MD07G1056600.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
5196361 .. 5199394
3034 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1056600.v1.1.491

Sequence Viewer

Length: 2838 bp
ATGGCAGGAGCTTTGATTGGAGAGGCTTTTCTCTCTGCTTCCATCCGGACGTTGGGCGACAAGATTACTTCTGGGGAGTTCATGGACTTCTTCCGGCGGAAAAAACTTGACCATTCACTCTTGGAGAAACTGAAGGTGACTTTTCTTACCCTCGATGCAGTGCTCGATGATGCAGAGGAGAAGCAGATTCAGAAACCTCGTGTGAGAAAGTGGCTCGACGAGCTCAAAAATGCCATCTTCGATGCCGAGGACCTGCTGGCTGAGATCGATACTGAAGTTTTGCGAAGCAAGGTGGAAGCTGATGAATATCAAACCAAAAAGACGTCCCAGGTGTGGAACTTCCTCTCTACTTCTTTTAATCCTTTTTGTCAAGGCATGAATGGTAGGATACAAGAGTTATTCCAAAGGTTGGAACACCTTGCGAAACAAAAAGATCTCCTTGGTCTTATAGGAGGCGTTAAGGAGAAGGTTTCTCAAAAAACTCCCACAACATCTTTTGTTGAGCATGACTTTAGTGCTTGTGGTAGGGATGGAGATAAAAAGAAGTTGAAAAGAATGTTGCTATCGGATGATGCAAGTAGCAGCCACATATCAGTAATCCCCATAGTGGGAATGGGTGGGGTCGGTAAGACAGCCCTTGCTCAGCTCCTTTACAATGATAAAAATATAAAAGAGCATTTTGATGTTACAGCTTGGGCCTGTGTTTCCGAAGATTTTGATGCTATGAGGGTAACTAAAACCCTTATTGAATCAATTATCTCAAAACCTTGCAGTCTTCAAGATAGCTTGCTTCAAGTTGAACTTAGGGAACACGTGAGGGAGAAAAAGTTCCTATTTGTGTTGGATGACCTTTGGAATGACAACTATAGTGATTGGGATCTTGTACGGGCTCCTTTTACTTATGGGGCGAGGGGAAGTAAAGTCATAGTGACAACAAGGAACAAAAGTGTCGCATCCATTGTGCACACCGGTCCTATTCACTATTTGAAACATTTGTCGCATAATGATTGTTGGTTGTTGCTCAGAAAACATGCATTTAGAAATGAAAATCCTAGTGCACATCCACACTTGGAAGAAATTGGTAAGCAAATTGCACGCAAGTGCAACGGTCTTCCTTTAGCTGCAAAAGCACTTGGGGGTCTCTTAGGTTGTAATGACTATGAATTTGAAAAGAAAAATATAATTCTACTTTGGTTGGCAGTGGGTTTAATTCCACAAGATGAGAACAGTAAAGGATTGGAAGAGCTCGGTGATAGATACTTTGATGAACTATTGTCACGATCACTACTTCAAAGATCATTAATTTGGAAATCATCAAGTTTCACAATGCATGATCTCATTAATGATTTGGCTAGATTTGTGTCTGGAGAATTTTGTTTTTGGTTGGATGAGGGAGAGTCGCATGAAGTTCCTAAAAGAGTTCGGCATTTGTCATATATGAGAGGAAGATTTGATACTGCTGCAAGATTTAAGCCATTGGATGAAATTAAGTGTTTGCGCACCTTATTTCCCGTGTCTTTAAGACCATACCATCAATGGGAGAGCCTATATGTAAGCATAAAGGTTCTAGATGATTTATTACCAGCACTAAAATGTTTACGAGTGTTGTCGCTGTCAAGATATAAAAATATCACGCAATTACCTGATAACATTGGTAAACACTTAAACTTGCGCTACATTGATCTTTCTTACACTGCAGTAAAAAAGTTACCAGATACGTTGTGTACTCTCTACAATTTGCAAACTCTATTGTTGGTCGGTTGTTCCTCTCTTGTTGAATTGCCTGCAGACATGAGGAAATTGATTAATTTGCGTCATCTTGATATTAGTGGAACTTGTATAAAAGAGATGCCGGTGCAAATGGGTAGACTAAAAAGTTTGAGAACATTGACTGCTTTTGTGTTGGGGGAATCTACTAGGTCGGGTGGCATTGGTGAACTGGGGCAATTGTCGAACCTTCGAGGAAAACTCTCTATCTTGAATCTACAAAATGTCGTCAATCCTATAGATGCCTTGGGGGCCAATTTGAAGGATAAGAAAGATCTCAACGAAGTAGAGTTGGCATGGGGTCGTGAGGAAGCAGATGATTCCATAAAAGAGAGACACGTACTTGAAAGCCTACAGCCTTCTGTGAATCTCGTGAAGCTGACCATCAGATTTTATGGTGGAACCAGCTTTCCGTATTGGTTGGGAGACTCTTCCTTCTCCAACGTACAAGTCATGCGTCTTAGTGATTGTAGTACTTGCTTCTCATTGCCACCAGTTGGGCGGTTACCCGCTCTAAGAGAGCTCTATATAGAAAGGATGAAAACTGTTGTGAGTATTGGTGTTGAGTTCTACGGGGGTAATGGAGCTTCTCTAAGTCAACCATTTCAATCTCTCAAGAAGCTAGAGTTCAAAGAGATGCCGGAGTGGGAGGAATGGCTGTCGAGTCCAGGTAGAGGTCAATCTCCAGACTTTCCTCGTCTTGAGGTGCTCATTTTAGAGAATTGTCCGAAGCTGAAGGGAAACTTGCCCGATCATCTTCCTTCATTGAGACAGCTTTGGGTGTCAGACTGCGGGGTTCTACATGAAAGGGCTACCAGAACAAGATGGATACCTTGGTCTCTCATCTTCAACACGGAGTCCTTGCGACAATCTCTTAAACAACTGAAGATAGTTAGATGCCCTGGTCTATCGTCGTTACTAGAGACGGAGTCGCTGTCCTCGCTTCGGACGCTTGAGATTCAAATTTTTAGTCGCACGGATTGCTTGCAGCCGCACTTCAGCAGTTGTCTTCAAAGTTTGAGTCTCGTTAACTGCGCGTCACTCTTGTCGTTCCCGAGAAACGGAGATTAG

Protein Analysis

946

Amino Acids

107.11

Weight (kDa)

8.2

Isoelectric Point (pI)

42.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 104 1.7e-16 Rx N-terminal domain
NB-ARC PF00931 179 - 349 1.8e-34 NB-ARC domain
WHD_DRP PF23559 385 - 451 9.1e-19 Disease resistance protein Winged helix domain
LRR_14 PF23598 527 - 850 2.4e-28 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 644 - 769 5.5e-36 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 326
Acc16I TGCGCA 1 cut(s) 1499
Acc36I ACCTGC 1 cut(s) 261
AccB7I CCANNNNNTGG 2 cut(s) 409, 2264
AccBSI CCGCTC 1 cut(s) 2279
AccI GTMKAC 1 cut(s) 1867
AccII CGCG 1 cut(s) 2804
AccIII TCCGGA 1 cut(s) 45
AciI CCGC 5 cut(s) 97, 2269, 2277, 2559, 2759
AclWI GGATC 1 cut(s) 885
AcsI RAATTY 3 cut(s) 1163, 1370, 2730
AcuI CTGAAG 5 cut(s) 152, 294, 2522, 2672, 2749
AcvI CACGTG 1 cut(s) 814
AcyI GRCGYC 1 cut(s) 323
AfaI GTAC 5 cut(s) 885, 1726, 2109, 2214, 2242
AflIII ACRYGT 2 cut(s) 811, 2104
AgeI ACCGGT 1 cut(s) 968
AjnI CCWGG 3 cut(s) 327, 2434, 2668
AleI CACNNNNGTG 1 cut(s) 1099
AloI GAACNNNNNNTCC 4 cut(s) 812, 844, 2161, 2193
Alw21I GWGCWC 7 cut(s) 165, 225, 966, 1060, 1248, 2292, 2478
Alw26I GTCTC 7 cut(s) 1145, 2095, 2187, 2530, 2610, 2684, 2795
Alw44I GTGCAC 2 cut(s) 962, 1056
AlwI GGATC 1 cut(s) 885
