 |
| ErhI | CCWWGG | 2 cut(s) | 439, 1237 |
| Esp3I | CGTCTC | 2 cut(s) | 519, 1391 |
| FaqI | GGGAC | 4 cut(s) | 956, 1834, 3687, 3762 |
| FauI | CCCGC | 1 cut(s) | 608 |
| FauNDI | CATATG | 2 cut(s) | 1576, 3959 |
| FbaI | TGATCA | 1 cut(s) | 3163 |
| FriOI | GRGCYC | 1 cut(s) | 646 |
| FspBI | CTAG | 5 cut(s) | 1238, 1404, 1509, 2124, 2594 |
| GlaI | GCGC | 1 cut(s) | 1802 |
| GsuI | CTGGAG | 2 cut(s) | 3869, 3893 |
| HaeIII | GGCC | 4 cut(s) | 1152, 2792, 3020, 3911 |
| HapII | CCGG | 5 cut(s) | 94, 903, 1818, 2118, 3227 |
| HgaI | GACGC | 2 cut(s) | 148, 3207 |
| HhaI | GCGC | 1 cut(s) | 1803 |
| Hin1I | GRCGYC | 2 cut(s) | 3029, 3218 |
| Hin6I | GCGC | 1 cut(s) | 1801 |
| HinP1I | GCGC | 1 cut(s) | 1801 |
| HincII | GTYRAC | 1 cut(s) | 1950 |
| HindII | GTYRAC | 1 cut(s) | 1950 |
| HindIII | AAGCTT | 2 cut(s) | 276, 1834 |
| HpaI | GTTAAC | 1 cut(s) | 1950 |
| HpaII | CCGG | 5 cut(s) | 94, 903, 1818, 2118, 3227 |
| HphI | GGTGA | 9 cut(s) | 139, 311, 589, 676, 739, 1787, 2540, 2555, 3310 |
| Hpy166II | GTNNAC | 4 cut(s) | 473, 1727, 1950, 2895 |
| Hpy8I | GTNNAC | 4 cut(s) | 473, 1727, 1950, 2895 |
| Hpy99I | CGWCG | 2 cut(s) | 221, 3950 |
| HpyCH4IV | ACGT | 7 cut(s) | 1147, 1723, 1874, 1952, 3029, 3275, 3415 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 103, 621, 997, 1876, 2216, 2314 |
| HpySE526I | ACGT | 7 cut(s) | 1147, 1723, 1874, 1952, 3029, 3275, 3415 |
| Hsp92I | GRCGYC | 2 cut(s) | 3029, 3218 |
| HspAI | GCGC | 1 cut(s) | 1801 |
| Ksp22I | TGATCA | 1 cut(s) | 3163 |
| KspAI | GTTAAC | 1 cut(s) | 1950 |
| LmnI | GCTCC | 7 cut(s) | 1201, 1270, 1973, 2322, 2555, 3528, 3534 |
| Lsp1109I | GCAGC | 7 cut(s) | 129, 1585, 1977, 2161, 2169, 2460, 2482 |
| MabI | ACCWGGT | 1 cut(s) | 1840 |
| MaeI | CTAG | 5 cut(s) | 1238, 1404, 1509, 2124, 2594 |
| MaeII | ACGT | 7 cut(s) | 1147, 1723, 1874, 1952, 3029, 3275, 3415 |
| MfeI | CAATTG | 1 cut(s) | 1827 |
| MflI | RGATCY | 4 cut(s) | 686, 1810, 3495, 3852 |
| MhlI | GDGCHC | 3 cut(s) | 646, 675, 3505 |
| MlsI | TGGCCA | 1 cut(s) | 1152 |
| MluNI | TGGCCA | 1 cut(s) | 1152 |
| MlyI | GAGTC | 3 cut(s) | 755, 2644, 3047 |
| MmeI | TCCRAC | 7 cut(s) | 509, 822, 992, 1088, 1509, 2344, 3764 |
| Mox20I | TGGCCA | 1 cut(s) | 1152 |
| Mph1103I | ATGCAT | 2 cut(s) | 1476, 2212 |
