MD07G1055800.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
5141013 .. 5143269
2257 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1055800.v1.1.491

Sequence Viewer

Length: 2214 bp
ATGAGTTTGCTTCAAGTTAAACTTAGGGAACAAGTGAGGGGGAAAAAGTTCCTATTTGTGTTGGATGACCTTTGGAATGACGACTATAGTGATTGGGATATTGTAAGGACTCCTTTTACTTATGGGGCGAGGGGAAGCAAGGCCGTCGTGACAACAAGGAACAAAAGTGTTGCATCCATTGTGCACACCGTTCCCATTTACTCTTTGGAACAATTGTCGCATGAAGATTGTTGGTTGTTACTTGCAAAACATGCATTTAGAAATGAAAATCCTAGTGTGCATCCAGACTTGGAAGAAATTGGTAGGCAAATTGCACGCAAGTGCAATGGTCTTCCTTTAGCTGCAAAAGCACTTGGGGGTCTCTTAGGTTGTAATGTAGGTTACAAGGAATGGAGTCACATATTGAACAACAATCTTTGGGAGATATTGCATACTGATAAAAGTGTTCTTCCATCTTTAAGATTGAGTTACCATTATCTCCCTACTTATTTAAAACAATGCTTTGCTTATCTCTCAATTTTCCCAAAGGACTACGAATTTGAAAAGGAATATATAATTCTACTTTGGATGGCAGTGGGTTTAATTCCACAAGTTGAGAGTTGTAAAGGATTGGAAGAGCTTGGTGAGAGATACTTTGATGAACTATTGTCACGATCACTACTTCAAAGATCATTAATTAAGGAATCATCAAGTTTCACAATGCATGATCTCATTAACGATTTGGCTATGTTTGTGTCTGGAGAATTTTGTTTTAGGTTGGAGGAGGGAGAGTCGCACGAAGTTCCTAAAAGAGTAAGGCATTTGTCATATATGAGAGGAAGATTTGATACTGCCGCAAAATTTAAGTCATTGGATGAAATTAAGTGTTTGCGAACCTTATTTCCTATGTCTTTAAGACCATACAGAAAGTGGGATAAGAGCCTATATGTAAGCATAAAGGTTTTAGACGATTTGTTACCATCAGTAAAATGTTTACGGGTGTTGTCACTGTCAAGATATAAAAATATCACGCAATTACCTGATAACATTGGTAAACACTTAAACTTGCGCTACGTTGATCTCTCTCACACTGCAGTTAAAAAGTTACCAGGTATGATGTGTACTCTCTACAATTTGCAAACTCTATTGTTGGTCGGTTGTTCCTCTCTTGTTGAATTGCCTGCAGACATAAGGAAATTGATTAATTTGCGTCATCTTGATATCAGTGGAACTTGTATAAAAGAGATGCCGGTGCAAATGTGTAGACTAAAAAGTTTGAGAACATTGACTGCTTTTGTGTTGGGGGAATCTACTAGGTCGGGTGGCATTGGTGAACTGGGGCAATTGTCGAACCTTCGAGGAAAACTATCTATCTTGAATCTGCAAAATGTCGTCAATCATATGGATGCTTTGGGGGCCAATTTGAAGGATAAGAAAGATCTCAACGAAGTAGAGTTGGCATGGGGTCGTGAGGATGCAAATGATTCCGTAAAAGAGAGACATGTACTTGAAAGCCTACAACCTTCCGTAAATCTGGTGAAGCTCACCATCAGATTTTATGGTGGAACCAGCTTTCCGGATTGGTTGGGGGACTCCTCCTTCTCCAACATACAAGTCATGCGTCTCAGCGAATGTAGTACCTGCCTGTCATTGCCACCAGTTGGGCGGTTACCCGCTCTCGAAGAGCTCTATATAGAAAGGATGAAATTTGTTGTGAGCATTGGTGTTGAGTTCTACGGGGGTAATGGAGCTTCTCTAAGTCAACCATTTCAATCTCTCAAGAAGCTAAAGTTCAAAGAGATGCCGGAGTGGGCGGAATGGCTACCATGTCCAGGCAGAGGTCAATCTCTAGACTTTCCTCGTCTCGAGGAGCTGAGTTTAGAGAATTGTCCGAAGCTGAGGGGAAACTTGCCCGATCATCTTCCTTCATTGAGACAGCTTTGGGTGTCAGACTGCGGGGTTCTACATGAAAGGGCTACCAGAACAAGATGGATACCTTGGTCTCTCATCGTCAACACGGAGTCCTTGCGACAATCTCTTGAACAACTGAAGATAGTTAGATGCCCTGGTCTGTCGTCGTTACTGGAGAAGGAGTCGCTTTCCTCGCTTTCCAAACTTGAGATTCAATTTTTTAGTCGCGGAGAATGCTTGCGGCCGCACTTGAGCAATTGTCTTAAAGATTTGACTCTGTATAACTGCGCATCACTCTTGTCGTTCCCTAGAAATGGAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

