RchiOBHm_Chr1g0342481

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
34360075 .. 34364262
4188 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56910

Sequence Viewer

Length: 1512 bp
ATGTATACTTCTCCTTCTGGATTTGCTTATGACTTGTTCCTGAGCTTCAGAGGTGAAGACACCCGAAAGAACTTCACTGACCACCTCTACATGGCCCTTGTAAATGCCCGATTTCGAACTTTCTGGGATGACAGACTCGAGAAAGGGAAAAATATCAAGGAAGAGCTTGAGAATGCCATTCGACAGTCACGAAGTTCAGTCATTGTGTTTTCGAAAGACTACACCTCTTCCAAATGGTGCCTGGACGAGCTTGTCATGATCCTTGAACGCAAGAGGACCTCCAATCATGTCGTGTTACCGGTATTCTACGACGTTAATCCATCTCAACTGAGGAAACATGCAGAAACTCTTGCAAAGGTTCCTAAATACCAAGAAAATCAATCCTCGGAGAAGTTGAATGGATGGCGGGCAGCACTTAGAGAAGTTGCAGATCTAGCAGGAAATGTTTTAGAAAATGAAACTGACGGGATTGCAATTTATAGGCACGAGTCAAAGTTCATCCAAAAAATTGTTAGAGAGATTCAAGACAAGCTAGTTCGTGTGCCCCTAAGCGATGTCCGGAAGGAATTAGAAGATAAGTTGTTATCTGTTAACCCTGTTCTTGATGATGCCGAGGGGAAGCAGCTGAAATTCCAAACGACTCTGAAGCCATGGCTCCATAAGCTTAAAGAGACTGTCTATGAGGCAGAGGACCTGTTGCAGGAGATCAAAACAGAAGTGTTGAGGCAAAAGAACAATGATGAATATGGGAGTAGCAGCAGTAAGGTACAAGAGCTCATCTCTACTCCATCTCATGCTTTTGACTCAGTTTTAATATACTCCAGGGTAGAGGAAGTTCTTGAAAAACTAAACAACATTCCGAAGCAGACAAAAGATGTCTTGGATTCGGCAGTAACCGCTGGACACAGAGTATCACAAACACTACTGTCAACTTCTTTGGTAGAAAAGTCTGTGTCTGGAAGAGATGAAGAGAAAGAAACATTGGTTAAGTTATTGCTATCAGATGATGAGACTGGCAATAAAATAGGTGTGATTCCTATTGTGGGTATCGGTGGGATCGGAAAGACCACCCTTGCCCAGTTTCTATACAACGATGTTAGAGTCGAGCAACATTTTCACCTCCAAGCATGGGTTTGCGTTTCAAAAGAATTTGATGTTTTTAGGATCTCGCAACACATTTATGAGTCCCTTACTTCAAAAGCTTGCCAAAGCACAAACCTAGATCTGCTTCTATCAAAGTTGCAGGCAACTTTGAGGGGGAAAAGGTTCTTCTTTGTTCTTGATGACATCTGGAAGAAGAATTATAACCAGCTGGAATTCTTAATGCGTCCCCTTGAGTCTGGAGCACATGGAATCAAGATCATTGTCACAACACGTGATGAAAATATTGCACGTATGATGGGTAGCCTTGAAGCTCACCATCTCATGCCAATGTCTGAGGAAGATAGCTGGTCGTTATTCGAAAAACATGCCTTCAAAAATTGCAGGTGTTGGTACACACTTACATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

503

Amino Acids

57.93

Weight (kDa)

6.43

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 9 - 184 5.2e-42 TIR domain
TIR_2 PF13676 13 - 110 1.7e-16 TIR domain
Rx_N PF18052 186 - 251 2e-12 Rx N-terminal domain
NB-ARC PF00931 323 - 494 2.7e-37 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1305
AarI CACCTGC 1 cut(s) 1476
AasI GACNNNNNNGTC 1 cut(s) 251
Acc36I ACCTGC 1 cut(s) 1476
