Rmu_sc0001304.1_g000027

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001304.1
Physical Location & Seq
Reverse (-)
83188 .. 86670
3483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001304.1_g000027.1.cds

Sequence Viewer

Length: 3483 bp
atggctctggcagtagtgggtggagcttttctctcttcgtttctcaatgttttgttcgatcggatggcttcccgtcagttcgtcgatttcttccgccggaaaaagcccactaaaagtactaaactgttggaggagttgacttcaaaattgcagtcggtcaattcagtgctcgatgatgctgaggagaagcaaatcagaaaccctgcagtgaagaagtggcttgacgagcttaaagatgctatctatgctacggggaatgtgctggatgaagtcaacaccgaaactctgcggctcaaagtagaaggtaaagcggaaaagaacgacaacatctggggggactatgtcaattccaattcagtcgatgaatttgacaaaaatcttgaacccaagataaaagacattctccataggttagaacttcttgcatgcaagaaacaagtacttgatttgaaagaaggtgttgtagtaagaccacaagtaagattacctgctacatctctggtagaaaagcaccgagtgtacggtagggatggtgacaaagaggacattataaagcttctgctatcacaggatgagagtggcaataaggtgggtgtgattcctattgtgggcatgggtgggatcgggaagaccacccttgctcagcttgtctacaatgatgatagagtaaagaagattgctcgtgatgatacagtacagaccgccccggcttccaactttgatgatacagtacagaagattgtccgtgatgatacagtacagaccgccccggcttccaactttgacatccaagcatgggtttgtgtttcagaagaatttgacgtggttagaataacccaaacaattcatgggtcagtcatcactggtcagacttgtgttgttacagatttgaatctacttcaagttcaattgaaggatgctttggcggggaagaagtttctcattgttcttgatgatgtttggaacgagaattatgctctgtgggatgtcttgagggggccgtttcagtctggagcacaaggaagtaagatcattatcacaacacgcaatcaaggtgttgcatctatgatgggtactcgttcatctcaccaactaagcatattatctgagcatgattgctggaaactgtttgctaaacatgcctttgaaaatgcaaacgttggtgaacatccacatcttgaagtaataggaagagagattgtgaggaagtgtaaaggtcttcccttggctgcaaaatcacttggaggtcttttgcgctctgacctgaatccgaaacaatggcagatgatattgaacagtgacatatgggagttatcagcaaaggagagcaacattctgcctgctctatggttgagctatcaatatctatcttcagatctcaagcggtgttttgcctattgttcgatattccccaaaggttatgaatttactaaatcggaattagtatcgttgtggatggctgaagatctcttgcaacctgtaaggaagaaaaagatggaagaagttggagaaggttactttgacactttgatatccaggtcattttttcaactttcaagtgctcgtaatcaatcaatcttcaccatgcatgacctcatcaatgatttagccaaatttgttttgggagaattttgtgttaggttggaggattatgactccctcgagtttccaaacaaaattcgtcatttgtcatatctgaaaactggtgttcatgaatttgaatttcttgggtgtttacttggtactaagaacctgcataccttactggcattaccactacagcttccgtctcatggaaagccttatatgacgagcaagttacatcattttgcattgaaaaagctaaaatacttgagagtgctcatcttatcgaattgtgatgttgggcagtttcttcgttcaatcaacttactgaaacacctaaggtacttggacttgtctcgcactccaatcaaagaactacccgacacagtgtgcaagctttataatttgcagacattgttgttgttggattgcaaagatctcactcagttaccaccaaaactgggaagtctaatcaacttacgtcgtcttgatatcagaggttcaaacataaagaagatgcccaatggtatgggtaaattgaaagatctccaactacaaagtgactttgtcctggtggtagacaattctggaaaaaacattgaaaagttaaaggagcctcatttgggaaaatcactttgtatctcgaaactcactcaagctgtccttgatgggaatgctttggaggacaatatgatcagtgacaaggagtttcttactcagctagctttgacatgggaaggtaatactggtgattcagggaaagatgaagaagtgctcaagaagctcaaacctcattcaaatctgaaggagctcacgattgaatcttatgggcatacaagttttccagattggttaggaagtgtttctttctgtaatctaacttctattacactagcagattgcaaatcttgtctccacttgccatcatttgggcagcttcactccctcatacatctctgccttacggggttagatgcagtggagtcgattggtcctgagttttttggttctgtacctaagccatttatatccttgaaagttctgagtttcataaatatgatggggtggaaagagtggtcttatactggtggtagcaaagaaagtggaacctttcctggtcttcgtaatcttcatctgattcactgtccgaagctgactgggatgttaccgttagatagcataccaaaccttgaaagcctcgagctgcaaaagctggatctctttattgcattatcacaaaattctgaatgcctagaattggtgtccctctgtaccttgaagatacatgaatgcccaaattttcagtgctttcccaatgaagggatgcatgcacccagattaacagagatgtgtatccgtgcatgtaagaaactaaagtcattgccagatgaaatgcacacctctcttccttctcttcagaatatgatcctagaagattgtccagagctagaatcatttcctaatgggggtttgccgtcaaagttaaaaacacttgagtttgattgtagtgaaaagctcttggcaaaccagaagcaatggggtctaccgagactcaacatcctcagaagcttaaaactcagcttcaacggatatgaagggacttcatttccactggaggtgggactgttgccaacccagctctcttctctctgtttcatcaatcttccaaatgtcatgacgatcaaaagcaaggagtttcaaaacctctactctcttgaaaagctgttcattgggaaatgccccagtttgttccacttacctgaagatgggctacccacttctctttctcatctgggaatcgaggattgtgaattgctaactgaattgatgacgcggaagaattgccccaagattgctcacattcctcttgtaacatttgatggaagagagctccaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1160

Amino Acids

130.46

Weight (kDa)

6.68

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 551, 1986
Acc36I ACCTGC 2 cut(s) 496, 1761
AccB7I CCANNNNNTGG 1 cut(s) 2513
AccI GTMKAC 3 cut(s) 651, 2163, 3127
AccII CGCG 1 cut(s) 3418
AciI CCGC 8 cut(s) 94, 289, 311, 702, 765, 926, 1384, 3418
AclI AACGTT 1 cut(s) 1158
AclWI GGATC 3 cut(s) 629, 2808, 3004
AcuI CTGAAG 5 cut(s) 1356, 1482, 2408, 2984, 3366
AdeI CACNNNGTG 2 cut(s) 517, 1974
AjiI CACGTC 1 cut(s) 823
AjnI CCWGG 3 cut(s) 1535, 2154, 2698
AjuI GAANNNNNNNTTGG 2 cut(s) 905, 937
Alw21I GWGCWC 7 cut(s) 171, 1018, 1564, 1863, 2361, 2397, 3477
