Rw0G015090

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00684
Physical Location & Seq
Reverse (-)
15070 .. 18485
3416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G015090.1

Sequence Viewer

Length: 3357 bp
ATGGCTCTGGCAGTAGTGGGTGGAGCTTTTCTCTCTTCGTTTCTCAATGTTTTGTTTGATCGGATGGCTTCCCGTCAGTTCGTCGATTTCTTCCGCCGGAAAAAGCCCACCGATAGTACTAAACTGTTTAAGGAGTTGACTTCAAAGTTGCATTTGATCAATTCAGTGCTCGACGATGCTGAGGAGAAGCAAATCAGAAACCCTATGGTGAAGAAGTGGCTTGACGAGCTTAAAGATGTTATCTATGCTGCGGGGGATGTGTTGGACAATTGGGGGGACTTTGTCAATTCCAATTCAATCGATAAATTCGACAAAAGTCTTGAACCCAAGATAGAAGACATTCTCCATAGGTTAGAACTTGTTGCATACAAGAAAGAAGCACTTGATTTGAAAGAATGTGTTGTAGCAAGACCACAAGTAAGATTACCTGCTACATCTCTGGTAGAAAAGCACGAGGTGTACGGTAGGGATGGTGACAAAGAGAGCATTATACAACTTCTGCTATCACAGGATGTGAATGGCAGTAAGGTGGGTGTGATTCCTATTGTGGGCATGGGTGGGATTGGGAAGACCACCCTTGCTCAGCTTGTCTACAATGATGATAGAATAAAGAAGATCACCCGTGATCATAAAGCACAGACCGCCCCCGCTTCCAACTTTGACATCCAAGCTTGGGTTTGTGTTTCAGAAGAATTTAACGTGGTTAAAATAACCCAAACTATTCATGGAGCAGTCATCACTGGTCAGACTTGTGGTGTTACAGATTTGAATCTACTTCAAGTTCAATTGAAGGATGCCTTGGCGGGGAAGAAGTTTCTCATTGTTCTTGATGATGTTTGGAACGAGAATTATGCTCAGTGGGATGTCTTGAGGGGGCCGTTCCAGTCTGGAGCACAAGGAAGTAAGATCATTATCACAACACGCAATCAAGGTGTTGCATCTATGATGGGTACTCGTTCAGCTCACCAACTAAGCATATTATCTGAGCAAGATTGCTGGGAACTGTTTGCTAAACATGCCTTTGAAAATGCAAACGTTGGTCCACCTCCACATCTTGAAGTAATCGGAAGAGAGATTGTGAGGAAGTGTAAAGGTCTTCCCTTGGCTGCAAAATCACTTGGAGGTCTTTTACGCTCTGAACTGAATCCGAAACAATGGGAGATGATATTGAACAGTGACATATGGGAGTTATCAGCAAAGGAGAGCAACATTCTTCCTGCTCTATGGTTGAGCTATCAGTATCTATCTTCAGATCTCAAGCGGTGTTTTGCCTATTGTTCGGTATTCCCCAAAGGTTACGAATTTTCCAAGTCGGAATTAGTATCGTTGTGGATGGCTGAAGATCTCTTACAACCTGAAAGGAGGAAAACAATGGAACAAGTTGGAGATGACTACTTCAACATTCTAATCTCAAGGTCATTTTTTCAACATTCAACTGCTTATAATCAATCAGTTTTCACCATGCATGACCTCATCAATGATTTAGCCAAATTTGTTTTGGGGGAGTTTTGTGTTAGGTTGGAGGATTATGACTCCCTCGAGTTTCCAAACAGAATTCGTCATTTGTCATATCTGAAAACTGGTGTTCATGAATTTGAATATCTTGGGTGTTTACTTGGGACTAAGAATCTGCATACCTTACTGGCATTACCACTACAGCTTCCGTCTCATGGAAAGCCTTATATGACGAGCAAGTTACATCGTTTTGCATTGGGAAAGCTAAAATACTTGAGAGTGCTCATCTTATCGAATTGTGATGTTGGGCTGTTTCTTCATTCAATCAACTTACTGAAACATCTAAGGTACTTGGACTTGTCTCGAACTCCAATTGCAGAGCTACCCGACACAGTGTGCAAGCTGTATAATTTGCAGACATTGTTGTTGTTGGATTGCAAAAATCTCACTCAGTTACCCCCAAAATTGGGAAGTCTAATCAACTTACATCTTCTTGATATCAGGGGTTCAAAGATAGAGAGGATGCCCACTGGTGTGGGTAAATTGAAAGATCTCCAACTACTGAGTGACTTTGTCCTGATGGTAGACGATTCTGGAAAAAACATTGATAAGTTAAAGGAGCCTGATTTGGGAAAATCACTTTGTATCTCGAATCTCACTAAAACTGTCCTTGATGGGAATGCTTTGGAGGACAATATGATCAGTGACAAGGAGTCTCTTACTCAGCTAGCTTTGACATGGGGAGGTAATACTGGTGATTCAGCGAAAGATGAAGAAGTACTCAAGAAGCTCCAACCTCATCCAAATCTGGAGGAGCTCACAATTGAATCTTATGGGCATACAAGTTTTTCAGATTGGTTAGGAAGTAATTCTTTCTTGAATCTAACTTCTATTACACTAGCAGATTGCAAATTTTGTCTCTACTTGCCACCATTTGGGCAGCTTCCCTCCCTCGTACAGCTCTGTCTTACGAGGTTAGATGCAGTGGAGTCTATTGGTGCTGAGTTCTTTGGTTCTCTACCTAAGCCATTTAGATCCCTGAAAGTTCTGAGTTTCATAAATATGTTGGGGTGGAAAGAGTGGTCTTATACTGGAGGTAACAAAGAAAGTGGAACCTTTCCTGATCTTCGTAATCTTCATCTGAATAGCTGTCCGAAGCTGACTGGGATGTTACCGCTAGATAGCATACCAAACCTTGAAAGCCTCGAACTGCAAGATCTGGAACTCTTTACTGGTTCTTGCCTAAAATTGCTGTCCCTCTGTACCTTGAAGATACTTGAATGCCCAAATTTTGAAAGCTTTCCAAAGGAAGGGATGGATGCACCCAGATTAACAGAGATGTGTATCCGTAAATGTATGAAACTAAAGTCATTGCCAAAACAAATGTGCACCTCTCTTCCTTCTCTTTTGAATATGATCCTAGAAGATTGCCCAGAGCTAGAATCATTTCCTACAGGAGGTTTGCCGCCAAAGTTAAAAACACTCGAGTTTGATTGTAACCAAAATCTCTTGGATAAACAGAAGCAATGGGGTCTACCAAGACTCAACTTCCTCAGAAGCTTAAAACTCAGCTTCAAAGGATGTGGCCAAGGGACTTCATTTCCACTGGAGGTGGGAGTGTTGCCAACTCATCTTACTTCTCTCTCTTTCTTCAATCTTCCGAATGTCACAACGATCAAAAGCAAGGAGTTTCAAAACCTCTACTCTCTTGAAAAGCTGTTCATTGGGAAATGCCCCAATTTGATGCACTTACCTGAAGATGGGCTACCCGCTTCAGTTTCTCATCTGGGAATCGAGGATTGTGAATTGCTAACTGTAGGGGACAAGTTGATGACGCGGAAGAATTGCCCCAAGATTGCTCACATTCCTCTTGTAACATTTGATGGAAGAGAGCTCCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1118

Amino Acids

125.6

Weight (kDa)

6.44

Isoelectric Point (pI)

37.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 91 7.7e-16 Rx N-terminal domain
NB-ARC PF00931 159 - 343 1.2e-35 NB-ARC domain
WHD_DRP PF23559 428 - 496 8.7e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 570 - 871 2.7e-24 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 689 - 810 2.4e-28 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1443
Acc36I ACCTGC 1 cut(s) 436
AccB7I CCANNNNNTGG 1 cut(s) 2390
AccI GTMKAC 3 cut(s) 591, 2040, 2989
AccII CGCG 1 cut(s) 3292
AclI AACGTT 1 cut(s) 1035
AclWI GGATC 2 cut(s) 2484, 2866
AcoI YGGCCR 1 cut(s) 3040
AcsI RAATTY 8 cut(s) 305, 692, 1301, 1490, 1554, 1592, 2366, 2743
AcuI CTGAAG 4 cut(s) 1233, 1359, 3213, 3231
AdeI CACNNNGTG 2 cut(s) 457, 1851
AfaI GTAC 7 cut(s) 118, 461, 952, 1805, 2235, 2412, 2719
AhdI GACNNNNNGTC 1 cut(s) 2167
AjuI GAANNNNNNNTTGG 2 cut(s) 782, 814
AleI CACNNNNGTG 1 cut(s) 1988
Alw21I GWGCWC 6 cut(s) 171, 895, 1740, 2274, 2846, 3351
Alw26I GTCTC 4 cut(s) 1671, 1821, 2175, 2378
Alw44I GTGCAC 1 cut(s) 2842
AlwI GGATC 2 cut(s) 2484, 2866
Ama87I CYCGRG 2 cut(s) 1538, 2939
AoxI GGCC 2 cut(s) 875, 3040
ApaLI GTGCAC 1 cut(s) 2842
ApeKI GCWGC 3 cut(s) 248, 1106, 2395
ApoI RAATTY 8 cut(s) 305, 692, 1301, 1490, 1554, 1592, 2366, 2743
Asp700I GAANNNNTTC 4 cut(s) 339, 2323, 2754, 2901
AspS9I GGNCC 2 cut(s) 875, 1040
AsuHPI GGTGA 6 cut(s) 220, 485, 610, 956, 1450, 2222
AsuNHI GCTAGC 1 cut(s) 2182
AvaI CYCGRG 2 cut(s) 1538, 2939
AvaII GGWCC 1 cut(s) 1040
BaeGI GKGCMC 1 cut(s) 2846
BalI TGGCCA 1 cut(s) 3042
BanII GRGCYC 2 cut(s) 2274, 3351
BarI GAAGNNNNNNTAC 4 cut(s) 1332, 1364, 3204, 3236
BauI CACGAG 1 cut(s) 452
BbsI GAAGAC 3 cut(s) 342, 575, 1088
Bbv12I GWGCWC 6 cut(s) 171, 895, 1740, 2274, 2846, 3351
BbvCI CCTCAGC 1 cut(s) 180
BbvI GCAGC 3 cut(s) 235, 1093, 2407
BccI CCATC 9 cut(s) 58, 464, 940, 1327, 2029, 2123, 2764, 3209, 3332
BceAI ACGGC 1 cut(s) 862
BcgI CGANNNNNNTGC 2 cut(s) 833, 867
BciVI GTATCC 1 cut(s) 2810
BclI TGATCA 3 cut(s) 156, 625, 2154
BcoDI GTCTC 4 cut(s) 1671, 1821, 2175, 2378
BfaI CTAG 5 cut(s) 2183, 2354, 2633, 2876, 2894
BfmI CTRYAG 3 cut(s) 1655, 2907, 3270
BfuAI ACCTGC 1 cut(s) 436
BfuI GTATCC 1 cut(s) 2810
BglII AGATCT 4 cut(s) 1252, 1342, 2005, 2671
BisI GCNGC 4 cut(s) 249, 1107, 2396, 2921
BlpI GCTNAGC 1 cut(s) 582
BlsI GCNGC 4 cut(s) 250, 1108, 2397, 2922
BmcAI AGTACT 2 cut(s) 118, 2235
Bme18I GGWCC 1 cut(s) 1040
BmeRI GACNNNNNGTC 1 cut(s) 2167
BmeT110I CYCGRG 2 cut(s) 1538, 2939
BmgT120I GGNCC 2 cut(s) 875, 1040
BmiI GGNNCC 3 cut(s) 876, 2076, 2569
BmrI ACTGGG 1 cut(s) 2628
BmsI GCATC 7 cut(s) 166, 784, 947, 1968, 2425, 2764, 3189
BmtI GCTAGC 1 cut(s) 2186
BmuI ACTGGG 1 cut(s) 2628
BoxI GACNNNNGTC 1 cut(s) 315
BpiI GAAGAC 3 cut(s) 342, 575, 1088
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 4 cut(s) 909, 2285, 2568, 3083
Bpu10I CCTNAGC 2 cut(s) 180, 2478
Bpu1102I GCTNAGC 1 cut(s) 582
BpuEI CTTGAG 5 cut(s) 889, 1241, 1396, 1750, 2222
Bsa29I ATCGAT 1 cut(s) 300
BsaBI GATNNNNATC 3 cut(s) 768, 911, 2798
