disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 20 - 72 | 2.6e-12 | Rx N-terminal domain |
| NB-ARC | PF00931 | 108 - 278 | 6.4e-33 | NB-ARC domain |
| WHD_DRP | PF23559 | 361 - 429 | 1.1e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 506 - 828 | 4.9e-27 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 622 - 747 | 4.8e-37 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3626 |
| Acc16I | TGCGCA | 3 cut(s) | 752, 1433, 2737 |
| Acc36I | ACCTGC | 1 cut(s) | 118 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2198 |
| AccI | GTMKAC | 2 cut(s) | 1801, 2767 |
| AccIII | TCCGGA | 1 cut(s) | 850 |
| AciI | CCGC | 5 cut(s) | 405, 2203, 2493, 2693, 2903 |
| AclI | AACGTT | 2 cut(s) | 344, 2860 |
| AclWI | GGATC | 2 cut(s) | 171, 2010 |
| AcoI | YGGCCR | 2 cut(s) | 2690, 2838 |
| AcsI | RAATTY | 7 cut(s) | 1100, 1304, 1382, 1741, 2816, 3459, 3482 |
| AcuI | CTGAAG | 7 cut(s) | 207, 516, 2257, 2683, 3003, 3243, 3272 |
| AcvI | CACGTG | 1 cut(s) | 1337 |
| AfaI | GTAC | 5 cut(s) | 672, 1660, 2043, 2176, 3269 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 240, 394, 395, 430, 2198, 2369, 2375, 3056 |
| AflIII | ACRYGT | 1 cut(s) | 2038 |
| AjnI | CCWGG | 4 cut(s) | 45, 234, 2368, 2602 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 767, 799 |
| AleI | CACNNNNGTG | 2 cut(s) | 886, 3468 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2095, 2127, 3342, 3374 |
| Alw21I | GWGCWC | 5 cut(s) | 78, 138, 847, 2226, 3456 |
| Alw26I | GTCTC | 9 cut(s) | 932, 2029, 2121, 2165, 2544, 2618, 3046, 3295, 3482 |
| Alw44I | GTGCAC | 1 cut(s) | 843 |
| AlwI | GGATC | 2 cut(s) | 171, 2010 |
| Aor13HI | TCCGGA | 1 cut(s) | 850 |
| AoxI | GGCC | 3 cut(s) | 1953, 2690, 2838 |
| ApaLI | GTGCAC | 1 cut(s) | 843 |
| ApeKI | GCWGC | 4 cut(s) | 908, 1394, 3080, 3355 |
| ApoI | RAATTY | 7 cut(s) | 1100, 1304, 1382, 1741, 2816, 3459, 3482 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 132, 164, 1085, 1117, 1391, 1423, 3170, 3202 |
| AseI | ATTAAT | 1 cut(s) | 1238 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 614, 663, 2476 |
| AspLEI | GCGC | 4 cut(s) | 198, 753, 1434, 2738 |
| AspS9I | GGNCC | 3 cut(s) | 433, 1953, 2895 |
| AsuHPI | GGTGA | 1 cut(s) | 61 |
| AsuII | TTCGAA | 1 cut(s) | 3298 |
| AvaII | GGWCC | 2 cut(s) | 433, 2895 |
| BaeGI | GKGCMC | 1 cut(s) | 847 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 287, 320, 2522, 2555 |
| BalI | TGGCCA | 1 cut(s) | 2840 |
| BanII | GRGCYC | 3 cut(s) | 138, 2226, 3456 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2272, 2304 |
| BbrPI | CACGTG | 1 cut(s) | 1337 |
| BbsI | GAAGAC | 6 cut(s) | 554, 890, 2702, 3437, 3494, 3575 |
| Bbv12I | GWGCWC | 5 cut(s) | 78, 138, 847, 2226, 3456 |
| BbvCI | CCTCAGC | 1 cut(s) | 2435 |
| BbvI | GCAGC | 4 cut(s) | 895, 1381, 3067, 3342 |
| BccI | CCATC | 8 cut(s) | 50, 311, 1024, 1126, 2033, 2093, 2520, 2830 |
| BceAI | ACGGC | 1 cut(s) | 2287 |
| BciT130I | CCWGG | 4 cut(s) | 47, 236, 2370, 2604 |
| BciVI | GTATCC | 3 cut(s) | 288, 1187, 2523 |
| BcoDI | GTCTC | 9 cut(s) | 932, 2029, 2121, 2165, 2544, 2618, 3046, 3295, 3482 |
| BfaI | CTAG | 9 cut(s) | 746, 840, 1502, 2106, 2387, 2957, 3023, 3077, 3218 |
| BfmI | CTRYAG | 1 cut(s) | 1719 |
| BfuAI | ACCTGC | 1 cut(s) | 118 |
| BfuI | GTATCC | 3 cut(s) | 288, 1187, 2523 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1952 |
| BisI | GCNGC | 5 cut(s) | 909, 1395, 2693, 3081, 3356 |
| BlsI | GCNGC | 5 cut(s) | 910, 1396, 2694, 3082, 3357 |
| BmcAI | AGTACT | 2 cut(s) | 2176, 3269 |
| Bme1390I | CCNGG | 4 cut(s) | 47, 236, 2370, 2604 |
| Bme18I | GGWCC | 2 cut(s) | 433, 2895 |
| BmgT120I | GGNCC | 3 cut(s) | 433, 1953, 2895 |
| BmiI | GGNNCC | 2 cut(s) | 70, 1954 |
| BmrFI | CCNGG | 4 cut(s) | 47, 236, 2370, 2604 |
| BmrI | ACTGGG | 3 cut(s) | 1860, 1883, 3280 |
| BmuI | ACTGGG | 3 cut(s) | 1860, 1883, 3280 |
| BpiI | GAAGAC | 6 cut(s) | 554, 890, 2702, 3437, 3494, 3575 |
| BpmI | CTGGAG | 3 cut(s) | 1320, 2642, 3569 |
| Bpu10I | CCTNAGC | 3 cut(s) | 429, 2435, 3524 |
| Bpu14I | TTCGAA | 1 cut(s) | 3298 |
| BpuEI | CTTGAG | 6 cut(s) | 2300, 2423, 2488, 2675, 3329, 3334 |
| Bsa29I | ATCGAT | 1 cut(s) | 180 |
| BsaAI | YACGTR | 1 cut(s) | 1337 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2991 |
| BsaI | GGTCTC | 3 cut(s) | 932, 2544, 3046 |
| BsaJI | CCNNGG | 5 cut(s) | 201, 234, 1947, 2534, 3052 |
| BsaWI | WCCGGW | 1 cut(s) | 850 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 2615, 2645, 3342, 3372, 3542, 3572 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 240, 394, 395, 430, 2198, 2369, 2375, 3056 |
| Bse118I | RCCGGY | 1 cut(s) | 1786 |
| Bse1I | ACTGG | 6 cut(s) | 1855, 1878, 2049, 2195, 2625, 3275 |
| Bse3DI | GCAATG | 1 cut(s) | 898 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2991 |
| BseAI | TCCGGA | 1 cut(s) | 850 |
| BseBI | CCWGG | 4 cut(s) | 47, 236, 2370, 2604 |
| BseCI | ATCGAT | 1 cut(s) | 180 |
| BseDI | CCNNGG | 5 cut(s) | 201, 234, 1947, 2534, 3052 |
| BseJI | GATNNNNATC | 1 cut(s) | 2991 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 240, 394, 395, 430, 2198, 2369, 2375, 3056 |
| BseMI | GCAATG | 1 cut(s) | 898 |
| BseMII | CTCAG | 6 cut(s) | 443, 1149, 1993, 2426, 2882, 3515 |
| BseNI | ACTGG | 6 cut(s) | 1855, 1878, 2049, 2195, 2625, 3275 |
| BseRI | GAGGAG | 4 cut(s) | 104, 1392, 2122, 2991 |
| BseSI | GKGCMC | 1 cut(s) | 847 |
| BseXI | GCAGC | 4 cut(s) | 895, 1381, 3067, 3342 |
| BseYI | CCCAGC | 1 cut(s) | 2905 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3127 |
