Rmu_sc0007060.1_g000003

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007060.1
Physical Location & Seq
Forward (+)
17099 .. 23316
6218 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007060.1_g000003.1.cds

Sequence Viewer

Length: 4695 bp
atggctctgttccgaggtcaccacaaggcctccccttccagatatactacttcttcttctggatttgcttatgacgtgttcctcagcttcagaggtgaagacacccgaaagaacttcactgatcacctccacacggcccttctcaacgcccgatttcgaacttttcgggatgaccctgaactcaaaagaggtgaaaatatcaaggaggagcttgagaaagccattcaacagtcacgaagctctgtgattgtgttttcgaaagactacacctcttccagatggtgtctggacgagcttgtcatcatccttcaacgcaagaggacctccgatcatgtcgtgttaccggtcttctaccacgttgatccatcccatctgaggaaccagactgaaagtgttgcacaagcatttactgaacaccagaaaactcaatcccctgagaagttgaatggatggcgggcagcgcttaaagaagttgcagatctagcaggcatggttttagaaaatgaagctgacgggcacgagtcaaagttcatccaaaagattgttagagagattcaagacaagctaggtcgtgtgcccctgacccatgtccaggaggtgttacagaagaagttgtcgtttattaaccctgttctcaatgacgcggaggggaagcaactgaacaacccaactgtgaaggcatggctcaatgagcttaaagaagctgtctatgatgctgaggacctgttgcaggagatcaaaacagaagcgctgaggcaaaagatagaacgcgaatatgggagtagcacgagtaaggaacaagagcatagctctactcctccatctcatgcttttgactcagctttaatataccccgaggtagaggaagttcttgaaagactagacttcattatggagcagagaagagatgtctgggatatggaagcaagtgctggatacagggtatcacaaacaataccgtcaacttctttggtagaagactctgtgtatggaagagatgaggagaaagaaggattcattaaattattgctatcagatgatgagactggcaataaaataggtgtgcttcctatcgtgggtatgggtgggatcggaaaaaccaccctcgcccagtttctatacaacgatgttagagtcaagcaacattttcacatccaagcatgggtttgcgtttcaaaagaatttgatatccttaggatcgcgcaacacatttatgagtccctcaccttaaaagcttgcaaaatcaagaacctagatctgcttcaatcagagttgcaggacactttgttggggaaaagattcttccttgttcttgatgacatctggaacaagaattatagccagttggaattcttaagacgtctctttcagtctggagcacatggaagcaagatcattgtcacaacacgcgatgaagatgttgcacgtaagatgagtaggcttgaagctcaccatctcatgccaatgtctgagcaagatagctggtcgttatttgaaaaacatgccttcaaaaatgcagatgttggtgcacgctcacgtcttgaaggaatcggtagacaaattgttcaaaagtgcaacggtcttcccttggctattaagtcacttgggggtctcttatgttctaaactatctcctgaggaatgggaaagcatattggatagtgacatctgggaattgacgcaggaggagagtgatgacattctaccatctctttggttgagctatttggatttgcctctacatctcaagcgttgttttagctactgttcgatatttcccaagaattatcgacttcaaaaatcagaactgcttttattgtggaatgcccaaggtttcttgcaaccccaaaagaagaaaatggtagaacaagttggggaagagtacttcaatgatctaatctcaaggtcatttttccaacgttcatcaagttccgaacacttcatcatgcatgaccttatcaaggatttagcaaattttgtatctggagaattttctgttaggtgggagaatagtgaatcacccaacattttgagggagactcgtcatttctcatatatggagaaacacggtgataggtttgccaaacttgaggctatacatgaagctaaatatttgcgcactcttctacctgtacctcaatatgcatcctatctggggatattcgatggagacaaattccaaaaagtactacatgaggtattgccaaaactacaatgtttaagaatgttgaatttatcattgtatgaaattatgaaattgcctgattcgattgacaacttgaaacatctaaggcacttggacatgtctgaaactcccattagaaagttacctgatagtatttgtactttgtataatttgcaagcattattgttgcggaagtgtcaaaatcttgtggaactgccaaccaagttgggacgattgatcagcttgaggcatctggatattaaagatacaaagatagaacagatgccaccacatatggccaatttcaaggacctgcagatactaaccgagtttgtgctggacaaatataccgaaggccataatgctttagagctaaagaagcttcaaaatttgcgtgggacactctgtatttcagggcttaagaatgttgtggatggcagcgctttggtagccaacattgtgagggacaaggagtttgttaccgaattaaatttgaattggaaatatacaagtaaaaaaggcgatatggtagaggaaagagaagtccttgagaagctccaacctcacctgaaactgaaagggcttacaattaaattttatggaggcaaaatgtttccaggttggtcagaatattattcttccgagtcctgtcatcttgtttatcttgaacttgttgattgtgagaattgtacctcattgccaccactgggacagctaccttacctcagagagcttcatatttctgggttacgtagagtggtgtccataggttctgaattctattatggtgacggcaatactagtagtagtgtgagaaaaccatttagatgtctacggtttttaaaattccagaatatgtcgaggtggcaagaatggtgttatgttgtaaccaaaagaaaaaatgaagaagggtgttgtgttgaaggtggagtttttcctaatcttgtggagcttgttgtatcatggtgtcgagatcttaccgggatattagcgtttgacagtttcccgatgctgaaagaggtcgacttgagtcggagtaatttatcactagactctagactcttatccgtgaataagttgcgattagaggtctgtgacactttttgtatgtataaagaaagaggtggacttgagtgtgcaacttttctcgatggggtgttgcatgcacccaacttgaccagtctagagataaatgaatgtgggaacctcattgcatggccgaaacgaatgcgctcccatctcccatctcttgtgtctttgtcggtagaaggttgccgaggattggaatgttttccggaagggggattcccgtcaaagttaaaatcacttgtcatcatgggctgtagagtggataaaaagagtgggcaaaatctgaacaagggtctccggagactcacctctcttgaaaaattgagacttgactttgcgcaggcagaatattggtttgctgcggagggggcgttgcccagcactctcactcatctcgagatctaccgtctggatggcgagaccatcgacggcgccaagtggtttggccatctcaactctcttcaacaattggtgtttggcaactgctctgcgctccggtgcttgccagatagtgggctacccacttctcttcgacaattggttatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcaacgcttgcagatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcgacaattggttatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcgacaattggttatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcgacaattggttatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcgacaattggttatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcgacaattggttatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcgacaattggttatttgcgactgctctgcgctccggtacttgccagatagtgggctacccacttctcttcaacgcttgcagattgtgcgttgtccttggcttaaggagcggtaccgaagtatgagtggcgaacattggcgcaagattgctcacatccgagaaggggaatttacccagtactctcacttatctcaggctgtacttcttaatcttaagaaaatggacatcgtcaagtggtttggacatctcaactcacttgaaactttgaagacatctcagttagaaaatattttgaggttaatttttggacctctggaacacaccgtctcagagagcgaaccagaaaggagcgttacattaatcagcaaagatacttggtctccatggcaaacgataacacatgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1564

Amino Acids

178.78

Weight (kDa)

6.71

Isoelectric Point (pI)

52.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 296
AatII GACGTC 1 cut(s) 1363
Acc16I TGCGCA 2 cut(s) 2117, 3612
Acc36I ACCTGC 1 cut(s) 2505
Acc65I GGTACC 1 cut(s) 4398
AccB1I GGYRCC 2 cut(s) 3704, 4398
AccB7I CCANNNNNTGG 9 cut(s) 3785, 3854, 3923, 3992, 4061, 4130, 4199, 4268, 4337
AccBSI CCGCTC 1 cut(s) 4396
AccI GTMKAC 3 cut(s) 1555, 3016, 3207
AccII CGCG 4 cut(s) 644, 771, 1202, 1410
AccIII TCCGGA 2 cut(s) 3478, 3570
AciI CCGC 5 cut(s) 454, 644, 2374, 3635, 4396
AclI AACGTT 1 cut(s) 1918
AclWI GGATC 3 cut(s) 356, 1097, 1205
AcoI YGGCCR 3 cut(s) 2481, 3401, 3718
AcuI CTGAAG 1 cut(s) 73
AcyI GRCGYC 2 cut(s) 1360, 3705
AfeI AGCGCT 3 cut(s) 462, 750, 2626
AflII CTTAAG 4 cut(s) 1354, 2603, 4388, 4499
AflIII ACRYGT 2 cut(s) 75, 2301
AgeI ACCGGT 1 cut(s) 343
AhlI ACTAGT 1 cut(s) 2984
AjiI CACGTC 2 cut(s) 76, 1538
AjnI CCWGG 2 cut(s) 591, 2800
Alw21I GWGCWC 2 cut(s) 1381, 1531
Alw44I GTGCAC 1 cut(s) 1527
AlwI GGATC 3 cut(s) 356, 1097, 1205
Ama87I CYCGRG 2 cut(s) 854, 3668
Aor13HI TCCGGA 2 cut(s) 3478, 3570
Aor51HI AGCGCT 3 cut(s) 462, 750, 2626
AoxI GGCC 6 cut(s) 27, 135, 2481, 2539, 3401, 3718
ApaLI GTGCAC 1 cut(s) 1527
ApeKI GCWGC 3 cut(s) 458, 2622, 3632
ArsI GACNNNNNNTTYG 2 cut(s) 2642, 2674
AseI ATTAAT 1 cut(s) 4646
AsiGI ACCGGT 1 cut(s) 343
Asp700I GAANNNNTTC 2 cut(s) 1298, 3474
Asp718I GGTACC 1 cut(s) 4398
AspS9I GGNCC 5 cut(s) 136, 321, 721, 2494, 4595
AsuC2I CCSGG 1 cut(s) 3166
AsuII TTCGAA 2 cut(s) 157, 257
AvaI CYCGRG 2 cut(s) 854, 3668
AvaII GGWCC 4 cut(s) 321, 721, 2494, 4595
AxyI CCTNAGG 2 cut(s) 1193, 1635
BaeGI GKGCMC 3 cut(s) 519, 579, 1531
BaeI ACNNNNGTAYC 2 cut(s) 4390, 4423
BalI TGGCCA 2 cut(s) 2483, 3720
BanI GGYRCC 2 cut(s) 3704, 4398
BauI CACGAG 2 cut(s) 518, 787
BbsI GAAGAC 5 cut(s) 105, 340, 984, 1574, 4562
Bbv12I GWGCWC 2 cut(s) 1381, 1531
BbvCI CCTCAGC 3 cut(s) 83, 717, 752
BbvI GCAGC 3 cut(s) 470, 2634, 3619
BceAI ACGGC 3 cut(s) 150, 2992, 3718
