Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 12 - 104 | 7.5e-15 | Rx N-terminal domain |
| NB-ARC | PF00931 | 170 - 341 | 1.8e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 427 - 494 | 3.8e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 570 - 631 | 1.5e-11 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 600 - 873 | 2.1e-21 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 686 - 811 | 1.1e-33 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1019 |
| Acc16I | TGCGCA | 1 cut(s) | 1628 |
| Acc36I | ACCTGC | 1 cut(s) | 1019 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1588 |
| AccII | CGCG | 1 cut(s) | 2804 |
| AccIII | TCCGGA | 1 cut(s) | 2932 |
| AciI | CCGC | 1 cut(s) | 464 |
| AclWI | GGATC | 4 cut(s) | 608, 1056, 1347, 2206 |
| AcsI | RAATTY | 6 cut(s) | 86, 378, 692, 1595, 2100, 2674 |
| AcuI | CTGAAG | 3 cut(s) | 806, 2060, 2873 |
| AcyI | GRCGYC | 2 cut(s) | 171, 871 |
| AfaI | GTAC | 5 cut(s) | 327, 1695, 1852, 1859, 1960 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 306, 587, 1099, 1588, 1988, 2393, 2939 |
| AflII | CTTAAG | 1 cut(s) | 2663 |
| AflIII | ACRYGT | 3 cut(s) | 1176, 1809, 2802 |
| AhlI | ACTAGT | 1 cut(s) | 2182 |
| AjnI | CCWGG | 3 cut(s) | 45, 304, 365 |
| Alw21I | GWGCWC | 3 cut(s) | 442, 2095, 2241 |
| Alw26I | GTCTC | 6 cut(s) | 382, 501, 1127, 1491, 2452, 2466 |
| AlwI | GGATC | 4 cut(s) | 608, 1056, 1347, 2206 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2083 |
| Aor13HI | TCCGGA | 1 cut(s) | 2932 |
| AoxI | GGCC | 2 cut(s) | 1090, 2723 |
| ApeKI | GCWGC | 3 cut(s) | 1103, 2398, 2797 |
| ApoI | RAATTY | 6 cut(s) | 86, 378, 692, 1595, 2100, 2674 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 949, 981 |
| AseI | ATTAAT | 1 cut(s) | 1928 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 809, 1092, 2928 |
| AspLEI | GCGC | 2 cut(s) | 223, 1629 |
| AspS9I | GGNCC | 1 cut(s) | 2456 |
| AsuC2I | CCSGG | 2 cut(s) | 1911, 2310 |
| AsuHPI | GGTGA | 2 cut(s) | 2576, 2734 |
| AvaII | GGWCC | 1 cut(s) | 2456 |
| BbsI | GAAGAC | 1 cut(s) | 492 |
| Bbv12I | GWGCWC | 3 cut(s) | 442, 2095, 2241 |
| BbvCI | CCTCAGC | 1 cut(s) | 246 |
| BbvI | GCAGC | 3 cut(s) | 1090, 2410, 2784 |
| BccI | CCATC | 8 cut(s) | 58, 107, 937, 1950, 2395, 2413, 2890, 2956 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 914, 948 |
| BciT130I | CCWGG | 3 cut(s) | 47, 306, 367 |
| BciVI | GTATCC | 1 cut(s) | 1501 |
| BcnI | CCSGG | 2 cut(s) | 1911, 2310 |
| BcoDI | GTCTC | 6 cut(s) | 382, 501, 1127, 1491, 2452, 2466 |
