Rroxscaffold_4G00328780

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
61852184 .. 61858332
6149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00328780.1

Sequence Viewer

Length: 1029 bp
ATGGCGGTTGAATTAGCGGGTGGATCTCTTCTATCCTCTTTTCTCTCTGTGTTGTTGGATGAAATTGCTTCTGTTGAGTTGGTTGACTTTATTCAGAGTCAGAAAAAAACACCTGGGCTGCTCAAAAAGTTGGAGATGGAGTTGCTGGCAGTCGATGAAGTGGTCGATCATGCTGAGGAGAGGCAGATCAGAGATTCAGCTGTGAGGGATTGGCTTGACGAGCTTACAGACACTCTCTGTCATGCTGAGGACCTGCTCGATGAGATCCGGACAGAGGCTCTGCGACGCAAGCTGGAAGGAGGTATATCTGGAGAGAGCAGCGCAACTCCTTTTGTGATTCCTGGTATTGACAGAAAGCTTGTAGGTATTGTTGAAAGATTAGATTTTATTTTGAACCGAATGGCGGCACTTGCTTTGAAAATCCGTGGCGTTAAAGATAGACCACGAGCAAGACTATCCACAGTTCCTCCTGGGGTAGAAGAAGGCTCTGGGATCTATGGAAGGGAAGAGGAGAAGGAGGCCATCATTAGATTGTTGCTGTCAGCTGATGAGACAGTTTATGGGATTGGTGTCATTCCTATTGTCGGCATGGGTGGGATCGGTAAAACAACCCTTGCTCAGCTTGTGTACAACGATGCCAGAGTGACGGAAGAGTTTCATCCCCGAGTTTGGGTTTCTGTTTCGCGTGGTTTTGATATTGTTAGAATAACACAGTCGATCTATGGGTCGATTTGTTCTCAAGCTTGTTTTAACACTAATTTGGATCTACTTCAATCTAAATTGAAAGCTGCTTTGGCTGGAAAGAAGTTTCTCATTGTTCTTGATGATGTTTGGAATAGGAATTATAATCAGTTGGAGTTCTTGAGAAGGCCGTTGGAATTTGGAGCACAAGGAAGTAAAATAATTGTCACAACACGGGATGAAAATGCTGCACATTTGATGGGTAGTCTTGAAGCTCACTGTCTGATGCCATTATCTGAGGACGATTGCTGGAAACTGTTTCCAGAGGGGTGCAGATCCACATCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

342

Amino Acids

37.88

Weight (kDa)

5.08

Isoelectric Point (pI)