| MroXI | GAANNNNTTC | 8 cut(s) | 67, 117, 1560, 1759, 2885, 3293, 3306, 3735 |
| MscI | TGGCCA | 1 cut(s) | 1152 |
| MslI | CAYNNNNRTG | 3 cut(s) | 47, 1099, 2778 |
| Msp20I | TGGCCA | 1 cut(s) | 1152 |
| MspA1I | CMGCKG | 1 cut(s) | 2473 |
| MspI | CCGG | 5 cut(s) | 94, 903, 1818, 2118, 3227 |
| MunI | CAATTG | 1 cut(s) | 1827 |
| MvaI | CCWGG | 6 cut(s) | 47, 1808, 1842, 2850, 3848, 3872 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 103, 621, 997, 1876, 2216, 2314 |
| NciI | CCSGG | 4 cut(s) | 904, 1819, 2119, 3227 |
| NdeI | CATATG | 2 cut(s) | 1576, 3959 |
| NlaIV | GGNNCC | 2 cut(s) | 338, 3504 |
| NmuCI | GTSAC | 6 cut(s) | 56, 83, 727, 751, 1743, 3030 |
| NsiI | ATGCAT | 2 cut(s) | 1476, 2212 |
| NspI | RCATGY | 3 cut(s) | 233, 699, 1034 |
| NspV | TTCGAA | 1 cut(s) | 2953 |
| OliI | CACNNNNGTG | 1 cut(s) | 1099 |
| PaeR7I | CTCGAG | 3 cut(s) | 639, 743, 2672 |
| PagI | TCATGA | 3 cut(s) | 502, 960, 3007 |
| PaqCI | CACCTGC | 1 cut(s) | 1806 |
| PciI | ACATGT | 1 cut(s) | 695 |
| PdmI | GAANNNNTTC | 8 cut(s) | 67, 117, 1560, 1759, 2885, 3293, 3306, 3735 |
| PfeI | GAWTC | 8 cut(s) | 499, 1541, 1775, 2285, 2355, 3133, 3140, 3346 |
| PflFI | GACNNNGTC | 3 cut(s) | 221, 1563, 3950 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1622, 2465 |
| PfoI | TCCNGGA | 2 cut(s) | 1817, 3225 |
| Ple19I | CGATCG | 1 cut(s) | 1436 |
| PleI | GAGTC | 3 cut(s) | 754, 2643, 3046 |
| PpsI | GAGTC | 3 cut(s) | 754, 2643, 3046 |
| Ppu21I | YACGTR | 1 cut(s) | 1148 |
| PpuMI | RGGWCCY | 1 cut(s) | 3075 |
| PscI | ACATGT | 1 cut(s) | 695 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1494 |
| PshBI | ATTAAT | 1 cut(s) | 2864 |
| Psp1406I | AACGTT | 2 cut(s) | 1723, 1952 |
| Psp5II | RGGWCCY | 1 cut(s) | 3075 |
| Psp6I | CCWGG | 6 cut(s) | 45, 1806, 1840, 2848, 3846, 3870 |
| PspGI | CCWGG | 6 cut(s) | 45, 1806, 1840, 2848, 3846, 3870 |
| PspN4I | GGNNCC | 2 cut(s) | 338, 3504 |
| PspPI | GGNCC | 4 cut(s) | 1641, 2790, 3075, 3909 |
| PspPPI | RGGWCCY | 1 cut(s) | 3075 |
| PspXI | VCTCGAGB | 1 cut(s) | 639 |
| PstI | CTGCAG | 1 cut(s) | 160 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2932, 3526 |
| PsuI | RGATCY | 4 cut(s) | 686, 1810, 3495, 3852 |
| PsyI | GACNNNGTC | 3 cut(s) | 221, 1563, 3950 |
| PvuI | CGATCG | 1 cut(s) | 1436 |
