Rmu_sc0007992.1_g000002

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007992.1
Physical Location & Seq
Reverse (-)
5974 .. 10142
4169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007992.1_g000002.1.cds

Sequence Viewer

Length: 3360 bp
atggctgaagttgtgggtggagcttttctctcttctgctcttgctgttctgtttgataggatggcttcccgtccggttcttgacttcatccgaggaaagaagaccaccgaggggctgctcgataagttgaagattaagttgttgttggttaataactttctcgatggtgcagaggagaagcaactcagaaactctggagtcagggaatggcttaatgagcttaaagatgttctctttcatgccgatgacctgttggatgacatcaagactgaagctctccgttgcaagatggaacaagaagattctggaagcagcagcataaatcaggtgttaaggagactcaagtttagttctatttccattcataaatttgagaaaagtctggaacccaggatacggtatattcttgaaagactacaatctgttgtggacggaaaagatgtgcttgatttgaaagaaggtgttaaggagagatcacaaggaagactgcctacaacttctttggtagaagagtctggtgtatatggaagggatggagtaaaggaggacattatcaagttattgttagcggatggtatggttggaaataaaatagatgtgcttccaattgtgggcatgggtggggttggaaagaccactcttgctcaactcgtatacaaagatgacagagtcaagcaacattttaaccatcagtcatggttttgtgtttcggaagaatttgatgtcaccgaattaacacagtatatttacaggtcagtgacttcagatgtttgtaatatcacagaccttgacatgcttcaagttaaactacagacgacattgacagggaagaaatttctctttgttcttgatgatgtttggactatgactaatgacgagtgggatctcttaagccgaccctttgagagtggaggtcatggaagtaagatcattgtcacaacacgtgatgaaggtgtcgcaggcattatgggtacccttcaaagtcaacatctaacgccaatatctgaggaagactgctggtcgttgttctcaaaacatgccttcaagaatgcaggtgttaccgcagatccgtcgcttgaagtgattggaagacagattgttcaaaagtgtaaaggactccctttagctgcaaaatcacttgggggtctgttactttctgaaccaaatattgagaaatgggaagaagtattgaacactggcatatgggagttgctagataaaaagaatggcattttgccagctctatggttgagctaccatcatctacctccgcatctgaagcgttgttttgcttactgttccatatttcctcaagattatccgtttcacaaaccggatctggttttgttgtggatggctgaagatctcttaccgtcgaattcgaagactagatttgaacaagttggagagaactactttgatgatctcgtgtcaaggtcattttttcaacatgtaccgaatcactattctggtaaggcagttttcacaatgcatgaccttatccatgacttggcaaactttgtctctgacgagttttgtgttaggtttgagaacaatgactcagtactggcaaatgtcagcaagagtcgccacttttcgtgtcgaactgtcagttttgatcaatggcacagtttgtatgaagccaagcatttgaggacctttatagtgtcaagttgttacaacaggaaaggttttgatatattcctgaagcttcggtgtttaagagtgctcaagttatctgggtactataatcgtgagctgcctagttcaattagcaagttgaagcatctgaggcacgttgacttgtcttactcgtttattggaaagttacctgatgcaatgtgtactttatacaatttgcagacgttattgttgcggtattgtcgaaatctagttaagttgccaactgattttggaagattaatcaacttgcgtcatcttgatattagagacacaaatataaaaaagatgcccccaaggatgggtaaaatgaaagatctccaaacattaagaggtaagtttgtcctagacaaatacactggtgataacattgtggagattaaagagcttcagcagttgcgcggaacactttttatctcggggcttcgcaatattgtgcgtgtcccagatgccattatgagaaagaagcatgtagatgaattagttttggaatggggaggcgagtctggtgacaccggcgatacacaaaaagagagagatgtgctggagaacctccaacctcatacaaacctaaaaaaactcgagattcgatcttatggcggcacgagatttccaggttggttggaagatctttctagtttatctaatctggttcgtcttcaacttctggattgtggaaattgtttgtccttgccatcagttgagcagctaccctccctccaagagcttgagattgaaggatttaatggagtggtgactgtgggttctaagccttttcctaatcttcgtgagcttggtctgaaatcttgtcccgaggtaaccggggcattcatgttagcctgcttcccaaagcttgaaagtctcgaattgaaggatgtgaatgtagaatctcttcattccactacactcctctcccttgtcaaactcagaatatcttcatgcccaaattttgttggttttcgagatggagcgctggatgcgcccaacttggagaccatcatagtcgataaatgtccagaattggaatcatttcccgaagggggattgccgtctaagttggaaaacttgtacatccgttcttgcaagaaactcctcattggaaacgcccgtatgcagtggggtctaccaacactcacctctctcaaaatcttgtgggtcgactttgagggatgtgaacaagttgtagattcatttccagacgaggggctgctacccaccactctcggagaactctgcatctgcagtatttcgaagctggacggcaaggggtttacacaactcacctctcttaaccggttgataattcgtgattgccctgaactccggtgcttgccagatgagggattgcccacttctcttacttatctgtccatccgtaattgtcctttactagaacaacgttgccagagagagacaggggaagattggcccaagattgctcacatcaaggaaatattcatcaatggttctgaattagtagtgctatcacgtgagtacaagactgtgtccagaggaatggttgccaatgtatacaggattttgttttctacaaaacgacgaagagcgtttgcatatatgaagtatgcaattgcaggtggctctagtacttttagcaccaacttcattgttgcctcgtggttccctagtttattcggttactatccagtttggagcctctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1119

Amino Acids

126.82

Weight (kDa)

6.81

Isoelectric Point (pI)

41.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1043, 3263
Acc36I ACCTGC 2 cut(s) 1043, 3263
Acc65I GGTACC 1 cut(s) 971
AccB1I GGYRCC 1 cut(s) 971
AccB7I CCANNNNNTGG 1 cut(s) 1510
AccI GTMKAC 4 cut(s) 654, 2803, 2838, 3210
AccII CGCG 1 cut(s) 2082
AciI CCGC 6 cut(s) 569, 1062, 1271, 1876, 2082, 2280
AclI AACGTT 1 cut(s) 3079
AclWI GGATC 3 cut(s) 891, 1061, 1344
AcsI RAATTY 5 cut(s) 368, 716, 833, 1378, 2626
AcuI CTGAAG 7 cut(s) 27, 291, 747, 1298, 1380, 1727, 2054
AcvI CACGTG 2 cut(s) 944, 3170
AfaI GTAC 8 cut(s) 973, 1455, 1566, 1745, 1846, 2750, 3176, 3286