Alw26I GTCTC 4 cut(s) 1794, 1944, 2501, 3127
AlwI GGATC 3 cut(s) 629, 2808, 3004
Ama87I CYCGRG 2 cut(s) 1661, 2783
AoxI GGCC 1 cut(s) 998
ApeKI GCWGC 3 cut(s) 1229, 2518, 2788
ArsI GACNNNNNNTTYG 2 cut(s) 137, 169
Asp700I GAANNNNTTC 2 cut(s) 2446, 3039
AspLEI GCGC 1 cut(s) 1257
AspS9I GGNCC 2 cut(s) 998, 2576
AsuC2I CCSGG 2 cut(s) 707, 770
AsuHPI GGTGA 5 cut(s) 545, 1079, 1175, 1573, 2345
AsuNHI GCTAGC 1 cut(s) 2305
AvaI CYCGRG 2 cut(s) 1661, 2783
AvaII GGWCC 1 cut(s) 2576
AxyI CCTNAGG 1 cut(s) 1922
BanII GRGCYC 2 cut(s) 2397, 3477
BarI GAAGNNNNNNTAC 4 cut(s) 2449, 2481, 3339, 3371
BauI CACGAG 1 cut(s) 681
BbsI GAAGAC 3 cut(s) 635, 1211, 2696
Bbv12I GWGCWC 7 cut(s) 171, 1018, 1564, 1863, 2361, 2397, 3477
BbvCI CCTCAGC 1 cut(s) 180
BbvI GCAGC 3 cut(s) 1216, 2530, 2775
BceAI ACGGC 2 cut(s) 985, 3043
BcgI CGANNNNNNTGC 6 cut(s) 956, 990, 1877, 1911, 2550, 2584
BciT130I CCWGG 3 cut(s) 1537, 2156, 2700
BciVI GTATCC 1 cut(s) 2948
BclI TGATCA 1 cut(s) 2277
BcnI CCSGG 2 cut(s) 707, 770
BcoDI GTCTC 4 cut(s) 1794, 1944, 2501, 3127
BfaI CTAG 5 cut(s) 2306, 2477, 2837, 3014, 3032
BfmI CTRYAG 2 cut(s) 204, 1778
BfuAI ACCTGC 2 cut(s) 496, 1761
BfuI GTATCC 1 cut(s) 2948
BglII AGATCT 4 cut(s) 1375, 1465, 2020, 2128
BisI GCNGC 4 cut(s) 290, 1230, 2519, 2789
BlpI GCTNAGC 1 cut(s) 642
BlsI GCNGC 4 cut(s) 291, 1231, 2520, 2790
BmcAI AGTACT 2 cut(s) 118, 441
Bme1390I CCNGG 5 cut(s) 707, 770, 1537, 2156, 2700
Bme18I GGWCC 1 cut(s) 2576
BmeT110I CYCGRG 2 cut(s) 1661, 2783
BmgBI CACGTC 1 cut(s) 823
BmgT120I GGNCC 2 cut(s) 998, 2576
BmiI GGNNCC 3 cut(s) 999, 2199, 2692
BmrFI CCNGG 5 cut(s) 707, 770, 1537, 2156, 2700
BmrI ACTGGG 3 cut(s) 2054, 2751, 3321
BmsI GCATC 7 cut(s) 166, 226, 907, 1070, 2091, 2548, 2898
BmtI GCTAGC 1 cut(s) 2309
BmuI ACTGGG 3 cut(s) 2054, 2751, 3321
BpiI GAAGAC 3 cut(s) 635, 1211, 2696
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 2 cut(s) 1032, 3218
Bpu10I CCTNAGC 2 cut(s) 180, 2601
Bpu1102I GCTNAGC 1 cut(s) 642
BpuEI CTTGAG 6 cut(s) 1012, 1364, 1873, 2223, 2345, 3098
BpuMI CCSGG 2 cut(s) 707, 770
BsaBI GATNNNNATC 3 cut(s) 891, 1034, 2936
BsaJI CCNNGG 3 cut(s) 705, 768, 1224