| BshFI | GGCC | 3 cut(s) | 1955, 2692, 2840 |
| BshVI | ATCGAT | 1 cut(s) | 180 |
| BsiEI | CGRYCG | 1 cut(s) | 3127 |
| BsiHKAI | GWGCWC | 5 cut(s) | 78, 138, 847, 2226, 3456 |
| BsiSI | CCGG | 3 cut(s) | 851, 1787, 3506 |
| BslFI | GGGAC | 2 cut(s) | 1341, 3438 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 240, 394, 395, 430, 2198, 2369, 2375, 3056 |
| BsmAI | GTCTC | 9 cut(s) | 932, 2029, 2121, 2165, 2544, 2618, 3046, 3295, 3482 |
| BsmBI | CGTCTC | 2 cut(s) | 2165, 2618 |
| BsmFI | GGGAC | 2 cut(s) | 1341, 3438 |
| BsmI | GAATGC | 1 cut(s) | 2687 |
| BsnI | GGCC | 3 cut(s) | 1955, 2692, 2840 |
| Bso31I | GGTCTC | 3 cut(s) | 932, 2544, 3046 |
| Bsp119I | TTCGAA | 1 cut(s) | 3298 |
| Bsp1286I | GDGCHC | 5 cut(s) | 78, 138, 847, 2226, 3456 |
| Bsp13I | TCCGGA | 1 cut(s) | 850 |
| Bsp1407I | TGTACA | 1 cut(s) | 670 |
| Bsp143I | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| BspACI | CCGC | 5 cut(s) | 405, 2203, 2493, 2693, 2903 |
| BspANI | GGCC | 3 cut(s) | 1955, 2692, 2840 |
| BspCNI | CTCAG | 6 cut(s) | 442, 1150, 1992, 2427, 2883, 3516 |
| BspDI | ATCGAT | 1 cut(s) | 180 |
| BspEI | TCCGGA | 1 cut(s) | 850 |
| BspHI | TCATGA | 2 cut(s) | 2250, 2827 |
| BspLI | GGNNCC | 2 cut(s) | 70, 1954 |
| BspMAI | CTGCAG | 1 cut(s) | 1723 |
| BspMI | ACCTGC | 1 cut(s) | 118 |
| BspPI | GGATC | 2 cut(s) | 171, 2010 |
| BspT104I | TTCGAA | 1 cut(s) | 3298 |
| BspTNI | GGTCTC | 3 cut(s) | 932, 2544, 3046 |
| BsrDI | GCAATG | 1 cut(s) | 898 |
| BsrFI | RCCGGY | 1 cut(s) | 1786 |
| BsrGI | TGTACA | 1 cut(s) | 670 |
| BsrI | ACTGG | 6 cut(s) | 1855, 1878, 2049, 2195, 2625, 3275 |
| BssAI | RCCGGY | 1 cut(s) | 1786 |
| BssECI | CCNNGG | 5 cut(s) | 201, 234, 1947, 2534, 3052 |
| BssMI | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| BssT1I | CCWWGG | 2 cut(s) | 201, 1947 |
| Bst2UI | CCWGG | 4 cut(s) | 47, 236, 2370, 2604 |
| Bst4CI | ACNGT | 4 cut(s) | 757, 1654, 2535, 3470 |
| Bst6I | CTCTTC | 4 cut(s) | 1173, 3375, 3548, 3573 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 818, 2682 |
| BstAUI | TGTACA | 1 cut(s) | 670 |
| BstBAI | YACGTR | 1 cut(s) | 1337 |
| BstBI | TTCGAA | 1 cut(s) | 3298 |
| BstC8I | GCNNGC | 4 cut(s) | 364, 575, 883, 1719 |
| BstDEI | CTNAG | 9 cut(s) | 225, 429, 590, 931, 1158, 1979, 2435, 2891, 3524 |
| BstDSI | CCRYGG | 2 cut(s) | 2534, 3052 |
| BstEII | GGTNACC | 1 cut(s) | 2205 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 428, 2367 |
| BstHHI | GCGC | 4 cut(s) | 198, 753, 1434, 2738 |
| BstKTI | GATC | 8 cut(s) | 166, 180, 1220, 1235, 1270, 2005, 2455, 3172 |
| BstMAI | GTCTC | 9 cut(s) | 932, 2029, 2121, 2165, 2544, 2618, 3046, 3295, 3482 |