AfeI AGCGCT 1 cut(s) 2652
AfiI CCNNNNNNNGG 9 cut(s) 111, 396, 611, 1510, 1981, 1982, 2720, 2882, 3020
AflII CTTAAG 1 cut(s) 889
AflIII ACRYGT 2 cut(s) 941, 1450
AgeI ACCGGT 1 cut(s) 2973
AhdI GACNNNNNGTC 1 cut(s) 1018
AjnI CCWGG 2 cut(s) 389, 2293
Alw21I GWGCWC 1 cut(s) 1731
Alw26I GTCTC 6 cut(s) 331, 1528, 1944, 2546, 2666, 3086
AlwI GGATC 3 cut(s) 891, 1061, 1344
Ama87I CYCGRG 3 cut(s) 2098, 2261, 2492
Aor51HI AGCGCT 1 cut(s) 2652
AoxI GGCC 1 cut(s) 3107
ApeKI GCWGC 7 cut(s) 115, 312, 315, 1127, 1759, 2386, 2887
ApoI RAATTY 5 cut(s) 368, 716, 833, 1378, 2626
AseI ATTAAT 1 cut(s) 1922
AsiGI ACCGGT 1 cut(s) 2973
Asp700I GAANNNNTTC 3 cut(s) 2571, 2614, 2709
Asp718I GGTACC 1 cut(s) 971
AspLEI GCGC 3 cut(s) 2082, 2653, 2662
AspS9I GGNCC 2 cut(s) 1656, 3108
AsuC2I CCSGG 1 cut(s) 2503
AsuHPI GGTGA 6 cut(s) 718, 2054, 2201, 2446, 2806, 2953
AsuII TTCGAA 2 cut(s) 1382, 2930
AvaI CYCGRG 3 cut(s) 2098, 2261, 2492
AvaII GGWCC 1 cut(s) 1656
BanI GGYRCC 1 cut(s) 971
BarI GAAGNNNNNNTAC 6 cut(s) 475, 507, 1353, 1385, 2556, 2588
BauI CACGAG 3 cut(s) 1427, 2284, 3313
BbrPI CACGTG 2 cut(s) 944, 3170
BbsI GAAGAC 6 cut(s) 107, 490, 1017, 1096, 1391, 2330
Bbv12I GWGCWC 1 cut(s) 1731
BbvI GCAGC 7 cut(s) 102, 324, 327, 1114, 1746, 2398, 2874
BceAI ACGGC 2 cut(s) 2713, 2956
BcgI CGANNNNNNTGC 2 cut(s) 1053, 1087
BciT130I CCWGG 2 cut(s) 391, 2295
BciVI GTATCC 1 cut(s) 387
BclI TGATCA 1 cut(s) 1618
BcnI CCSGG 1 cut(s) 2503
BcoDI GTCTC 6 cut(s) 331, 1528, 1944, 2546, 2666, 3086
BfaI CTAG 9 cut(s) 1214, 1389, 1764, 1892, 2027, 2316, 3071, 3282, 3324
BfmI CTRYAG 2 cut(s) 809, 2920
BfoI RGCGCY 1 cut(s) 2654
BfrI CTTAAG 1 cut(s) 889
BfuAI ACCTGC 2 cut(s) 1043, 3263
BfuI GTATCC 1 cut(s) 387
BglII AGATCT 3 cut(s) 1363, 1996, 2308
BisI GCNGC 8 cut(s) 116, 313, 316, 1128, 1760, 2281, 2387, 2888
BlsI GCNGC 8 cut(s) 117, 314, 317, 1129, 1761, 2282, 2388, 2889
BmcAI AGTACT 2 cut(s) 1566, 3286
Bme1390I CCNGG 3 cut(s) 391, 2295, 2503
Bme18I GGWCC 1 cut(s) 1656
BmeRI GACNNNNNGTC 1 cut(s) 1018
BmeT110I CYCGRG 3 cut(s) 2098, 2261, 2492
BmgT120I GGNCC 2 cut(s) 1656, 3108
BmiI GGNNCC 4 cut(s) 387, 973, 3320, 3353
BmrFI CCNGG 3 cut(s) 391, 2295, 2503
