MD03G1026000.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
2115045 .. 2126349
11305 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1026000.v1.1.491

Sequence Viewer

Length: 3009 bp
ATGGCTTTCGTTGGAGAGGCTTTGCTCTCCGGTTCCATCCAGTTGCTGTGCGACAAGATTGCCTCCGGAGAGTTCATAGACTTCTTCCGGGCAGGAAGACTCGACTATTCACTCCTGGACACACTGAAGATGAAGTTGGTGAATCTCCGTGCAGTGCTCAACGACGCTGAGGAGAAGCAGATTGTCGACCCTGACGTCGGGAAGTGGCTTGATGAGCTCAAACATGCTGTGTTCGAGGCCGAGGACTTGGTGGATGAGATCGATACTGAAGTTTCGCGTCGCAAGGCGAAAGATCAGACTAAGAAAACCCAGGTGTGGAACTTCCTTTCTACCTGTCGTAAACCTTTTAATTATAAAGGCATGAATGGTAGGATAGAAGTTTTATTCAAGAAGTTGGAACACCTTGCAAATCAAAAAGATATCCTCCGTCTTAGAGAAGATGTTGTTGGAGGCAATGTTTCACAAAGAACTCCCACAACTTCTGTTGTTGAGGGCGGATTTTATACCTATGGTAGGGATGGAGATAAAGACAAGTTAAAAGATCTACTGCTGTTATCTGACAATGAAAGTAGCAGTAATTTTTCTGTAGTCCCTATAGTCGGTATGGGCGGGGTTGGTAAGACAACTCTTGCTCAACTCCTTTTCAACGATGAACGAGTTAAAAAGCACTTTGACATTCATGCTTGGGTTTGTGTTTCCGAACAGTATGAGGCTTTGAGGGTTATTAAGGCCCTTATTCAGGAAATCACTAAAAAGCCTTGTGAAAATTTGGAGATGAATTCCCTTGAAGTTCAACTAAGGGAACAACTGAGTGGAAAGAGATTTTTACTTGTCTTGGATGACCTTTGGAATGAAAACTATGATGACTGGGAGCGTCTACGAATTCTTTTCACGTATGGGGCAAGGGGAAGTAAGGTCATTGTAACAACAAGGAGCAGGCGTGTTGCAGCCATCGTGCACAATACTATTCCTATTCACGATTTAAAAGAATTGTTGGATGAAGACTGCTGGTCGTTACTGGAAAAACATGCATTTAGAAATGAAAACCCCGGTGCACATCCAGACTTGGTTGAAATTGGTAAGCAAATTGCACGTAAGTGCAACGGTTTACCTCTAGCCGCAAAAACGCTAGGGGGTCTCTTAAGTTGCAACCTAGACTACAAGGAGTGGAATCACATATTGGATAGTAATCTTTGGGATCTGCCACACCCTAATAGTCTTCTTCCTTCTCTAAGATTGAGTTACCACTATCTTCCGGCTTACTTGAAACGATGCTTTGCTTATTGCTCAATCTTTCCAAAGGACTATGAGTTTGAAAAGAAAAATGTTATTCTACTATGGGTGGCAGAAGGTTTAATTCCACAATTAGAGAGCAAGAAAGCAATGGAGGAGGTTGGTGAAAGGTACTTTAATGAACTGTTATCGCGTTCACTATTTCAAAGACCAAGATTGGATAAACCAAGTTTCACTATGCATGATCTTATTAATGACTTGGCTATGTTTGTGTCTGGAGAGTTTTGTTTGAGGTTGGATCAAAAAAATTCGCACGAAGTTTCTAAAAAAGTTCGCCACTTGTCATATATGAGAGGAAAATTTGATACATCTCCAATATTTGAGCCATTAAAAGGAGTTAAGTGTTTGCGTACCTTCTTTCCAGTGTCTTTACCACCACATTATAGTTGGAATGGTGGATATGTAAGCAATAAGATTCTAGATGATTTATTGCCAGCACAAAAATGTTTACGGGCAATTTCATTATCAAGATATATGAATATCACTCACTTACCTGATTCCATTGGTAACCACATGCACTTGCGCTACATTGATCTCTCTTATACGGCAATTAAAAGGTTATCAGATAGAGTGTGTACTCTCTACAATTTACAAACTCTATTGTTGTTAGGTTGTTCTTCTCTTGTTGAATTGCCTGCAGACATGAGGAAATTGATTCATTTGCGTCATCTTGATATTGGTGGAACTAAAATAAAAGAGATGCCGGTGCATATGGGTAGACTAAAAAGTTTGAGAACACTGACAGCTTTTGTGCTGGGGAAATCTACTGGGTCCAATATTGGAGAACTGAGGGAGTTGTCGCACCTTGGAGGAAAAATTTCCATCTTGAATCTGCAAAATGTAGTCGGTGCTATTGATGCGTTGTTGAAGGATAAGAAAGATCTCAAAGAGGTAGAGTTGGCATGGGGTCCTGAAGTTTCCGATGATTTTGTAAAAGAGAGACATGTACTCGAAAGACTACAGCCTTCGGTAAATTTGGTGAAACTAACCGTCAGGTGTTATGGCGGAATCAGTTTCCCGAATTGGGTGGGAGACTCGTCCTTCTCCAACTTACAAGTGATGCGTCTCAATGACTGTAGTAATTGCAGTTCATTGCCACTAGTTGGTCAGCTACCTGCTCTGAAAGAGCTCTACGTAGAAAGGATGAAAGTTGTTAAGAGTGTTGGTGTTGAGTTGTACGGGGGAAATCAACCATTTCAATGTTTAGAGAAGCTAGAGTTTCGGGAGATGCCAGAGTGGGAAGAATGGCAGCCAAGTCCAAGTGGAGGTGAAAGTCCAGGCTTTCCTCGTCTTAAGGAGCTGAGGTTACGCCAATGTCCGAAGCTGAGAGGAAGCTTGCCCACTCATCTTCCTTCCTTGAAAATCCTTTGGGTCGATGGATGTAAGGTTCTACATGAAAACAGGGCCAGTAATACTCTGAACACGGAATCCTTACGACGATCTCTTGAACAACTGACAATAAAGGGATGTCCGGGTCTCTCATTGTTACTCGAGTCGACGGAGACGCTGCCGTCGCTTCAGAGTCTTGATATTTACGATGATGGTGGGAGAGAGTGGTTGCCGCAAATGGTGCACAACAGCAATCATCTTCAAAGTTTGACATTATATGAATGTTGCTCACTCTTGTCGTTCCCTACAAATGGTCTGCCCACCACGCTGACGTCACTCCGTCGTTCCCTTTGGGCATTTTCCCCAACCTTTCATCTCTTCGTATAA

Protein Analysis

1003

Amino Acids

114.06

Weight (kDa)

8.04

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 39 - 102 4e-15 Rx N-terminal domain
NB-ARC PF00931 175 - 348 4.9e-41 NB-ARC domain
WHD_DRP PF23559 431 - 499 3.3e-25 Disease resistance protein Winged helix domain
LRR_14 PF23598 580 - 889 8e-27 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 691 - 813 1.3e-31 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 354
AasI GACNNNNNNGTC 2 cut(s) 194, 2803
AatII GACGTC 2 cut(s) 198, 2957
Acc36I ACCTGC 1 cut(s) 2416
AccB7I CCANNNNNTGG 1 cut(s) 2396
AccI GTMKAC 4 cut(s) 186, 877, 2011, 2789
AccII CGCG 2 cut(s) 277, 1426
AccIII TCCGGA 1 cut(s) 65
AciI CCGC 5 cut(s) 495, 609, 1119, 2298, 2855
AclWI GGATC 2 cut(s) 1206, 1539
AcsI RAATTY 7 cut(s) 766, 778, 882, 1540, 1592, 2109, 2266
AcuI CTGAAG 4 cut(s) 146, 288, 2226, 2795
AcyI GRCGYC 2 cut(s) 195, 2954
AfaI GTAC 5 cut(s) 1406, 1645, 1870, 2241, 2471
AflII CTTAAG 2 cut(s) 1141, 2585
AflIII ACRYGT 1 cut(s) 2236
AhdI GACNNNNNGTC 1 cut(s) 1009
AhlI ACTAGT 1 cut(s) 2392
AjnI CCWGG 3 cut(s) 114, 309, 2569
AjuI GAANNNNNNNTTGG 6 cut(s) 119, 151, 429, 461, 1163, 1195
AleI CACNNNNGTG 1 cut(s) 1096
AloI GAACNNNNNNTCC 4 cut(s) 2664, 2696, 2705, 2737
AluBI AGCT 8 cut(s) 217, 2039, 2404, 2422, 2506, 2593, 2617, 2628
AluI AGCT 8 cut(s) 217, 2039, 2404, 2422, 2506, 2593, 2617, 2628