Bse1I ACTGG 9 cut(s) 868, 1708, 1770, 2049, 2335, 2674, 2746, 3201, 3327
Bse21I CCTNAGG 1 cut(s) 1922
Bse3DI GCAATG 2 cut(s) 2963, 3125
Bse8I GATNNNNATC 3 cut(s) 891, 1034, 2936
BseBI CCWGG 3 cut(s) 1537, 2156, 2700
BseDI CCNNGG 3 cut(s) 705, 768, 1224
BseJI GATNNNNATC 3 cut(s) 891, 1034, 2936
BseMI GCAATG 2 cut(s) 2963, 3125
BseMII CTCAG 9 cut(s) 171, 656, 1098, 2042, 2315, 2571, 2618, 3160, 3175
BseNI ACTGG 9 cut(s) 868, 1708, 1770, 2049, 2335, 2674, 2746, 3201, 3327
BseRI GAGGAG 2 cut(s) 146, 197
BseXI GCAGC 3 cut(s) 1216, 2530, 2775
BseYI CCCAGC 1 cut(s) 3219
Bsh1236I CGCG 1 cut(s) 3418
Bsh1285I CGRYCG 1 cut(s) 61
BshFI GGCC 1 cut(s) 1000
BsiEI CGRYCG 1 cut(s) 61
BsiHKAI GWGCWC 7 cut(s) 171, 1018, 1564, 1863, 2361, 2397, 3477
BsiHKCI CYCGRG 2 cut(s) 1661, 2783
BsiSI CCGG 3 cut(s) 97, 707, 770
BslFI GGGAC 4 cut(s) 350, 2833, 3196, 3219
BsmAI GTCTC 4 cut(s) 1794, 1944, 2501, 3127
BsmBI CGTCTC 1 cut(s) 1794
BsmFI GGGAC 4 cut(s) 350, 2833, 3196, 3219
BsmI GAATGC 3 cut(s) 2263, 2837, 2879
BsnI GGCC 1 cut(s) 1000
BsoBI CYCGRG 2 cut(s) 1661, 2783
Bsp1286I GDGCHC 7 cut(s) 171, 1018, 1564, 1863, 2361, 2397, 3477
Bsp1720I GCTNAGC 1 cut(s) 642
BspACI CCGC 8 cut(s) 94, 289, 311, 702, 765, 926, 1384, 3418
BspANI GGCC 1 cut(s) 1000
BspCNI CTCAG 9 cut(s) 172, 655, 1099, 2041, 2314, 2572, 2619, 3159, 3174
BspFNI CGCG 1 cut(s) 3418
BspHI TCATGA 2 cut(s) 1711, 3258
BspLI GGNNCC 3 cut(s) 999, 2199, 2692
BspMAI CTGCAG 1 cut(s) 208
BspMI ACCTGC 2 cut(s) 496, 1761
BspOI GCTAGC 1 cut(s) 2309
BspPI GGATC 3 cut(s) 629, 2808, 3004
BsrDI GCAATG 2 cut(s) 2963, 3125
BsrI ACTGG 9 cut(s) 868, 1708, 1770, 2049, 2335, 2674, 2746, 3201, 3327
BssECI CCNNGG 3 cut(s) 705, 768, 1224
BssSI CACGAG 1 cut(s) 681
BssT1I CCWWGG 1 cut(s) 1224
Bst2BI CACGAG 1 cut(s) 681
Bst2UI CCWGG 3 cut(s) 1537, 2156, 2700
Bst6I CTCTTC 6 cut(s) 40, 1186, 2994, 3003, 3232, 3463
BstC8I GCNNGC 5 cut(s) 427, 1341, 1979, 2307, 2913
BstFNI CGCG 1 cut(s) 3418
BstHHI GCGC 1 cut(s) 1257
BstMAI GTCTC 4 cut(s) 1794, 1944, 2501, 3127
BstMCI CGRYCG 1 cut(s) 61
BstMWI GCNNNNNNNGC 6 cut(s) 226, 245, 1139, 2365, 2794, 3220
BstNI CCWGG 3 cut(s) 1537, 2156, 2700
BstNSI RCATGY 4 cut(s) 429, 1142, 2915, 2949
BstSCI CCNGG 5 cut(s) 705, 768, 1535, 2154, 2698