738

Amino Acids

84.07

Weight (kDa)

8.57

Isoelectric Point (pI)

47.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 4 - 89 4.9e-15 NB-ARC domain
WHD_DRP PF23559 173 - 242 2.4e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 318 - 643 2.4e-29 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 436 - 561 2.1e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2179
Acc36I ACCTGC 1 cut(s) 1628
AccB7I CCANNNNNTGG 1 cut(s) 1640
AccBSI CCGCTC 1 cut(s) 1655
AccI GTMKAC 1 cut(s) 1243
AccII CGCG 1 cut(s) 2118
AccIII TCCGGA 1 cut(s) 1555
AciI CCGC 8 cut(s) 834, 1645, 1653, 1793, 1935, 2118, 2131, 2135
AcoI YGGCCR 1 cut(s) 2132
AcsI RAATTY 4 cut(s) 536, 743, 839, 1685
AcuI CTGAAG 1 cut(s) 2048
AfaI GTAC 3 cut(s) 1102, 1485, 1618
AfiI CCNNNNNNNGG 4 cut(s) 1640, 1811, 1817, 2204
AflIII ACRYGT 1 cut(s) 1480
AjnI CCWGG 3 cut(s) 1087, 1810, 2044
AleI CACNNNNGTG 1 cut(s) 319
AloI GAACNNNNNNTCC 4 cut(s) 865, 897, 1537, 1569
Alw21I GWGCWC 2 cut(s) 186, 1668
Alw26I GTCTC 6 cut(s) 365, 1471, 1607, 1847, 1906, 1986
Alw44I GTGCAC 1 cut(s) 182
Ama87I CYCGRG 1 cut(s) 1844
Aor13HI TCCGGA 1 cut(s) 1555
AoxI GGCC 3 cut(s) 141, 1395, 2132
ApaLI GTGCAC 1 cut(s) 182
ApeKI GCWGC 1 cut(s) 341
ApoI RAATTY 4 cut(s) 536, 743, 839, 1685
ArsI GACNNNNNNTTYG 4 cut(s) 521, 553, 830, 862
AseI ATTAAT 2 cut(s) 674, 1182
Asp700I GAANNNNTTC 1 cut(s) 47
AspLEI GCGC 2 cut(s) 1050, 2180
AspS9I GGNCC 1 cut(s) 1395
AsuHPI GGTGA 4 cut(s) 635, 1322, 1516, 1528
AvaI CYCGRG 1 cut(s) 1844
BaeGI GKGCMC 1 cut(s) 186
BaeI ACNNNNGTAYC 2 cut(s) 1964, 1997
BanII GRGCYC 1 cut(s) 1668
BarI GAAGNNNNNNTAC 4 cut(s) 811, 843, 1714, 1746
BbsI GAAGAC 1 cut(s) 323
Bbv12I GWGCWC 2 cut(s) 186, 1668
BbvCI CCTCAGC 1 cut(s) 1877
BbvI GCAGC 1 cut(s) 328
BccI CCATC 5 cut(s) 460, 562, 967, 1535, 1962
BceAI ACGGC 1 cut(s) 128
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BciT130I CCWGG 3 cut(s) 1089, 1812, 2046