BmsI GCATC 7 cut(s) 1282, 1795, 1825, 1959, 2119, 2647, 2925
BpiI GAAGAC 6 cut(s) 107, 490, 1017, 1096, 1391, 2330
BplI GAGNNNNNCTC 2 cut(s) 12, 44
BpmI CTGGAG 2 cut(s) 216, 2246
Bpu14I TTCGAA 2 cut(s) 1382, 2930
BpuEI CTTGAG 4 cut(s) 326, 1296, 1715, 2429
BpuMI CCSGG 1 cut(s) 2503
BsaAI YACGTR 2 cut(s) 944, 3170
BsaI GGTCTC 1 cut(s) 2666
BsaJI CCNNGG 6 cut(s) 91, 108, 389, 1976, 2493, 2502
BsaWI WCCGGW 4 cut(s) 73, 1333, 2973, 3003
BsaXI ACNNNNNCTCC 2 cut(s) 2382, 2412
Bsc4I CCNNNNNNNGG 9 cut(s) 111, 396, 611, 1510, 1981, 1982, 2720, 2882, 3020
Bse118I RCCGGY 2 cut(s) 2195, 2973
Bse1I ACTGG 4 cut(s) 1201, 1572, 2044, 3344
Bse3DI GCAATG 1 cut(s) 1845
BseBI CCWGG 2 cut(s) 391, 2295
BseDI CCNNGG 6 cut(s) 91, 108, 389, 1976, 2493, 2502
BseLI CCNNNNNNNGG 9 cut(s) 111, 396, 611, 1510, 1981, 1982, 2720, 2882, 3020
BseMI GCAATG 1 cut(s) 1845
BseMII CTCAG 5 cut(s) 199, 996, 1575, 1781, 2620
BseNI ACTGG 4 cut(s) 1201, 1572, 2044, 3344
BseRI GAGGAG 3 cut(s) 188, 2579, 2762
BseXI GCAGC 7 cut(s) 102, 324, 327, 1114, 1746, 2398, 2874
BsgI GTGCAG 1 cut(s) 189
Bsh1236I CGCG 1 cut(s) 2082
BshFI GGCC 1 cut(s) 3109
BshNI GGYRCC 1 cut(s) 971
BshTI ACCGGT 1 cut(s) 2973
BsiHKAI GWGCWC 1 cut(s) 1731
BsiHKCI CYCGRG 3 cut(s) 2098, 2261, 2492
BsiSI CCGG 6 cut(s) 74, 1334, 2196, 2502, 2974, 3004
BslFI GGGAC 2 cut(s) 2108, 2475
BslI CCNNNNNNNGG 9 cut(s) 111, 396, 611, 1510, 1981, 1982, 2720, 2882, 3020
BsmAI GTCTC 6 cut(s) 331, 1528, 1944, 2546, 2666, 3086
BsmFI GGGAC 2 cut(s) 2108, 2475
BsmI GAATGC 2 cut(s) 1054, 2507
BsnI GGCC 1 cut(s) 3109
Bso31I GGTCTC 1 cut(s) 2666
BsoBI CYCGRG 3 cut(s) 2098, 2261, 2492
Bsp119I TTCGAA 2 cut(s) 1382, 2930
Bsp1286I GDGCHC 1 cut(s) 1731
Bsp1407I TGTACA 1 cut(s) 2748
BspACI CCGC 6 cut(s) 569, 1062, 1271, 1876, 2082, 2280
BspANI GGCC 1 cut(s) 3109
BspCNI CTCAG 5 cut(s) 198, 997, 1574, 1782, 2619
BspFNI CGCG 1 cut(s) 2082
BspLI GGNNCC 4 cut(s) 387, 973, 3320, 3353
BspMAI CTGCAG 1 cut(s) 2924
BspMI ACCTGC 2 cut(s) 1043, 3263
BspPI GGATC 3 cut(s) 891, 1061, 1344
BspQI GCTCTTC 1 cut(s) 3235
BspT104I TTCGAA 2 cut(s) 1382, 2930
BspT107I GGYRCC 1 cut(s) 971
BspTI CTTAAG 1 cut(s) 889
BspTNI GGTCTC 1 cut(s) 2666