Ama87I CYCGRG 1 cut(s) 2821
Aor13HI TCCGGA 1 cut(s) 45
AoxI GGCC 2 cut(s) 696, 2019
ApaLI GTGCAC 2 cut(s) 962, 1056
ApeKI GCWGC 4 cut(s) 582, 1121, 1460, 2755
ApoI RAATTY 3 cut(s) 1163, 1370, 2730
ArsI GACNNNNNNTTYG 6 cut(s) 1148, 1180, 2722, 2754, 2773, 2805
AseI ATTAAT 3 cut(s) 1301, 1341, 1806
AsiGI ACCGGT 1 cut(s) 968
Asp700I GAANNNNTTC 1 cut(s) 827
AspLEI GCGC 3 cut(s) 1500, 1674, 2804
AspS9I GGNCC 4 cut(s) 250, 696, 971, 2019
AsuHPI GGTGA 3 cut(s) 148, 1262, 1946
AvaI CYCGRG 1 cut(s) 2821
AvaII GGWCC 2 cut(s) 250, 971
BaeGI GKGCMC 2 cut(s) 966, 1060
BaeI ACNNNNGTAYC 6 cut(s) 261, 294, 380, 413, 2588, 2621
BanII GRGCYC 4 cut(s) 225, 892, 1248, 2292
BarI GAAGNNNNNNTAC 4 cut(s) 1438, 1470, 2338, 2370
BauI CACGAG 2 cut(s) 198, 2138
BbrPI CACGTG 1 cut(s) 814
BbsI GAAGAC 3 cut(s) 767, 1103, 2768
Bbv12I GWGCWC 7 cut(s) 165, 225, 966, 1060, 1248, 2292, 2478
BbvI GCAGC 4 cut(s) 594, 1108, 1447, 2767
BccI CCATC 6 cut(s) 50, 242, 524, 1539, 2159, 2586
BciT130I CCWGG 3 cut(s) 329, 2436, 2670
BciVI GTATCC 2 cut(s) 381, 2589
BcoDI GTCTC 7 cut(s) 1145, 2095, 2187, 2530, 2610, 2684, 2795
BfaI CTAG 6 cut(s) 1053, 1353, 1568, 1917, 2390, 2687
BfmI CTRYAG 5 cut(s) 865, 1695, 1785, 2004, 2120
BfuAI ACCTGC 1 cut(s) 261
BfuI GTATCC 2 cut(s) 381, 2589
BglI GCCNNNNNGGC 1 cut(s) 2018
BglII AGATCT 2 cut(s) 433, 2041
BisI GCNGC 5 cut(s) 583, 1122, 1461, 2756, 2759
BlpI GCTNAGC 1 cut(s) 642
BlsI GCNGC 5 cut(s) 584, 1123, 1462, 2757, 2760
BmcAI AGTACT 1 cut(s) 2242
Bme1390I CCNGG 3 cut(s) 329, 2436, 2670
Bme18I GGWCC 2 cut(s) 250, 971
BmeT110I CYCGRG 1 cut(s) 2821
BmgT120I GGNCC 4 cut(s) 250, 696, 971, 2019
BmiI GGNNCC 3 cut(s) 891, 2020, 2170
BmrFI CCNGG 3 cut(s) 329, 2436, 2670
BmrI ACTGGG 1 cut(s) 1949
BmuI ACTGGG 1 cut(s) 1949
BpiI GAAGAC 3 cut(s) 767, 1103, 2768
BplI GAGNNNNNCTC 2 cut(s) 1953, 1985
BpmI CTGGAG 2 cut(s) 1386, 2436
Bpu1102I GCTNAGC 1 cut(s) 642
BpuEI CTTGAG 3 cut(s) 2366, 2489, 2741
Bsa29I ATCGAT 1 cut(s) 267
BsaAI YACGTR 2 cut(s) 814, 2107
BsaBI GATNNNNATC 2 cut(s) 306, 876
BsaHI GRCGYC 1 cut(s) 323
BsaI GGTCTC 2 cut(s) 1145, 2610
BsaJI CCNNGG 6 cut(s) 246, 327, 439, 2013, 2600, 2668
BsaWI WCCGGW 2 cut(s) 45, 968