31.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 99 9.2e-18 Rx N-terminal domain
NB-ARC PF00931 169 - 335 1e-34 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 846
Acc36I ACCTGC 1 cut(s) 261
AccII CGCG 1 cut(s) 685
AccIII TCCGGA 1 cut(s) 267
AciI CCGC 3 cut(s) 5, 17, 404
AclWI GGATC 6 cut(s) 31, 259, 500, 605, 771, 1011
AcsI RAATTY 1 cut(s) 878
AfaI GTAC 1 cut(s) 629
AfiI CCNNNNNNNGG 5 cut(s) 274, 403, 584, 669, 670
AgsI TTSAA 7 cut(s) 11, 374, 394, 418, 773, 784, 953
AjnI CCWGG 3 cut(s) 112, 340, 469
AjuI GAANNNNNNNTTGG 2 cut(s) 776, 808
AluBI AGCT 9 cut(s) 200, 223, 292, 358, 545, 622, 743, 788, 956
AluI AGCT 9 cut(s) 200, 223, 292, 358, 545, 622, 743, 788, 956
Alw21I GWGCWC 1 cut(s) 889
Alw26I GTCTC 1 cut(s) 545
AlwI GGATC 6 cut(s) 31, 259, 500, 605, 771, 1011
Ama87I CYCGRG 1 cut(s) 663
Aor13HI TCCGGA 1 cut(s) 267
AoxI GGCC 2 cut(s) 519, 869
ApeKI GCWGC 4 cut(s) 118, 318, 788, 929
ApoI RAATTY 1 cut(s) 878
Asp700I GAANNNNTTC 1 cut(s) 654
AspLEI GCGC 1 cut(s) 323
AspS9I GGNCC 1 cut(s) 250
AvaI CYCGRG 1 cut(s) 663
AvaII GGWCC 1 cut(s) 250
BauI CACGAG 1 cut(s) 444
Bbv12I GWGCWC 1 cut(s) 889
BbvCI CCTCAGC 2 cut(s) 174, 246
BbvI GCAGC 4 cut(s) 105, 330, 775, 916
BccI CCATC 3 cut(s) 130, 530, 934
BceAI ACGGC 1 cut(s) 856
BciT130I CCWGG 3 cut(s) 114, 342, 471
BcoDI GTCTC 1 cut(s) 545
BfuAI ACCTGC 1 cut(s) 261
BisI GCNGC 5 cut(s) 119, 319, 405, 789, 930
BlpI GCTNAGC 1 cut(s) 618
BlsI GCNGC 5 cut(s) 120, 320, 406, 790, 931
Bme1390I CCNGG 3 cut(s) 114, 342, 471
Bme18I GGWCC 1 cut(s) 250
BmeT110I CYCGRG 1 cut(s) 663
BmgT120I GGNCC 1 cut(s) 250
BmrFI CCNGG 3 cut(s) 114, 342, 471
BmsI GCATC 2 cut(s) 625, 957
BpmI CTGGAG 1 cut(s) 330
Bpu10I CCTNAGC 2 cut(s) 174, 246
Bpu1102I GCTNAGC 1 cut(s) 618
BpuEI CTTGAG 2 cut(s) 723, 883
BsaBI GATNNNNATC 1 cut(s) 1021
BsaJI CCNNGG 3 cut(s) 113, 424, 470
BsaWI WCCGGW 1 cut(s) 267
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 451, 481
Bsc4I CCNNNNNNNGG 5 cut(s) 274, 403, 584, 669, 670
Bse8I GATNNNNATC 1 cut(s) 1021
BseAI TCCGGA 1 cut(s) 267
BseBI CCWGG 3 cut(s) 114, 342, 471
BseDI CCNNGG 3 cut(s) 113, 424, 470
BseGI GGATG 3 cut(s) 64, 658, 925
BseJI GATNNNNATC 1 cut(s) 1021
BseLI CCNNNNNNNGG 5 cut(s) 274, 403, 584, 669, 670
BseMII CTCAG 4 cut(s) 165, 237, 632, 969
BseRI GAGGAG 2 cut(s) 191, 524
BseXI GCAGC 4 cut(s) 105, 330, 775, 916
BsgI GTGCAG 1 cut(s) 915
Bsh1236I CGCG 1 cut(s) 685
BshFI GGCC 2 cut(s) 521, 871
BsiHKAI GWGCWC 1 cut(s) 889
BsiHKCI CYCGRG 1 cut(s) 663
BsiSI CCGG 1 cut(s) 268
BslI CCNNNNNNNGG 5 cut(s) 274, 403, 584, 669, 670
BsmAI GTCTC 1 cut(s) 545
BsnI GGCC 2 cut(s) 521, 871
BsoBI CYCGRG 1 cut(s) 663
Bsp1286I GDGCHC 1 cut(s) 889
Bsp13I TCCGGA 1 cut(s) 267
Bsp1407I TGTACA 1 cut(s) 627
Bsp143I GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
Bsp1720I GCTNAGC 1 cut(s) 618