BsrDI GCAATG 1 cut(s) 1845
BsrFI RCCGGY 2 cut(s) 2195, 2973
BsrGI TGTACA 1 cut(s) 2748
BsrI ACTGG 4 cut(s) 1201, 1572, 2044, 3344
BssAI RCCGGY 2 cut(s) 2195, 2973
BssECI CCNNGG 6 cut(s) 91, 108, 389, 1976, 2493, 2502
BssNAI GTATAC 2 cut(s) 655, 3211
BssSI CACGAG 3 cut(s) 1427, 2284, 3313
BssT1I CCWWGG 1 cut(s) 1976
Bst1107I GTATAC 2 cut(s) 655, 3211
Bst2BI CACGAG 3 cut(s) 1427, 2284, 3313
Bst2UI CCWGG 2 cut(s) 391, 2295
Bst4CI ACNGT 8 cut(s) 399, 741, 1298, 1374, 1609, 1631, 2440, 3184
Bst6I CTCTTC 4 cut(s) 37, 504, 2577, 3235
BstAFI CTTAAG 1 cut(s) 889
BstAUI TGTACA 1 cut(s) 2748
BstBAI YACGTR 2 cut(s) 944, 3170
BstBI TTCGAA 2 cut(s) 1382, 2930
BstC8I GCNNGC 4 cut(s) 961, 1239, 2521, 3011
BstDEI CTNAG 7 cut(s) 185, 1005, 1561, 1790, 2448, 2606, 2733
BstEII GGTNACC 1 cut(s) 2497
BstFNI CGCG 1 cut(s) 2082
BstH2I RGCGCY 1 cut(s) 2654
BstHHI GCGC 3 cut(s) 2082, 2653, 2662
BstMAI GTCTC 6 cut(s) 331, 1528, 1944, 2546, 2666, 3086
BstMWI GCNNNNNNNGC 6 cut(s) 217, 1279, 1587, 1792, 2657, 2659
BstNI CCWGG 2 cut(s) 391, 2295
BstNSI RCATGY 4 cut(s) 796, 1040, 1454, 2153
BstPI GGTNACC 1 cut(s) 2497
BstSCI CCNGG 3 cut(s) 389, 2293, 2501
BstSFI CTRYAG 2 cut(s) 809, 2920
BstUI CGCG 1 cut(s) 2082
BstV1I GCAGC 7 cut(s) 102, 324, 327, 1114, 1746, 2398, 2874
BstV2I GAAGAC 6 cut(s) 107, 490, 1017, 1096, 1391, 2330
BstX2I RGATCY 6 cut(s) 883, 1066, 1336, 1363, 1996, 2308
BstXI CCANNNNNNTGG 2 cut(s) 1245, 3196
BstYI RGATCY 6 cut(s) 883, 1066, 1336, 1363, 1996, 2308
BstZ17I GTATAC 2 cut(s) 655, 3211
BsuI GTATCC 1 cut(s) 387
BsuRI GGCC 1 cut(s) 3109
BtsI GCAGTG 1 cut(s) 2801
BtsIMutI CAGTG 4 cut(s) 762, 1194, 2037, 2801
BveI ACCTGC 2 cut(s) 1043, 3263
Cac8I GCNNGC 4 cut(s) 961, 1239, 2521, 3011
CfoI GCGC 3 cut(s) 2082, 2653, 2662
Cfr10I RCCGGY 2 cut(s) 2195, 2973
Cfr13I GGNCC 2 cut(s) 1656, 3108
CseI GACGC 1 cut(s) 1922
Csp6I GTAC 8 cut(s) 972, 1454, 1565, 1744, 1845, 2749, 3175, 3285
CspAI ACCGGT 1 cut(s) 2973
CviQI GTAC 8 cut(s) 972, 1454, 1565, 1744, 1845, 2749, 3175, 3285
DdeI CTNAG 7 cut(s) 185, 1005, 1561, 1790, 2448, 2606, 2733
DriI GACNNNNNGTC 1 cut(s) 1018
Eam1104I CTCTTC 4 cut(s) 37, 504, 2577, 3235
Eam1105I GACNNNNNGTC 1 cut(s) 1018