BsaJI CCNNGG 3 cut(s) 798, 1101, 3043
Bse3DI GCAATG 2 cut(s) 2825, 2987
Bse8I GATNNNNATC 3 cut(s) 768, 911, 2798
BseCI ATCGAT 1 cut(s) 300
BseDI CCNNGG 3 cut(s) 798, 1101, 3043
BseJI GATNNNNATC 3 cut(s) 768, 911, 2798
BseMI GCAATG 2 cut(s) 2825, 2987
BseRI GAGGAG 2 cut(s) 197, 2282
BseSI GKGCMC 1 cut(s) 2846
BseXI GCAGC 3 cut(s) 235, 1093, 2407
BseYI CCCAGC 1 cut(s) 996
Bsh1236I CGCG 1 cut(s) 3292
BshFI GGCC 2 cut(s) 877, 3042
BshVI ATCGAT 1 cut(s) 300
BsiHKAI GWGCWC 6 cut(s) 171, 895, 1740, 2274, 2846, 3351
BsiHKCI CYCGRG 2 cut(s) 1538, 2939
BsiSI CCGG 1 cut(s) 97
BslFI GGGAC 5 cut(s) 290, 1633, 2695, 3061, 3290
BsmAI GTCTC 4 cut(s) 1671, 1821, 2175, 2378
BsmBI CGTCTC 1 cut(s) 1671
BsmFI GGGAC 5 cut(s) 290, 1633, 2695, 3061, 3290
BsmI GAATGC 2 cut(s) 2140, 2741
BsnI GGCC 2 cut(s) 877, 3042
BsoBI CYCGRG 2 cut(s) 1538, 2939
Bsp1286I GDGCHC 6 cut(s) 171, 895, 1740, 2274, 2846, 3351
Bsp1720I GCTNAGC 1 cut(s) 582
BspANI GGCC 2 cut(s) 877, 3042
BspDI ATCGAT 1 cut(s) 300
BspFNI CGCG 1 cut(s) 3292
BspHI TCATGA 1 cut(s) 1588
BspLI GGNNCC 3 cut(s) 876, 2076, 2569
BspMI ACCTGC 1 cut(s) 436
BspOI GCTAGC 1 cut(s) 2186
BspPI GGATC 2 cut(s) 2484, 2866
BsrDI GCAATG 2 cut(s) 2825, 2987
BssECI CCNNGG 3 cut(s) 798, 1101, 3043
BssSI CACGAG 1 cut(s) 452
BssT1I CCWWGG 3 cut(s) 798, 1101, 3043
Bst2BI CACGAG 1 cut(s) 452
Bst4CI ACNGT 7 cut(s) 126, 464, 1005, 1175, 1849, 2122, 3271
Bst6I CTCTTC 4 cut(s) 40, 1063, 2856, 3337
BstC8I GCNNGC 2 cut(s) 1856, 2184
BstENI CCTNNNNNAGG 1 cut(s) 2910
BstFNI CGCG 1 cut(s) 3292
BstMAI GTCTC 4 cut(s) 1671, 1821, 2175, 2378
BstMWI GCNNNNNNNGC 3 cut(s) 226, 641, 1016
BstNSI RCATGY 1 cut(s) 1019
BstPAI GACNNNNGTC 1 cut(s) 315
BstSFI CTRYAG 3 cut(s) 1655, 2907, 3270
BstSLI GKGCMC 1 cut(s) 2846
BstUI CGCG 1 cut(s) 3292
BstV1I GCAGC 3 cut(s) 235, 1093, 2407
BstV2I GAAGAC 3 cut(s) 342, 575, 1088
BstX2I RGATCY 5 cut(s) 1252, 1342, 2005, 2489, 2671
BstXI CCANNNNNNTGG 1 cut(s) 1990
BstYI RGATCY 5 cut(s) 1252, 1342, 2005, 2489, 2671
Bsu15I ATCGAT 1 cut(s) 300
BsuI GTATCC 1 cut(s) 2810
BsuRI GGCC 2 cut(s) 877, 3042
BsuTUI ATCGAT 1 cut(s) 300
BtsI GCAGTG 1 cut(s) 2445
BtsIMutI CAGTG 9 cut(s) 171, 738, 863, 1180, 1854, 1983, 2164, 2445, 3059
BveI ACCTGC 1 cut(s) 436
