MD07G1050900.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
4370375 .. 4371929
1555 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1050900.v1.1.491

Sequence Viewer

Length: 1512 bp
ATGCATGATCTCATTAACGACTTGGCTATGTCTGTGTCTGGAGAATTTTGTTTTAGGTTGGGTGAGGGACAACCACATGAAGTTCCTAAACGAGTTCGGCATTTGTCATATATGAGAGAAAGATTTGATACCGTAGCAAAATTTAAGCCATTGGATGAAATTAAGTGTTTGCGCACCTTGTTTCCCATGTCTTTAAGACCATACTATAAGTGGGATAAGAGCCTATATGTAAGCATAAAGGTTCTAGAGGATTTGTTACTAGCACAAAGATGTTTACGGGTGTTGTCATTGGCAAGATATAAAAATATAACTCAGTTACCTGATAACATTGGTAAACACTTAAGCTTGCGCTACATCGACCTCTCTTACACTGCAGTTAAAACGTTACCAAATACGATGTGTGAGCTCTACAATTTGCAAACTCTATTATTGTTAGGTTGTTCCTCTCTTGTTGAATTGCCTGCAGACATGAGGAAATTGATTAATTTGCGTCTTCTTGATATTAGAGAAACTTGTATAAAAGAGATGCCGGTGCAAATGGGTAGACTAAAAAGTTTGAGTACATTGACTGCTTTTGTGTTGGGGAAATCTACAAGGTCAAGTGGCATTGGAGAACTGGGGCAATTGTCGAACCTTCGAGGAAAACTATCTATCTTGAATCTGCAAAATGTAGTCAATCCTATGGATGCCTTGGGGGCCAATTTGAAGGATAAGAAAGACCTTCACGAAGTAGAGTTGGCATGGGGTCATGAGGATGCAAATGATTCCGTAAAAGAGAGACATGTACTTGAAAGCCTACAACCTTCCGTAAATTTGGTGAAGCTGACCATCAGATTTTATGGTGGAACTACGTTTCCGGATTGGTTGGGAGACTCTTCCTTCTCCAGCATACAAGTCATGCATCTCACTGATTGTAGTACTTGCTTGTCATTGCCACCAGTTGGAAGGTTACCCGCCCTCAAAGAGCTCTATATAGAAAGGATGAAATTTGTTGTGAGTATTGATGTTGAGTTCTACGGGGGTAATGGAGCTTCTCTAAGTCAACCATTTCAATCTCTCAGGAAGCTAGTGTTTAAAGAGATGCCGGAGTGGGAGGAATGGCTGTCAAGTCCAGGTAGTGGTCAATCTTGCTTTCCTTGTCTTGAGGTGCTTATTTTACACAATTGTCCGAAGTTGAGAGGAAACTTACCTCATCGTCTTCCTTGCTTGAGACAACTTGAAGTGGACGACTGCAGGGTTCTGCATGAAAGGGCTACCAGAACAAGATGGATACCCTGGTCTCTCATCGTTAACACGGAATCCTTGCGACAATCTCTTAAAGAACTGAAGATAGTTAGATGCCCTGGTCTCTCGTCGTTACTCGAGACGGAGTCGCTGTCCTCGCTTTGGAGGCTTGGGATTCAAATTTTTAGTAGCACAGATTGCTTGCAGCCGCACTTCAGCAGTTGTCTTGAAAGATTGAGTCTCGTTAACTGCGCGTCACTCTTGTCGTTCCCGAGAAACGGAGATTAG

Protein Analysis

504

Amino Acids

57.16

Weight (kDa)

8.58

Isoelectric Point (pI)

48.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 88 - 362 1.5e-25 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 203 - 328 2.7e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 173
AccB7I CCANNNNNTGG 2 cut(s) 941, 1118