AccB1I GGYRCC 1 cut(s) 237
AccI GTMKAC 1 cut(s) 5
AccIII TCCGGA 1 cut(s) 558
AciI CCGC 2 cut(s) 406, 897
AclWI GGATC 3 cut(s) 253, 1064, 1172
AcsI RAATTY 3 cut(s) 629, 1148, 1316
AcuI CTGAAG 2 cut(s) 31, 665
AcvI CACGTG 1 cut(s) 1376
AfaI GTAC 2 cut(s) 768, 1496
AfiI CCNNNNNNNGG 4 cut(s) 91, 700, 1043, 1129
AflIII ACRYGT 1 cut(s) 1373
AgeI ACCGGT 1 cut(s) 298
AgsI TTSAA 8 cut(s) 266, 397, 524, 842, 1143, 1197, 1412, 1477
AjnI CCWGG 2 cut(s) 240, 821
AjuI GAANNNNNNNTTGG 2 cut(s) 965, 997
Alw21I GWGCWC 2 cut(s) 777, 1348
Alw26I GTCTC 2 cut(s) 665, 1004
AlwI GGATC 3 cut(s) 253, 1064, 1172
Ama87I CYCGRG 1 cut(s) 137
Aor13HI TCCGGA 1 cut(s) 558
AoxI GGCC 1 cut(s) 93
ApeKI GCWGC 3 cut(s) 410, 622, 756
ApoI RAATTY 3 cut(s) 629, 1148, 1316
AsiGI ACCGGT 1 cut(s) 298
Asp700I GAANNNNTTC 1 cut(s) 1265
AspS9I GGNCC 3 cut(s) 94, 276, 691
AsuHPI GGTGA 3 cut(s) 65, 1109, 1409
AsuII TTCGAA 3 cut(s) 115, 212, 1461
AvaI CYCGRG 1 cut(s) 137
AvaII GGWCC 2 cut(s) 276, 691
BaeGI GKGCMC 1 cut(s) 546
BanI GGYRCC 1 cut(s) 237
BanII GRGCYC 1 cut(s) 777
BauI CACGAG 1 cut(s) 485
BbrPI CACGTG 1 cut(s) 1376
BbsI GAAGAC 1 cut(s) 63
Bbv12I GWGCWC 2 cut(s) 777, 1348
BbvI GCAGC 3 cut(s) 422, 634, 768
BccI CCATC 5 cut(s) 328, 396, 796, 1393, 1428
BcgI CGANNNNNNTGC 2 cut(s) 1451, 1485
BciT130I CCWGG 2 cut(s) 242, 823
BcoDI GTCTC 2 cut(s) 665, 1004
BfaI CTAG 3 cut(s) 434, 533, 1220
BfuAI ACCTGC 1 cut(s) 1476
BglII AGATCT 2 cut(s) 430, 1222
BisI GCNGC 3 cut(s) 411, 623, 757
BlsI GCNGC 3 cut(s) 412, 624, 758
Bme1390I CCNGG 2 cut(s) 242, 823
Bme18I GGWCC 2 cut(s) 276, 691
BmeT110I CYCGRG 1 cut(s) 137
BmgT120I GGNCC 3 cut(s) 94, 276, 691
BmiI GGNNCC 3 cut(s) 239, 360, 656
BmrFI CCNGG 2 cut(s) 242, 823
BmrI ACTGGG 1 cut(s) 1072
BmsI GCATC 1 cut(s) 598
BmuI ACTGGG 1 cut(s) 1072
BpiI GAAGAC 1 cut(s) 63
BplI GAGNNNNNCTC 2 cut(s) 764, 796
BpmI CTGGAG 2 cut(s) 805, 1362
Bpu10I CCTNAGC 2 cut(s) 41, 548
Bpu14I TTCGAA 3 cut(s) 115, 212, 1461
BpuEI CTTGAG 2 cut(s) 188, 1355
BsaAI YACGTR 2 cut(s) 1376, 1394
BsaJI CCNNGG 4 cut(s) 384, 612, 650, 822
BsaWI WCCGGW 2 cut(s) 298, 558
Bsc4I CCNNNNNNNGG 4 cut(s) 91, 700, 1043, 1129
Bse118I RCCGGY 1 cut(s) 298