| BstMBI | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| BstMCI | CGRYCG | 1 cut(s) | 3127 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 133, 757, 818, 914, 1885, 1952, 2641, 2682 |
| BstNI | CCWGG | 4 cut(s) | 47, 236, 2370, 2604 |
| BstNSI | RCATGY | 4 cut(s) | 146, 489, 821, 2042 |
| BstPI | GGTNACC | 1 cut(s) | 2205 |
| BstSCI | CCNGG | 4 cut(s) | 45, 234, 2368, 2602 |
| BstSFI | CTRYAG | 1 cut(s) | 1719 |
| BstSLI | GKGCMC | 1 cut(s) | 847 |
| BstV1I | GCAGC | 4 cut(s) | 895, 1381, 3067, 3342 |
| BstV2I | GAAGAC | 6 cut(s) | 554, 890, 2702, 3437, 3494, 3575 |
| BstX2I | RGATCY | 1 cut(s) | 163 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 317 |
| BstYI | RGATCY | 1 cut(s) | 163 |
| Bsu15I | ATCGAT | 1 cut(s) | 180 |
| BsuI | GTATCC | 3 cut(s) | 288, 1187, 2523 |
| BsuRI | GGCC | 3 cut(s) | 1955, 2692, 2840 |
| BsuTUI | ATCGAT | 1 cut(s) | 180 |
| BtgI | CCRYGG | 2 cut(s) | 2534, 3052 |
| BtgZI | GCGATG | 3 cut(s) | 459, 2625, 3495 |
| BtsI | GCAGTG | 1 cut(s) | 1626 |
| BtsIMutI | CAGTG | 4 cut(s) | 1626, 2163, 2888, 3267 |
| BveI | ACCTGC | 1 cut(s) | 118 |
| Cac8I | GCNNGC | 4 cut(s) | 364, 575, 883, 1719 |
| CciI | TCATGA | 2 cut(s) | 2250, 2827 |
| CfoI | GCGC | 4 cut(s) | 198, 753, 1434, 2738 |
| Cfr10I | RCCGGY | 1 cut(s) | 1786 |
| Cfr13I | GGNCC | 3 cut(s) | 433, 1953, 2895 |
| ClaI | ATCGAT | 1 cut(s) | 180 |
| CseI | GACGC | 1 cut(s) | 2147 |
| Csp6I | GTAC | 5 cut(s) | 671, 1659, 2042, 2175, 3268 |
| CviQI | GTAC | 5 cut(s) | 671, 1659, 2042, 2175, 3268 |
| DdeI | CTNAG | 9 cut(s) | 225, 429, 590, 931, 1158, 1979, 2435, 2891, 3524 |
| DpnI | GATC | 8 cut(s) | 165, 179, 1219, 1234, 1269, 2004, 2454, 3171 |
| DpnII | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| DraI | TTTAAA | 1 cut(s) | 2418 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3626 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3626 |
| EaeI | YGGCCR | 2 cut(s) | 2690, 2838 |
| Eam1104I | CTCTTC | 4 cut(s) | 1173, 3375, 3548, 3573 |
| EarI | CTCTTC | 4 cut(s) | 1173, 3375, 3548, 3573 |
| Ecl136II | GAGCTC | 3 cut(s) | 136, 2224, 3454 |
| Eco130I | CCWWGG | 2 cut(s) | 201, 1947 |
| Eco24I | GRGCYC | 3 cut(s) | 138, 2226, 3456 |
| Eco31I | GGTCTC | 3 cut(s) | 932, 2544, 3046 |
| Eco47I | GGWCC | 2 cut(s) | 433, 2895 |
| Eco53kI | GAGCTC | 3 cut(s) | 136, 2224, 3454 |
| Eco57I | CTGAAG | 7 cut(s) | 207, 516, 2257, 2683, 3003, 3243, 3272 |
| Eco72I | CACGTG | 1 cut(s) | 1337 |
| Eco91I | GGTNACC | 1 cut(s) | 2205 |
| EcoICRI | GAGCTC | 3 cut(s) | 136, 2224, 3454 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 428, 2367 |
| EcoO109I | RGGNCCY | 2 cut(s) | 433, 2895 |
| EcoO65I | GGTNACC | 1 cut(s) | 2205 |
| EcoRI | GAATTC | 2 cut(s) | 2816, 3482 |
| EcoRII | CCWGG | 4 cut(s) | 45, 234, 2368, 2602 |
| EcoT14I | CCWWGG | 2 cut(s) | 201, 1947 |