BciT130I CCWGG 2 cut(s) 593, 2802
BciVI GTATCC 1 cut(s) 929
BclI TGATCA 2 cut(s) 121, 2421
BcnI CCSGG 1 cut(s) 3166
BcuI ACTAGT 1 cut(s) 2984
BfaI CTAG 8 cut(s) 482, 566, 881, 1253, 2985, 3233, 3240, 3368
BfmI CTRYAG 2 cut(s) 2498, 3526
BfoI RGCGCY 4 cut(s) 464, 752, 2628, 3708
BfrI CTTAAG 4 cut(s) 1354, 2603, 4388, 4499
BfuAI ACCTGC 1 cut(s) 2505
BfuI GTATCC 1 cut(s) 929
BglII AGATCT 4 cut(s) 478, 1255, 3157, 3672
BisI GCNGC 3 cut(s) 459, 2623, 3633
BlsI GCNGC 3 cut(s) 460, 2624, 3634
BmcAI AGTACT 3 cut(s) 1883, 2187, 4466
Bme1390I CCNGG 3 cut(s) 593, 2802, 3166
Bme18I GGWCC 4 cut(s) 321, 721, 2494, 4595
BmeT110I CYCGRG 2 cut(s) 854, 3668
BmgBI CACGTC 2 cut(s) 76, 1538
BmgT120I GGNCC 5 cut(s) 136, 321, 721, 2494, 4595
BmiI GGNNCC 4 cut(s) 380, 3389, 3706, 4400
BmrFI CCNGG 3 cut(s) 593, 2802, 3166
BmrI ACTGGG 3 cut(s) 1105, 2900, 4456
BmsI GCATC 5 cut(s) 703, 2153, 2443, 2457, 3183
BmuI ACTGGG 3 cut(s) 1105, 2900, 4456
BoxI GACNNNNGTC 2 cut(s) 587, 3213
BpiI GAAGAC 5 cut(s) 105, 340, 984, 1574, 4562
BplI GAGNNNNNCTC 4 cut(s) 794, 826, 2023, 2055
BpmI CTGGAG 2 cut(s) 1395, 2004
Bpu10I CCTNAGC 3 cut(s) 83, 717, 752
Bpu14I TTCGAA 2 cut(s) 157, 257
BpuEI CTTGAG 8 cut(s) 233, 1730, 1885, 2108, 2449, 2753, 3232, 3335
BpuMI CCSGG 1 cut(s) 3166
BsaAI YACGTR 2 cut(s) 1427, 2936
BsaHI GRCGYC 2 cut(s) 1360, 3705
BsaI GGTCTC 4 cut(s) 1616, 3572, 3686, 4671
BsaJI CCNNGG 7 cut(s) 13, 855, 1587, 1828, 3460, 4382, 4670
BsaXI ACNNNNNCTCC 6 cut(s) 14, 44, 3629, 3659, 4651, 4681
Bse118I RCCGGY 1 cut(s) 343
Bse1I ACTGG 6 cut(s) 1051, 1111, 1342, 2895, 3363, 4462
Bse21I CCTNAGG 2 cut(s) 1193, 1635
Bse3DI GCAATG 2 cut(s) 2879, 3393
BseAI TCCGGA 2 cut(s) 3478, 3570
BseBI CCWGG 2 cut(s) 593, 2802
BseDI CCNNGG 7 cut(s) 13, 855, 1587, 1828, 3460, 4382, 4670
BseMI GCAATG 2 cut(s) 2879, 3393
BseNI ACTGG 6 cut(s) 1051, 1111, 1342, 2895, 3363, 4462
BseRI GAGGAG 4 cut(s) 221, 807, 1016, 1700
BseSI GKGCMC 3 cut(s) 519, 579, 1531
BseXI GCAGC 3 cut(s) 470, 2634, 3619
BseYI CCCAGC 1 cut(s) 3650
Bsh1236I CGCG 4 cut(s) 644, 771, 1202, 1410
BshFI GGCC 6 cut(s) 29, 137, 2483, 2541, 3403, 3720
BshNI GGYRCC 2 cut(s) 3704, 4398
BshTI ACCGGT 1 cut(s) 343
BsiHKAI GWGCWC 2 cut(s) 1381, 1531
BsiHKCI CYCGRG 2 cut(s) 854, 3668
BslFI GGGAC 5 cut(s) 1204, 2427, 2596, 2663, 2907
BsmBI CGTCTC 2 cut(s) 1367, 4618