| BcuI | ACTAGT | 1 cut(s) | 2182 |
| BfaI | CTAG | 6 cut(s) | 392, 764, 1967, 2183, 2435, 2543 |
| BfmI | CTRYAG | 1 cut(s) | 2451 |
| BfrI | CTTAAG | 1 cut(s) | 2663 |
| BfuAI | ACCTGC | 1 cut(s) | 1019 |
| BfuI | GTATCC | 1 cut(s) | 1501 |
| BglII | AGATCT | 2 cut(s) | 766, 2501 |
| BisI | GCNGC | 3 cut(s) | 1104, 2399, 2798 |
| BlpI | GCTNAGC | 1 cut(s) | 621 |
| BlsI | GCNGC | 3 cut(s) | 1105, 2400, 2799 |
| Bme1390I | CCNGG | 5 cut(s) | 47, 306, 367, 1911, 2310 |
| Bme18I | GGWCC | 1 cut(s) | 2456 |
| BmgT120I | GGNCC | 1 cut(s) | 2456 |
| BmiI | GGNNCC | 3 cut(s) | 462, 761, 839 |
| BmrFI | CCNGG | 5 cut(s) | 47, 306, 367, 1911, 2310 |
| BmrI | ACTGGG | 1 cut(s) | 2402 |
| BmsI | GCATC | 8 cut(s) | 195, 208, 232, 541, 1965, 2089, 2125, 2428 |
| BmuI | ACTGGG | 1 cut(s) | 2402 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2639 |
| BpiI | GAAGAC | 1 cut(s) | 492 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 15, 47, 1534, 1566, 2223, 2255 |
| BpmI | CTGGAG | 2 cut(s) | 278, 906 |
| Bpu10I | CCTNAGC | 1 cut(s) | 246 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 621 |
| BpuEI | CTTGAG | 6 cut(s) | 77, 107, 1238, 1393, 1957, 2618 |
| BpuMI | CCSGG | 2 cut(s) | 1911, 2310 |
| BsaAI | YACGTR | 1 cut(s) | 1430 |
| BsaHI | GRCGYC | 2 cut(s) | 171, 871 |
| BsaI | GGTCTC | 2 cut(s) | 1127, 2452 |
| BsaJI | CCNNGG | 3 cut(s) | 174, 305, 2698 |
| BsaWI | WCCGGW | 1 cut(s) | 2932 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 306, 587, 1099, 1588, 1988, 2393, 2939 |
| Bse1I | ACTGG | 5 cut(s) | 215, 562, 2397, 2692, 2726 |
| Bse3DI | GCAATG | 2 cut(s) | 399, 2991 |
| BseAI | TCCGGA | 1 cut(s) | 2932 |
| BseBI | CCWGG | 3 cut(s) | 47, 306, 367 |
| BseDI | CCNNGG | 3 cut(s) | 174, 305, 2698 |
| BseGI | GGATG | 5 cut(s) | 55, 223, 1441, 1529, 2405 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 306, 587, 1099, 1588, 1988, 2393, 2939 |
| BseMI | GCAATG | 2 cut(s) | 399, 2991 |
| BseMII | CTCAG | 6 cut(s) | 179, 237, 635, 1664, 1916, 2451 |
| BseNI | ACTGG | 5 cut(s) | 215, 562, 2397, 2692, 2726 |
| BseRI | GAGGAG | 4 cut(s) | 191, 275, 527, 1532 |
| BseXI | GCAGC | 3 cut(s) | 1090, 2410, 2784 |
| BsgI | GTGCAG | 1 cut(s) | 2783 |
| Bsh1236I | CGCG | 1 cut(s) | 2804 |
| BshFI | GGCC | 2 cut(s) | 1092, 2725 |
| BsiHKAI | GWGCWC | 3 cut(s) | 442, 2095, 2241 |
| BsiSI | CCGG | 3 cut(s) | 1910, 2309, 2933 |
| BslFI | GGGAC | 3 cut(s) | 858, 2604, 2647 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 306, 587, 1099, 1588, 1988, 2393, 2939 |