| EcoT22I | ATGCAT | 3 cut(s) | 823, 1266, 2017 |
| EcoT38I | GRGCYC | 3 cut(s) | 138, 2226, 3456 |
| ErhI | CCWWGG | 2 cut(s) | 201, 1947 |
| Esp3I | CGTCTC | 2 cut(s) | 2165, 2618 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 996, 1028, 3486, 3518 |
| FaqI | GGGAC | 2 cut(s) | 1341, 3438 |
| FauI | CCCGC | 3 cut(s) | 398, 2486, 2910 |
| FauNDI | CATATG | 1 cut(s) | 2017 |
| FblI | GTMKAC | 2 cut(s) | 1801, 2767 |
| Fnu4HI | GCNGC | 5 cut(s) | 909, 1395, 2693, 3081, 3356 |
| FriOI | GRGCYC | 3 cut(s) | 138, 2226, 3456 |
| Fsp4HI | GCNGC | 5 cut(s) | 909, 1395, 2693, 3081, 3356 |
| FspAI | RTGCGCAY | 1 cut(s) | 752 |
| FspBI | CTAG | 9 cut(s) | 746, 840, 1502, 2106, 2387, 2957, 3023, 3077, 3218 |
| FspI | TGCGCA | 3 cut(s) | 752, 1433, 2737 |
| GlaI | GCGC | 4 cut(s) | 197, 752, 1433, 2737 |
| GluI | GCNGC | 5 cut(s) | 909, 1395, 2693, 3081, 3356 |
| GsaI | CCCAGC | 1 cut(s) | 2909 |
| GsuI | CTGGAG | 3 cut(s) | 1320, 2642, 3569 |
| HaeIII | GGCC | 3 cut(s) | 1955, 2692, 2840 |
| HapII | CCGG | 3 cut(s) | 851, 1787, 3506 |
| HgaI | GACGC | 1 cut(s) | 2147 |
| HhaI | GCGC | 4 cut(s) | 198, 753, 1434, 2738 |
| Hin6I | GCGC | 4 cut(s) | 196, 751, 1432, 2736 |
| HinP1I | GCGC | 4 cut(s) | 196, 751, 1432, 2736 |
| HincII | GTYRAC | 3 cut(s) | 1276, 2551, 2731 |
| HindII | GTYRAC | 3 cut(s) | 1276, 2551, 2731 |
| HindIII | AAGCTT | 1 cut(s) | 189 |
| HpaI | GTTAAC | 3 cut(s) | 1276, 2551, 2731 |
| HpaII | CCGG | 3 cut(s) | 851, 1787, 3506 |
| HphI | GGTGA | 1 cut(s) | 61 |
| Hpy188I | TCNGA | 5 cut(s) | 355, 496, 2090, 2430, 3405 |
| Hpy99I | CGWCG | 2 cut(s) | 2617, 3011 |
| HpyAV | CCTTC | 9 cut(s) | 1462, 1901, 1957, 2070, 2864, 2908, 3158, 3267, 3305 |
| HpyCH4III | ACNGT | 4 cut(s) | 757, 1654, 2535, 3470 |
| HpyCH4IV | ACGT | 4 cut(s) | 344, 1197, 1336, 2860 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 133, 757, 818, 914, 1885, 1952, 2641, 2682 |
| HpyF3I | CTNAG | 9 cut(s) | 225, 429, 590, 931, 1158, 1979, 2435, 2891, 3524 |
| HpySE526I | ACGT | 4 cut(s) | 344, 1197, 1336, 2860 |
| HspAI | GCGC | 4 cut(s) | 196, 751, 1432, 2736 |
| Kpn2I | TCCGGA | 1 cut(s) | 850 |
| KspAI | GTTAAC | 3 cut(s) | 1276, 2551, 2731 |
| Kzo9I | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| LmnI | GCTCC | 5 cut(s) | 8, 203, 2285, 2978, 3363 |
| Lsp1109I | GCAGC | 4 cut(s) | 895, 1381, 3067, 3342 |
| MaeI | CTAG | 9 cut(s) | 746, 840, 1502, 2106, 2387, 2957, 3023, 3077, 3218 |
| MaeII | ACGT | 4 cut(s) | 344, 1197, 1336, 2860 |
| MalI | GATC | 8 cut(s) | 165, 179, 1219, 1234, 1269, 2004, 2454, 3171 |
| MboI | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| MfeI | CAATTG | 2 cut(s) | 1880, 2704 |
| MflI | RGATCY | 1 cut(s) | 163 |
| MhlI | GDGCHC | 5 cut(s) | 78, 138, 847, 2226, 3456 |