Alw21I GWGCWC 6 cut(s) 159, 219, 960, 1057, 2424, 2868
Alw26I GTCTC 6 cut(s) 1142, 2227, 2319, 2363, 2774, 2789
Alw44I GTGCAC 3 cut(s) 956, 1053, 2864
AlwI GGATC 2 cut(s) 1206, 1539
AlwNI CAGNNNCTG 1 cut(s) 46
Ama87I CYCGRG 1 cut(s) 2783
Aor13HI TCCGGA 1 cut(s) 65
AoxI GGCC 3 cut(s) 237, 729, 2697
ApaLI GTGCAC 3 cut(s) 956, 1053, 2864
ApeKI GCWGC 3 cut(s) 947, 2542, 2800
ApoI RAATTY 7 cut(s) 766, 778, 882, 1540, 1592, 2109, 2266
ArsI GACNNNNNNTTYG 2 cut(s) 1295, 1327
AseI ATTAAT 1 cut(s) 1485
Asp700I GAANNNNTTC 1 cut(s) 2110
AspLEI GCGC 1 cut(s) 1818
AspS9I GGNCC 4 cut(s) 730, 2064, 2201, 2697
AsuC2I CCSGG 3 cut(s) 89, 1050, 2766
AsuHPI GGTGA 4 cut(s) 151, 1409, 2284, 2573
AvaI CYCGRG 1 cut(s) 2783
AvaII GGWCC 2 cut(s) 2064, 2201
BaeGI GKGCMC 3 cut(s) 960, 1057, 2868
BaeI ACNNNNGTAYC 2 cut(s) 255, 288
BanII GRGCYC 2 cut(s) 219, 2424
BbsI GAAGAC 3 cut(s) 103, 1008, 1211
Bbv12I GWGCWC 6 cut(s) 159, 219, 960, 1057, 2424, 2868
BbvCI CCTCAGC 2 cut(s) 168, 2594
BbvI GCAGC 3 cut(s) 959, 2554, 2787
BccI CCATC 6 cut(s) 44, 512, 959, 2123, 2663, 2828
BceAI ACGGC 2 cut(s) 1854, 2788
BcgI CGANNNNNNTGC 2 cut(s) 41, 75
BciT130I CCWGG 3 cut(s) 116, 311, 2571
BcnI CCSGG 3 cut(s) 89, 1050, 2766
BcoDI GTCTC 6 cut(s) 1142, 2227, 2319, 2363, 2774, 2789
BcuI ACTAGT 1 cut(s) 2392
BfaI CTAG 6 cut(s) 1115, 1130, 1154, 1712, 2393, 2507
BfmI CTRYAG 5 cut(s) 585, 594, 1929, 2252, 2368
BfrI CTTAAG 2 cut(s) 1141, 2585
BfuAI ACCTGC 1 cut(s) 2416
BglII AGATCT 2 cut(s) 541, 2173
BisI GCNGC 5 cut(s) 948, 1119, 2543, 2801, 2855
BlsI GCNGC 5 cut(s) 949, 1120, 2544, 2802, 2856
Bme1390I CCNGG 6 cut(s) 89, 116, 311, 1050, 2571, 2766
Bme18I GGWCC 2 cut(s) 2064, 2201
BmeRI GACNNNNNGTC 1 cut(s) 1009
BmeT110I CYCGRG 1 cut(s) 2783
BmgT120I GGNCC 4 cut(s) 730, 2064, 2201, 2697
BmiI GGNNCC 3 cut(s) 34, 2065, 2202
BmrFI CCNGG 6 cut(s) 89, 116, 311, 1050, 2571, 2766
BmrI ACTGGG 2 cut(s) 877, 2070
BmsI GCATC 5 cut(s) 1262, 1983, 2140, 2343, 2511
BmuI ACTGGG 2 cut(s) 877, 2070
BpiI GAAGAC 3 cut(s) 103, 1008, 1211
BpmI CTGGAG 1 cut(s) 1530
Bpu10I CCTNAGC 2 cut(s) 168, 2594
BpuMI CCSGG 3 cut(s) 89, 1050, 2766
Bsa29I ATCGAT 1 cut(s) 261
BsaAI YACGTR 3 cut(s) 894, 1094, 2428
BsaBI GATNNNNATC 1 cut(s) 1188
BsaHI GRCGYC 2 cut(s) 195, 2954
