RchiOBHm_Chr1g0342461

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
34355784 .. 34359750
3967 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56908

Sequence Viewer

Length: 1158 bp
ATGCATGACCTTATCAATGATTTAGCAAGCTTTGTATTTGTAGAATTTTGTTTTAGGTGGGAGGGCAGTAATTCACCCAACAGTTTGAGCAAGACTAGTCATTTTTCAGATATGCCAGAATATCATTATCATGATGAAGCTGATAGTGTAGAGATATTTGAGGCTTTACAGCAAGATAAATGTTTGCGCACCTTTCTACTATTAGAACCACGTTGTTTGTTGAACTTGAACAAAGGACGATGTGATATATTGCCAAAATCACAATGTTTAAGGGTGCTCAATTTATATAAGTACAATATCAAGGAATTGCCTGATACAATTAACGACTTGAGACGTCTTAGGTACTTGGACTTGTCTTGGACTCCCATCAAAAAGTTACCTGATACAATTTGTACTTTGTATAACTTGCAAGTATTGTTGTTGTCAAACTGTCGAGGCCTTACTGAACTGCCAGCCAACTTGGGAAGATTGATCAACTTGAGCCATCTGGATATTACAGAGACAAAGTTAAAAAAGATGCCACCACAAATGGGTAAGTTGAAGGACCTCCAGATGCTACCAGAGTTTGTGCTAGACAAACACAATGCTGGGGAGAATTTGGCAGAGTTAAAGAAGCTTGAAAAATTGCGTGGAAGACTTTGTATCTCAGGGCTGGTGCATAGCAGCGGTTTGGAGGCCTACATACTGAGGAACAAGAAGTTTCTTAAGGAACTGGTTTTGGATTGGAGAGGAAGGGATTTAAGTGAAAAAGGCAATAATATTGTAGAAGAAAGAGAAGTGCTTGAGAAGCTCCAACCTCACCTGAACTTGGAAAGGCTTACAATTAAAGGTTATGGAGGCAAAATGTTTCCAGGTTCTGAATTCTATTATGGTGACGGCAACACTAGTACTTGTGTGAGGAAGCCATTCAGATGTCTGCAGTCTTTAAAATTCTACAGTATGAGTGGGTGGCAAGAATGGTCTTATGTTGGAGGTGACTATAATGAAGGTGGGGTTTTTCCTAATCTTGTTCGACTTGAAGTATCAGGGTGTCCCAATCTTACCGGGAGATTAGCGTCAGAAATTCTCACATCTCTTGTGTGTGTGTCGGTATCGTATTGCCCAGAATTCGAATGTATTCCGGAAGGGGGATTCCCGTCAAAAGTTAAAATCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

385

Amino Acids

44.09

Weight (kDa)

7.48

Isoelectric Point (pI)