Cac8I GCNNGC 2 cut(s) 1856, 2184
CciI TCATGA 1 cut(s) 1588
Cfr13I GGNCC 2 cut(s) 875, 1040
ClaI ATCGAT 1 cut(s) 300
CseI GACGC 1 cut(s) 3298
Csp6I GTAC 7 cut(s) 117, 460, 951, 1804, 2234, 2411, 2718
CspCI CAANNNNNGTGG 4 cut(s) 2545, 2580, 3019, 3054
CviAII CATG 8 cut(s) 553, 725, 1016, 1462, 1466, 1589, 1670, 2193
CviQI GTAC 7 cut(s) 117, 460, 951, 1804, 2234, 2411, 2718
DraIII CACNNNGTG 2 cut(s) 457, 1851
DriI GACNNNNNGTC 1 cut(s) 2167
EaeI YGGCCR 1 cut(s) 3040
Eam1104I CTCTTC 4 cut(s) 40, 1063, 2856, 3337
Eam1105I GACNNNNNGTC 1 cut(s) 2167
EarI CTCTTC 4 cut(s) 40, 1063, 2856, 3337
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 2 cut(s) 2272, 3349
Eco130I CCWWGG 3 cut(s) 798, 1101, 3043
Eco24I GRGCYC 2 cut(s) 2274, 3351
Eco32I GATATC 1 cut(s) 1954
Eco47I GGWCC 1 cut(s) 1040
Eco53kI GAGCTC 2 cut(s) 2272, 3349
Eco57I CTGAAG 4 cut(s) 1233, 1359, 3213, 3231
Eco88I CYCGRG 2 cut(s) 1538, 2939
EcoICRI GAGCTC 2 cut(s) 2272, 3349
EcoNI CCTNNNNNAGG 1 cut(s) 2910
EcoRI GAATTC 1 cut(s) 1554
EcoRV GATATC 1 cut(s) 1954
EcoT14I CCWWGG 3 cut(s) 798, 1101, 3043
EcoT22I ATGCAT 1 cut(s) 1467
EcoT38I GRGCYC 2 cut(s) 2274, 3351
ErhI CCWWGG 3 cut(s) 798, 1101, 3043
Esp3I CGTCTC 1 cut(s) 1671
FaeI CATG 8 cut(s) 556, 728, 1019, 1465, 1469, 1592, 1673, 2196
FalI AAGNNNNNCTT 6 cut(s) 366, 398, 782, 814, 2311, 2343
FaqI GGGAC 5 cut(s) 290, 1633, 2695, 3061, 3290
FatI CATG 8 cut(s) 552, 724, 1015, 1461, 1465, 1588, 1669, 2192
FauI CCCGC 4 cut(s) 244, 655, 796, 3232
FauNDI CATATG 1 cut(s) 1181
FbaI TGATCA 3 cut(s) 156, 625, 2154
FblI GTMKAC 3 cut(s) 591, 2040, 2989
Fnu4HI GCNGC 4 cut(s) 249, 1107, 2396, 2921
FriOI GRGCYC 2 cut(s) 2274, 3351
Fsp4HI GCNGC 4 cut(s) 249, 1107, 2396, 2921
FspBI CTAG 5 cut(s) 2183, 2354, 2633, 2876, 2894
GluI GCNGC 4 cut(s) 249, 1107, 2396, 2921
GsaI CCCAGC 1 cut(s) 1000
GsuI CTGGAG 4 cut(s) 909, 2285, 2568, 3083
HaeIII GGCC 2 cut(s) 877, 3042
HapII CCGG 1 cut(s) 97
HgaI GACGC 1 cut(s) 3298
Hin1II CATG 8 cut(s) 556, 728, 1019, 1465, 1469, 1592, 1673, 2196
HincII GTYRAC 1 cut(s) 138
HindII GTYRAC 1 cut(s) 138
HindIII AAGCTT 3 cut(s) 669, 2752, 3013
HpaII CCGG 1 cut(s) 97
HphI GGTGA 6 cut(s) 220, 485, 610, 956, 1450, 2222
Hpy166II GTNNAC 8 cut(s) 138, 460, 592, 1043, 1613, 2041, 2844, 2990