| MlsI | TGGCCA | 1 cut(s) | 2840 |
| MluNI | TGGCCA | 1 cut(s) | 2840 |
| MlyI | GAGTC | 7 cut(s) | 970, 2123, 2567, 2639, 3006, 3194, 3372 |
| MmeI | TCCRAC | 5 cut(s) | 609, 765, 1299, 2166, 3312 |
| Mox20I | TGGCCA | 1 cut(s) | 2840 |
| Mph1103I | ATGCAT | 3 cut(s) | 823, 1266, 2017 |
| MroI | TCCGGA | 1 cut(s) | 850 |
| MroXI | GAANNNNTTC | 3 cut(s) | 614, 663, 2476 |
| MscI | TGGCCA | 1 cut(s) | 2840 |
| MslI | CAYNNNNRTG | 6 cut(s) | 47, 468, 886, 1525, 2777, 3468 |
| Msp20I | TGGCCA | 1 cut(s) | 2840 |
| MspA1I | CMGCKG | 2 cut(s) | 2905, 3355 |
| MspI | CCGG | 3 cut(s) | 851, 1787, 3506 |
| MspR9I | CCNGG | 4 cut(s) | 47, 236, 2370, 2604 |
| MunI | CAATTG | 2 cut(s) | 1880, 2704 |
| Mva1269I | GAATGC | 1 cut(s) | 2687 |
| MvaI | CCWGG | 4 cut(s) | 47, 236, 2370, 2604 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 133, 757, 818, 914, 1885, 1952, 2641, 2682 |
| NdeI | CATATG | 1 cut(s) | 2017 |
| NdeII | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| NlaIV | GGNNCC | 2 cut(s) | 70, 1954 |
| NmuCI | GTSAC | 2 cut(s) | 962, 1212 |
| NsbI | TGCGCA | 3 cut(s) | 752, 1433, 2737 |
| NsiI | ATGCAT | 3 cut(s) | 823, 1266, 2017 |
| NspI | RCATGY | 4 cut(s) | 146, 489, 821, 2042 |
| NspV | TTCGAA | 1 cut(s) | 3298 |
| OliI | CACNNNNGTG | 2 cut(s) | 886, 3468 |
| PagI | TCATGA | 2 cut(s) | 2250, 2827 |
| PciI | ACATGT | 1 cut(s) | 2038 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 177, 3012 |
| PctI | GAATGC | 1 cut(s) | 2687 |
| PdmI | GAANNNNTTC | 3 cut(s) | 614, 663, 2476 |
| PfeI | GAWTC | 7 cut(s) | 536, 1915, 2021, 2659, 2722, 2885, 2960 |
| PflFI | GACNNNGTC | 2 cut(s) | 2629, 3626 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2198 |
| PkrI | GCNGC | 5 cut(s) | 910, 1396, 2694, 3082, 3357 |
| PleI | GAGTC | 7 cut(s) | 969, 2123, 2566, 2638, 3006, 3193, 3372 |
| PmaCI | CACGTG | 1 cut(s) | 1337 |
| PmlI | CACGTG | 1 cut(s) | 1337 |
| PpsI | GAGTC | 7 cut(s) | 969, 2123, 2566, 2638, 3006, 3193, 3372 |
| Ppu21I | YACGTR | 1 cut(s) | 1337 |
| PpuMI | RGGWCCY | 2 cut(s) | 433, 2895 |
| PscI | ACATGT | 1 cut(s) | 2038 |
| PshBI | ATTAAT | 1 cut(s) | 1238 |
| Psp124BI | GAGCTC | 3 cut(s) | 138, 2226, 3456 |
| Psp1406I | AACGTT | 2 cut(s) | 344, 2860 |
| Psp5II | RGGWCCY | 2 cut(s) | 433, 2895 |
| Psp6I | CCWGG | 4 cut(s) | 45, 234, 2368, 2602 |
| PspCI | CACGTG | 1 cut(s) | 1337 |
| PspEI | GGTNACC | 1 cut(s) | 2205 |
| PspFI | CCCAGC | 1 cut(s) | 2905 |
| PspGI | CCWGG | 4 cut(s) | 45, 234, 2368, 2602 |
| PspN4I | GGNNCC | 2 cut(s) | 70, 1954 |
| PspPI | GGNCC | 3 cut(s) | 433, 1953, 2895 |
| PspPPI | RGGWCCY | 2 cut(s) | 433, 2895 |
| PstI | CTGCAG | 1 cut(s) | 1723 |
| PsuI | RGATCY | 1 cut(s) | 163 |
| PsyI | GACNNNGTC | 2 cut(s) | 2629, 3626 |