50.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 85 - 213 9.2e-20 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 200 - 342 3.8e-19 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 337
Acc16I TGCGCA 1 cut(s) 188
AccIII TCCGGA 1 cut(s) 1120
AciI CCGC 1 cut(s) 666
AcsI RAATTY 6 cut(s) 44, 595, 860, 929, 1062, 1106
AcyI GRCGYC 1 cut(s) 334
AfaI GTAC 4 cut(s) 293, 344, 394, 889
AfiI CCNNNNNNNGG 3 cut(s) 530, 808, 1127
AflII CTTAAG 1 cut(s) 704
AgsI TTSAA 5 cut(s) 223, 229, 541, 620, 1019
AhlI ACTAGT 2 cut(s) 95, 884
AjnI CCWGG 1 cut(s) 850
AluBI AGCT 4 cut(s) 30, 140, 616, 790
AluI AGCT 4 cut(s) 30, 140, 616, 790
Alw21I GWGCWC 1 cut(s) 279
Alw26I GTCTC 2 cut(s) 325, 494
AlwNI CAGNNNCTG 1 cut(s) 857
Aor13HI TCCGGA 1 cut(s) 1120
AoxI GGCC 2 cut(s) 436, 675
ApeKI GCWGC 1 cut(s) 663
ApoI RAATTY 6 cut(s) 44, 595, 860, 929, 1062, 1106
Asp700I GAANNNNTTC 2 cut(s) 905, 1116
AspLEI GCGC 1 cut(s) 189
AspS9I GGNCC 1 cut(s) 544
AsuC2I CCSGG 1 cut(s) 1045
AsuHPI GGTGA 4 cut(s) 66, 791, 884, 986
AsuII TTCGAA 1 cut(s) 1110
AvaII GGWCC 1 cut(s) 544
BbsI GAAGAC 1 cut(s) 640
Bbv12I GWGCWC 1 cut(s) 279
BbvI GCAGC 1 cut(s) 675
BccI CCATC 2 cut(s) 374, 492
BceAI ACGGC 1 cut(s) 892
BciT130I CCWGG 1 cut(s) 852
BclI TGATCA 1 cut(s) 471
BcnI CCSGG 1 cut(s) 1045
BcoDI GTCTC 2 cut(s) 325, 494
BcuI ACTAGT 2 cut(s) 95, 884
BfaI CTAG 3 cut(s) 96, 572, 885
BfmI CTRYAG 2 cut(s) 917, 934
BfrI CTTAAG 1 cut(s) 704
BisI GCNGC 1 cut(s) 664
BlsI GCNGC 1 cut(s) 665
BmcAI AGTACT 1 cut(s) 889
Bme1390I CCNGG 2 cut(s) 852, 1045
Bme18I GGWCC 1 cut(s) 544
BmgT120I GGNCC 1 cut(s) 544
BmrFI CCNGG 2 cut(s) 852, 1045
BmsI GCATC 2 cut(s) 507, 543
BpiI GAAGAC 1 cut(s) 640
BpmI CTGGAG 1 cut(s) 533
Bpu14I TTCGAA 1 cut(s) 1110
BpuEI CTTGAG 3 cut(s) 349, 499, 803
BpuMI CCSGG 1 cut(s) 1045
BsaHI GRCGYC 1 cut(s) 334
BsaWI WCCGGW 1 cut(s) 1120
Bsc4I CCNNNNNNNGG 3 cut(s) 530, 808, 1127
Bse1I ACTGG 1 cut(s) 717
BseAI TCCGGA 1 cut(s) 1120
BseBI CCWGG 1 cut(s) 852
BseLI CCNNNNNNNGG 3 cut(s) 530, 808, 1127
BseMII CTCAG 2 cut(s) 660, 677
BseNI ACTGG 1 cut(s) 717
BseXI GCAGC 1 cut(s) 675
BseYI CCCAGC 1 cut(s) 587
BshFI GGCC 2 cut(s) 438, 677
BsiHKAI GWGCWC 1 cut(s) 279
BsiSI CCGG 2 cut(s) 1044, 1121
BslFI GGGAC 1 cut(s) 1017
BslI CCNNNNNNNGG 3 cut(s) 530, 808, 1127
BsmAI GTCTC 2 cut(s) 325, 494
BsmBI CGTCTC 1 cut(s) 325
BsmFI GGGAC 1 cut(s) 1017
BsnI GGCC 2 cut(s) 438, 677
Bsp119I TTCGAA 1 cut(s) 1110
Bsp1286I GDGCHC 1 cut(s) 279
Bsp13I TCCGGA 1 cut(s) 1120
Bsp143I GATC 1 cut(s) 471
BspACI CCGC 1 cut(s) 666
BspANI GGCC 2 cut(s) 438, 677
BspCNI CTCAG 2 cut(s) 659, 678
BspEI TCCGGA 1 cut(s) 1120
BspHI TCATGA 1 cut(s) 130