| BsmAI | GTCTC | 6 cut(s) | 382, 501, 1127, 1491, 2452, 2466 |
| BsmBI | CGTCTC | 1 cut(s) | 501 |
| BsmFI | GGGAC | 3 cut(s) | 858, 2604, 2647 |
| BsnI | GGCC | 2 cut(s) | 1092, 2725 |
| Bso31I | GGTCTC | 2 cut(s) | 1127, 2452 |
| Bsp1286I | GDGCHC | 3 cut(s) | 442, 2095, 2241 |
| Bsp13I | TCCGGA | 1 cut(s) | 2932 |
| Bsp1407I | TGTACA | 1 cut(s) | 1857 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 621 |
| BspACI | CCGC | 1 cut(s) | 464 |
| BspANI | GGCC | 2 cut(s) | 1092, 2725 |
| BspCNI | CTCAG | 6 cut(s) | 180, 238, 634, 1665, 1915, 2452 |
| BspEI | TCCGGA | 1 cut(s) | 2932 |
| BspFNI | CGCG | 1 cut(s) | 2804 |
| BspLI | GGNNCC | 3 cut(s) | 462, 761, 839 |
| BspMI | ACCTGC | 1 cut(s) | 1019 |
| BspPI | GGATC | 4 cut(s) | 608, 1056, 1347, 2206 |
| BspTI | CTTAAG | 1 cut(s) | 2663 |
| BspTNI | GGTCTC | 2 cut(s) | 1127, 2452 |
| BsrDI | GCAATG | 2 cut(s) | 399, 2991 |
| BsrGI | TGTACA | 1 cut(s) | 1857 |
| BsrI | ACTGG | 5 cut(s) | 215, 562, 2397, 2692, 2726 |
| BssECI | CCNNGG | 3 cut(s) | 174, 305, 2698 |
| BssNI | GRCGYC | 2 cut(s) | 171, 871 |
| BssT1I | CCWWGG | 1 cut(s) | 2698 |
| Bst2UI | CCWGG | 3 cut(s) | 47, 306, 367 |
| Bst4CI | ACNGT | 2 cut(s) | 1172, 1326 |
| Bst6I | CTCTTC | 3 cut(s) | 341, 499, 2892 |
| BstACI | GRCGYC | 2 cut(s) | 171, 871 |
| BstAFI | CTTAAG | 1 cut(s) | 2663 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1013 |
| BstAUI | TGTACA | 1 cut(s) | 1857 |
| BstBAI | YACGTR | 1 cut(s) | 1430 |
| BstC8I | GCNNGC | 3 cut(s) | 1215, 1543, 2802 |
| BstEII | GGTNACC | 1 cut(s) | 2261 |
| BstF5I | GGATG | 5 cut(s) | 55, 223, 1441, 1529, 2405 |
| BstFNI | CGCG | 1 cut(s) | 2804 |
| BstHHI | GCGC | 2 cut(s) | 223, 1629 |
| BstMAI | GTCTC | 6 cut(s) | 382, 501, 1127, 1491, 2452, 2466 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 220, 1013 |
| BstNI | CCWGG | 3 cut(s) | 47, 306, 367 |
| BstNSI | RCATGY | 3 cut(s) | 1016, 1180, 1813 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2639 |
| BstPI | GGTNACC | 1 cut(s) | 2261 |
| BstSCI | CCNGG | 5 cut(s) | 45, 304, 365, 1909, 2308 |
| BstSFI | CTRYAG | 1 cut(s) | 2451 |
| BstSNI | TACGTA | 1 cut(s) | 1430 |
| BstUI | CGCG | 1 cut(s) | 2804 |
| BstV1I | GCAGC | 3 cut(s) | 1090, 2410, 2784 |
| BstV2I | GAAGAC | 1 cut(s) | 492 |
| BstX2I | RGATCY | 4 cut(s) | 766, 1048, 1339, 2501 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1221, 2258 |
| BstYI | RGATCY | 4 cut(s) | 766, 1048, 1339, 2501 |
| BsuI | GTATCC | 1 cut(s) | 1501 |