BsaXI ACNNNNNCTCC 4 cut(s) 812, 842, 2687, 2717
Bse118I RCCGGY 2 cut(s) 968, 1852
Bse1I ACTGG 2 cut(s) 1944, 2261
Bse3DI GCAATG 1 cut(s) 2252
Bse8I GATNNNNATC 2 cut(s) 306, 876
BseAI TCCGGA 1 cut(s) 45
BseBI CCWGG 3 cut(s) 329, 2436, 2670
BseCI ATCGAT 1 cut(s) 267
BseDI CCNNGG 6 cut(s) 246, 327, 439, 2013, 2600, 2668
BseGI GGATG 9 cut(s) 42, 535, 574, 850, 953, 1060, 1393, 1486, 2310
BseJI GATNNNNATC 2 cut(s) 306, 876
BseMI GCAATG 1 cut(s) 2252
BseMII CTCAG 3 cut(s) 252, 656, 1036
BseNI ACTGG 2 cut(s) 1944, 2261
BseRI GAGGAG 1 cut(s) 191
BseSI GKGCMC 2 cut(s) 966, 1060
BseXI GCAGC 4 cut(s) 594, 1108, 1447, 2767
Bsh1236I CGCG 1 cut(s) 2804
BshFI GGCC 2 cut(s) 698, 2021
BshTI ACCGGT 1 cut(s) 968
BshVI ATCGAT 1 cut(s) 267
BsiHKAI GWGCWC 7 cut(s) 165, 225, 966, 1060, 1248, 2292, 2478
BsiHKCI CYCGRG 1 cut(s) 2821
BsiSI CCGG 5 cut(s) 46, 94, 969, 1853, 2408
BslFI GGGAC 1 cut(s) 310
BsmAI GTCTC 7 cut(s) 1145, 2095, 2187, 2530, 2610, 2684, 2795
BsmBI CGTCTC 1 cut(s) 2684
BsmFI GGGAC 1 cut(s) 310
BsnI GGCC 2 cut(s) 698, 2021
Bso31I GGTCTC 2 cut(s) 1145, 2610
BsoBI CYCGRG 1 cut(s) 2821
Bsp1286I GDGCHC 8 cut(s) 165, 225, 892, 966, 1060, 1248, 2292, 2478
Bsp13I TCCGGA 1 cut(s) 45
Bsp143I GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
Bsp1720I GCTNAGC 1 cut(s) 642
BspACI CCGC 5 cut(s) 97, 2269, 2277, 2559, 2759
BspANI GGCC 2 cut(s) 698, 2021
BspCNI CTCAG 3 cut(s) 253, 655, 1035
BspDI ATCGAT 1 cut(s) 267
BspEI TCCGGA 1 cut(s) 45
BspFNI CGCG 1 cut(s) 2804
BspLI GGNNCC 3 cut(s) 891, 2020, 2170
BspMAI CTGCAG 2 cut(s) 1699, 1789
BspMI ACCTGC 1 cut(s) 261
BspPI GGATC 1 cut(s) 885
BspQI GCTCTTC 1 cut(s) 1236
BspTNI GGTCTC 2 cut(s) 1145, 2610
BsrBI CCGCTC 1 cut(s) 2279
BsrDI GCAATG 1 cut(s) 2252
BsrFI RCCGGY 2 cut(s) 968, 1852
BsrI ACTGG 2 cut(s) 1944, 2261
BssAI RCCGGY 2 cut(s) 968, 1852
BssECI CCNNGG 6 cut(s) 246, 327, 439, 2013, 2600, 2668
BssMI GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
BssNI GRCGYC 1 cut(s) 323
BssSI CACGAG 2 cut(s) 198, 2138
BssT1I CCWWGG 3 cut(s) 439, 2013, 2600
Bst2BI CACGAG 2 cut(s) 198, 2138
Bst2UI CCWGG 3 cut(s) 329, 2436, 2670
Bst4CI ACNGT 3 cut(s) 1109, 1229, 2314
Bst6I CTCTTC 2 cut(s) 1236, 2203