Bse1I ACTGG 2 cut(s) 1018, 1078
BseAI TCCGGA 1 cut(s) 558
BseBI CCWGG 2 cut(s) 242, 823
BseDI CCNNGG 4 cut(s) 384, 612, 650, 822
BseGI GGATG 3 cut(s) 133, 407, 498
BseLI CCNNNNNNNGG 4 cut(s) 91, 700, 1043, 1129
BseMII CTCAG 4 cut(s) 32, 320, 819, 1428
BseNI ACTGG 2 cut(s) 1018, 1078
BseSI GKGCMC 1 cut(s) 546
BseXI GCAGC 3 cut(s) 422, 634, 768
BshFI GGCC 1 cut(s) 95
BshNI GGYRCC 1 cut(s) 237
BshTI ACCGGT 1 cut(s) 298
BsiHKAI GWGCWC 2 cut(s) 777, 1348
BsiHKCI CYCGRG 1 cut(s) 137
BsiSI CCGG 2 cut(s) 299, 559
BslFI GGGAC 2 cut(s) 1171, 1314
BslI CCNNNNNNNGG 4 cut(s) 91, 700, 1043, 1129
BsmAI GTCTC 2 cut(s) 665, 1004
BsmFI GGGAC 2 cut(s) 1171, 1314
BsmI GAATGC 1 cut(s) 178
BsnI GGCC 1 cut(s) 95
BsoBI CYCGRG 1 cut(s) 137
Bsp119I TTCGAA 3 cut(s) 115, 212, 1461
Bsp1286I GDGCHC 3 cut(s) 546, 777, 1348
Bsp13I TCCGGA 1 cut(s) 558
Bsp143I GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
Bsp19I CCATGG 1 cut(s) 650
BspACI CCGC 2 cut(s) 406, 897
BspANI GGCC 1 cut(s) 95
BspCNI CTCAG 4 cut(s) 33, 321, 818, 1429
BspEI TCCGGA 1 cut(s) 558
BspHI TCATGA 1 cut(s) 255
BspLI GGNNCC 3 cut(s) 239, 360, 656
BspMI ACCTGC 1 cut(s) 1476
BspPI GGATC 3 cut(s) 253, 1064, 1172
BspQI GCTCTTC 1 cut(s) 156
BspT104I TTCGAA 3 cut(s) 115, 212, 1461
BspT107I GGYRCC 1 cut(s) 237
BsrFI RCCGGY 1 cut(s) 298
BsrI ACTGG 2 cut(s) 1018, 1078
BssAI RCCGGY 1 cut(s) 298
BssECI CCNNGG 4 cut(s) 384, 612, 650, 822
BssMI GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
BssNAI GTATAC 1 cut(s) 6
BssSI CACGAG 1 cut(s) 485
BssT1I CCWWGG 1 cut(s) 650
Bst1107I GTATAC 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 485
Bst2UI CCWGG 2 cut(s) 242, 823
Bst4CI ACNGT 3 cut(s) 186, 676, 927
Bst6I CTCTTC 4 cut(s) 156, 232, 955, 963
BstBAI YACGTR 2 cut(s) 1376, 1394
BstBI TTCGAA 3 cut(s) 115, 212, 1461
BstC8I GCNNGC 3 cut(s) 408, 1204, 1245
BstDEI CTNAG 6 cut(s) 41, 329, 416, 548, 805, 1437
BstDSI CCRYGG 1 cut(s) 650
BstENI CCTNNNNNAGG 1 cut(s) 698
BstF5I GGATG 3 cut(s) 133, 407, 498
BstKTI GATC 7 cut(s) 261, 433, 708, 1059, 1167, 1225, 1362
BstMAI GTCTC 2 cut(s) 665, 1004
BstMBI GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
BstMWI GCNNNNNNNGC 3 cut(s) 434, 661, 896