AccI GTMKAC 1 cut(s) 544
AccII CGCG 1 cut(s) 1478
AccIII TCCGGA 1 cut(s) 856
AciI CCGC 2 cut(s) 954, 1433
AclI AACGTT 1 cut(s) 383
AcsI RAATTY 5 cut(s) 44, 140, 811, 986, 1404
AcuI CTGAAG 2 cut(s) 1346, 1423
AfaI GTAC 3 cut(s) 562, 786, 919
AfiI CCNNNNNNNGG 4 cut(s) 941, 1118, 1386, 1502
AflII CTTAAG 1 cut(s) 340
AflIII ACRYGT 1 cut(s) 781
AgsI TTSAA 8 cut(s) 455, 658, 706, 791, 1052, 1220, 1403, 1454
AjnI CCWGG 3 cut(s) 1111, 1274, 1342
AloI GAACNNNNNNTCC 2 cut(s) 838, 870
AluBI AGCT 6 cut(s) 345, 406, 823, 967, 1031, 1066
AluI AGCT 6 cut(s) 345, 406, 823, 967, 1031, 1066
Alw21I GWGCWC 2 cut(s) 408, 969
Alw26I GTCTC 7 cut(s) 772, 864, 1204, 1284, 1352, 1358, 1469
Ama87I CYCGRG 2 cut(s) 1361, 1495
Aor13HI TCCGGA 1 cut(s) 856
AoxI GGCC 1 cut(s) 696
ApeKI GCWGC 1 cut(s) 1429
ApoI RAATTY 5 cut(s) 44, 140, 811, 986, 1404
AseI ATTAAT 1 cut(s) 483
AspLEI GCGC 3 cut(s) 174, 351, 1478
AspS9I GGNCC 1 cut(s) 696
AsuHPI GGTGA 2 cut(s) 74, 829
AvaI CYCGRG 2 cut(s) 1361, 1495
BaeI ACNNNNGTAYC 2 cut(s) 1262, 1295
BanII GRGCYC 2 cut(s) 408, 969
BarI GAAGNNNNNNTAC 2 cut(s) 1015, 1047
BbsI GAAGAC 2 cut(s) 485, 1190
Bbv12I GWGCWC 2 cut(s) 408, 969
BbvI GCAGC 1 cut(s) 1441
BccI CCATC 2 cut(s) 836, 1260
BciT130I CCWGG 3 cut(s) 1113, 1276, 1344
BciVI GTATCC 1 cut(s) 1263
BcoDI GTCTC 7 cut(s) 772, 864, 1204, 1284, 1352, 1358, 1469
BfaI CTAG 3 cut(s) 245, 260, 1067
BfmI CTRYAG 3 cut(s) 372, 462, 1231
BfrI CTTAAG 1 cut(s) 340
BfuI GTATCC 1 cut(s) 1263
BglI GCCNNNNNGGC 1 cut(s) 695
BisI GCNGC 2 cut(s) 1430, 1433
BlsI GCNGC 2 cut(s) 1431, 1434
BmcAI AGTACT 1 cut(s) 919
Bme1390I CCNGG 3 cut(s) 1113, 1276, 1344
BmeT110I CYCGRG 2 cut(s) 1361, 1495
BmgT120I GGNCC 1 cut(s) 696
BmiI GGNNCC 1 cut(s) 697
BmrFI CCNGG 3 cut(s) 1113, 1276, 1344
BmrI ACTGGG 1 cut(s) 626
BmsI GCATC 6 cut(s) 516, 676, 745, 910, 1071, 1328
BmuI ACTGGG 1 cut(s) 626
BpiI GAAGAC 2 cut(s) 485, 1190
BpmI CTGGAG 2 cut(s) 60, 868
BpuEI CTTGAG 2 cut(s) 1163, 1228
BsaI GGTCTC 2 cut(s) 1284, 1352
BsaJI CCNNGG 3 cut(s) 690, 1274, 1342
BsaWI WCCGGW 1 cut(s) 856