BstACI GRCGYC 1 cut(s) 323
BstAPI GCANNNNNTGC 1 cut(s) 2748
BstBAI YACGTR 2 cut(s) 814, 2107
BstC8I GCNNGC 5 cut(s) 258, 788, 1096, 1785, 2753
BstDEI CTNAG 8 cut(s) 261, 642, 803, 1022, 1144, 2228, 2282, 2360
BstEII GGTNACC 1 cut(s) 2271
BstF5I GGATG 9 cut(s) 42, 535, 574, 850, 953, 1060, 1393, 1486, 2310
BstFNI CGCG 1 cut(s) 2804
BstHHI GCGC 3 cut(s) 1500, 1674, 2804
BstKTI GATC 9 cut(s) 267, 436, 880, 1283, 1298, 1336, 1684, 2044, 2521
BstMAI GTCTC 7 cut(s) 1145, 2095, 2187, 2530, 2610, 2684, 2795
BstMBI GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
BstMWI GCNNNNNNNGC 6 cut(s) 220, 1127, 2018, 2707, 2716, 2748
BstNI CCWGG 3 cut(s) 329, 2436, 2670
BstNSI RCATGY 1 cut(s) 1034
BstPI GGTNACC 1 cut(s) 2271
BstSCI CCNGG 3 cut(s) 327, 2434, 2668
BstSFI CTRYAG 5 cut(s) 865, 1695, 1785, 2004, 2120
BstSLI GKGCMC 2 cut(s) 966, 1060
BstUI CGCG 1 cut(s) 2804
BstV1I GCAGC 4 cut(s) 594, 1108, 1447, 2767
BstV2I GAAGAC 3 cut(s) 767, 1103, 2768
BstX2I RGATCY 3 cut(s) 433, 877, 2041
BstYI RGATCY 3 cut(s) 433, 877, 2041
Bsu15I ATCGAT 1 cut(s) 267
BsuI GTATCC 2 cut(s) 381, 2589
BsuRI GGCC 2 cut(s) 698, 2021
BsuTUI ATCGAT 1 cut(s) 267
BtsCI GGATG 9 cut(s) 42, 535, 574, 850, 953, 1060, 1393, 1486, 2310
BtsI GCAGTG 3 cut(s) 165, 1206, 1692
BtsIMutI CAGTG 3 cut(s) 165, 1206, 1692
BveI ACCTGC 1 cut(s) 261
Cac8I GCNNGC 5 cut(s) 258, 788, 1096, 1785, 2753
CfoI GCGC 3 cut(s) 1500, 1674, 2804
Cfr10I RCCGGY 2 cut(s) 968, 1852
Cfr13I GGNCC 4 cut(s) 250, 696, 971, 2019
ClaI ATCGAT 1 cut(s) 267
CseI GACGC 4 cut(s) 1802, 2213, 2725, 2793
Csp6I GTAC 5 cut(s) 884, 1725, 2108, 2213, 2241
CspAI ACCGGT 1 cut(s) 968
CviQI GTAC 5 cut(s) 884, 1725, 2108, 2213, 2241
DdeI CTNAG 8 cut(s) 261, 642, 803, 1022, 1144, 2228, 2282, 2360
DpnI GATC 9 cut(s) 266, 435, 879, 1282, 1297, 1335, 1683, 2043, 2520
DpnII GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
Eam1104I CTCTTC 2 cut(s) 1236, 2203
EarI CTCTTC 2 cut(s) 1236, 2203
EciI GGCGGA 1 cut(s) 112
Ecl136II GAGCTC 3 cut(s) 223, 1246, 2290
Eco130I CCWWGG 3 cut(s) 439, 2013, 2600
Eco24I GRGCYC 4 cut(s) 225, 892, 1248, 2292
Eco31I GGTCTC 2 cut(s) 1145, 2610
Eco47I GGWCC 2 cut(s) 250, 971