BstNI CCWGG 2 cut(s) 242, 823
BstNSI RCATGY 2 cut(s) 341, 1472
BstSCI CCNGG 2 cut(s) 240, 821
BstSLI GKGCMC 1 cut(s) 546
BstV1I GCAGC 3 cut(s) 422, 634, 768
BstV2I GAAGAC 1 cut(s) 63
BstX2I RGATCY 3 cut(s) 430, 1164, 1222
BstYI RGATCY 3 cut(s) 430, 1164, 1222
BstZ17I GTATAC 1 cut(s) 6
BsuRI GGCC 1 cut(s) 95
BtgI CCRYGG 1 cut(s) 650
BtgZI GCGATG 1 cut(s) 567
BtsCI GGATG 3 cut(s) 133, 407, 498
BtsIMutI CAGTG 1 cut(s) 75
BveI ACCTGC 1 cut(s) 1476
Cac8I GCNNGC 3 cut(s) 408, 1204, 1245
CciI TCATGA 1 cut(s) 255
Cfr10I RCCGGY 1 cut(s) 298
Cfr13I GGNCC 3 cut(s) 94, 276, 691
CseI GACGC 1 cut(s) 1316
Csp6I GTAC 2 cut(s) 767, 1495
CspAI ACCGGT 1 cut(s) 298
CviQI GTAC 2 cut(s) 767, 1495
DdeI CTNAG 6 cut(s) 41, 329, 416, 548, 805, 1437
DpnI GATC 7 cut(s) 260, 432, 707, 1058, 1166, 1224, 1361
DpnII GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
DrdI GACNNNNNNGTC 1 cut(s) 251
DseDI GACNNNNNNGTC 1 cut(s) 251
Eam1104I CTCTTC 4 cut(s) 156, 232, 955, 963
EarI CTCTTC 4 cut(s) 156, 232, 955, 963
Ecl136II GAGCTC 1 cut(s) 775
Eco130I CCWWGG 1 cut(s) 650
Eco24I GRGCYC 1 cut(s) 777
Eco47I GGWCC 2 cut(s) 276, 691
Eco53kI GAGCTC 1 cut(s) 775
Eco57I CTGAAG 2 cut(s) 31, 665
Eco72I CACGTG 1 cut(s) 1376
Eco88I CYCGRG 1 cut(s) 137
EcoICRI GAGCTC 1 cut(s) 775
EcoNI CCTNNNNNAGG 1 cut(s) 698
EcoO109I RGGNCCY 2 cut(s) 276, 691
EcoRI GAATTC 1 cut(s) 1316
EcoRII CCWGG 2 cut(s) 240, 821
EcoT14I CCWWGG 1 cut(s) 650
EcoT38I GRGCYC 1 cut(s) 777
ErhI CCWWGG 1 cut(s) 650
FaqI GGGAC 2 cut(s) 1171, 1314
FauI CCCGC 1 cut(s) 399
FblI GTMKAC 1 cut(s) 5
Fnu4HI GCNGC 3 cut(s) 411, 623, 757
FokI GGATG 3 cut(s) 140, 414, 485
FriOI GRGCYC 1 cut(s) 777
Fsp4HI GCNGC 3 cut(s) 411, 623, 757
FspBI CTAG 3 cut(s) 434, 533, 1220
GluI GCNGC 3 cut(s) 411, 623, 757
GsuI CTGGAG 2 cut(s) 805, 1362
HaeIII GGCC 1 cut(s) 95
HapII CCGG 2 cut(s) 299, 559
HgaI GACGC 1 cut(s) 1316
HincII GTYRAC 2 cut(s) 592, 930
HindII GTYRAC 2 cut(s) 592, 930
HindIII AAGCTT 2 cut(s) 662, 1200
HpaI GTTAAC 1 cut(s) 592
HpaII CCGG 2 cut(s) 299, 559
HphI GGTGA 3 cut(s) 65, 1109, 1409
Hpy166II GTNNAC 4 cut(s) 6, 592, 930, 1497
Hpy188I TCNGA 7 cut(s) 50, 388, 645, 861, 1003, 1061, 1438