| PvuII | CAGCTG | 1 cut(s) | 2473 |
| RsaI | GTAC | 3 cut(s) | 1770, 2714, 3600 |
| RsaNI | GTAC | 3 cut(s) | 1769, 2713, 3599 |
| RseI | CAYNNNNRTG | 3 cut(s) | 47, 1099, 2778 |
| Sau96I | GGNCC | 4 cut(s) | 1641, 2790, 3075, 3909 |
| ScaI | AGTACT | 1 cut(s) | 3600 |
| SchI | GAGTC | 3 cut(s) | 755, 2644, 3047 |
| SduI | GDGCHC | 3 cut(s) | 646, 675, 3505 |
| SexAI | ACCWGGT | 1 cut(s) | 1840 |
| SfcI | CTRYAG | 1 cut(s) | 156 |
| Sfr274I | CTCGAG | 3 cut(s) | 639, 743, 2672 |
| SfuI | TTCGAA | 1 cut(s) | 2953 |
| SinI | GGWCC | 2 cut(s) | 1641, 3075 |
| SlaI | CTCGAG | 3 cut(s) | 639, 743, 2672 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 47, 1099, 2778 |
| SmlI | CTYRAG | 7 cut(s) | 639, 743, 2243, 2672, 3035, 3253, 3512 |
| SmoI | CTYRAG | 7 cut(s) | 639, 743, 2243, 2672, 3035, 3253, 3512 |
| SspI | AATATT | 2 cut(s) | 3401, 3709 |
| SspMI | CTAG | 5 cut(s) | 1238, 1404, 1509, 2124, 2594 |
| StyI | CCWWGG | 2 cut(s) | 439, 1237 |
| TaiI | ACGT | 7 cut(s) | 1150, 1726, 1877, 1955, 3032, 3278, 3418 |
| TaqII | GACCGA | 2 cut(s) | 739, 2568 |
| TatI | WGTACW | 1 cut(s) | 3598 |
| TauI | GCSGC | 2 cut(s) | 1124, 3832 |
| TfiI | GAWTC | 8 cut(s) | 499, 1541, 1775, 2285, 2355, 3133, 3140, 3346 |
| TscAI | CASTG | 6 cut(s) | 277, 2061, 2437, 2904, 2933, 3075 |
| TseFI | GTSAC | 6 cut(s) | 56, 83, 727, 751, 1743, 3030 |
| TseI | GCWGC | 9 cut(s) | 5, 8, 142, 1598, 1965, 2149, 2182, 2470, 2473 |
| Tsp45I | GTSAC | 6 cut(s) | 56, 83, 727, 751, 1743, 3030 |
| TspGWI | ACGGA | 6 cut(s) | 71, 543, 1257, 1957, 3246, 3952 |
| TspRI | CASTG | 6 cut(s) | 277, 2061, 2437, 2904, 2933, 3075 |
| Tth111I | GACNNNGTC | 3 cut(s) | 221, 1563, 3950 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1622, 2465 |
| VpaK11BI | GGWCC | 2 cut(s) | 1641, 3075 |
| VspI | ATTAAT | 1 cut(s) | 2864 |
| XceI | RCATGY | 3 cut(s) | 233, 699, 1034 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 607, 2800 |
| XhoI | CTCGAG | 3 cut(s) | 639, 743, 2672 |
| XmaJI | CCTAGG | 1 cut(s) | 1237 |
| XmnI | GAANNNNTTC | 8 cut(s) | 67, 117, 1560, 1759, 2885, 3293, 3306, 3735 |
| XspI | CTAG | 5 cut(s) | 1238, 1404, 1509, 2124, 2594 |
| ZraI | GACGTC | 1 cut(s) | 3030 |
| ZrmI | AGTACT | 1 cut(s) | 3600 |
| Zsp2I | ATGCAT | 2 cut(s) | 1476, 2212 |