BsaXI ACNNNNNCTCC 2 cut(s) 1361, 1391
Bsc4I CCNNNNNNNGG 4 cut(s) 941, 1118, 1386, 1502
Bse118I RCCGGY 1 cut(s) 529
Bse1I ACTGG 2 cut(s) 621, 938
Bse3DI GCAATG 1 cut(s) 929
BseAI TCCGGA 1 cut(s) 856
BseBI CCWGG 3 cut(s) 1113, 1276, 1344
BseDI CCNNGG 3 cut(s) 690, 1274, 1342
BseGI GGATG 4 cut(s) 160, 691, 760, 987
BseLI CCNNNNNNNGG 4 cut(s) 941, 1118, 1386, 1502
BseMI GCAATG 1 cut(s) 929
BseMII CTCAG 2 cut(s) 326, 1072
BseNI ACTGG 2 cut(s) 621, 938
BseXI GCAGC 1 cut(s) 1441
Bsh1236I CGCG 1 cut(s) 1478
BshFI GGCC 1 cut(s) 698
BsiHKAI GWGCWC 2 cut(s) 408, 969
BsiHKCI CYCGRG 2 cut(s) 1361, 1495
BsiSI CCGG 3 cut(s) 530, 857, 1085
BslFI GGGAC 1 cut(s) 81
BslI CCNNNNNNNGG 4 cut(s) 941, 1118, 1386, 1502
BsmAI GTCTC 7 cut(s) 772, 864, 1204, 1284, 1352, 1358, 1469
BsmBI CGTCTC 1 cut(s) 1358
BsmFI GGGAC 1 cut(s) 81
BsnI GGCC 1 cut(s) 698
Bso31I GGTCTC 2 cut(s) 1284, 1352
BsoBI CYCGRG 2 cut(s) 1361, 1495
Bsp1286I GDGCHC 2 cut(s) 408, 969
Bsp13I TCCGGA 1 cut(s) 856
Bsp143I GATC 1 cut(s) 7
BspACI CCGC 2 cut(s) 954, 1433
BspANI GGCC 1 cut(s) 698
BspCNI CTCAG 2 cut(s) 325, 1071
BspEI TCCGGA 1 cut(s) 856
BspFNI CGCG 1 cut(s) 1478
BspHI TCATGA 1 cut(s) 748
BspLI GGNNCC 1 cut(s) 697
BspMAI CTGCAG 3 cut(s) 376, 466, 1235
BspTI CTTAAG 1 cut(s) 340
BspTNI GGTCTC 2 cut(s) 1284, 1352
BsrDI GCAATG 1 cut(s) 929
BsrFI RCCGGY 1 cut(s) 529
BsrI ACTGG 2 cut(s) 621, 938
BssAI RCCGGY 1 cut(s) 529
BssECI CCNNGG 3 cut(s) 690, 1274, 1342
BssMI GATC 1 cut(s) 7
BssT1I CCWWGG 1 cut(s) 690
Bst2UI CCWGG 3 cut(s) 1113, 1276, 1344
Bst4CI ACNGT 1 cut(s) 133
Bst6I CTCTTC 1 cut(s) 880
BstAFI CTTAAG 1 cut(s) 340
BstAPI GCANNNNNTGC 1 cut(s) 1422
BstC8I GCNNGC 3 cut(s) 347, 462, 1427
BstDEI CTNAG 3 cut(s) 312, 1037, 1058
BstEII GGTNACC 1 cut(s) 948
BstF5I GGATG 4 cut(s) 160, 691, 760, 987
BstFNI CGCG 1 cut(s) 1478
BstHHI GCGC 3 cut(s) 174, 351, 1478
BstKTI GATC 1 cut(s) 10
BstMAI GTCTC 7 cut(s) 772, 864, 1204, 1284, 1352, 1358, 1469
BstMBI GATC 1 cut(s) 7
BstMWI GCNNNNNNNGC 4 cut(s) 695, 1381, 1390, 1422
BstNI CCWGG 3 cut(s) 1113, 1276, 1344
BstNSI RCATGY 1 cut(s) 785