BsaI GGTCTC 2 cut(s) 1142, 2774
BsaJI CCNNGG 4 cut(s) 240, 309, 1048, 2098
BsaWI WCCGGW 2 cut(s) 29, 65
BsaXI ACNNNNNCTCC 6 cut(s) 441, 471, 925, 955, 2582, 2612
Bse118I RCCGGY 1 cut(s) 1996
Bse1I ACTGG 6 cut(s) 40, 872, 1023, 1655, 2065, 2700
Bse3DI GCAATG 3 cut(s) 460, 1389, 2384
Bse8I GATNNNNATC 1 cut(s) 1188
BseAI TCCGGA 1 cut(s) 65
BseBI CCWGG 3 cut(s) 116, 311, 2571
BseCI ATCGAT 1 cut(s) 261
BseDI CCNNGG 4 cut(s) 240, 309, 1048, 2098
BseGI GGATG 9 cut(s) 36, 259, 523, 844, 1003, 1057, 2442, 2678, 2765
BseJI GATNNNNATC 1 cut(s) 1188
BseMI GCAATG 3 cut(s) 460, 1389, 2384
BseMII CTCAG 5 cut(s) 159, 800, 2072, 2585, 2609
BseNI ACTGG 6 cut(s) 40, 872, 1023, 1655, 2065, 2700
BseRI GAGGAG 2 cut(s) 185, 1403
BseSI GKGCMC 3 cut(s) 960, 1057, 2868
BseXI GCAGC 3 cut(s) 959, 2554, 2787
BseYI CCCAGC 1 cut(s) 2047
BsgI GTGCAG 1 cut(s) 171
Bsh1236I CGCG 2 cut(s) 277, 1426
BshFI GGCC 3 cut(s) 239, 731, 2699
BshVI ATCGAT 1 cut(s) 261
BsiHKAI GWGCWC 6 cut(s) 159, 219, 960, 1057, 2424, 2868
BsiHKCI CYCGRG 1 cut(s) 2783
BsiSI CCGG 7 cut(s) 30, 66, 88, 1050, 1256, 1997, 2765
BslFI GGGAC 1 cut(s) 575
BsmAI GTCTC 6 cut(s) 1142, 2227, 2319, 2363, 2774, 2789
BsmBI CGTCTC 2 cut(s) 2363, 2789
BsmFI GGGAC 1 cut(s) 575
BsnI GGCC 3 cut(s) 239, 731, 2699
Bso31I GGTCTC 2 cut(s) 1142, 2774
BsoBI CYCGRG 1 cut(s) 2783
Bsp1286I GDGCHC 6 cut(s) 159, 219, 960, 1057, 2424, 2868
Bsp13I TCCGGA 1 cut(s) 65
Bsp143I GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
BspACI CCGC 5 cut(s) 495, 609, 1119, 2298, 2855
BspANI GGCC 3 cut(s) 239, 731, 2699
BspCNI CTCAG 5 cut(s) 160, 801, 2073, 2586, 2610
BspDI ATCGAT 1 cut(s) 261
BspEI TCCGGA 1 cut(s) 65
BspFNI CGCG 2 cut(s) 277, 1426
BspLI GGNNCC 3 cut(s) 34, 2065, 2202
BspMAI CTGCAG 1 cut(s) 1933
BspMI ACCTGC 1 cut(s) 2416
BspPI GGATC 2 cut(s) 1206, 1539
BspTI CTTAAG 2 cut(s) 1141, 2585
BspTNI GGTCTC 2 cut(s) 1142, 2774
BsrDI GCAATG 3 cut(s) 460, 1389, 2384
BsrFI RCCGGY 1 cut(s) 1996
BsrI ACTGG 6 cut(s) 40, 872, 1023, 1655, 2065, 2700
BssAI RCCGGY 1 cut(s) 1996
BssECI CCNNGG 4 cut(s) 240, 309, 1048, 2098
BssMI GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
BssNI GRCGYC 2 cut(s) 195, 2954
BssT1I CCWWGG 1 cut(s) 2098
Bst2UI CCWGG 3 cut(s) 116, 311, 2571
Bst4CI ACNGT 5 cut(s) 705, 1106, 1419, 2284, 2369
Bst6I CTCTTC 1 cut(s) 3005