| BsuRI | GGCC | 2 cut(s) | 1092, 2725 |
| BtsCI | GGATG | 5 cut(s) | 55, 223, 1441, 1529, 2405 |
| BtsI | GCAGTG | 1 cut(s) | 2448 |
| BtsIMutI | CAGTG | 5 cut(s) | 208, 1177, 2390, 2434, 2448 |
| BveI | ACCTGC | 1 cut(s) | 1019 |
| Cac8I | GCNNGC | 3 cut(s) | 1215, 1543, 2802 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2083 |
| CfoI | GCGC | 2 cut(s) | 223, 1629 |
| Cfr13I | GGNCC | 1 cut(s) | 2456 |
| CseI | GACGC | 4 cut(s) | 179, 359, 860, 2793 |
| Csp6I | GTAC | 5 cut(s) | 326, 1694, 1851, 1858, 1959 |
| CviQI | GTAC | 5 cut(s) | 326, 1694, 1851, 1858, 1959 |
| DraI | TTTAAA | 1 cut(s) | 429 |
| Eam1104I | CTCTTC | 3 cut(s) | 341, 499, 2892 |
| EarI | CTCTTC | 3 cut(s) | 341, 499, 2892 |
| EciI | GGCGGA | 1 cut(s) | 453 |
| Eco105I | TACGTA | 1 cut(s) | 1430 |
| Eco130I | CCWWGG | 1 cut(s) | 2698 |
| Eco147I | AGGCCT | 1 cut(s) | 1092 |
| Eco31I | GGTCTC | 2 cut(s) | 1127, 2452 |
| Eco47I | GGWCC | 1 cut(s) | 2456 |
| Eco57I | CTGAAG | 3 cut(s) | 806, 2060, 2873 |
| Eco91I | GGTNACC | 1 cut(s) | 2261 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2456 |
| EcoO65I | GGTNACC | 1 cut(s) | 2261 |
| EcoRI | GAATTC | 1 cut(s) | 86 |
| EcoRII | CCWGG | 3 cut(s) | 45, 304, 365 |
| EcoT14I | CCWWGG | 1 cut(s) | 2698 |
| EcoT22I | ATGCAT | 3 cut(s) | 673, 855, 1461 |
| ErhI | CCWWGG | 1 cut(s) | 2698 |
| Esp3I | CGTCTC | 1 cut(s) | 501 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 405, 437, 779, 811, 797, 829 |
| FaqI | GGGAC | 3 cut(s) | 858, 2604, 2647 |
| Fnu4HI | GCNGC | 3 cut(s) | 1104, 2399, 2798 |
| FokI | GGATG | 5 cut(s) | 62, 230, 1448, 1516, 2392 |
| Fsp4HI | GCNGC | 3 cut(s) | 1104, 2399, 2798 |
| FspBI | CTAG | 6 cut(s) | 392, 764, 1967, 2183, 2435, 2543 |
| FspI | TGCGCA | 1 cut(s) | 1628 |
| GlaI | GCGC | 2 cut(s) | 222, 1628 |
| GluI | GCNGC | 3 cut(s) | 1104, 2399, 2798 |
| GsuI | CTGGAG | 2 cut(s) | 278, 906 |
| HaeIII | GGCC | 2 cut(s) | 1092, 2725 |
| HapII | CCGG | 3 cut(s) | 1910, 2309, 2933 |
| HgaI | GACGC | 4 cut(s) | 179, 359, 860, 2793 |
| HhaI | GCGC | 2 cut(s) | 223, 1629 |
| Hin1I | GRCGYC | 2 cut(s) | 171, 871 |
| Hin6I | GCGC | 2 cut(s) | 221, 1627 |
| HinP1I | GCGC | 2 cut(s) | 221, 1627 |
| HindIII | AAGCTT | 2 cut(s) | 2072, 2999 |
| HpaII | CCGG | 3 cut(s) | 1910, 2309, 2933 |
| HphI | GGTGA | 2 cut(s) | 2576, 2734 |
| Hpy166II | GTNNAC | 3 cut(s) | 1851, 2708, 2852 |
| Hpy8I | GTNNAC | 3 cut(s) | 1851, 2708, 2852 |
| HpyCH4III | ACNGT | 2 cut(s) | 1172, 1326 |
| HpyCH4IV | ACGT | 2 cut(s) | 1367, 1429 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 220, 1013 |