EarI CTCTTC 4 cut(s) 37, 504, 2577, 3235
Eco130I CCWWGG 1 cut(s) 1976
Eco31I GGTCTC 1 cut(s) 2666
Eco47I GGWCC 1 cut(s) 1656
Eco47III AGCGCT 1 cut(s) 2652
Eco57I CTGAAG 7 cut(s) 27, 291, 747, 1298, 1380, 1727, 2054
Eco72I CACGTG 2 cut(s) 944, 3170
Eco88I CYCGRG 3 cut(s) 2098, 2261, 2492
Eco91I GGTNACC 1 cut(s) 2497
EcoO109I RGGNCCY 1 cut(s) 1656
EcoO65I GGTNACC 1 cut(s) 2497
EcoRI GAATTC 1 cut(s) 1378
EcoRII CCWGG 2 cut(s) 389, 2293
EcoT14I CCWWGG 1 cut(s) 1976
EcoT22I ATGCAT 1 cut(s) 1494
ErhI CCWWGG 1 cut(s) 1976
FalI AAGNNNNNCTT 2 cut(s) 429, 461
FaqI GGGAC 2 cut(s) 2108, 2475
FauNDI CATATG 1 cut(s) 1202
FbaI TGATCA 1 cut(s) 1618
FblI GTMKAC 4 cut(s) 654, 2803, 2838, 3210
Fnu4HI GCNGC 8 cut(s) 116, 313, 316, 1128, 1760, 2281, 2387, 2888
Fsp4HI GCNGC 8 cut(s) 116, 313, 316, 1128, 1760, 2281, 2387, 2888
FspBI CTAG 9 cut(s) 1214, 1389, 1764, 1892, 2027, 2316, 3071, 3282, 3324
GlaI GCGC 3 cut(s) 2081, 2652, 2661
GluI GCNGC 8 cut(s) 116, 313, 316, 1128, 1760, 2281, 2387, 2888
GsuI CTGGAG 2 cut(s) 216, 2246
HaeII RGCGCY 1 cut(s) 2654
HaeIII GGCC 1 cut(s) 3109
HapII CCGG 6 cut(s) 74, 1334, 2196, 2502, 2974, 3004
HgaI GACGC 1 cut(s) 1922
HhaI GCGC 3 cut(s) 2082, 2653, 2662
Hin6I GCGC 3 cut(s) 2080, 2651, 2660
HinP1I GCGC 3 cut(s) 2080, 2651, 2660
HincII GTYRAC 3 cut(s) 986, 1801, 2839
HindII GTYRAC 3 cut(s) 986, 1801, 2839
HindIII AAGCTT 2 cut(s) 1709, 2531
HpaII CCGG 6 cut(s) 74, 1334, 2196, 2502, 2974, 3004
HphI GGTGA 6 cut(s) 718, 2054, 2201, 2446, 2806, 2953
Hpy99I CGWCG 3 cut(s) 1075, 1378, 3240
HpyAV CCTTC 8 cut(s) 452, 522, 944, 986, 1051, 2411, 2545, 2711
HpyCH4III ACNGT 8 cut(s) 399, 741, 1298, 1374, 1609, 1631, 2440, 3184
HpyCH4IV ACGT 5 cut(s) 943, 1797, 1865, 3079, 3169
HpyF10VI GCNNNNNNNGC 6 cut(s) 217, 1279, 1587, 1792, 2657, 2659
HpyF3I CTNAG 7 cut(s) 185, 1005, 1561, 1790, 2448, 2606, 2733
HpySE526I ACGT 5 cut(s) 943, 1797, 1865, 3079, 3169
HspAI GCGC 3 cut(s) 2080, 2651, 2660
KpnI GGTACC 1 cut(s) 975
Ksp22I TGATCA 1 cut(s) 1618
LguI GCTCTTC 1 cut(s) 3235
LmnI GCTCC 3 cut(s) 20, 2648, 3351
Lsp1109I GCAGC 7 cut(s) 102, 324, 327, 1114, 1746, 2398, 2874
LweI GCATC 7 cut(s) 1282, 1795, 1825, 1959, 2119, 2647, 2925