BstACI GRCGYC 2 cut(s) 195, 2954
BstAFI CTTAAG 2 cut(s) 1141, 2585
BstAPI GCANNNNNTGC 1 cut(s) 2863
BstBAI YACGTR 3 cut(s) 894, 1094, 2428
BstC8I GCNNGC 4 cut(s) 938, 1728, 1929, 2630
BstDEI CTNAG 9 cut(s) 168, 300, 431, 797, 809, 1232, 2081, 2594, 2618
BstEII GGTNACC 1 cut(s) 1799
BstENI CCTNNNNNAGG 2 cut(s) 511, 737
BstF5I GGATG 9 cut(s) 36, 259, 523, 844, 1003, 1057, 2442, 2678, 2765
BstFNI CGCG 2 cut(s) 277, 1426
BstHHI GCGC 1 cut(s) 1818
BstKTI GATC 9 cut(s) 261, 295, 544, 1201, 1480, 1534, 1828, 2176, 2735
BstMAI GTCTC 6 cut(s) 1142, 2227, 2319, 2363, 2774, 2789
BstMBI GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
BstMWI GCNNNNNNNGC 5 cut(s) 214, 2150, 2806, 2863, 2947
BstNI CCWGG 3 cut(s) 116, 311, 2571
BstNSI RCATGY 4 cut(s) 227, 1031, 1810, 2240
BstPI GGTNACC 1 cut(s) 1799
BstSCI CCNGG 6 cut(s) 87, 114, 309, 1048, 2569, 2764
BstSFI CTRYAG 5 cut(s) 585, 594, 1929, 2252, 2368
BstSLI GKGCMC 3 cut(s) 960, 1057, 2868
BstSNI TACGTA 1 cut(s) 2428
BstUI CGCG 2 cut(s) 277, 1426
BstV1I GCAGC 3 cut(s) 959, 2554, 2787
BstV2I GAAGAC 3 cut(s) 103, 1008, 1211
BstX2I RGATCY 3 cut(s) 541, 1198, 2173
BstYI RGATCY 3 cut(s) 541, 1198, 2173
Bsu15I ATCGAT 1 cut(s) 261
BsuRI GGCC 3 cut(s) 239, 731, 2699
BsuTUI ATCGAT 1 cut(s) 261
BtsCI GGATG 9 cut(s) 36, 259, 523, 844, 1003, 1057, 2442, 2678, 2765
BtsI GCAGTG 1 cut(s) 159
BtsIMutI CAGTG 4 cut(s) 122, 159, 1662, 2030
BveI ACCTGC 1 cut(s) 2416
Cac8I GCNNGC 4 cut(s) 938, 1728, 1929, 2630
CaiI CAGNNNCTG 1 cut(s) 46
CfoI GCGC 1 cut(s) 1818
Cfr10I RCCGGY 1 cut(s) 1996
Cfr13I GGNCC 4 cut(s) 730, 2064, 2201, 2697
ClaI ATCGAT 1 cut(s) 261
CseI GACGC 6 cut(s) 173, 266, 863, 1946, 2345, 2806
Csp6I GTAC 5 cut(s) 1405, 1644, 1869, 2240, 2470
CviQI GTAC 5 cut(s) 1405, 1644, 1869, 2240, 2470
DdeI CTNAG 9 cut(s) 168, 300, 431, 797, 809, 1232, 2081, 2594, 2618
DpnI GATC 9 cut(s) 260, 294, 543, 1200, 1479, 1533, 1827, 2175, 2734
DpnII GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
DraI TTTAAA 1 cut(s) 984
DrdI GACNNNNNNGTC 2 cut(s) 194, 2803
DriI GACNNNNNGTC 1 cut(s) 1009
DseDI GACNNNNNNGTC 2 cut(s) 194, 2803
Eam1104I CTCTTC 1 cut(s) 3005
Eam1105I GACNNNNNGTC 1 cut(s) 1009
EarI CTCTTC 1 cut(s) 3005
EciI GGCGGA 2 cut(s) 510, 2313
Ecl136II GAGCTC 2 cut(s) 217, 2422
Eco105I TACGTA 1 cut(s) 2428