BsmFI GGGAC 5 cut(s) 1204, 2427, 2596, 2663, 2907
BsmI GAATGC 2 cut(s) 1828, 3417
BsnI GGCC 6 cut(s) 29, 137, 2483, 2541, 3403, 3720
Bso31I GGTCTC 4 cut(s) 1616, 3572, 3686, 4671
BsoBI CYCGRG 2 cut(s) 854, 3668
Bsp119I TTCGAA 2 cut(s) 157, 257
Bsp1286I GDGCHC 4 cut(s) 519, 579, 1381, 1531
Bsp13I TCCGGA 2 cut(s) 3478, 3570
Bsp19I CCATGG 1 cut(s) 4670
BspACI CCGC 5 cut(s) 454, 644, 2374, 3635, 4396
BspANI GGCC 6 cut(s) 29, 137, 2483, 2541, 3403, 3720
BspEI TCCGGA 2 cut(s) 3478, 3570
BspFNI CGCG 4 cut(s) 644, 771, 1202, 1410
BspLI GGNNCC 4 cut(s) 380, 3389, 3706, 4400
BspMAI CTGCAG 1 cut(s) 2502
BspMI ACCTGC 1 cut(s) 2505
BspPI GGATC 3 cut(s) 356, 1097, 1205
BspT104I TTCGAA 2 cut(s) 157, 257
BspT107I GGYRCC 2 cut(s) 3704, 4398
BspTI CTTAAG 4 cut(s) 1354, 2603, 4388, 4499
BspTNI GGTCTC 4 cut(s) 1616, 3572, 3686, 4671
BsrBI CCGCTC 1 cut(s) 4396
BsrDI GCAATG 2 cut(s) 2879, 3393
BsrFI RCCGGY 1 cut(s) 343
BsrI ACTGG 6 cut(s) 1051, 1111, 1342, 2895, 3363, 4462
BssAI RCCGGY 1 cut(s) 343
BssECI CCNNGG 7 cut(s) 13, 855, 1587, 1828, 3460, 4382, 4670
BssNI GRCGYC 2 cut(s) 1360, 3705
BssSI CACGAG 2 cut(s) 518, 787
BssT1I CCWWGG 4 cut(s) 1587, 1828, 4382, 4670
Bst2BI CACGAG 2 cut(s) 518, 787
Bst2UI CCWGG 2 cut(s) 593, 2802
BstACI GRCGYC 2 cut(s) 1360, 3705
BstAFI CTTAAG 4 cut(s) 1354, 2603, 4388, 4499
BstAPI GCANNNNNTGC 1 cut(s) 4372
BstBAI YACGTR 2 cut(s) 1427, 2936
BstBI TTCGAA 2 cut(s) 157, 257
BstDSI CCRYGG 1 cut(s) 4670
BstEII GGTNACC 1 cut(s) 17
BstENI CCTNNNNNAGG 2 cut(s) 728, 1958
BstFNI CGCG 4 cut(s) 644, 771, 1202, 1410
BstH2I RGCGCY 4 cut(s) 464, 752, 2628, 3708
BstMWI GCNNNNNNNGC 8 cut(s) 460, 482, 691, 2563, 2633, 3641, 4372, 4393
BstNI CCWGG 2 cut(s) 593, 2802
BstNSI RCATGY 3 cut(s) 1505, 2305, 3350
BstPAI GACNNNNGTC 2 cut(s) 587, 3213
BstPI GGTNACC 1 cut(s) 17
BstSCI CCNGG 3 cut(s) 591, 2800, 3164
BstSFI CTRYAG 2 cut(s) 2498, 3526
BstSLI GKGCMC 3 cut(s) 519, 579, 1531
BstSNI TACGTA 1 cut(s) 2936
BstUI CGCG 4 cut(s) 644, 771, 1202, 1410
BstV1I GCAGC 3 cut(s) 470, 2634, 3619
BstV2I GAAGAC 5 cut(s) 105, 340, 984, 1574, 4562
BstX2I RGATCY 4 cut(s) 478, 1255, 3157, 3672
BstXI CCANNNNNNTGG 1 cut(s) 1713
BstYI RGATCY 4 cut(s) 478, 1255, 3157, 3672
Bsu36I CCTNAGG 2 cut(s) 1193, 1635
BsuI GTATCC 1 cut(s) 929
BsuRI GGCC 6 cut(s) 29, 137, 2483, 2541, 3403, 3720
BtgI CCRYGG 1 cut(s) 4670