BspACI CCGC 3 cut(s) 5, 17, 404
BspANI GGCC 2 cut(s) 521, 871
BspCNI CTCAG 4 cut(s) 166, 238, 631, 970
BspEI TCCGGA 1 cut(s) 267
BspFNI CGCG 1 cut(s) 685
BspMI ACCTGC 1 cut(s) 261
BspPI GGATC 6 cut(s) 31, 259, 500, 605, 771, 1011
BsrGI TGTACA 1 cut(s) 627
BssECI CCNNGG 3 cut(s) 113, 424, 470
BssMI GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
BssSI CACGAG 1 cut(s) 444
Bst2BI CACGAG 1 cut(s) 444
Bst2UI CCWGG 3 cut(s) 114, 342, 471
Bst4CI ACNGT 5 cut(s) 463, 556, 714, 962, 999
Bst6I CTCTTC 3 cut(s) 33, 501, 645
BstAUI TGTACA 1 cut(s) 627
BstC8I GCNNGC 2 cut(s) 147, 290
BstDEI CTNAG 4 cut(s) 174, 246, 618, 978
BstDSI CCRYGG 1 cut(s) 424
BstF5I GGATG 3 cut(s) 64, 658, 925
BstFNI CGCG 1 cut(s) 685
BstHHI GCGC 1 cut(s) 323
BstKTI GATC 9 cut(s) 26, 169, 189, 267, 495, 600, 720, 766, 1019
BstMAI GTCTC 1 cut(s) 545
BstMBI GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
BstMWI GCNNNNNNNGC 4 cut(s) 220, 289, 410, 794
BstNI CCWGG 3 cut(s) 114, 342, 471
BstSCI CCNGG 3 cut(s) 112, 340, 469
BstUI CGCG 1 cut(s) 685
BstV1I GCAGC 4 cut(s) 105, 330, 775, 916
BstX2I RGATCY 5 cut(s) 23, 264, 492, 763, 1016
BstYI RGATCY 5 cut(s) 23, 264, 492, 763, 1016
BsuRI GGCC 2 cut(s) 521, 871
BtgI CCRYGG 1 cut(s) 424
BtsCI GGATG 3 cut(s) 64, 658, 925
BtsIMutI CAGTG 1 cut(s) 958
BveI ACCTGC 1 cut(s) 261
Cac8I GCNNGC 2 cut(s) 147, 290
CfoI GCGC 1 cut(s) 323
Cfr13I GGNCC 1 cut(s) 250
CseI GACGC 1 cut(s) 294
Csp6I GTAC 1 cut(s) 628
CviAII CATG 3 cut(s) 170, 242, 589
CviQI GTAC 1 cut(s) 628
DdeI CTNAG 4 cut(s) 174, 246, 618, 978
DpnI GATC 9 cut(s) 25, 168, 188, 266, 494, 599, 719, 765, 1018
DpnII GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
Eam1104I CTCTTC 3 cut(s) 33, 501, 645
EarI CTCTTC 3 cut(s) 33, 501, 645
Eco47I GGWCC 1 cut(s) 250
Eco88I CYCGRG 1 cut(s) 663
EcoO109I RGGNCCY 1 cut(s) 250
EcoRII CCWGG 3 cut(s) 112, 340, 469
FaeI CATG 3 cut(s) 173, 245, 592
FaiI YATR 8 cut(s) 171, 243, 305, 498, 561, 590, 723, 846
FatI CATG 3 cut(s) 169, 241, 588
FauI CCCGC 1 cut(s) 10
Fnu4HI GCNGC 5 cut(s) 119, 319, 405, 789, 930
FokI GGATG 3 cut(s) 71, 645, 932
Fsp4HI GCNGC 5 cut(s) 119, 319, 405, 789, 930
GlaI GCGC 1 cut(s) 322
GluI GCNGC 5 cut(s) 119, 319, 405, 789, 930
GsuI CTGGAG 1 cut(s) 330
HaeIII GGCC 2 cut(s) 521, 871
HapII CCGG 1 cut(s) 268
HgaI GACGC 1 cut(s) 294
HhaI GCGC 1 cut(s) 323
Hin1II CATG 3 cut(s) 173, 245, 592
Hin6I GCGC 1 cut(s) 321
HinP1I GCGC 1 cut(s) 321
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HindIII AAGCTT 2 cut(s) 356, 741
HinfI GANTC 3 cut(s) 97, 194, 337
HpaII CCGG 1 cut(s) 268
Hpy166II GTNNAC 2 cut(s) 85, 628
Hpy188I TCNGA 5 cut(s) 96, 102, 191, 966, 979
Hpy188III TCNNGA 7 cut(s) 268, 309, 821, 862, 950, 1004, 1026
Hpy8I GTNNAC 2 cut(s) 85, 628
Hpy99I CGWCG 1 cut(s) 288
HpyAV CCTTC 5 cut(s) 290, 476, 495, 508, 861