MaeI CTAG 9 cut(s) 1214, 1389, 1764, 1892, 2027, 2316, 3071, 3282, 3324
MaeII ACGT 5 cut(s) 943, 1797, 1865, 3079, 3169
MfeI CAATTG 2 cut(s) 606, 3267
MflI RGATCY 6 cut(s) 883, 1066, 1336, 1363, 1996, 2308
MhlI GDGCHC 1 cut(s) 1731
MlyI GAGTC 8 cut(s) 207, 333, 521, 678, 1110, 1553, 1594, 2192
MmeI TCCRAC 7 cut(s) 234, 562, 607, 1384, 2260, 2283, 2718
Mph1103I ATGCAT 1 cut(s) 1494
MroXI GAANNNNTTC 3 cut(s) 2571, 2614, 2709
MslI CAYNNNNRTG 2 cut(s) 243, 2154
MspCI CTTAAG 1 cut(s) 889
MspI CCGG 6 cut(s) 74, 1334, 2196, 2502, 2974, 3004
MspR9I CCNGG 3 cut(s) 391, 2295, 2503
MunI CAATTG 2 cut(s) 606, 3267
Mva1269I GAATGC 2 cut(s) 1054, 2507
MvaI CCWGG 2 cut(s) 391, 2295
MvnI CGCG 1 cut(s) 2082
MwoI GCNNNNNNNGC 6 cut(s) 217, 1279, 1587, 1792, 2657, 2659
NciI CCSGG 1 cut(s) 2503
NdeI CATATG 1 cut(s) 1202
NlaIV GGNNCC 4 cut(s) 387, 973, 3320, 3353
NmuCI GTSAC 5 cut(s) 724, 757, 934, 2189, 2434
NsiI ATGCAT 1 cut(s) 1494
NspI RCATGY 4 cut(s) 796, 1040, 1454, 2153
NspV TTCGAA 2 cut(s) 1382, 2930
PaeR7I CTCGAG 1 cut(s) 2261
PaqCI CACCTGC 2 cut(s) 1043, 3263
PciI ACATGT 1 cut(s) 1450
PciSI GCTCTTC 1 cut(s) 3235
PctI GAATGC 2 cut(s) 1054, 2507
PdmI GAANNNNTTC 3 cut(s) 2571, 2614, 2709
PfeI GAWTC 6 cut(s) 302, 1459, 2266, 2567, 2705, 2867
PflFI GACNNNGTC 2 cut(s) 668, 3184
PflMI CCANNNNNTGG 1 cut(s) 1510
PinAI ACCGGT 1 cut(s) 2973
PkrI GCNGC 8 cut(s) 117, 314, 317, 1129, 1761, 2282, 2388, 2889
PleI GAGTC 8 cut(s) 206, 333, 520, 677, 1110, 1553, 1593, 2191
PmaCI CACGTG 2 cut(s) 944, 3170
PmlI CACGTG 2 cut(s) 944, 3170
PpsI GAGTC 8 cut(s) 206, 333, 520, 677, 1110, 1553, 1593, 2191
Ppu21I YACGTR 2 cut(s) 944, 3170
PpuMI RGGWCCY 1 cut(s) 1656
PscI ACATGT 1 cut(s) 1450
PshBI ATTAAT 1 cut(s) 1922
Psp1406I AACGTT 1 cut(s) 3079
Psp5II RGGWCCY 1 cut(s) 1656
Psp6I CCWGG 2 cut(s) 389, 2293
PspCI CACGTG 2 cut(s) 944, 3170
PspEI GGTNACC 1 cut(s) 2497
PspGI CCWGG 2 cut(s) 389, 2293
PspN4I GGNNCC 4 cut(s) 387, 973, 3320, 3353
PspPI GGNCC 2 cut(s) 1656, 3108
PspPPI RGGWCCY 1 cut(s) 1656
PsrI GAACNNNNNNTAC 2 cut(s) 378, 410
PstI CTGCAG 1 cut(s) 2924
PsuI RGATCY 6 cut(s) 883, 1066, 1336, 1363, 1996, 2308
PsyI GACNNNGTC 2 cut(s) 668, 3184