BstSFI CTRYAG 2 cut(s) 204, 1778
BstUI CGCG 1 cut(s) 3418
BstV1I GCAGC 3 cut(s) 1216, 2530, 2775
BstV2I GAAGAC 3 cut(s) 635, 1211, 2696
BstX2I RGATCY 5 cut(s) 1375, 1465, 2020, 2128, 2800
BstXI CCANNNNNNTGG 1 cut(s) 2113
BstYI RGATCY 5 cut(s) 1375, 1465, 2020, 2128, 2800
Bsu36I CCTNAGG 1 cut(s) 1922
BsuI GTATCC 1 cut(s) 2948
BsuRI GGCC 1 cut(s) 1000
BtrI CACGTC 1 cut(s) 823
BtsI GCAGTG 2 cut(s) 213, 2568
BveI ACCTGC 2 cut(s) 496, 1761
Cac8I GCNNGC 5 cut(s) 427, 1341, 1979, 2307, 2913
CciI TCATGA 2 cut(s) 1711, 3258
CfoI GCGC 1 cut(s) 1257
Cfr13I GGNCC 2 cut(s) 998, 2576
CseI GACGC 1 cut(s) 3424
CspCI CAANNNNNGTGG 2 cut(s) 2668, 2703
DraIII CACNNNGTG 2 cut(s) 517, 1974
Eam1104I CTCTTC 6 cut(s) 40, 1186, 2994, 3003, 3232, 3463
EarI CTCTTC 6 cut(s) 40, 1186, 2994, 3003, 3232, 3463
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 2 cut(s) 2395, 3475
Eco130I CCWWGG 1 cut(s) 1224
Eco24I GRGCYC 2 cut(s) 2397, 3477
Eco32I GATATC 2 cut(s) 1533, 2077
Eco47I GGWCC 1 cut(s) 2576
Eco53kI GAGCTC 2 cut(s) 2395, 3475
Eco57I CTGAAG 5 cut(s) 1356, 1482, 2408, 2984, 3366
Eco81I CCTNAGG 1 cut(s) 1922
Eco88I CYCGRG 2 cut(s) 1661, 2783
EcoICRI GAGCTC 2 cut(s) 2395, 3475
EcoRII CCWGG 3 cut(s) 1535, 2154, 2698
EcoRV GATATC 2 cut(s) 1533, 2077
EcoT14I CCWWGG 1 cut(s) 1224
EcoT22I ATGCAT 2 cut(s) 1590, 2913
EcoT38I GRGCYC 2 cut(s) 2397, 3477
ErhI CCWWGG 1 cut(s) 1224
Esp3I CGTCTC 1 cut(s) 1794
FalI AAGNNNNNCTT 4 cut(s) 2232, 2264, 2434, 2466
FaqI GGGAC 4 cut(s) 350, 2833, 3196, 3219
FauI CCCGC 1 cut(s) 919
FauNDI CATATG 1 cut(s) 1304
FbaI TGATCA 1 cut(s) 2277
FblI GTMKAC 3 cut(s) 651, 2163, 3127
Fnu4HI GCNGC 4 cut(s) 290, 1230, 2519, 2789
FriOI GRGCYC 2 cut(s) 2397, 3477
Fsp4HI GCNGC 4 cut(s) 290, 1230, 2519, 2789
FspBI CTAG 5 cut(s) 2306, 2477, 2837, 3014, 3032
GlaI GCGC 1 cut(s) 1256
GluI GCNGC 4 cut(s) 290, 1230, 2519, 2789
GsaI CCCAGC 1 cut(s) 3223
GsuI CTGGAG 2 cut(s) 1032, 3218
HaeIII GGCC 1 cut(s) 1000
HapII CCGG 3 cut(s) 97, 707, 770
HgaI GACGC 1 cut(s) 3424
HhaI GCGC 1 cut(s) 1257
Hin6I GCGC 1 cut(s) 1255
HinP1I GCGC 1 cut(s) 1255
HincII GTYRAC 2 cut(s) 138, 274
HindII GTYRAC 2 cut(s) 138, 274
HindIII AAGCTT 3 cut(s) 554, 1979, 3151