BspMAI CTGCAG 1 cut(s) 921
BspT104I TTCGAA 1 cut(s) 1110
BspTI CTTAAG 1 cut(s) 704
BsrI ACTGG 1 cut(s) 717
BssMI GATC 1 cut(s) 471
BssNI GRCGYC 1 cut(s) 334
Bst2UI CCWGG 1 cut(s) 852
Bst4CI ACNGT 3 cut(s) 83, 431, 938
BstACI GRCGYC 1 cut(s) 334
BstAFI CTTAAG 1 cut(s) 704
BstBI TTCGAA 1 cut(s) 1110
BstC8I GCNNGC 2 cut(s) 28, 453
BstDEI CTNAG 3 cut(s) 338, 646, 686
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 1 cut(s) 474
BstMAI GTCTC 2 cut(s) 325, 494
BstMBI GATC 1 cut(s) 471
BstMWI GCNNNNNNNGC 1 cut(s) 787
BstNI CCWGG 1 cut(s) 852
BstSCI CCNGG 2 cut(s) 850, 1043
BstSFI CTRYAG 2 cut(s) 917, 934
BstV1I GCAGC 1 cut(s) 675
BstV2I GAAGAC 1 cut(s) 640
BsuRI GGCC 2 cut(s) 438, 677
Cac8I GCNNGC 2 cut(s) 28, 453
CaiI CAGNNNCTG 1 cut(s) 857
CciI TCATGA 1 cut(s) 130
CfoI GCGC 1 cut(s) 189
Cfr13I GGNCC 1 cut(s) 544
CseI GACGC 1 cut(s) 1044
Csp6I GTAC 4 cut(s) 292, 343, 393, 888
CspCI CAANNNNNGTGG 2 cut(s) 198, 233
CviAII CATG 2 cut(s) 5, 131
CviQI GTAC 4 cut(s) 292, 343, 393, 888
DdeI CTNAG 3 cut(s) 338, 646, 686
DpnI GATC 1 cut(s) 473
DpnII GATC 1 cut(s) 471
DraI TTTAAA 1 cut(s) 927
Eco147I AGGCCT 2 cut(s) 438, 677
Eco47I GGWCC 1 cut(s) 544
EcoO109I RGGNCCY 1 cut(s) 544
EcoRI GAATTC 2 cut(s) 860, 1106
EcoRII CCWGG 1 cut(s) 850
EcoT22I ATGCAT 1 cut(s) 6
Esp3I CGTCTC 1 cut(s) 325
FaeI CATG 2 cut(s) 8, 134
FaqI GGGAC 1 cut(s) 1017
FatI CATG 2 cut(s) 4, 130
FbaI TGATCA 1 cut(s) 471
Fnu4HI GCNGC 1 cut(s) 664
Fsp4HI GCNGC 1 cut(s) 664
FspBI CTAG 3 cut(s) 96, 572, 885
FspI TGCGCA 1 cut(s) 188
GlaI GCGC 1 cut(s) 188
GluI GCNGC 1 cut(s) 664
GsaI CCCAGC 1 cut(s) 591
GsuI CTGGAG 1 cut(s) 533
HaeIII GGCC 2 cut(s) 438, 677
HapII CCGG 2 cut(s) 1044, 1121
HgaI GACGC 1 cut(s) 1044
HhaI GCGC 1 cut(s) 189
Hin1I GRCGYC 1 cut(s) 334
Hin1II CATG 2 cut(s) 8, 134
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HindIII AAGCTT 2 cut(s) 28, 614
HinfI GANTC 2 cut(s) 361, 1131
HpaII CCGG 2 cut(s) 1044, 1121
HphI GGTGA 4 cut(s) 66, 791, 884, 986
Hpy188I TCNGA 4 cut(s) 109, 859, 911, 1060
Hpy188III TCNNGA 4 cut(s) 131, 488, 550, 1121
HpyAV CCTTC 4 cut(s) 535, 726, 980, 1118
HpyCH4III ACNGT 3 cut(s) 83, 431, 938
HpyCH4IV ACGT 2 cut(s) 211, 334
HpyCH4V TGCA 4 cut(s) 4, 409, 658, 919
HpyF10VI GCNNNNNNNGC 1 cut(s) 787
HpyF3I CTNAG 3 cut(s) 338, 646, 686
HpySE526I ACGT 2 cut(s) 211, 334
Hsp92I GRCGYC 1 cut(s) 334
Hsp92II CATG 2 cut(s) 8, 134
HspAI GCGC 1 cut(s) 187
Kpn2I TCCGGA 1 cut(s) 1120
Ksp22I TGATCA 1 cut(s) 471
Kzo9I GATC 1 cut(s) 471
LmnI GCTCC 1 cut(s) 795
Lsp1109I GCAGC 1 cut(s) 675
LweI GCATC 2 cut(s) 507, 543
MaeI CTAG 3 cut(s) 96, 572, 885
MaeII ACGT 2 cut(s) 211, 334
MaeIII GTNAC 3 cut(s) 375, 872, 974