BciVI GTATCC 1 cut(s) 1965
BcoDI GTCTC 6 cut(s) 365, 1471, 1607, 1847, 1906, 1986
BfaI CTAG 4 cut(s) 273, 1293, 1829, 2199
BfmI CTRYAG 3 cut(s) 85, 1071, 1161
BfuAI ACCTGC 1 cut(s) 1628
BfuI GTATCC 1 cut(s) 1965
BglII AGATCT 1 cut(s) 1417
BisI GCNGC 4 cut(s) 342, 834, 2132, 2135
BlsI GCNGC 4 cut(s) 343, 835, 2133, 2136
Bme1390I CCNGG 3 cut(s) 1089, 1812, 2046
BmeT110I CYCGRG 1 cut(s) 1844
BmgT120I GGNCC 1 cut(s) 1395
BmiI GGNNCC 2 cut(s) 1396, 1546
BmrFI CCNGG 3 cut(s) 1089, 1812, 2046
BmrI ACTGGG 1 cut(s) 1325
BmsI GCATC 8 cut(s) 182, 289, 1215, 1375, 1444, 1770, 2030, 2189
BmuI ACTGGG 1 cut(s) 1325
BpiI GAAGAC 1 cut(s) 323
BpmI CTGGAG 2 cut(s) 759, 2084
Bpu10I CCTNAGC 1 cut(s) 1877
BpuEI CTTGAG 3 cut(s) 1742, 2117, 2161
BsaI GGTCTC 2 cut(s) 365, 1986
BsaJI CCNNGG 2 cut(s) 1976, 2044
BsaWI WCCGGW 1 cut(s) 1555
BsaXI ACNNNNNCTCC 4 cut(s) 755, 785, 2057, 2087
Bsc4I CCNNNNNNNGG 4 cut(s) 1640, 1811, 1817, 2204
Bse118I RCCGGY 1 cut(s) 1228
Bse1I ACTGG 3 cut(s) 1320, 1637, 2067
Bse3DI GCAATG 2 cut(s) 331, 1628
BseAI TCCGGA 1 cut(s) 1555
BseBI CCWGG 3 cut(s) 1089, 1812, 2046
BseDI CCNNGG 2 cut(s) 1976, 2044
BseGI GGATG 8 cut(s) 70, 173, 280, 573, 859, 1390, 1459, 1686
BseLI CCNNNNNNNGG 4 cut(s) 1640, 1811, 1817, 2204
BseMI GCAATG 2 cut(s) 331, 1628
BseMII CTCAG 3 cut(s) 1618, 1844, 1868
BseNI ACTGG 3 cut(s) 1320, 1637, 2067
BseRI GAGGAG 3 cut(s) 776, 1564, 1862
BseSI GKGCMC 1 cut(s) 186
BseX3I CGGCCG 1 cut(s) 2132
BseXI GCAGC 1 cut(s) 328
Bsh1236I CGCG 1 cut(s) 2118
Bsh1285I CGRYCG 1 cut(s) 2135
BshFI GGCC 3 cut(s) 143, 1397, 2134
BsiEI CGRYCG 1 cut(s) 2135
BsiHKAI GWGCWC 2 cut(s) 186, 1668
BsiHKCI CYCGRG 1 cut(s) 1844
BsiSI CCGG 3 cut(s) 1229, 1556, 1784
BslFI GGGAC 1 cut(s) 1583
BslI CCNNNNNNNGG 4 cut(s) 1640, 1811, 1817, 2204
BsmAI GTCTC 6 cut(s) 365, 1471, 1607, 1847, 1906, 1986
BsmBI CGTCTC 2 cut(s) 1607, 1847
BsmFI GGGAC 1 cut(s) 1583
BsmI GAATGC 1 cut(s) 2129
BsnI GGCC 3 cut(s) 143, 1397, 2134
Bso31I GGTCTC 2 cut(s) 365, 1986
BsoBI CYCGRG 1 cut(s) 1844
Bsp1286I GDGCHC 2 cut(s) 186, 1668
Bsp13I TCCGGA 1 cut(s) 1555
Bsp143I GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
BspACI CCGC 8 cut(s) 834, 1645, 1653, 1793, 1935, 2118, 2131, 2135