Eco130I CCWWGG 1 cut(s) 2098
Eco24I GRGCYC 2 cut(s) 219, 2424
Eco31I GGTCTC 2 cut(s) 1142, 2774
Eco32I GATATC 1 cut(s) 421
Eco47I GGWCC 2 cut(s) 2064, 2201
Eco53kI GAGCTC 2 cut(s) 217, 2422
Eco57I CTGAAG 4 cut(s) 146, 288, 2226, 2795
Eco88I CYCGRG 1 cut(s) 2783
Eco91I GGTNACC 1 cut(s) 1799
EcoICRI GAGCTC 2 cut(s) 217, 2422
EcoNI CCTNNNNNAGG 2 cut(s) 511, 737
EcoO109I RGGNCCY 2 cut(s) 730, 2201
EcoO65I GGTNACC 1 cut(s) 1799
EcoRI GAATTC 2 cut(s) 778, 882
EcoRII CCWGG 3 cut(s) 114, 309, 2569
EcoRV GATATC 1 cut(s) 421
EcoT14I CCWWGG 1 cut(s) 2098
EcoT22I ATGCAT 2 cut(s) 1033, 1476
EcoT38I GRGCYC 2 cut(s) 219, 2424
ErhI CCWWGG 1 cut(s) 2098
Esp3I CGTCTC 2 cut(s) 2363, 2789
FaqI GGGAC 1 cut(s) 575
FauI CCCGC 1 cut(s) 602
FauNDI CATATG 1 cut(s) 2004
FblI GTMKAC 4 cut(s) 186, 877, 2011, 2789
Fnu4HI GCNGC 5 cut(s) 948, 1119, 2543, 2801, 2855
FokI GGATG 9 cut(s) 23, 266, 530, 851, 1010, 1044, 2449, 2685, 2772
FriOI GRGCYC 2 cut(s) 219, 2424
Fsp4HI GCNGC 5 cut(s) 948, 1119, 2543, 2801, 2855
FspBI CTAG 6 cut(s) 1115, 1130, 1154, 1712, 2393, 2507
GlaI GCGC 1 cut(s) 1817
GluI GCNGC 5 cut(s) 948, 1119, 2543, 2801, 2855
GsaI CCCAGC 1 cut(s) 2051
GsuI CTGGAG 1 cut(s) 1530
HaeIII GGCC 3 cut(s) 239, 731, 2699
HapII CCGG 7 cut(s) 30, 66, 88, 1050, 1256, 1997, 2765
HgaI GACGC 6 cut(s) 173, 266, 863, 1946, 2345, 2806
HhaI GCGC 1 cut(s) 1818
Hin1I GRCGYC 2 cut(s) 195, 2954
Hin6I GCGC 1 cut(s) 1816
HinP1I GCGC 1 cut(s) 1816
HincII GTYRAC 2 cut(s) 187, 2790
HindII GTYRAC 2 cut(s) 187, 2790
HindIII AAGCTT 1 cut(s) 2626
HpaII CCGG 7 cut(s) 30, 66, 88, 1050, 1256, 1997, 2765
HphI GGTGA 4 cut(s) 151, 1409, 2284, 2573
Hpy188I TCNGA 9 cut(s) 297, 559, 700, 1858, 2215, 2415, 2613, 2712, 2814
Hpy99I CGWCG 7 cut(s) 167, 200, 282, 2733, 2794, 2809, 2967
HpyAV CCTTC 7 cut(s) 1236, 1343, 1657, 2155, 2268, 2344, 2655
HpyCH4III ACNGT 5 cut(s) 705, 1106, 1419, 2284, 2369
HpyCH4IV ACGT 5 cut(s) 195, 893, 1093, 2427, 2954
HpyF10VI GCNNNNNNNGC 5 cut(s) 214, 2150, 2806, 2863, 2947
HpyF3I CTNAG 9 cut(s) 168, 300, 431, 797, 809, 1232, 2081, 2594, 2618
HpySE526I ACGT 5 cut(s) 195, 893, 1093, 2427, 2954
Hsp92I GRCGYC 2 cut(s) 195, 2954
HspAI GCGC 1 cut(s) 1816
Kpn2I TCCGGA 1 cut(s) 65
Kzo9I GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
LmnI GCTCC 3 cut(s) 871, 933, 2590