| PvuII | CAGCTG | 1 cut(s) | 3355 |
| RsaI | GTAC | 5 cut(s) | 672, 1660, 2043, 2176, 3269 |
| RsaNI | GTAC | 5 cut(s) | 671, 1659, 2042, 2175, 3268 |
| RseI | CAYNNNNRTG | 6 cut(s) | 47, 468, 886, 1525, 2777, 3468 |
| SacI | GAGCTC | 3 cut(s) | 138, 2226, 3456 |
| SatI | GCNGC | 5 cut(s) | 909, 1395, 2693, 3081, 3356 |
| Sau3AI | GATC | 8 cut(s) | 163, 177, 1217, 1232, 1267, 2002, 2452, 3169 |
| Sau96I | GGNCC | 3 cut(s) | 433, 1953, 2895 |
| ScaI | AGTACT | 2 cut(s) | 2176, 3269 |
| SchI | GAGTC | 7 cut(s) | 970, 2123, 2567, 2639, 3006, 3194, 3372 |
| ScrFI | CCNGG | 4 cut(s) | 47, 236, 2370, 2604 |
| SduI | GDGCHC | 5 cut(s) | 78, 138, 847, 2226, 3456 |
| SfcI | CTRYAG | 1 cut(s) | 1719 |
| SfuI | TTCGAA | 1 cut(s) | 3298 |
| SinI | GGWCC | 2 cut(s) | 433, 2895 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 47, 468, 886, 1525, 2777, 3468 |
| SmlI | CTYRAG | 6 cut(s) | 2315, 2402, 2467, 2654, 3313, 3344 |
| SmoI | CTYRAG | 6 cut(s) | 2315, 2402, 2467, 2654, 3313, 3344 |
| SsiI | CCGC | 5 cut(s) | 405, 2203, 2493, 2693, 2903 |
| SspMI | CTAG | 9 cut(s) | 746, 840, 1502, 2106, 2387, 2957, 3023, 3077, 3218 |
| SstI | GAGCTC | 3 cut(s) | 138, 2226, 3456 |
| StyD4I | CCNGG | 4 cut(s) | 45, 234, 2368, 2602 |
| StyI | CCWWGG | 2 cut(s) | 201, 1947 |
| TaaI | ACNGT | 4 cut(s) | 757, 1654, 2535, 3470 |
| TaiI | ACGT | 4 cut(s) | 347, 1200, 1339, 2863 |
| TaqI | TCGA | 8 cut(s) | 171, 180, 1894, 3006, 3151, 3298, 3480, 3531 |
| TaqII | GACCGA | 1 cut(s) | 3141 |
| TatI | WGTACW | 5 cut(s) | 670, 1658, 2041, 2174, 3267 |
| TauI | GCSGC | 1 cut(s) | 2695 |
| TfiI | GAWTC | 7 cut(s) | 536, 1915, 2021, 2659, 2722, 2885, 2960 |
| TscAI | CASTG | 4 cut(s) | 1633, 2170, 2895, 3267 |
| TseFI | GTSAC | 2 cut(s) | 962, 1212 |
| TseI | GCWGC | 4 cut(s) | 908, 1394, 3080, 3355 |
| Tsp45I | GTSAC | 2 cut(s) | 962, 1212 |
| TspGWI | ACGGA | 6 cut(s) | 61, 2053, 2470, 2570, 2642, 3024 |
| TspRI | CASTG | 4 cut(s) | 1633, 2170, 2895, 3267 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2629, 3626 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2198 |
| VneI | GTGCAC | 1 cut(s) | 843 |
| VpaK11BI | GGWCC | 2 cut(s) | 433, 2895 |
| VspI | ATTAAT | 1 cut(s) | 1238 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 428, 2367 |
| XapI | RAATTY | 7 cut(s) | 1100, 1304, 1382, 1741, 2816, 3459, 3482 |
| XbaI | TCTAGA | 3 cut(s) | 1501, 2386, 2956 |
| XceI | RCATGY | 4 cut(s) | 146, 489, 821, 2042 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 397 |
| XmiI | GTMKAC | 2 cut(s) | 1801, 2767 |
| XmnI | GAANNNNTTC | 3 cut(s) | 614, 663, 2476 |
| XspI | CTAG | 9 cut(s) | 746, 840, 1502, 2106, 2387, 2957, 3023, 3077, 3218 |
| ZrmI | AGTACT | 2 cut(s) | 2176, 3269 |
| Zsp2I | ATGCAT | 3 cut(s) | 823, 1266, 2017 |