BspANI GGCC 3 cut(s) 143, 1397, 2134
BspCNI CTCAG 3 cut(s) 1617, 1845, 1869
BspEI TCCGGA 1 cut(s) 1555
BspFNI CGCG 1 cut(s) 2118
BspLI GGNNCC 2 cut(s) 1396, 1546
BspMAI CTGCAG 2 cut(s) 1075, 1165
BspMI ACCTGC 1 cut(s) 1628
BspQI GCTCTTC 2 cut(s) 609, 1656
BspTNI GGTCTC 2 cut(s) 365, 1986
BsrBI CCGCTC 1 cut(s) 1655
BsrDI GCAATG 2 cut(s) 331, 1628
BsrFI RCCGGY 1 cut(s) 1228
BsrI ACTGG 3 cut(s) 1320, 1637, 2067
BssAI RCCGGY 1 cut(s) 1228
BssECI CCNNGG 2 cut(s) 1976, 2044
BssMI GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
BssT1I CCWWGG 1 cut(s) 1976
Bst2UI CCWGG 3 cut(s) 1089, 1812, 2046
Bst4CI ACNGT 2 cut(s) 190, 990
Bst6I CTCTTC 2 cut(s) 609, 1656
BstAPI GCANNNNNTGC 1 cut(s) 251
BstC8I GCNNGC 3 cut(s) 316, 1161, 2129
BstDEI CTNAG 6 cut(s) 23, 364, 1604, 1736, 1853, 1877
BstEII GGTNACC 1 cut(s) 1647
BstF5I GGATG 8 cut(s) 70, 173, 280, 573, 859, 1390, 1459, 1686
BstFNI CGCG 1 cut(s) 2118
BstHHI GCGC 2 cut(s) 1050, 2180
BstKTI GATC 6 cut(s) 656, 671, 709, 1060, 1420, 1897
BstMAI GTCTC 6 cut(s) 365, 1471, 1607, 1847, 1906, 1986
BstMBI GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
BstMCI CGRYCG 1 cut(s) 2135
BstMWI GCNNNNNNNGC 5 cut(s) 251, 347, 1394, 2083, 2124
BstNI CCWGG 3 cut(s) 1089, 1812, 2046
BstNSI RCATGY 2 cut(s) 254, 1484
BstPI GGTNACC 1 cut(s) 1647
BstSCI CCNGG 3 cut(s) 1087, 1810, 2044
BstSFI CTRYAG 3 cut(s) 85, 1071, 1161
BstSLI GKGCMC 1 cut(s) 186
BstUI CGCG 1 cut(s) 2118
BstV1I GCAGC 1 cut(s) 328
BstV2I GAAGAC 1 cut(s) 323
BstX2I RGATCY 1 cut(s) 1417
BstYI RGATCY 1 cut(s) 1417
BstZI CGGCCG 1 cut(s) 2132
BsuI GTATCC 1 cut(s) 1965
BsuRI GGCC 3 cut(s) 143, 1397, 2134
BtsCI GGATG 8 cut(s) 70, 173, 280, 573, 859, 1390, 1459, 1686
BtsI GCAGTG 2 cut(s) 579, 1068
BtsIMutI CAGTG 4 cut(s) 579, 986, 1068, 1210
BveI ACCTGC 1 cut(s) 1628
Cac8I GCNNGC 3 cut(s) 316, 1161, 2129
CciNI GCGGCCGC 1 cut(s) 2132
CfoI GCGC 2 cut(s) 1050, 2180
Cfr10I RCCGGY 1 cut(s) 1228
Cfr13I GGNCC 1 cut(s) 1395
CseI GACGC 2 cut(s) 1178, 1589
CsiI ACCWGGT 1 cut(s) 1087
Csp6I GTAC 3 cut(s) 1101, 1484, 1617
CviAII CATG 8 cut(s) 221, 251, 704, 1440, 1481, 1597, 1806, 1946
CviQI GTAC 3 cut(s) 1101, 1484, 1617
DdeI CTNAG 6 cut(s) 23, 364, 1604, 1736, 1853, 1877