Hpy8I GTNNAC 4 cut(s) 6, 592, 930, 1497
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 3 cut(s) 24, 556, 1483
HpyCH4III ACNGT 3 cut(s) 186, 676, 927
HpyCH4IV ACGT 3 cut(s) 312, 1375, 1393
HpyCH4V TGCA 8 cut(s) 341, 353, 428, 473, 700, 1243, 1391, 1485
HpyF10VI GCNNNNNNNGC 3 cut(s) 434, 661, 896
HpyF3I CTNAG 6 cut(s) 41, 329, 416, 548, 805, 1437
HpySE526I ACGT 3 cut(s) 312, 1375, 1393
Kpn2I TCCGGA 1 cut(s) 558
KspAI GTTAAC 1 cut(s) 592
Kzo9I GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 2 cut(s) 660, 1343
Lsp1109I GCAGC 3 cut(s) 422, 634, 768
LweI GCATC 1 cut(s) 598
MaeI CTAG 3 cut(s) 434, 533, 1220
MaeII ACGT 3 cut(s) 312, 1375, 1393
MaeIII GTNAC 4 cut(s) 186, 294, 892, 1366
MalI GATC 7 cut(s) 260, 432, 707, 1058, 1166, 1224, 1361
MboI GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
MflI RGATCY 3 cut(s) 430, 1164, 1222
MhlI GDGCHC 3 cut(s) 546, 777, 1348
MluCI AATT 8 cut(s) 474, 507, 566, 629, 1148, 1300, 1316, 1480
MlyI GAGTC 7 cut(s) 129, 497, 634, 797, 1110, 1193, 1346
MroI TCCGGA 1 cut(s) 558
MroXI GAANNNNTTC 1 cut(s) 1265
MseI TTAA 6 cut(s) 315, 591, 666, 812, 987, 1322
MslI CAYNNNNRTG 2 cut(s) 1179, 1430
MspA1I CMGCKG 3 cut(s) 625, 899, 1312
MspI CCGG 2 cut(s) 299, 559
MspR9I CCNGG 2 cut(s) 242, 823
Mva1269I GAATGC 1 cut(s) 178
MvaI CCWGG 2 cut(s) 242, 823
MwoI GCNNNNNNNGC 3 cut(s) 434, 661, 896
NcoI CCATGG 1 cut(s) 650
NdeII GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
NlaIV GGNNCC 3 cut(s) 239, 360, 656
NmeAIII GCCGAG 1 cut(s) 637
NmuCI GTSAC 2 cut(s) 186, 1366
NspI RCATGY 2 cut(s) 341, 1472
NspV TTCGAA 3 cut(s) 115, 212, 1461
PaeR7I CTCGAG 1 cut(s) 137
PagI TCATGA 1 cut(s) 255
PaqCI CACCTGC 1 cut(s) 1476
PciSI GCTCTTC 1 cut(s) 156
PcsI WCGNNNNNNNCGW 1 cut(s) 187
PctI GAATGC 1 cut(s) 178
PdmI GAANNNNTTC 1 cut(s) 1265
PfeI GAWTC 4 cut(s) 520, 884, 1033, 1353
PinAI ACCGGT 1 cut(s) 298
PkrI GCNGC 3 cut(s) 412, 624, 758
PleI GAGTC 7 cut(s) 129, 496, 634, 797, 1109, 1192, 1345
PmaCI CACGTG 1 cut(s) 1376
PmlI CACGTG 1 cut(s) 1376
PpsI GAGTC 7 cut(s) 129, 496, 634, 797, 1109, 1192, 1345
Ppu21I YACGTR 2 cut(s) 1376, 1394
PpuMI RGGWCCY 2 cut(s) 276, 691