Eco53kI GAGCTC 3 cut(s) 223, 1246, 2290
Eco57I CTGAAG 5 cut(s) 152, 294, 2522, 2672, 2749
Eco72I CACGTG 1 cut(s) 814
Eco88I CYCGRG 1 cut(s) 2821
Eco91I GGTNACC 1 cut(s) 2271
EcoICRI GAGCTC 3 cut(s) 223, 1246, 2290
EcoO109I RGGNCCY 1 cut(s) 250
EcoO65I GGTNACC 1 cut(s) 2271
EcoRII CCWGG 3 cut(s) 327, 2434, 2668
EcoT14I CCWWGG 3 cut(s) 439, 2013, 2600
EcoT22I ATGCAT 2 cut(s) 1036, 1332
EcoT38I GRGCYC 4 cut(s) 225, 892, 1248, 2292
ErhI CCWWGG 3 cut(s) 439, 2013, 2600
Esp3I CGTCTC 1 cut(s) 2684
FalI AAGNNNNNCTT 6 cut(s) 423, 455, 786, 818, 2495, 2527
FaqI GGGAC 1 cut(s) 310
FauI CCCGC 2 cut(s) 2284, 2552
FblI GTMKAC 1 cut(s) 1867
Fnu4HI GCNGC 5 cut(s) 583, 1122, 1461, 2756, 2759
FokI GGATG 9 cut(s) 29, 542, 581, 857, 940, 1047, 1400, 1493, 2317
FriOI GRGCYC 4 cut(s) 225, 892, 1248, 2292
Fsp4HI GCNGC 5 cut(s) 583, 1122, 1461, 2756, 2759
FspBI CTAG 6 cut(s) 1053, 1353, 1568, 1917, 2390, 2687
FspI TGCGCA 1 cut(s) 1499
GlaI GCGC 3 cut(s) 1499, 1673, 2803
GluI GCNGC 5 cut(s) 583, 1122, 1461, 2756, 2759
GsuI CTGGAG 2 cut(s) 1386, 2436
HaeIII GGCC 2 cut(s) 698, 2021
HapII CCGG 5 cut(s) 46, 94, 969, 1853, 2408
HgaI GACGC 4 cut(s) 1802, 2213, 2725, 2793
HhaI GCGC 3 cut(s) 1500, 1674, 2804
Hin1I GRCGYC 1 cut(s) 323
Hin6I GCGC 3 cut(s) 1498, 1672, 2802
HinP1I GCGC 3 cut(s) 1498, 1672, 2802
HincII GTYRAC 2 cut(s) 2366, 2797
HindII GTYRAC 2 cut(s) 2366, 2797
HpaI GTTAAC 1 cut(s) 2797
HpaII CCGG 5 cut(s) 46, 94, 969, 1853, 2408
HphI GGTGA 3 cut(s) 148, 1262, 1946
Hpy166II GTNNAC 9 cut(s) 964, 1058, 1598, 1658, 1725, 1868, 1937, 2366, 2797
Hpy188I TCNGA 8 cut(s) 192, 568, 709, 1025, 2156, 2496, 2554, 2715
Hpy8I GTNNAC 9 cut(s) 964, 1058, 1598, 1658, 1725, 1868, 1937, 2366, 2797
Hpy99I CGWCG 2 cut(s) 221, 2683
HpyAV CCTTC 8 cut(s) 127, 460, 1967, 2023, 2136, 2212, 2497, 2538
HpyCH4III ACNGT 3 cut(s) 1109, 1229, 2314
HpyCH4IV ACGT 6 cut(s) 50, 323, 813, 1718, 2106, 2211
HpyF10VI GCNNNNNNNGC 6 cut(s) 220, 1127, 2018, 2707, 2716, 2748
HpyF3I CTNAG 8 cut(s) 261, 642, 803, 1022, 1144, 2228, 2282, 2360
HpySE526I ACGT 6 cut(s) 50, 323, 813, 1718, 2106, 2211
Hsp92I GRCGYC 1 cut(s) 323
HspAI GCGC 3 cut(s) 1498, 1672, 2802
Kpn2I TCCGGA 1 cut(s) 45
KspAI GTTAAC 1 cut(s) 2797