Lsp1109I GCAGC 3 cut(s) 959, 2554, 2787
LweI GCATC 5 cut(s) 1262, 1983, 2140, 2343, 2511
MaeI CTAG 6 cut(s) 1115, 1130, 1154, 1712, 2393, 2507
MaeII ACGT 5 cut(s) 195, 893, 1093, 2427, 2954
MaeIII GTNAC 7 cut(s) 922, 1014, 1241, 1799, 2598, 2778, 2955
MalI GATC 9 cut(s) 260, 294, 543, 1200, 1479, 1533, 1827, 2175, 2734
MboI GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
MflI RGATCY 3 cut(s) 541, 1198, 2173
MhlI GDGCHC 6 cut(s) 159, 219, 960, 1057, 2424, 2868
MlyI GAGTC 4 cut(s) 93, 2321, 2795, 2824
MmeI TCCRAC 6 cut(s) 375, 427, 975, 1509, 1661, 2364
Mph1103I ATGCAT 2 cut(s) 1033, 1476
MroI TCCGGA 1 cut(s) 65
MroXI GAANNNNTTC 1 cut(s) 2110
MslI CAYNNNNRTG 3 cut(s) 1096, 1735, 2491
MspCI CTTAAG 2 cut(s) 1141, 2585
MspI CCGG 7 cut(s) 30, 66, 88, 1050, 1256, 1997, 2765
MspR9I CCNGG 6 cut(s) 89, 116, 311, 1050, 2571, 2766
MvaI CCWGG 3 cut(s) 116, 311, 2571
MvnI CGCG 2 cut(s) 277, 1426
MwoI GCNNNNNNNGC 5 cut(s) 214, 2150, 2806, 2863, 2947
NciI CCSGG 3 cut(s) 89, 1050, 2766
NdeI CATATG 1 cut(s) 2004
NdeII GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
NlaIV GGNNCC 3 cut(s) 34, 2065, 2202
NmeAIII GCCGAG 1 cut(s) 265
NmuCI GTSAC 1 cut(s) 2955
NsiI ATGCAT 2 cut(s) 1033, 1476
NspI RCATGY 4 cut(s) 227, 1031, 1810, 2240
OliI CACNNNNGTG 1 cut(s) 1096
PaeR7I CTCGAG 1 cut(s) 2783
PciI ACATGT 1 cut(s) 2236
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PdmI GAANNNNTTC 1 cut(s) 2110
PfeI GAWTC 8 cut(s) 142, 1171, 1708, 1790, 1948, 2122, 2301, 2720
PflMI CCANNNNNTGG 1 cut(s) 2396
PfoI TCCNGGA 1 cut(s) 114
PkrI GCNGC 5 cut(s) 949, 1120, 2544, 2802, 2856
PleI GAGTC 4 cut(s) 93, 2321, 2794, 2823
PpsI GAGTC 4 cut(s) 93, 2321, 2794, 2823
Ppu21I YACGTR 3 cut(s) 894, 1094, 2428
PpuMI RGGWCCY 1 cut(s) 2201
PscI ACATGT 1 cut(s) 2236
PshBI ATTAAT 1 cut(s) 1485
PsiI TTATAA 1 cut(s) 354
Psp124BI GAGCTC 2 cut(s) 219, 2424
Psp5II RGGWCCY 1 cut(s) 2201
Psp6I CCWGG 3 cut(s) 114, 309, 2569
PspEI GGTNACC 1 cut(s) 1799
PspFI CCCAGC 1 cut(s) 2047
PspGI CCWGG 3 cut(s) 114, 309, 2569
PspN4I GGNNCC 3 cut(s) 34, 2065, 2202
PspPI GGNCC 4 cut(s) 730, 2064, 2201, 2697
PspPPI RGGWCCY 1 cut(s) 2201
PspXI VCTCGAGB 1 cut(s) 2783
PsrI GAACNNNNNNTAC 2 cut(s) 2365, 2397
PstI CTGCAG 1 cut(s) 1933
PstNI CAGNNNCTG 1 cut(s) 46
PsuI RGATCY 3 cut(s) 541, 1198, 2173