| HpySE526I | ACGT | 2 cut(s) | 1367, 1429 |
| Hsp92I | GRCGYC | 2 cut(s) | 171, 871 |
| HspAI | GCGC | 2 cut(s) | 221, 1627 |
| Kpn2I | TCCGGA | 1 cut(s) | 2932 |
| LmnI | GCTCC | 6 cut(s) | 23, 445, 466, 1613, 2047, 2090 |
| Lsp1109I | GCAGC | 3 cut(s) | 1090, 2410, 2784 |
| LweI | GCATC | 8 cut(s) | 195, 208, 232, 541, 1965, 2089, 2125, 2428 |
| MaeI | CTAG | 6 cut(s) | 392, 764, 1967, 2183, 2435, 2543 |
| MaeII | ACGT | 2 cut(s) | 1367, 1429 |
| MfeI | CAATTG | 2 cut(s) | 198, 582 |
| MflI | RGATCY | 4 cut(s) | 766, 1048, 1339, 2501 |
| MhlI | GDGCHC | 3 cut(s) | 442, 2095, 2241 |
| MluI | ACGCGT | 1 cut(s) | 2802 |
| MlyI | GAGTC | 2 cut(s) | 482, 1543 |
| MmeI | TCCRAC | 7 cut(s) | 1350, 1360, 1494, 1557, 1662, 2275, 2539 |
| Mph1103I | ATGCAT | 3 cut(s) | 673, 855, 1461 |
| MroI | TCCGGA | 1 cut(s) | 2932 |
| MroXI | GAANNNNTTC | 3 cut(s) | 809, 1092, 2928 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1947, 2085, 2130, 2427, 2528, 2713 |
| MspCI | CTTAAG | 1 cut(s) | 2663 |
| MspI | CCGG | 3 cut(s) | 1910, 2309, 2933 |
| MspR9I | CCNGG | 5 cut(s) | 47, 306, 367, 1911, 2310 |
| MunI | CAATTG | 2 cut(s) | 198, 582 |
| MvaI | CCWGG | 3 cut(s) | 47, 306, 367 |
| MvnI | CGCG | 1 cut(s) | 2804 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 220, 1013 |
| NciI | CCSGG | 2 cut(s) | 1911, 2310 |
| NlaIV | GGNNCC | 3 cut(s) | 462, 761, 839 |
| NmeAIII | GCCGAG | 1 cut(s) | 199 |
| NmuCI | GTSAC | 5 cut(s) | 453, 910, 1172, 2018, 2776 |
| NsbI | TGCGCA | 1 cut(s) | 1628 |
| NsiI | ATGCAT | 3 cut(s) | 673, 855, 1461 |
| NspI | RCATGY | 3 cut(s) | 1016, 1180, 1813 |
| PaqCI | CACCTGC | 1 cut(s) | 1019 |
| PceI | AGGCCT | 1 cut(s) | 1092 |
| PciI | ACATGT | 2 cut(s) | 1176, 1809 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 171, 551 |
| PdmI | GAANNNNTTC | 3 cut(s) | 809, 1092, 2928 |
| PfeI | GAWTC | 9 cut(s) | 577, 881, 1526, 1731, 1772, 1841, 2924, 2960, 2970 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1588 |
| PfoI | TCCNGGA | 1 cut(s) | 45 |
| PkrI | GCNGC | 3 cut(s) | 1105, 2400, 2799 |
| PleI | GAGTC | 2 cut(s) | 482, 1543 |
| PpsI | GAGTC | 2 cut(s) | 482, 1543 |
| Ppu21I | YACGTR | 1 cut(s) | 1430 |
| PpuMI | RGGWCCY | 1 cut(s) | 2456 |
| PscI | ACATGT | 2 cut(s) | 1176, 1809 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2639 |
| PshBI | ATTAAT | 1 cut(s) | 1928 |
| Psp5II | RGGWCCY | 1 cut(s) | 2456 |
| Psp6I | CCWGG | 3 cut(s) | 45, 304, 365 |
| PspEI | GGTNACC | 1 cut(s) | 2261 |