BtgZI GCGATG 1 cut(s) 1425
BtrI CACGTC 2 cut(s) 76, 1538
BtsIMutI CAGTG 2 cut(s) 117, 2888
BveI ACCTGC 1 cut(s) 2505
Cfr10I RCCGGY 1 cut(s) 343
Cfr13I GGNCC 5 cut(s) 136, 321, 721, 2494, 4595
CseI GACGC 2 cut(s) 650, 1687
CspAI ACCGGT 1 cut(s) 343
DinI GGCGCC 1 cut(s) 3706
DraI TTTAAA 1 cut(s) 3027
DrdI GACNNNNNNGTC 1 cut(s) 296
DseDI GACNNNNNNGTC 1 cut(s) 296
EaeI YGGCCR 3 cut(s) 2481, 3401, 3718
Eco105I TACGTA 1 cut(s) 2936
Eco130I CCWWGG 4 cut(s) 1587, 1828, 4382, 4670
Eco147I AGGCCT 1 cut(s) 29
Eco31I GGTCTC 4 cut(s) 1616, 3572, 3686, 4671
Eco32I GATATC 1 cut(s) 1189
Eco47I GGWCC 4 cut(s) 321, 721, 2494, 4595
Eco47III AGCGCT 3 cut(s) 462, 750, 2626
Eco57I CTGAAG 1 cut(s) 73
Eco81I CCTNAGG 2 cut(s) 1193, 1635
Eco88I CYCGRG 2 cut(s) 854, 3668
Eco91I GGTNACC 1 cut(s) 17
EcoNI CCTNNNNNAGG 2 cut(s) 728, 1958
EcoO109I RGGNCCY 3 cut(s) 321, 721, 2494
EcoO65I GGTNACC 1 cut(s) 17
EcoRI GAATTC 2 cut(s) 1349, 2960
EcoRII CCWGG 2 cut(s) 591, 2800
EcoRV GATATC 1 cut(s) 1189
EcoT14I CCWWGG 4 cut(s) 1587, 1828, 4382, 4670
EcoT22I ATGCAT 2 cut(s) 1950, 2146
EgeI GGCGCC 1 cut(s) 3706
EheI GGCGCC 1 cut(s) 3706
ErhI CCWWGG 4 cut(s) 1587, 1828, 4382, 4670
Esp3I CGTCTC 2 cut(s) 1367, 4618
FaqI GGGAC 5 cut(s) 1204, 2427, 2596, 2663, 2907
FauI CCCGC 1 cut(s) 447
FauNDI CATATG 1 cut(s) 2478
FbaI TGATCA 2 cut(s) 121, 2421
FblI GTMKAC 3 cut(s) 1555, 3016, 3207
Fnu4HI GCNGC 3 cut(s) 459, 2623, 3633
Fsp4HI GCNGC 3 cut(s) 459, 2623, 3633
FspBI CTAG 8 cut(s) 482, 566, 881, 1253, 2985, 3233, 3240, 3368
FspI TGCGCA 2 cut(s) 2117, 3612
GluI GCNGC 3 cut(s) 459, 2623, 3633
GsaI CCCAGC 1 cut(s) 3654
GsuI CTGGAG 2 cut(s) 1395, 2004
HaeII RGCGCY 4 cut(s) 464, 752, 2628, 3708
HaeIII GGCC 6 cut(s) 29, 137, 2483, 2541, 3403, 3720
HgaI GACGC 2 cut(s) 650, 1687
Hin1I GRCGYC 2 cut(s) 1360, 3705
HincII GTYRAC 2 cut(s) 963, 3208
HindII GTYRAC 2 cut(s) 963, 3208
HindIII AAGCTT 2 cut(s) 1233, 2564
Hpy166II GTNNAC 6 cut(s) 963, 1529, 1556, 3017, 3208, 3311
Hpy8I GTNNAC 6 cut(s) 963, 1529, 1556, 3017, 3208, 3311
Hpy99I CGWCG 1 cut(s) 3704
HpyCH4IV ACGT 7 cut(s) 75, 357, 1360, 1426, 1537, 1918, 2935
HpyF10VI GCNNNNNNNGC 8 cut(s) 460, 482, 691, 2563, 2633, 3641, 4372, 4393
HpySE526I ACGT 7 cut(s) 75, 357, 1360, 1426, 1537, 1918, 2935
Hsp92I GRCGYC 2 cut(s) 1360, 3705
KasI GGCGCC 1 cut(s) 3704
Kpn2I TCCGGA 2 cut(s) 3478, 3570
KpnI GGTACC 1 cut(s) 4402