RsaI GTAC 8 cut(s) 973, 1455, 1566, 1745, 1846, 2750, 3176, 3286
RsaNI GTAC 8 cut(s) 972, 1454, 1565, 1744, 1845, 2749, 3175, 3285
RseI CAYNNNNRTG 2 cut(s) 243, 2154
SalI GTCGAC 1 cut(s) 2837
SapI GCTCTTC 1 cut(s) 3235
SatI GCNGC 8 cut(s) 116, 313, 316, 1128, 1760, 2281, 2387, 2888
Sau96I GGNCC 2 cut(s) 1656, 3108
ScaI AGTACT 2 cut(s) 1566, 3286
SchI GAGTC 8 cut(s) 207, 333, 521, 678, 1110, 1553, 1594, 2192
ScrFI CCNGG 3 cut(s) 391, 2295, 2503
SduI GDGCHC 1 cut(s) 1731
SfaNI GCATC 7 cut(s) 1282, 1795, 1825, 1959, 2119, 2647, 2925
SfcI CTRYAG 2 cut(s) 809, 2920
Sfr274I CTCGAG 1 cut(s) 2261
SfuI TTCGAA 2 cut(s) 1382, 2930
SgrAI CRCCGGYG 1 cut(s) 2195
SinI GGWCC 1 cut(s) 1656
SlaI CTCGAG 1 cut(s) 2261
SmiMI CAYNNNNRTG 2 cut(s) 243, 2154
SmlI CTYRAG 6 cut(s) 341, 889, 1311, 1730, 2261, 2408
SmoI CTYRAG 6 cut(s) 341, 889, 1311, 1730, 2261, 2408
SsiI CCGC 6 cut(s) 569, 1062, 1271, 1876, 2082, 2280
SspI AATATT 3 cut(s) 1168, 2113, 3135
SspMI CTAG 9 cut(s) 1214, 1389, 1764, 1892, 2027, 2316, 3071, 3282, 3324
StyD4I CCNGG 3 cut(s) 389, 2293, 2501
StyI CCWWGG 1 cut(s) 1976
TaaI ACNGT 8 cut(s) 399, 741, 1298, 1374, 1609, 1631, 2440, 3184
TaiI ACGT 5 cut(s) 946, 1800, 1868, 3082, 3172
TatI WGTACW 5 cut(s) 1564, 1844, 2748, 3174, 3284
TauI GCSGC 1 cut(s) 2283
TfiI GAWTC 6 cut(s) 302, 1459, 2266, 2567, 2705, 2867
TscAI CASTG 4 cut(s) 762, 1201, 2044, 2801
TseFI GTSAC 5 cut(s) 724, 757, 934, 2189, 2434
TseI GCWGC 7 cut(s) 115, 312, 315, 1127, 1759, 2386, 2887
Tsp45I GTSAC 5 cut(s) 724, 757, 934, 2189, 2434
TspGWI ACGGA 6 cut(s) 269, 447, 1059, 1311, 2744, 3044
TspRI CASTG 4 cut(s) 762, 1201, 2044, 2801
Tth111I GACNNNGTC 2 cut(s) 668, 3184
Van91I CCANNNNNTGG 1 cut(s) 1510
Vha464I CTTAAG 1 cut(s) 889
VpaK11BI GGWCC 1 cut(s) 1656
VspI ATTAAT 1 cut(s) 1922
XapI RAATTY 5 cut(s) 368, 716, 833, 1378, 2626
XceI RCATGY 4 cut(s) 796, 1040, 1454, 2153
XhoI CTCGAG 1 cut(s) 2261
XmiI GTMKAC 4 cut(s) 654, 2803, 2838, 3210
XmnI GAANNNNTTC 3 cut(s) 2571, 2614, 2709
XspI CTAG 9 cut(s) 1214, 1389, 1764, 1892, 2027, 2316, 3071, 3282, 3324
ZrmI AGTACT 2 cut(s) 1566, 3286
Zsp2I ATGCAT 1 cut(s) 1494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.