BstPI GGTNACC 1 cut(s) 948
BstSCI CCNGG 3 cut(s) 1111, 1274, 1342
BstSFI CTRYAG 3 cut(s) 372, 462, 1231
BstUI CGCG 1 cut(s) 1478
BstV1I GCAGC 1 cut(s) 1441
BstV2I GAAGAC 2 cut(s) 485, 1190
BsuI GTATCC 1 cut(s) 1263
BsuRI GGCC 1 cut(s) 698
BtsCI GGATG 4 cut(s) 160, 691, 760, 987
BtsI GCAGTG 1 cut(s) 369
BtsIMutI CAGTG 2 cut(s) 369, 906
Cac8I GCNNGC 3 cut(s) 347, 462, 1427
CciI TCATGA 1 cut(s) 748
CfoI GCGC 3 cut(s) 174, 351, 1478
Cfr10I RCCGGY 1 cut(s) 529
Cfr13I GGNCC 1 cut(s) 696
CseI GACGC 2 cut(s) 479, 1467
Csp6I GTAC 3 cut(s) 561, 785, 918
CviAII CATG 9 cut(s) 5, 77, 187, 469, 741, 749, 782, 898, 1244
CviQI GTAC 3 cut(s) 561, 785, 918
DdeI CTNAG 3 cut(s) 312, 1037, 1058
DpnI GATC 1 cut(s) 9
DpnII GATC 1 cut(s) 7
DraI TTTAAA 1 cut(s) 1075
Eam1104I CTCTTC 1 cut(s) 880
EarI CTCTTC 1 cut(s) 880
Ecl136II GAGCTC 2 cut(s) 406, 967
Eco130I CCWWGG 1 cut(s) 690
Eco24I GRGCYC 2 cut(s) 408, 969
Eco31I GGTCTC 2 cut(s) 1284, 1352
Eco53kI GAGCTC 2 cut(s) 406, 967
Eco57I CTGAAG 2 cut(s) 1346, 1423
Eco88I CYCGRG 2 cut(s) 1361, 1495
Eco91I GGTNACC 1 cut(s) 948
EcoICRI GAGCTC 2 cut(s) 406, 967
EcoO65I GGTNACC 1 cut(s) 948
EcoRII CCWGG 3 cut(s) 1111, 1274, 1342
EcoT14I CCWWGG 1 cut(s) 690
EcoT22I ATGCAT 2 cut(s) 6, 903
EcoT38I GRGCYC 2 cut(s) 408, 969
ErhI CCWWGG 1 cut(s) 690
Esp3I CGTCTC 1 cut(s) 1358
FaeI CATG 9 cut(s) 8, 80, 190, 472, 744, 752, 785, 901, 1247
FaqI GGGAC 1 cut(s) 81
FatI CATG 9 cut(s) 4, 76, 186, 468, 740, 748, 781, 897, 1243
FauI CCCGC 1 cut(s) 961
FblI GTMKAC 1 cut(s) 544
Fnu4HI GCNGC 2 cut(s) 1430, 1433
FokI GGATG 4 cut(s) 167, 698, 767, 994
FriOI GRGCYC 2 cut(s) 408, 969
Fsp4HI GCNGC 2 cut(s) 1430, 1433
FspBI CTAG 3 cut(s) 245, 260, 1067
FspI TGCGCA 1 cut(s) 173
GlaI GCGC 3 cut(s) 173, 350, 1477
GluI GCNGC 2 cut(s) 1430, 1433
GsuI CTGGAG 2 cut(s) 60, 868
HaeIII GGCC 1 cut(s) 698
HapII CCGG 3 cut(s) 530, 857, 1085
HgaI GACGC 2 cut(s) 479, 1467
HhaI GCGC 3 cut(s) 174, 351, 1478
Hin1II CATG 9 cut(s) 8, 80, 190, 472, 744, 752, 785, 901, 1247
Hin6I GCGC 3 cut(s) 172, 349, 1476
HinP1I GCGC 3 cut(s) 172, 349, 1476