Ksp22I TGATCA 2 cut(s) 121, 2421
Lsp1109I GCAGC 3 cut(s) 470, 2634, 3619
LweI GCATC 5 cut(s) 703, 2153, 2443, 2457, 3183
MaeI CTAG 8 cut(s) 482, 566, 881, 1253, 2985, 3233, 3240, 3368
MaeII ACGT 7 cut(s) 75, 357, 1360, 1426, 1537, 1918, 2935
MbiI CCGCTC 1 cut(s) 4396
MfeI CAATTG 8 cut(s) 3740, 3809, 3947, 4016, 4085, 4154, 4223, 4292
MflI RGATCY 4 cut(s) 478, 1255, 3157, 3672
MhlI GDGCHC 4 cut(s) 519, 579, 1381, 1531
MlsI TGGCCA 2 cut(s) 2483, 3720
MluNI TGGCCA 2 cut(s) 2483, 3720
Mly113I GGCGCC 1 cut(s) 3705
MmeI TCCRAC 4 cut(s) 1326, 1939, 2767, 3197
Mox20I TGGCCA 2 cut(s) 2483, 3720
Mph1103I ATGCAT 2 cut(s) 1950, 2146
MroI TCCGGA 2 cut(s) 3478, 3570
MroXI GAANNNNTTC 2 cut(s) 1298, 3474
MscI TGGCCA 2 cut(s) 2483, 3720
MslI CAYNNNNRTG 3 cut(s) 1212, 1463, 3010
Msp20I TGGCCA 2 cut(s) 2483, 3720
MspCI CTTAAG 4 cut(s) 1354, 2603, 4388, 4499
MspR9I CCNGG 3 cut(s) 593, 2802, 3166
MunI CAATTG 8 cut(s) 3740, 3809, 3947, 4016, 4085, 4154, 4223, 4292
Mva1269I GAATGC 2 cut(s) 1828, 3417
MvaI CCWGG 2 cut(s) 593, 2802
MvnI CGCG 4 cut(s) 644, 771, 1202, 1410
MwoI GCNNNNNNNGC 8 cut(s) 460, 482, 691, 2563, 2633, 3641, 4372, 4393
NarI GGCGCC 1 cut(s) 3705
NciI CCSGG 1 cut(s) 3166
NcoI CCATGG 1 cut(s) 4670
NdeI CATATG 1 cut(s) 2478
NlaIV GGNNCC 4 cut(s) 380, 3389, 3706, 4400
NmeAIII GCCGAG 1 cut(s) 3485
NmuCI GTSAC 7 cut(s) 17, 231, 1399, 1599, 1661, 2972, 3278
NsbI TGCGCA 2 cut(s) 2117, 3612
NsiI ATGCAT 2 cut(s) 1950, 2146
NspI RCATGY 3 cut(s) 1505, 2305, 3350
NspV TTCGAA 2 cut(s) 157, 257
PaeI GCATGC 1 cut(s) 3350
PaeR7I CTCGAG 1 cut(s) 3668
PceI AGGCCT 1 cut(s) 29
PciI ACATGT 1 cut(s) 2301
PctI GAATGC 2 cut(s) 1828, 3417
PdmI GAANNNNTTC 2 cut(s) 1298, 3474
PfeI GAWTC 7 cut(s) 553, 1014, 1299, 1548, 2015, 2264, 3489
PflFI GACNNNGTC 1 cut(s) 4514
PflMI CCANNNNNTGG 9 cut(s) 3785, 3854, 3923, 3992, 4061, 4130, 4199, 4268, 4337
PfoI TCCNGGA 1 cut(s) 591
PinAI ACCGGT 1 cut(s) 343
PkrI GCNGC 3 cut(s) 460, 2624, 3634
PluTI GGCGCC 1 cut(s) 3708
Ppu21I YACGTR 2 cut(s) 1427, 2936
PpuMI RGGWCCY 3 cut(s) 321, 721, 2494
PscI ACATGT 1 cut(s) 2301
PshAI GACNNNNGTC 2 cut(s) 587, 3213
PshBI ATTAAT 1 cut(s) 4646
Psp1406I AACGTT 1 cut(s) 1918
Psp5II RGGWCCY 3 cut(s) 321, 721, 2494
Psp6I CCWGG 2 cut(s) 591, 2800
PspEI GGTNACC 1 cut(s) 17
PspFI CCCAGC 1 cut(s) 3650
PspGI CCWGG 2 cut(s) 591, 2800