Hpy8I GTNNAC 8 cut(s) 138, 460, 592, 1043, 1613, 2041, 2844, 2990
Hpy99I CGWCG 2 cut(s) 86, 176
HpyAV CCTTC 3 cut(s) 784, 2759, 2865
HpyCH4III ACNGT 7 cut(s) 126, 464, 1005, 1175, 1849, 2122, 3271
HpyCH4IV ACGT 2 cut(s) 699, 1035
HpyF10VI GCNNNNNNNGC 3 cut(s) 226, 641, 1016
HpySE526I ACGT 2 cut(s) 699, 1035
Hsp92II CATG 8 cut(s) 556, 728, 1019, 1465, 1469, 1592, 1673, 2196
Ksp22I TGATCA 3 cut(s) 156, 625, 2154
LmnI GCTCC 7 cut(s) 23, 728, 890, 2074, 2250, 2269, 3354
Lsp1109I GCAGC 3 cut(s) 235, 1093, 2407
LweI GCATC 7 cut(s) 166, 784, 947, 1968, 2425, 2764, 3189
MaeI CTAG 5 cut(s) 2183, 2354, 2633, 2876, 2894
MaeII ACGT 2 cut(s) 699, 1035
MfeI CAATTG 4 cut(s) 268, 785, 1827, 2277
MflI RGATCY 5 cut(s) 1252, 1342, 2005, 2489, 2671
MhlI GDGCHC 6 cut(s) 171, 895, 1740, 2274, 2846, 3351
MlsI TGGCCA 1 cut(s) 3042
MluNI TGGCCA 1 cut(s) 3042
MlyI GAGTC 4 cut(s) 1526, 2177, 2453, 2991
MmeI TCCRAC 8 cut(s) 243, 678, 1293, 1363, 1500, 1866, 2035, 2272
Mox20I TGGCCA 1 cut(s) 3042
Mph1103I ATGCAT 1 cut(s) 1467
MroXI GAANNNNTTC 4 cut(s) 339, 2323, 2754, 2901
MscI TGGCCA 1 cut(s) 3042
MseI TTAA 8 cut(s) 129, 231, 696, 705, 2069, 2786, 2930, 3017
MslI CAYNNNNRTG 2 cut(s) 1988, 2516
Msp20I TGGCCA 1 cut(s) 3042
MspI CCGG 1 cut(s) 97
MunI CAATTG 4 cut(s) 268, 785, 1827, 2277
Mva1269I GAATGC 2 cut(s) 2140, 2741
MvnI CGCG 1 cut(s) 3292
MwoI GCNNNNNNNGC 3 cut(s) 226, 641, 1016
NdeI CATATG 1 cut(s) 1181
NheI GCTAGC 1 cut(s) 2182
NlaIII CATG 8 cut(s) 556, 728, 1019, 1465, 1469, 1592, 1673, 2196
NlaIV GGNNCC 3 cut(s) 876, 2076, 2569
NmuCI GTSAC 5 cut(s) 473, 1175, 2021, 2159, 3121
NsiI ATGCAT 1 cut(s) 1467
NspI RCATGY 1 cut(s) 1019
OliI CACNNNNGTG 1 cut(s) 1988
PaeR7I CTCGAG 2 cut(s) 1538, 2939
PagI TCATGA 1 cut(s) 1588
PcsI WCGNNNNNNNCGW 1 cut(s) 306
PctI GAATGC 2 cut(s) 2140, 2741
PdmI GAANNNNTTC 4 cut(s) 339, 2323, 2754, 2901
PflFI GACNNNGTC 2 cut(s) 281, 2027
PflMI CCANNNNNTGG 1 cut(s) 2390
PkrI GCNGC 4 cut(s) 250, 1108, 2397, 2922
PleI GAGTC 4 cut(s) 1526, 2176, 2452, 2991
PpsI GAGTC 4 cut(s) 1526, 2176, 2452, 2991
PshAI GACNNNNGTC 1 cut(s) 315
PsiI TTATAA 1 cut(s) 1443
Psp124BI GAGCTC 2 cut(s) 2274, 3351
Psp1406I AACGTT 1 cut(s) 1035
PspFI CCCAGC 1 cut(s) 996
PspN4I GGNNCC 3 cut(s) 876, 2076, 2569