HpaII CCGG 3 cut(s) 97, 707, 770
HphI GGTGA 5 cut(s) 545, 1079, 1175, 1573, 2345
Hpy166II GTNNAC 8 cut(s) 138, 274, 520, 652, 1166, 1736, 2164, 3128
Hpy8I GTNNAC 8 cut(s) 138, 274, 520, 652, 1166, 1736, 2164, 3128
Hpy99I CGWCG 2 cut(s) 86, 2070
HpyAV CCTTC 9 cut(s) 296, 449, 907, 1505, 2315, 2383, 2897, 3003, 3173
HpyCH4IV ACGT 3 cut(s) 822, 1158, 2065
HpyF10VI GCNNNNNNNGC 6 cut(s) 226, 245, 1139, 2365, 2794, 3220
HpySE526I ACGT 3 cut(s) 822, 1158, 2065
HspAI GCGC 1 cut(s) 1255
Ksp22I TGATCA 1 cut(s) 2277
LmnI GCTCC 5 cut(s) 23, 1013, 2197, 2392, 3480
Lsp1109I GCAGC 3 cut(s) 1216, 2530, 2775
LweI GCATC 7 cut(s) 166, 226, 907, 1070, 2091, 2548, 2898
MaeI CTAG 5 cut(s) 2306, 2477, 2837, 3014, 3032
MaeII ACGT 3 cut(s) 822, 1158, 2065
MfeI CAATTG 1 cut(s) 908
MflI RGATCY 5 cut(s) 1375, 1465, 2020, 2128, 2800
MhlI GDGCHC 7 cut(s) 171, 1018, 1564, 1863, 2361, 2397, 3477
MlyI GAGTC 3 cut(s) 1649, 2576, 3129
MmeI TCCRAC 7 cut(s) 108, 738, 801, 1486, 1623, 1989, 2158
Mph1103I ATGCAT 2 cut(s) 1590, 2913
MroXI GAANNNNTTC 2 cut(s) 2446, 3039
MseI TTAA 5 cut(s) 231, 2192, 2924, 3068, 3155
MslI CAYNNNNRTG 1 cut(s) 2639
MspI CCGG 3 cut(s) 97, 707, 770
MspR9I CCNGG 5 cut(s) 707, 770, 1537, 2156, 2700
MunI CAATTG 1 cut(s) 908
Mva1269I GAATGC 3 cut(s) 2263, 2837, 2879
MvaI CCWGG 3 cut(s) 1537, 2156, 2700
MvnI CGCG 1 cut(s) 3418
MwoI GCNNNNNNNGC 6 cut(s) 226, 245, 1139, 2365, 2794, 3220
NciI CCSGG 2 cut(s) 707, 770
NdeI CATATG 1 cut(s) 1304
NheI GCTAGC 1 cut(s) 2305
NlaIV GGNNCC 3 cut(s) 999, 2199, 2692
NmuCI GTSAC 4 cut(s) 533, 1298, 2144, 2282
NsiI ATGCAT 2 cut(s) 1590, 2913
NspI RCATGY 4 cut(s) 429, 1142, 2915, 2949
PaeI GCATGC 2 cut(s) 429, 2915
PaeR7I CTCGAG 2 cut(s) 1661, 2783
PagI TCATGA 2 cut(s) 1711, 3258
PctI GAATGC 3 cut(s) 2263, 2837, 2879
PdmI GAANNNNTTC 2 cut(s) 2446, 3039
PfeI GAWTC 8 cut(s) 598, 892, 1267, 2336, 2405, 2722, 3035, 3381
PflFI GACNNNGTC 2 cut(s) 341, 2150
PflMI CCANNNNNTGG 1 cut(s) 2513
PkrI GCNGC 4 cut(s) 291, 1231, 2520, 2790
Ple19I CGATCG 1 cut(s) 61
PleI GAGTC 3 cut(s) 1649, 2575, 3129
PpsI GAGTC 3 cut(s) 1649, 2575, 3129
PsiI TTATAA 2 cut(s) 551, 1986
Psp124BI GAGCTC 2 cut(s) 2397, 3477
Psp1406I AACGTT 1 cut(s) 1158
Psp6I CCWGG 3 cut(s) 1535, 2154, 2698