HincII GTYRAC 3 cut(s) 1043, 1291, 1471
HindII GTYRAC 3 cut(s) 1043, 1291, 1471
HindIII AAGCTT 1 cut(s) 343
HinfI GANTC 7 cut(s) 658, 764, 872, 1298, 1370, 1399, 1462
HpaI GTTAAC 2 cut(s) 1291, 1471
HpaII CCGG 3 cut(s) 530, 857, 1085
HphI GGTGA 2 cut(s) 74, 829
Hpy166II GTNNAC 7 cut(s) 275, 335, 545, 1043, 1225, 1291, 1471
Hpy188I TCNGA 2 cut(s) 833, 1170
Hpy8I GTNNAC 7 cut(s) 275, 335, 545, 1043, 1225, 1291, 1471
Hpy99I CGWCG 1 cut(s) 1357
HpyAV CCTTC 6 cut(s) 644, 700, 731, 813, 889, 939
HpyCH4III ACNGT 1 cut(s) 133
HpyCH4IV ACGT 2 cut(s) 383, 851
HpyF10VI GCNNNNNNNGC 4 cut(s) 695, 1381, 1390, 1422
HpyF3I CTNAG 3 cut(s) 312, 1037, 1058
HpySE526I ACGT 2 cut(s) 383, 851
Hsp92II CATG 9 cut(s) 8, 80, 190, 472, 744, 752, 785, 901, 1247
HspAI GCGC 3 cut(s) 172, 349, 1476
Kpn2I TCCGGA 1 cut(s) 856
KspAI GTTAAC 2 cut(s) 1291, 1471
Kzo9I GATC 1 cut(s) 7
LmnI GCTCC 1 cut(s) 1028
Lsp1109I GCAGC 1 cut(s) 1441
LweI GCATC 6 cut(s) 516, 676, 745, 910, 1071, 1328
MaeI CTAG 3 cut(s) 245, 260, 1067
MaeII ACGT 2 cut(s) 383, 851
MaeIII GTNAC 6 cut(s) 255, 315, 384, 948, 1356, 1479
MalI GATC 1 cut(s) 9
MboI GATC 1 cut(s) 7
MboII GAAGA 4 cut(s) 485, 867, 1190, 1339
MfeI CAATTG 2 cut(s) 623, 1162
MhlI GDGCHC 2 cut(s) 408, 969
MlyI GAGTC 3 cut(s) 866, 1379, 1471
MmeI TCCRAC 1 cut(s) 922
Mph1103I ATGCAT 2 cut(s) 6, 903
MroI TCCGGA 1 cut(s) 856
MslI CAYNNNNRTG 2 cut(s) 268, 753
MspCI CTTAAG 1 cut(s) 340
MspI CCGG 3 cut(s) 530, 857, 1085
MspR9I CCNGG 3 cut(s) 1113, 1276, 1344
MunI CAATTG 2 cut(s) 623, 1162
MvaI CCWGG 3 cut(s) 1113, 1276, 1344
MvnI CGCG 1 cut(s) 1478
MwoI GCNNNNNNNGC 4 cut(s) 695, 1381, 1390, 1422
NdeII GATC 1 cut(s) 7
NlaIII CATG 9 cut(s) 8, 80, 190, 472, 744, 752, 785, 901, 1247
NlaIV GGNNCC 1 cut(s) 697
NmuCI GTSAC 1 cut(s) 1479
NsbI TGCGCA 1 cut(s) 173
NsiI ATGCAT 2 cut(s) 6, 903
NspI RCATGY 1 cut(s) 785
PaeR7I CTCGAG 1 cut(s) 1361
PagI TCATGA 1 cut(s) 748
PciI ACATGT 1 cut(s) 781
PfeI GAWTC 4 cut(s) 658, 764, 1298, 1399
PflFI GACNNNGTC 1 cut(s) 1369
PflMI CCANNNNNTGG 2 cut(s) 941, 1118
PkrI GCNGC 2 cut(s) 1431, 1434