DpnI GATC 6 cut(s) 655, 670, 708, 1059, 1419, 1896
DpnII GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
DraI TTTAAA 1 cut(s) 492
EaeI YGGCCR 1 cut(s) 2132
EagI CGGCCG 1 cut(s) 2132
Eam1104I CTCTTC 2 cut(s) 609, 1656
EarI CTCTTC 2 cut(s) 609, 1656
EciI GGCGGA 1 cut(s) 1808
Ecl136II GAGCTC 1 cut(s) 1666
EclXI CGGCCG 1 cut(s) 2132
Eco130I CCWWGG 1 cut(s) 1976
Eco24I GRGCYC 1 cut(s) 1668
Eco31I GGTCTC 2 cut(s) 365, 1986
Eco32I GATATC 1 cut(s) 1201
Eco52I CGGCCG 1 cut(s) 2132
Eco53kI GAGCTC 1 cut(s) 1666
Eco57I CTGAAG 1 cut(s) 2048
Eco88I CYCGRG 1 cut(s) 1844
Eco91I GGTNACC 1 cut(s) 1647
EcoICRI GAGCTC 1 cut(s) 1666
EcoO65I GGTNACC 1 cut(s) 1647
EcoRII CCWGG 3 cut(s) 1087, 1810, 2044
EcoRV GATATC 1 cut(s) 1201
EcoT14I CCWWGG 1 cut(s) 1976
EcoT22I ATGCAT 2 cut(s) 256, 705
EcoT38I GRGCYC 1 cut(s) 1668
ErhI CCWWGG 1 cut(s) 1976
Esp3I CGTCTC 2 cut(s) 1607, 1847
FaeI CATG 8 cut(s) 224, 254, 707, 1443, 1484, 1600, 1809, 1949
FalI AAGNNNNNCTT 3 cut(s) 38, 97, 129
FaqI GGGAC 1 cut(s) 1583
FatI CATG 8 cut(s) 220, 250, 703, 1439, 1480, 1596, 1805, 1945
FauI CCCGC 2 cut(s) 1660, 1928
FauNDI CATATG 1 cut(s) 1380
FblI GTMKAC 1 cut(s) 1243
Fnu4HI GCNGC 4 cut(s) 342, 834, 2132, 2135
FokI GGATG 8 cut(s) 77, 160, 267, 580, 866, 1397, 1466, 1693
FriOI GRGCYC 1 cut(s) 1668
Fsp4HI GCNGC 4 cut(s) 342, 834, 2132, 2135
FspBI CTAG 4 cut(s) 273, 1293, 1829, 2199
FspI TGCGCA 1 cut(s) 2179
GlaI GCGC 2 cut(s) 1049, 2179
GluI GCNGC 4 cut(s) 342, 834, 2132, 2135
GsuI CTGGAG 2 cut(s) 759, 2084
HaeIII GGCC 3 cut(s) 143, 1397, 2134
HapII CCGG 3 cut(s) 1229, 1556, 1784
HgaI GACGC 2 cut(s) 1178, 1589
HhaI GCGC 2 cut(s) 1050, 2180
Hin1II CATG 8 cut(s) 224, 254, 707, 1443, 1484, 1600, 1809, 1949
Hin6I GCGC 2 cut(s) 1048, 2178
HinP1I GCGC 2 cut(s) 1048, 2178
HincII GTYRAC 2 cut(s) 1742, 1993
HindII GTYRAC 2 cut(s) 1742, 1993
HpaII CCGG 3 cut(s) 1229, 1556, 1784
HphI GGTGA 4 cut(s) 635, 1322, 1516, 1528
Hpy166II GTNNAC 8 cut(s) 184, 974, 1034, 1101, 1244, 1313, 1742, 1993
Hpy188I TCNGA 3 cut(s) 1532, 1872, 1930
Hpy8I GTNNAC 8 cut(s) 184, 974, 1034, 1101, 1244, 1313, 1742, 1993
Hpy99I CGWCG 2 cut(s) 149, 2059
HpyAV CCTTC 6 cut(s) 1343, 1399, 1512, 1588, 1914, 2062