PspFI CCCAGC 1 cut(s) 3219
PspGI CCWGG 3 cut(s) 1535, 2154, 2698
PspN4I GGNNCC 3 cut(s) 999, 2199, 2692
PspPI GGNCC 2 cut(s) 998, 2576
PspXI VCTCGAGB 2 cut(s) 1661, 2783
PstI CTGCAG 1 cut(s) 208
PsuI RGATCY 5 cut(s) 1375, 1465, 2020, 2128, 2800
PsyI GACNNNGTC 2 cut(s) 341, 2150
PvuI CGATCG 1 cut(s) 61
RseI CAYNNNNRTG 1 cut(s) 2639
SacI GAGCTC 2 cut(s) 2397, 3477
SaqAI TTAA 5 cut(s) 231, 2192, 2924, 3068, 3155
SatI GCNGC 4 cut(s) 290, 1230, 2519, 2789
Sau96I GGNCC 2 cut(s) 998, 2576
ScaI AGTACT 2 cut(s) 118, 441
SchI GAGTC 3 cut(s) 1649, 2576, 3129
ScrFI CCNGG 5 cut(s) 707, 770, 1537, 2156, 2700
SduI GDGCHC 7 cut(s) 171, 1018, 1564, 1863, 2361, 2397, 3477
SfaNI GCATC 7 cut(s) 166, 226, 907, 1070, 2091, 2548, 2898
SfcI CTRYAG 2 cut(s) 204, 1778
Sfr274I CTCGAG 2 cut(s) 1661, 2783
SinI GGWCC 1 cut(s) 2576
SlaI CTCGAG 2 cut(s) 1661, 2783
SmiMI CAYNNNNRTG 1 cut(s) 2639
SmlI CTYRAG 8 cut(s) 991, 1379, 1661, 1852, 2238, 2360, 2783, 3077
SmoI CTYRAG 8 cut(s) 991, 1379, 1661, 1852, 2238, 2360, 2783, 3077
SphI GCATGC 2 cut(s) 429, 2915
SsiI CCGC 8 cut(s) 94, 289, 311, 702, 765, 926, 1384, 3418
SspMI CTAG 5 cut(s) 2306, 2477, 2837, 3014, 3032
SstI GAGCTC 2 cut(s) 2397, 3477
StyD4I CCNGG 5 cut(s) 705, 768, 1535, 2154, 2698
StyI CCWWGG 1 cut(s) 1224
TaiI ACGT 3 cut(s) 825, 1161, 2068
TaqII GACCGA 1 cut(s) 145
TatI WGTACW 5 cut(s) 116, 439, 694, 730, 757
TauI GCSGC 1 cut(s) 292
TfiI GAWTC 8 cut(s) 598, 892, 1267, 2336, 2405, 2722, 3035, 3381
Tru1I TTAA 5 cut(s) 231, 2192, 2924, 3068, 3155
Tru9I TTAA 5 cut(s) 231, 2192, 2924, 3068, 3155
TseFI GTSAC 4 cut(s) 533, 1298, 2144, 2282
TseI GCWGC 3 cut(s) 1229, 2518, 2788
Tsp45I GTSAC 4 cut(s) 533, 1298, 2144, 2282
TspGWI ACGGA 4 cut(s) 734, 1776, 2930, 3186
Tth111I GACNNNGTC 2 cut(s) 341, 2150
Van91I CCANNNNNTGG 1 cut(s) 2513
VpaK11BI GGWCC 1 cut(s) 2576
XceI RCATGY 4 cut(s) 429, 1142, 2915, 2949
XcmI CCANNNNNNNNNTGG 2 cut(s) 845, 1618
XhoI CTCGAG 2 cut(s) 1661, 2783
XmiI GTMKAC 3 cut(s) 651, 2163, 3127
XmnI GAANNNNTTC 2 cut(s) 2446, 3039
XspI CTAG 5 cut(s) 2306, 2477, 2837, 3014, 3032
ZrmI AGTACT 2 cut(s) 118, 441
Zsp2I ATGCAT 2 cut(s) 1590, 2913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.