MalI GATC 1 cut(s) 473
MboI GATC 1 cut(s) 471
MboII GAAGA 3 cut(s) 477, 645, 779
MhlI GDGCHC 1 cut(s) 279
MlyI GAGTC 1 cut(s) 355
MmeI TCCRAC 2 cut(s) 817, 949
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1120
MroXI GAANNNNTTC 2 cut(s) 905, 1116
MseI TTAA 9 cut(s) 269, 321, 509, 608, 705, 740, 825, 926, 1146
MslI CAYNNNNRTG 2 cut(s) 129, 910
MspA1I CMGCKG 1 cut(s) 666
MspCI CTTAAG 1 cut(s) 704
MspI CCGG 2 cut(s) 1044, 1121
MspR9I CCNGG 2 cut(s) 852, 1045
MvaI CCWGG 1 cut(s) 852
MwoI GCNNNNNNNGC 1 cut(s) 787
NciI CCSGG 1 cut(s) 1045
NdeII GATC 1 cut(s) 471
NlaIII CATG 2 cut(s) 8, 134
NmuCI GTSAC 2 cut(s) 872, 974
NsbI TGCGCA 1 cut(s) 188
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 1110
PagI TCATGA 1 cut(s) 130
PceI AGGCCT 2 cut(s) 438, 677
PdmI GAANNNNTTC 2 cut(s) 905, 1116
PfeI GAWTC 1 cut(s) 1131
PkrI GCNGC 1 cut(s) 665
PleI GAGTC 1 cut(s) 355
PpsI GAGTC 1 cut(s) 355
PpuMI RGGWCCY 1 cut(s) 544
Psp5II RGGWCCY 1 cut(s) 544
Psp6I CCWGG 1 cut(s) 850
PspFI CCCAGC 1 cut(s) 587
PspGI CCWGG 1 cut(s) 850
PspPI GGNCC 1 cut(s) 544
PspPPI RGGWCCY 1 cut(s) 544
PstI CTGCAG 1 cut(s) 921
PstNI CAGNNNCTG 1 cut(s) 857
RsaI GTAC 4 cut(s) 293, 344, 394, 889
RsaNI GTAC 4 cut(s) 292, 343, 393, 888
RseI CAYNNNNRTG 2 cut(s) 129, 910
SaqAI TTAA 9 cut(s) 269, 321, 509, 608, 705, 740, 825, 926, 1146
SatI GCNGC 1 cut(s) 664
Sau3AI GATC 1 cut(s) 471
Sau96I GGNCC 1 cut(s) 544
ScaI AGTACT 1 cut(s) 889
SchI GAGTC 1 cut(s) 355
ScrFI CCNGG 2 cut(s) 852, 1045
SduI GDGCHC 1 cut(s) 279
SfaNI GCATC 2 cut(s) 507, 543
SfcI CTRYAG 2 cut(s) 917, 934
SfuI TTCGAA 1 cut(s) 1110
SinI GGWCC 1 cut(s) 544
SmiMI CAYNNNNRTG 2 cut(s) 129, 910
SmlI CTYRAG 4 cut(s) 328, 478, 704, 782
SmoI CTYRAG 4 cut(s) 328, 478, 704, 782
SpeI ACTAGT 2 cut(s) 95, 884
SseBI AGGCCT 2 cut(s) 438, 677
SsiI CCGC 1 cut(s) 666
SspI AATATT 1 cut(s) 760
SspMI CTAG 3 cut(s) 96, 572, 885
StuI AGGCCT 2 cut(s) 438, 677
StyD4I CCNGG 2 cut(s) 850, 1043
TaaI ACNGT 3 cut(s) 83, 431, 938
TaiI ACGT 2 cut(s) 214, 337
TaqI TCGA 3 cut(s) 433, 1012, 1110
TatI WGTACW 3 cut(s) 291, 392, 887
TfiI GAWTC 1 cut(s) 1131
Tru1I TTAA 9 cut(s) 269, 321, 509, 608, 705, 740, 825, 926, 1146
Tru9I TTAA 9 cut(s) 269, 321, 509, 608, 705, 740, 825, 926, 1146
TseFI GTSAC 2 cut(s) 872, 974
TseI GCWGC 1 cut(s) 663
Tsp45I GTSAC 2 cut(s) 872, 974
TspDTI ATGAA 2 cut(s) 150, 999
Vha464I CTTAAG 1 cut(s) 704
VpaK11BI GGWCC 1 cut(s) 544
XapI RAATTY 6 cut(s) 44, 595, 860, 929, 1062, 1106
XmnI GAANNNNTTC 2 cut(s) 905, 1116
XspI CTAG 3 cut(s) 96, 572, 885
ZraI GACGTC 1 cut(s) 335
ZrmI AGTACT 1 cut(s) 889
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.