| PspGI | CCWGG | 3 cut(s) | 45, 304, 365 |
| PspN4I | GGNNCC | 3 cut(s) | 462, 761, 839 |
| PspPI | GGNCC | 1 cut(s) | 2456 |
| PspPPI | RGGWCCY | 1 cut(s) | 2456 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2083 |
| PsuI | RGATCY | 4 cut(s) | 766, 1048, 1339, 2501 |
| RsaI | GTAC | 5 cut(s) | 327, 1695, 1852, 1859, 1960 |
| RsaNI | GTAC | 5 cut(s) | 326, 1694, 1851, 1858, 1959 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1947, 2085, 2130, 2427, 2528, 2713 |
| SatI | GCNGC | 3 cut(s) | 1104, 2399, 2798 |
| Sau96I | GGNCC | 1 cut(s) | 2456 |
| SchI | GAGTC | 2 cut(s) | 482, 1543 |
| ScrFI | CCNGG | 5 cut(s) | 47, 306, 367, 1911, 2310 |
| SduI | GDGCHC | 3 cut(s) | 442, 2095, 2241 |
| SfaNI | GCATC | 8 cut(s) | 195, 208, 232, 541, 1965, 2089, 2125, 2428 |
| SfcI | CTRYAG | 1 cut(s) | 2451 |
| SinI | GGWCC | 1 cut(s) | 2456 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1947, 2085, 2130, 2427, 2528, 2713 |
| SmlI | CTYRAG | 7 cut(s) | 92, 122, 1253, 1408, 1936, 2597, 2663 |
| SmoI | CTYRAG | 7 cut(s) | 92, 122, 1253, 1408, 1936, 2597, 2663 |
| SnaBI | TACGTA | 1 cut(s) | 1430 |
| SpeI | ACTAGT | 1 cut(s) | 2182 |
| SseBI | AGGCCT | 1 cut(s) | 1092 |
| SsiI | CCGC | 1 cut(s) | 464 |
| SspI | AATATT | 4 cut(s) | 1622, 2119, 2152, 2773 |
| SspMI | CTAG | 6 cut(s) | 392, 764, 1967, 2183, 2435, 2543 |
| StuI | AGGCCT | 1 cut(s) | 1092 |
| StyD4I | CCNGG | 5 cut(s) | 45, 304, 365, 1909, 2308 |
| StyI | CCWWGG | 1 cut(s) | 2698 |
| TaaI | ACNGT | 2 cut(s) | 1172, 1326 |
| TaiI | ACGT | 2 cut(s) | 1370, 1432 |
| TaqI | TCGA | 6 cut(s) | 165, 294, 740, 1953, 2241, 3016 |
| TatI | WGTACW | 1 cut(s) | 1857 |
| TfiI | GAWTC | 9 cut(s) | 577, 881, 1526, 1731, 1772, 1841, 2924, 2960, 2970 |
| TscAI | CASTG | 5 cut(s) | 215, 1177, 2397, 2434, 2448 |
| TseFI | GTSAC | 5 cut(s) | 453, 910, 1172, 2018, 2776 |
| TseI | GCWGC | 3 cut(s) | 1103, 2398, 2797 |
| Tsp45I | GTSAC | 5 cut(s) | 453, 910, 1172, 2018, 2776 |
| TspGWI | ACGGA | 2 cut(s) | 909, 2549 |
| TspRI | CASTG | 5 cut(s) | 215, 1177, 2397, 2434, 2448 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1588 |
| Vha464I | CTTAAG | 1 cut(s) | 2663 |
| VpaK11BI | GGWCC | 1 cut(s) | 2456 |
| VspI | ATTAAT | 1 cut(s) | 1928 |
| XapI | RAATTY | 6 cut(s) | 86, 378, 692, 1595, 2100, 2674 |
| XceI | RCATGY | 3 cut(s) | 1016, 1180, 1813 |
| XmnI | GAANNNNTTC | 3 cut(s) | 809, 1092, 2928 |
| XspI | CTAG | 6 cut(s) | 392, 764, 1967, 2183, 2435, 2543 |
| Zsp2I | ATGCAT | 3 cut(s) | 673, 855, 1461 |