HpyCH4III ACNGT 5 cut(s) 463, 556, 714, 962, 999
HpyCH4V TGCA 2 cut(s) 932, 1014
HpyF10VI GCNNNNNNNGC 4 cut(s) 220, 289, 410, 794
HpyF3I CTNAG 4 cut(s) 174, 246, 618, 978
Hsp92II CATG 3 cut(s) 173, 245, 592
HspAI GCGC 1 cut(s) 321
Kpn2I TCCGGA 1 cut(s) 267
Kzo9I GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
LmnI GCTCC 1 cut(s) 884
Lsp1109I GCAGC 4 cut(s) 105, 330, 775, 916
LweI GCATC 2 cut(s) 625, 957
MaeIII GTNAC 2 cut(s) 643, 907
MalI GATC 9 cut(s) 25, 168, 188, 266, 494, 599, 719, 765, 1018
MboI GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
MboII GAAGA 4 cut(s) 20, 491, 518, 662
MflI RGATCY 5 cut(s) 23, 264, 492, 763, 1016
MhlI GDGCHC 1 cut(s) 889
MluCI AATT 7 cut(s) 11, 63, 757, 779, 841, 878, 903
MlyI GAGTC 1 cut(s) 106
MmeI TCCRAC 4 cut(s) 36, 111, 834, 855
MroI TCCGGA 1 cut(s) 267
MroXI GAANNNNTTC 1 cut(s) 654
MseI TTAA 2 cut(s) 432, 750
MspA1I CMGCKG 2 cut(s) 200, 545
MspI CCGG 1 cut(s) 268
MspR9I CCNGG 3 cut(s) 114, 342, 471
MvaI CCWGG 3 cut(s) 114, 342, 471
MvnI CGCG 1 cut(s) 685
MwoI GCNNNNNNNGC 4 cut(s) 220, 289, 410, 794
NdeII GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
NlaIII CATG 3 cut(s) 173, 245, 592
NmuCI GTSAC 2 cut(s) 643, 907
PdmI GAANNNNTTC 1 cut(s) 654
PfeI GAWTC 2 cut(s) 194, 337
PkrI GCNGC 5 cut(s) 120, 320, 406, 790, 931
PleI GAGTC 1 cut(s) 105
PpsI GAGTC 1 cut(s) 105
PpuMI RGGWCCY 1 cut(s) 250
PsiI TTATAA 1 cut(s) 846
Psp5II RGGWCCY 1 cut(s) 250
Psp6I CCWGG 3 cut(s) 112, 340, 469
PspGI CCWGG 3 cut(s) 112, 340, 469
PspPI GGNCC 1 cut(s) 250
PspPPI RGGWCCY 1 cut(s) 250
PsuI RGATCY 5 cut(s) 23, 264, 492, 763, 1016
PvuII CAGCTG 2 cut(s) 200, 545
RsaI GTAC 1 cut(s) 629
RsaNI GTAC 1 cut(s) 628
SaqAI TTAA 2 cut(s) 432, 750
SatI GCNGC 5 cut(s) 119, 319, 405, 789, 930
Sau3AI GATC 9 cut(s) 23, 166, 186, 264, 492, 597, 717, 763, 1016
Sau96I GGNCC 1 cut(s) 250
SchI GAGTC 1 cut(s) 106
ScrFI CCNGG 3 cut(s) 114, 342, 471
SduI GDGCHC 1 cut(s) 889
SfaNI GCATC 2 cut(s) 625, 957
SinI GGWCC 1 cut(s) 250
SmlI CTYRAG 2 cut(s) 738, 862
SmoI CTYRAG 2 cut(s) 738, 862
Sse9I AATT 7 cut(s) 11, 63, 757, 779, 841, 878, 903
SsiI CCGC 3 cut(s) 5, 17, 404
StyD4I CCNGG 3 cut(s) 112, 340, 469
TaaI ACNGT 5 cut(s) 463, 556, 714, 962, 999
TaqI TCGA 5 cut(s) 153, 165, 258, 716, 728
TasI AATT 7 cut(s) 11, 63, 757, 779, 841, 878, 903
TatI WGTACW 1 cut(s) 627
TauI GCSGC 1 cut(s) 407
TfiI GAWTC 2 cut(s) 194, 337
Tru1I TTAA 2 cut(s) 432, 750
Tru9I TTAA 2 cut(s) 432, 750
TscAI CASTG 1 cut(s) 965
TseFI GTSAC 2 cut(s) 643, 907
TseI GCWGC 4 cut(s) 118, 318, 788, 929
Tsp45I GTSAC 2 cut(s) 643, 907
TspDTI ATGAA 4 cut(s) 75, 171, 647, 936
TspGWI ACGGA 2 cut(s) 413, 662
TspRI CASTG 1 cut(s) 965
VpaK11BI GGWCC 1 cut(s) 250
XapI RAATTY 1 cut(s) 878
XmnI GAANNNNTTC 1 cut(s) 654
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.