PspPI GGNCC 2 cut(s) 875, 1040
PspXI VCTCGAGB 2 cut(s) 1538, 2939
PsuI RGATCY 5 cut(s) 1252, 1342, 2005, 2489, 2671
PsyI GACNNNGTC 2 cut(s) 281, 2027
RsaI GTAC 7 cut(s) 118, 461, 952, 1805, 2235, 2412, 2719
RsaNI GTAC 7 cut(s) 117, 460, 951, 1804, 2234, 2411, 2718
RseI CAYNNNNRTG 2 cut(s) 1988, 2516
SacI GAGCTC 2 cut(s) 2274, 3351
SaqAI TTAA 8 cut(s) 129, 231, 696, 705, 2069, 2786, 2930, 3017
SatI GCNGC 4 cut(s) 249, 1107, 2396, 2921
Sau96I GGNCC 2 cut(s) 875, 1040
ScaI AGTACT 2 cut(s) 118, 2235
SchI GAGTC 4 cut(s) 1526, 2177, 2453, 2991
SduI GDGCHC 6 cut(s) 171, 895, 1740, 2274, 2846, 3351
SfaNI GCATC 7 cut(s) 166, 784, 947, 1968, 2425, 2764, 3189
SfcI CTRYAG 3 cut(s) 1655, 2907, 3270
Sfr274I CTCGAG 2 cut(s) 1538, 2939
SinI GGWCC 1 cut(s) 1040
SlaI CTCGAG 2 cut(s) 1538, 2939
SmiMI CAYNNNNRTG 2 cut(s) 1988, 2516
SmlI CTYRAG 7 cut(s) 868, 1256, 1411, 1538, 1729, 2237, 2939
SmoI CTYRAG 7 cut(s) 868, 1256, 1411, 1538, 1729, 2237, 2939
SspMI CTAG 5 cut(s) 2183, 2354, 2633, 2876, 2894
SstI GAGCTC 2 cut(s) 2274, 3351
StyI CCWWGG 3 cut(s) 798, 1101, 3043
TaaI ACNGT 7 cut(s) 126, 464, 1005, 1175, 1849, 2122, 3271
TaiI ACGT 2 cut(s) 702, 1038
TatI WGTACW 2 cut(s) 116, 2233
TauI GCSGC 1 cut(s) 2923
Tru1I TTAA 8 cut(s) 129, 231, 696, 705, 2069, 2786, 2930, 3017
Tru9I TTAA 8 cut(s) 129, 231, 696, 705, 2069, 2786, 2930, 3017
TscAI CASTG 9 cut(s) 171, 745, 863, 1180, 1854, 1990, 2164, 2445, 3066
TseFI GTSAC 5 cut(s) 473, 1175, 2021, 2159, 3121
TseI GCWGC 3 cut(s) 248, 1106, 2395
Tsp45I GTSAC 5 cut(s) 473, 1175, 2021, 2159, 3121
TspGWI ACGGA 2 cut(s) 1653, 2792
TspRI CASTG 9 cut(s) 171, 745, 863, 1180, 1854, 1990, 2164, 2445, 3066
Tth111I GACNNNGTC 2 cut(s) 281, 2027
Van91I CCANNNNNTGG 1 cut(s) 2390
VneI GTGCAC 1 cut(s) 2842
VpaK11BI GGWCC 1 cut(s) 1040
XagI CCTNNNNNAGG 1 cut(s) 2910
XapI RAATTY 8 cut(s) 305, 692, 1301, 1490, 1554, 1592, 2366, 2743
XceI RCATGY 1 cut(s) 1019
XcmI CCANNNNNNNNNTGG 2 cut(s) 722, 1495
XhoI CTCGAG 2 cut(s) 1538, 2939
XmiI GTMKAC 3 cut(s) 591, 2040, 2989
XmnI GAANNNNTTC 4 cut(s) 339, 2323, 2754, 2901
XspI CTAG 5 cut(s) 2183, 2354, 2633, 2876, 2894
ZrmI AGTACT 2 cut(s) 118, 2235
Zsp2I ATGCAT 1 cut(s) 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.