PspN4I GGNNCC 4 cut(s) 380, 3389, 3706, 4400
PspPI GGNCC 5 cut(s) 136, 321, 721, 2494, 4595
PspPPI RGGWCCY 3 cut(s) 321, 721, 2494
PsrI GAACNNNNNNTAC 2 cut(s) 852, 884
PstI CTGCAG 1 cut(s) 2502
PsuI RGATCY 4 cut(s) 478, 1255, 3157, 3672
PsyI GACNNNGTC 1 cut(s) 4514
RseI CAYNNNNRTG 3 cut(s) 1212, 1463, 3010
SalI GTCGAC 1 cut(s) 3206
SatI GCNGC 3 cut(s) 459, 2623, 3633
Sau96I GGNCC 5 cut(s) 136, 321, 721, 2494, 4595
ScaI AGTACT 3 cut(s) 1883, 2187, 4466
ScrFI CCNGG 3 cut(s) 593, 2802, 3166
SduI GDGCHC 4 cut(s) 519, 579, 1381, 1531
SfaNI GCATC 5 cut(s) 703, 2153, 2443, 2457, 3183
SfcI CTRYAG 2 cut(s) 2498, 3526
SfoI GGCGCC 1 cut(s) 3706
Sfr274I CTCGAG 1 cut(s) 3668
SfuI TTCGAA 2 cut(s) 157, 257
SinI GGWCC 4 cut(s) 321, 721, 2494, 4595
SlaI CTCGAG 1 cut(s) 3668
SmiMI CAYNNNNRTG 3 cut(s) 1212, 1463, 3010
SnaBI TACGTA 1 cut(s) 2936
SpeI ACTAGT 1 cut(s) 2984
SphI GCATGC 1 cut(s) 3350
SseBI AGGCCT 1 cut(s) 29
SsiI CCGC 5 cut(s) 454, 644, 2374, 3635, 4396
SspDI GGCGCC 1 cut(s) 3704
SspI AATATT 4 cut(s) 2111, 2816, 3623, 4576
SspMI CTAG 8 cut(s) 482, 566, 881, 1253, 2985, 3233, 3240, 3368
StuI AGGCCT 1 cut(s) 29
StyD4I CCNGG 3 cut(s) 591, 2800, 3164
StyI CCWWGG 4 cut(s) 1587, 1828, 4382, 4670
TaiI ACGT 7 cut(s) 78, 360, 1363, 1429, 1540, 1921, 2938
TatI WGTACW 5 cut(s) 1881, 2185, 2342, 4464, 4486
TfiI GAWTC 7 cut(s) 553, 1014, 1299, 1548, 2015, 2264, 3489
TscAI CASTG 2 cut(s) 124, 2895
TseFI GTSAC 7 cut(s) 17, 231, 1399, 1599, 1661, 2972, 3278
TseI GCWGC 3 cut(s) 458, 2622, 3632
Tsp45I GTSAC 7 cut(s) 17, 231, 1399, 1599, 1661, 2972, 3278
TspGWI ACGGA 1 cut(s) 3241
TspRI CASTG 2 cut(s) 124, 2895
Tth111I GACNNNGTC 1 cut(s) 4514
Van91I CCANNNNNTGG 9 cut(s) 3785, 3854, 3923, 3992, 4061, 4130, 4199, 4268, 4337
Vha464I CTTAAG 4 cut(s) 1354, 2603, 4388, 4499
VneI GTGCAC 1 cut(s) 1527
VpaK11BI GGWCC 4 cut(s) 321, 721, 2494, 4595
VspI ATTAAT 1 cut(s) 4646
XagI CCTNNNNNAGG 2 cut(s) 728, 1958
XbaI TCTAGA 2 cut(s) 3239, 3367
XceI RCATGY 3 cut(s) 1505, 2305, 3350
XcmI CCANNNNNNNNNTGG 1 cut(s) 283
XhoI CTCGAG 1 cut(s) 3668
XmiI GTMKAC 3 cut(s) 1555, 3016, 3207
XmnI GAANNNNTTC 2 cut(s) 1298, 3474
XspI CTAG 8 cut(s) 482, 566, 881, 1253, 2985, 3233, 3240, 3368
ZraI GACGTC 1 cut(s) 1361
ZrmI AGTACT 3 cut(s) 1883, 2187, 4466
Zsp2I ATGCAT 2 cut(s) 1950, 2146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.