HpyCH4III ACNGT 2 cut(s) 190, 990
HpyCH4IV ACGT 1 cut(s) 1053
HpyF10VI GCNNNNNNNGC 5 cut(s) 251, 347, 1394, 2083, 2124
HpyF3I CTNAG 6 cut(s) 23, 364, 1604, 1736, 1853, 1877
HpySE526I ACGT 1 cut(s) 1053
Hsp92II CATG 8 cut(s) 224, 254, 707, 1443, 1484, 1600, 1809, 1949
HspAI GCGC 2 cut(s) 1048, 2178
Kpn2I TCCGGA 1 cut(s) 1555
Kzo9I GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
LguI GCTCTTC 2 cut(s) 609, 1656
LmnI GCTCC 2 cut(s) 1727, 1849
Lsp1109I GCAGC 1 cut(s) 328
LweI GCATC 8 cut(s) 182, 289, 1215, 1375, 1444, 1770, 2030, 2189
MabI ACCWGGT 1 cut(s) 1087
MaeI CTAG 4 cut(s) 273, 1293, 1829, 2199
MaeII ACGT 1 cut(s) 1053
MalI GATC 6 cut(s) 655, 670, 708, 1059, 1419, 1896
MbiI CCGCTC 1 cut(s) 1655
MboI GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
MboII GAAGA 9 cut(s) 236, 305, 323, 440, 626, 831, 1673, 1892, 2041
MfeI CAATTG 3 cut(s) 212, 1322, 2146
MflI RGATCY 1 cut(s) 1417
MhlI GDGCHC 2 cut(s) 186, 1668
MlyI GAGTC 7 cut(s) 103, 403, 779, 1565, 2009, 2081, 2158
MmeI TCCRAC 3 cut(s) 42, 738, 1608
Mph1103I ATGCAT 2 cut(s) 256, 705
MroI TCCGGA 1 cut(s) 1555
MroXI GAANNNNTTC 1 cut(s) 47
MslI CAYNNNNRTG 2 cut(s) 319, 1383
MspI CCGG 3 cut(s) 1229, 1556, 1784
MspR9I CCNGG 3 cut(s) 1089, 1812, 2046
MunI CAATTG 3 cut(s) 212, 1322, 2146
Mva1269I GAATGC 1 cut(s) 2129
MvaI CCWGG 3 cut(s) 1089, 1812, 2046
MvnI CGCG 1 cut(s) 2118
MwoI GCNNNNNNNGC 5 cut(s) 251, 347, 1394, 2083, 2124
NdeI CATATG 1 cut(s) 1380
NdeII GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
NlaIII CATG 8 cut(s) 224, 254, 707, 1443, 1484, 1600, 1809, 1949
NlaIV GGNNCC 2 cut(s) 1396, 1546
NmuCI GTSAC 4 cut(s) 148, 395, 648, 984
NotI GCGGCCGC 1 cut(s) 2132
NsbI TGCGCA 1 cut(s) 2179
NsiI ATGCAT 2 cut(s) 256, 705
NspI RCATGY 2 cut(s) 254, 1484
OliI CACNNNNGTG 1 cut(s) 319
PacI TTAATTAA 1 cut(s) 678
PaeR7I CTCGAG 1 cut(s) 1844
PciI ACATGT 1 cut(s) 1480
PciSI GCTCTTC 2 cut(s) 609, 1656
PctI GAATGC 1 cut(s) 2129
PdmI GAANNNNTTC 1 cut(s) 47
PfeI GAWTC 5 cut(s) 683, 1286, 1357, 1463, 2101
PflMI CCANNNNNTGG 1 cut(s) 1640
PkrI GCNGC 4 cut(s) 343, 835, 2133, 2136
PleI GAGTC 7 cut(s) 103, 402, 778, 1565, 2008, 2080, 2158
PpsI GAGTC 7 cut(s) 103, 402, 778, 1565, 2008, 2080, 2158