Kzo9I GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
LguI GCTCTTC 1 cut(s) 1236
LmnI GCTCC 4 cut(s) 8, 651, 895, 2351
Lsp1109I GCAGC 4 cut(s) 594, 1108, 1447, 2767
MaeI CTAG 6 cut(s) 1053, 1353, 1568, 1917, 2390, 2687
MaeII ACGT 6 cut(s) 50, 323, 813, 1718, 2106, 2211
MaeIII GTNAC 9 cut(s) 136, 685, 730, 928, 1275, 1707, 2271, 2682, 2805
MalI GATC 9 cut(s) 266, 435, 879, 1282, 1297, 1335, 1683, 2043, 2520
MbiI CCGCTC 1 cut(s) 2279
MboI GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
MfeI CAATTG 1 cut(s) 1946
MflI RGATCY 3 cut(s) 433, 877, 2041
MhlI GDGCHC 8 cut(s) 165, 225, 892, 966, 1060, 1248, 2292, 2478
MlyI GAGTC 6 cut(s) 1406, 2189, 2440, 2633, 2705, 2797
MmeI TCCRAC 4 cut(s) 390, 822, 1365, 2232
Mph1103I ATGCAT 2 cut(s) 1036, 1332
MroI TCCGGA 1 cut(s) 45
MroXI GAANNNNTTC 1 cut(s) 827
MslI CAYNNNNRTG 3 cut(s) 681, 1099, 1591
MspI CCGG 5 cut(s) 46, 94, 969, 1853, 2408
MspR9I CCNGG 3 cut(s) 329, 2436, 2670
MunI CAATTG 1 cut(s) 1946
MvaI CCWGG 3 cut(s) 329, 2436, 2670
MvnI CGCG 1 cut(s) 2804
MwoI GCNNNNNNNGC 6 cut(s) 220, 1127, 2018, 2707, 2716, 2748
NdeII GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
NlaIV GGNNCC 3 cut(s) 891, 2020, 2170
NmeAIII GCCGAG 1 cut(s) 271
NmuCI GTSAC 4 cut(s) 136, 928, 1275, 2805
NsbI TGCGCA 1 cut(s) 1499
NsiI ATGCAT 2 cut(s) 1036, 1332
NspI RCATGY 1 cut(s) 1034
OliI CACNNNNGTG 1 cut(s) 1099
PciSI GCTCTTC 1 cut(s) 1236
PdmI GAANNNNTTC 1 cut(s) 827
PfeI GAWTC 7 cut(s) 187, 749, 1910, 1981, 2087, 2134, 2725
PflFI GACNNNGTC 1 cut(s) 2695
PflMI CCANNNNNTGG 2 cut(s) 409, 2264
PinAI ACCGGT 1 cut(s) 968
PkrI GCNGC 5 cut(s) 584, 1123, 1462, 2757, 2760
PleI GAGTC 6 cut(s) 1405, 2189, 2439, 2632, 2704, 2796
PmaCI CACGTG 1 cut(s) 814
PmlI CACGTG 1 cut(s) 814
PpsI GAGTC 6 cut(s) 1405, 2189, 2439, 2632, 2704, 2796
Ppu21I YACGTR 2 cut(s) 814, 2107
PpuMI RGGWCCY 1 cut(s) 250
PshBI ATTAAT 3 cut(s) 1301, 1341, 1806
Psp124BI GAGCTC 3 cut(s) 225, 1248, 2292
Psp5II RGGWCCY 1 cut(s) 250
Psp6I CCWGG 3 cut(s) 327, 2434, 2668
PspCI CACGTG 1 cut(s) 814
PspEI GGTNACC 1 cut(s) 2271
PspGI CCWGG 3 cut(s) 327, 2434, 2668
PspN4I GGNNCC 3 cut(s) 891, 2020, 2170
PspPI GGNCC 4 cut(s) 250, 696, 971, 2019