PsiI TTATAA 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 777
Psp5II RGGWCCY 2 cut(s) 276, 691
Psp6I CCWGG 2 cut(s) 240, 821
PspCI CACGTG 1 cut(s) 1376
PspGI CCWGG 2 cut(s) 240, 821
PspN4I GGNNCC 3 cut(s) 239, 360, 656
PspPI GGNCC 3 cut(s) 94, 276, 691
PspPPI RGGWCCY 2 cut(s) 276, 691
PsrI GAACNNNNNNTAC 2 cut(s) 819, 851
PsuI RGATCY 3 cut(s) 430, 1164, 1222
PvuII CAGCTG 2 cut(s) 625, 1312
RsaI GTAC 2 cut(s) 768, 1496
RsaNI GTAC 2 cut(s) 767, 1495
RseI CAYNNNNRTG 2 cut(s) 1179, 1430
SacI GAGCTC 1 cut(s) 777
SapI GCTCTTC 1 cut(s) 156
SaqAI TTAA 6 cut(s) 315, 591, 666, 812, 987, 1322
SatI GCNGC 3 cut(s) 411, 623, 757
Sau3AI GATC 7 cut(s) 258, 430, 705, 1056, 1164, 1222, 1359
Sau96I GGNCC 3 cut(s) 94, 276, 691
SchI GAGTC 7 cut(s) 129, 497, 634, 797, 1110, 1193, 1346
ScrFI CCNGG 2 cut(s) 242, 823
SduI GDGCHC 3 cut(s) 546, 777, 1348
SfaNI GCATC 1 cut(s) 598
Sfr274I CTCGAG 1 cut(s) 137
SfuI TTCGAA 3 cut(s) 115, 212, 1461
SinI GGWCC 2 cut(s) 276, 691
SlaI CTCGAG 1 cut(s) 137
SmiMI CAYNNNNRTG 2 cut(s) 1179, 1430
SmlI CTYRAG 3 cut(s) 137, 167, 1334
SmoI CTYRAG 3 cut(s) 137, 167, 1334
Sse9I AATT 8 cut(s) 474, 507, 566, 629, 1148, 1300, 1316, 1480
SsiI CCGC 2 cut(s) 406, 897
SspI AATATT 1 cut(s) 1387
SspMI CTAG 3 cut(s) 434, 533, 1220
SstI GAGCTC 1 cut(s) 777
StyD4I CCNGG 2 cut(s) 240, 821
StyI CCWWGG 1 cut(s) 650
TaaI ACNGT 3 cut(s) 186, 676, 927
TaiI ACGT 3 cut(s) 315, 1378, 1396
TaqI TCGA 6 cut(s) 115, 138, 181, 212, 1104, 1461
TasI AATT 8 cut(s) 474, 507, 566, 629, 1148, 1300, 1316, 1480
TfiI GAWTC 4 cut(s) 520, 884, 1033, 1353
Tru1I TTAA 6 cut(s) 315, 591, 666, 812, 987, 1322
Tru9I TTAA 6 cut(s) 315, 591, 666, 812, 987, 1322
TscAI CASTG 1 cut(s) 82
TseFI GTSAC 2 cut(s) 186, 1366
TseI GCWGC 3 cut(s) 410, 622, 756
Tsp45I GTSAC 2 cut(s) 186, 1366
TspDTI ATGAA 5 cut(s) 471, 487, 756, 981, 1395
TspRI CASTG 1 cut(s) 82
VpaK11BI GGWCC 2 cut(s) 276, 691
XagI CCTNNNNNAGG 1 cut(s) 698
XapI RAATTY 3 cut(s) 629, 1148, 1316
XceI RCATGY 2 cut(s) 341, 1472
XcmI CCANNNNNNNNNTGG 1 cut(s) 238
XhoI CTCGAG 1 cut(s) 137
XmiI GTMKAC 1 cut(s) 5
XmnI GAANNNNTTC 1 cut(s) 1265
XspI CTAG 3 cut(s) 434, 533, 1220
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.