RsaI GTAC 5 cut(s) 1406, 1645, 1870, 2241, 2471
RsaNI GTAC 5 cut(s) 1405, 1644, 1869, 2240, 2470
RseI CAYNNNNRTG 3 cut(s) 1096, 1735, 2491
SacI GAGCTC 2 cut(s) 219, 2424
SalI GTCGAC 2 cut(s) 185, 2788
SatI GCNGC 5 cut(s) 948, 1119, 2543, 2801, 2855
Sau3AI GATC 9 cut(s) 258, 292, 541, 1198, 1477, 1531, 1825, 2173, 2732
Sau96I GGNCC 4 cut(s) 730, 2064, 2201, 2697
SchI GAGTC 4 cut(s) 93, 2321, 2795, 2824
ScrFI CCNGG 6 cut(s) 89, 116, 311, 1050, 2571, 2766
SduI GDGCHC 6 cut(s) 159, 219, 960, 1057, 2424, 2868
SfaNI GCATC 5 cut(s) 1262, 1983, 2140, 2343, 2511
SfcI CTRYAG 5 cut(s) 585, 594, 1929, 2252, 2368
Sfr274I CTCGAG 1 cut(s) 2783
SinI GGWCC 2 cut(s) 2064, 2201
SlaI CTCGAG 1 cut(s) 2783
SmiMI CAYNNNNRTG 3 cut(s) 1096, 1735, 2491
SmlI CTYRAG 3 cut(s) 1141, 2585, 2783
SmoI CTYRAG 3 cut(s) 1141, 2585, 2783
SnaBI TACGTA 1 cut(s) 2428
SpeI ACTAGT 1 cut(s) 2392
SsiI CCGC 5 cut(s) 495, 609, 1119, 2298, 2855
SspI AATATT 2 cut(s) 1611, 2071
SspMI CTAG 6 cut(s) 1115, 1130, 1154, 1712, 2393, 2507
SstI GAGCTC 2 cut(s) 219, 2424
StyD4I CCNGG 6 cut(s) 87, 114, 309, 1048, 2569, 2764
StyI CCWWGG 1 cut(s) 2098
TaaI ACNGT 5 cut(s) 705, 1106, 1419, 2284, 2369
TaiI ACGT 5 cut(s) 198, 896, 1096, 2430, 2957
TaqI TCGA 8 cut(s) 102, 186, 234, 261, 2244, 2667, 2784, 2789
TatI WGTACW 2 cut(s) 1868, 2239
TauI GCSGC 2 cut(s) 1121, 2857
TfiI GAWTC 8 cut(s) 142, 1171, 1708, 1790, 1948, 2122, 2301, 2720
TscAI CASTG 4 cut(s) 129, 159, 1662, 2037
TseFI GTSAC 1 cut(s) 2955
TseI GCWGC 3 cut(s) 947, 2542, 2800
Tsp45I GTSAC 1 cut(s) 2955
TspGWI ACGGA 5 cut(s) 137, 416, 2732, 2807, 2951
TspRI CASTG 4 cut(s) 129, 159, 1662, 2037
Van91I CCANNNNNTGG 1 cut(s) 2396
Vha464I CTTAAG 2 cut(s) 1141, 2585
VneI GTGCAC 3 cut(s) 956, 1053, 2864
VpaK11BI GGWCC 2 cut(s) 2064, 2201
VspI ATTAAT 1 cut(s) 1485
XagI CCTNNNNNAGG 2 cut(s) 511, 737
XapI RAATTY 7 cut(s) 766, 778, 882, 1540, 1592, 2109, 2266
XbaI TCTAGA 1 cut(s) 1711
XceI RCATGY 4 cut(s) 227, 1031, 1810, 2240
XcmI CCANNNNNNNNNTGG 1 cut(s) 1677
XhoI CTCGAG 1 cut(s) 2783
XmiI GTMKAC 4 cut(s) 186, 877, 2011, 2789
XmnI GAANNNNTTC 1 cut(s) 2110
XspI CTAG 6 cut(s) 1115, 1130, 1154, 1712, 2393, 2507
ZraI GACGTC 2 cut(s) 196, 2955
Zsp2I ATGCAT 2 cut(s) 1033, 1476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.