PspPPI RGGWCCY 1 cut(s) 250
PstI CTGCAG 2 cut(s) 1699, 1789
PsuI RGATCY 3 cut(s) 433, 877, 2041
PsyI GACNNNGTC 1 cut(s) 2695
RsaI GTAC 5 cut(s) 885, 1726, 2109, 2214, 2242
RsaNI GTAC 5 cut(s) 884, 1725, 2108, 2213, 2241
RseI CAYNNNNRTG 3 cut(s) 681, 1099, 1591
SacI GAGCTC 3 cut(s) 225, 1248, 2292
SapI GCTCTTC 1 cut(s) 1236
SatI GCNGC 5 cut(s) 583, 1122, 1461, 2756, 2759
Sau3AI GATC 9 cut(s) 264, 433, 877, 1280, 1295, 1333, 1681, 2041, 2518
Sau96I GGNCC 4 cut(s) 250, 696, 971, 2019
ScaI AGTACT 1 cut(s) 2242
SchI GAGTC 6 cut(s) 1406, 2189, 2440, 2633, 2705, 2797
ScrFI CCNGG 3 cut(s) 329, 2436, 2670
SduI GDGCHC 8 cut(s) 165, 225, 892, 966, 1060, 1248, 2292, 2478
SfcI CTRYAG 5 cut(s) 865, 1695, 1785, 2004, 2120
SinI GGWCC 2 cut(s) 250, 971
SmiMI CAYNNNNRTG 3 cut(s) 681, 1099, 1591
SmlI CTYRAG 3 cut(s) 2381, 2468, 2720
SmoI CTYRAG 3 cut(s) 2381, 2468, 2720
SsiI CCGC 5 cut(s) 97, 2269, 2277, 2559, 2759
SspMI CTAG 6 cut(s) 1053, 1353, 1568, 1917, 2390, 2687
SstI GAGCTC 3 cut(s) 225, 1248, 2292
StyD4I CCNGG 3 cut(s) 327, 2434, 2668
StyI CCWWGG 3 cut(s) 439, 2013, 2600
TaaI ACNGT 3 cut(s) 1109, 1229, 2314
TaiI ACGT 6 cut(s) 53, 326, 816, 1721, 2109, 2214
TaqI TCGA 8 cut(s) 153, 165, 216, 240, 267, 1952, 1960, 2429
TatI WGTACW 2 cut(s) 1724, 2240
TauI GCSGC 1 cut(s) 2761
TfiI GAWTC 7 cut(s) 187, 749, 1910, 1981, 2087, 2134, 2725
TscAI CASTG 3 cut(s) 165, 1206, 1699
TseFI GTSAC 4 cut(s) 136, 928, 1275, 2805
TseI GCWGC 4 cut(s) 582, 1121, 1460, 2755
Tsp45I GTSAC 4 cut(s) 136, 928, 1275, 2805
TspGWI ACGGA 4 cut(s) 2169, 2636, 2708, 2759
TspRI CASTG 3 cut(s) 165, 1206, 1699
Tth111I GACNNNGTC 1 cut(s) 2695
Van91I CCANNNNNTGG 2 cut(s) 409, 2264
VneI GTGCAC 2 cut(s) 962, 1056
VpaK11BI GGWCC 2 cut(s) 250, 971
VspI ATTAAT 3 cut(s) 1301, 1341, 1806
XapI RAATTY 3 cut(s) 1163, 1370, 2730
XbaI TCTAGA 1 cut(s) 1567
XceI RCATGY 1 cut(s) 1034
XcmI CCANNNNNNNNNTGG 3 cut(s) 49, 610, 1533
XmiI GTMKAC 1 cut(s) 1867
XmnI GAANNNNTTC 1 cut(s) 827
XspI CTAG 6 cut(s) 1053, 1353, 1568, 1917, 2390, 2687
ZraI GACGTC 1 cut(s) 324
ZrmI AGTACT 1 cut(s) 2242
Zsp2I ATGCAT 2 cut(s) 1036, 1332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.