PscI ACATGT 1 cut(s) 1480
PshBI ATTAAT 2 cut(s) 674, 1182
Psp124BI GAGCTC 1 cut(s) 1668
Psp6I CCWGG 3 cut(s) 1087, 1810, 2044
PspEI GGTNACC 1 cut(s) 1647
PspGI CCWGG 3 cut(s) 1087, 1810, 2044
PspN4I GGNNCC 2 cut(s) 1396, 1546
PspPI GGNCC 1 cut(s) 1395
PstI CTGCAG 2 cut(s) 1075, 1165
PsuI RGATCY 1 cut(s) 1417
RsaI GTAC 3 cut(s) 1102, 1485, 1618
RsaNI GTAC 3 cut(s) 1101, 1484, 1617
RseI CAYNNNNRTG 2 cut(s) 319, 1383
SacI GAGCTC 1 cut(s) 1668
SapI GCTCTTC 2 cut(s) 609, 1656
SatI GCNGC 4 cut(s) 342, 834, 2132, 2135
Sau3AI GATC 6 cut(s) 653, 668, 706, 1057, 1417, 1894
Sau96I GGNCC 1 cut(s) 1395
SchI GAGTC 7 cut(s) 103, 403, 779, 1565, 2009, 2081, 2158
ScrFI CCNGG 3 cut(s) 1089, 1812, 2046
SduI GDGCHC 2 cut(s) 186, 1668
SexAI ACCWGGT 1 cut(s) 1087
SfaNI GCATC 8 cut(s) 182, 289, 1215, 1375, 1444, 1770, 2030, 2189
SfcI CTRYAG 3 cut(s) 85, 1071, 1161
Sfr274I CTCGAG 1 cut(s) 1844
SlaI CTCGAG 1 cut(s) 1844
SmiMI CAYNNNNRTG 2 cut(s) 319, 1383
SmlI CTYRAG 4 cut(s) 1757, 1844, 2096, 2140
SmoI CTYRAG 4 cut(s) 1757, 1844, 2096, 2140
SsiI CCGC 8 cut(s) 834, 1645, 1653, 1793, 1935, 2118, 2131, 2135
SspMI CTAG 4 cut(s) 273, 1293, 1829, 2199
SstI GAGCTC 1 cut(s) 1668
StyD4I CCNGG 3 cut(s) 1087, 1810, 2044
StyI CCWWGG 1 cut(s) 1976
TaaI ACNGT 2 cut(s) 190, 990
TaiI ACGT 1 cut(s) 1056
TaqI TCGA 4 cut(s) 1328, 1336, 1659, 1845
TatI WGTACW 2 cut(s) 1100, 1483
TauI GCSGC 3 cut(s) 836, 2134, 2137
TfiI GAWTC 5 cut(s) 683, 1286, 1357, 1463, 2101
TscAI CASTG 4 cut(s) 579, 993, 1075, 1210
TseFI GTSAC 4 cut(s) 148, 395, 648, 984
TseI GCWGC 1 cut(s) 341
Tsp45I GTSAC 4 cut(s) 148, 395, 648, 984
TspDTI ATGAA 7 cut(s) 237, 279, 654, 870, 1697, 1896, 1962
TspGWI ACGGA 3 cut(s) 1456, 1495, 2012
TspRI CASTG 4 cut(s) 579, 993, 1075, 1210
Van91I CCANNNNNTGG 1 cut(s) 1640
VneI GTGCAC 1 cut(s) 182
VspI ATTAAT 2 cut(s) 674, 1182
XapI RAATTY 4 cut(s) 536, 743, 839, 1685
XbaI TCTAGA 1 cut(s) 1828
XceI RCATGY 2 cut(s) 254, 1484
XcmI CCANNNNNNNNNTGG 2 cut(s) 202, 906
XhoI CTCGAG 1 cut(s) 1844
XmiI GTMKAC 1 cut(s) 1243
XmnI GAANNNNTTC 1 cut(s) 47
XspI CTAG 4 cut(s) 273, 1293, 1829, 2199
Zsp2I ATGCAT 2 cut(s) 256, 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.