PleI GAGTC 3 cut(s) 866, 1378, 1470
PpsI GAGTC 3 cut(s) 866, 1378, 1470
PscI ACATGT 1 cut(s) 781
PshBI ATTAAT 1 cut(s) 483
Psp124BI GAGCTC 2 cut(s) 408, 969
Psp1406I AACGTT 1 cut(s) 383
Psp6I CCWGG 3 cut(s) 1111, 1274, 1342
PspEI GGTNACC 1 cut(s) 948
PspGI CCWGG 3 cut(s) 1111, 1274, 1342
PspN4I GGNNCC 1 cut(s) 697
PspPI GGNCC 1 cut(s) 696
PstI CTGCAG 3 cut(s) 376, 466, 1235
PsyI GACNNNGTC 1 cut(s) 1369
RsaI GTAC 3 cut(s) 562, 786, 919
RsaNI GTAC 3 cut(s) 561, 785, 918
RseI CAYNNNNRTG 2 cut(s) 268, 753
SacI GAGCTC 2 cut(s) 408, 969
SatI GCNGC 2 cut(s) 1430, 1433
Sau3AI GATC 1 cut(s) 7
Sau96I GGNCC 1 cut(s) 696
ScaI AGTACT 1 cut(s) 919
SchI GAGTC 3 cut(s) 866, 1379, 1471
ScrFI CCNGG 3 cut(s) 1113, 1276, 1344
SduI GDGCHC 2 cut(s) 408, 969
SfaNI GCATC 6 cut(s) 516, 676, 745, 910, 1071, 1328
SfcI CTRYAG 3 cut(s) 372, 462, 1231
Sfr274I CTCGAG 1 cut(s) 1361
SlaI CTCGAG 1 cut(s) 1361
SmiMI CAYNNNNRTG 2 cut(s) 268, 753
SmlI CTYRAG 4 cut(s) 340, 1142, 1207, 1361
SmoI CTYRAG 4 cut(s) 340, 1142, 1207, 1361
SsiI CCGC 2 cut(s) 954, 1433
SspMI CTAG 3 cut(s) 245, 260, 1067
SstI GAGCTC 2 cut(s) 408, 969
StyD4I CCNGG 3 cut(s) 1111, 1274, 1342
StyI CCWWGG 1 cut(s) 690
TaaI ACNGT 1 cut(s) 133
TaiI ACGT 2 cut(s) 386, 854
TaqI TCGA 4 cut(s) 357, 629, 637, 1362
TatI WGTACW 3 cut(s) 560, 784, 917
TauI GCSGC 1 cut(s) 1435
TfiI GAWTC 4 cut(s) 658, 764, 1298, 1399
TscAI CASTG 2 cut(s) 376, 913
TseFI GTSAC 1 cut(s) 1479
TseI GCWGC 1 cut(s) 1429
Tsp45I GTSAC 1 cut(s) 1479
TspDTI ATGAA 4 cut(s) 93, 171, 998, 1260
TspGWI ACGGA 4 cut(s) 757, 796, 1310, 1382
TspRI CASTG 2 cut(s) 376, 913
Tth111I GACNNNGTC 1 cut(s) 1369
Van91I CCANNNNNTGG 2 cut(s) 941, 1118
Vha464I CTTAAG 1 cut(s) 340
VspI ATTAAT 1 cut(s) 483
XapI RAATTY 5 cut(s) 44, 140, 811, 986, 1404
XbaI TCTAGA 1 cut(s) 244
XceI RCATGY 1 cut(s) 785
XcmI CCANNNNNNNNNTGG 1 cut(s) 207
XhoI CTCGAG 1 cut(s) 1361
XmiI GTMKAC 1 cut(s) 544
XspI CTAG 3 cut(s) 245, 260, 1067
ZrmI AGTACT 1 cut(s) 919
Zsp2I ATGCAT 2 cut(s) 6, 903
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.