RchiOBHm_Chr1g0347751

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
40422598 .. 40425229
2632 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57385

Sequence Viewer

Length: 2547 bp
ATGAAGAAGTTGTCATTTAGTAACACTGTTCTGGATGACAGCGAGGGGAAGCAACTTAATAACCCAGCTGTGAAGGACTGGCTCAGTGATCTTAAAGAATCTGTCTATGATGCAGACGATCTGTTGCAGGAGATCAACACAGAAGTGTTAAGGCAAAAGATGGAGCCCGAATTGGAAAGTAGCTTGAGTAAGGTACAGGAGCTTATTTATACTCCTCCATCTCATGCTTTTGACTCAGCATTAATGAACTCCAGGGTAGAGGAAGTTTGTAACAAACTAGACTTCATTATGAAGCAGCGAAAAGATGTCCTGGGTTCGGAAGCAATTGCTGAACACCGAGTGTCACAAACAATACCTTCAACTTGTTTGGTAGACGACTCCAGTGTGTATGGAAGAGATGACGAGAAGGATACCTTCACTAAGTTATTGCTATCAGATGATGAGAAGCTAAGTGTAATTCCTATTGTGGGCATGGGTGGAATCGGAAAGACCACCCTTGCCCAGCTTCTATACAACGATGTCAGAGTTAAAGAGCATTTTGACCTCCACGCATGGGCATGTGTTTCGGAAGAATTTGATGTCCTTAGGATCTATCAACAGATTTATGAGTCACTCACTTCAGATGCTTGCCAAATCCTTACTCTGAATCTGCTTCAGTCAAAGTTGAAGGAAGCTTTGGTGGGAAAAAAGTTTTTAGTTGTTCTCGATGACATCTGGAACAAGAATTATAATCGGTGGGATTTCTTAAGGCTTCCCTTTAAATTTGGAGCACATGGAAGTAAGATTATTGTCACAACACGCAATGAGGATGTTGCAAGTATGATGGGTACTCTTTCACCTCAACCTGACTATCTAATGCCAATATCTGAGGAAGAAAGCTGGTTGTTATTTGAAAAACATGCCTTCAAAAGTAGAGGAGTTACTGGACACTCGCAGCTTGAAGAAATAGGAAGACAAATTGTAAGAAAGTGCAATGGTCTTCCTTTGGCCATTAAATCCCTTGGGGGTCTCTTATGTTCTAAACTATTTTCCGAGGAATGGGAAAGCATATTGGACAGTGACATGTGGGTATTGACACAGGAGGAGACTGACATTCTGCCATCTCTTTGGTTGAGCTATCTGTATTTGCCTCCACATCTCAAGCTTTGTTTTAGCTACTGTGCGATATTTCCCAAGAGTTATCGACTTCAAAAATTAGAGCTGGTTTTATTGTGGAAGGCCCAGGGTCTCTTGCAACCCAAAAAGAACAAAATGATAGAAGAAGTTGGGGAAGAGTACTTTAATGATCTAATCTCAAGGTCATTTTTCCAACGGTCATCAAGTTCTGCACACTTCATCATGCATGACCTTATTTATGATTTAGCAAATTTTGTATCTGGAGAATTTTCTGTTAGGTGGGAGAATAGTGAATCACCCAACATTTTGAGGAAGACTCGTCATTTCTCATATATGGAGAAACATGGTGATAGCTTTGCAAAACTTGAGGCTATAAGTCAAGCTAAATATTTGCGCACTCTTCTACCTGTACCTGAATATGCATGCTATCTGGGGACATTCAATAAAGAGAAATTCCAAGAAGTACTATTTGAGGTATTGCCAAAACTACAATGTTTAAGAGTGTTGAATTTATCATTGTATGATATTAAGGAATTGCCTGATTCGATTAACAACATGAAACATCTAAGGCACTTGGACATGTCTGAAACTCCCATTAGAAAGTTACCTGATACAATTTGTACTCTGTATAATTTGCAAGCAATATTGTTGCGCAAGTGTCGAATTCTTACTGAACTGCCAGACAACTTGGGAAGATTGATCAATTTGAGCCATCTGGATATTACACAGACAAAGTTAAAAAAGATGCCACCACAAATGGGTAAGTTGAAAGACCTCCAGATGCTACCAGAGTTTGTGCTAGACGAACACACTGGGGATAATTTGGCGGAGTTAAAGAAGCTTGAAAAATTGCGTGGAACACTTCGTATCTCAGGGCTTGTGCATAGCAGCGGTTTGGAGGCCTACATGCTGAGGGACAAGACGTATCTTAAGGAACTGGTTTTGGATTGGAGAGGAAGGGATTCAAGTGAAGAAGGCAATAATACTGTAGAAGAAAGAGAAGTGCTTGAGAAGCTCCAACCTCACCTGAACCTGGGGAGGCTTACAATTAAAGGTTATGGAGGCGAAATGTTTCCAGGTTGGTCAGGATATTATTCTTCCTCTGCTCTTGTTTATCTTATACTTGAAAATTGTGTGAACTGTATCTCCTTGCCACCATTGGGACAGCTACCTTCCCTCAGAGAGCTTGATATTTCTGGGTTACATGGAGTGGTGTCCATAGGTTCTGAATTCTATTATGGTGACGGCAATACTACTACTCGTGTCAATAAACCATTTAGATCTCTACAGTATTTACAATTCTACAATATGAGTGGGTGGCAAGAATGGTCTTATGTTGGAGGTGACAATAATGAAGGTGGGGTTTTTCCTAATCTTTTTCAACTTGAAAATTCGAATGTTTTCCGGAAGATGGATTCCCGTCAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

848

Amino Acids

97.29

Weight (kDa)

5.61

Isoelectric Point (pI)

51.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 2 - 57 2.9e-12 Rx N-terminal domain
NB-ARC PF00931 135 - 304 6.6e-38 NB-ARC domain
WHD_DRP PF23559 389 - 455 5.1e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 530 - 811 1.6e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 647 - 772 2.2e-31 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 729
Acc16I TGCGCA 2 cut(s) 1511, 1769
AccI GTMKAC 1 cut(s) 372
AccIII TCCGGA 1 cut(s) 2520
AciI CCGC 2 cut(s) 1943, 2007
AclWI GGATC 1 cut(s) 596
AcoI YGGCCR 1 cut(s) 987
AcsI RAATTY 9 cut(s) 572, 761, 1366, 1382, 1568, 1624, 1779, 2345, 2506
AcuI CTGAAG 2 cut(s) 603, 638
AdeI CACNNNGTG 1 cut(s) 340
AfaI GTAC 6 cut(s) 195, 829, 1277, 1527, 1581, 1738
AfiI CCNNNNNNNGG 8 cut(s) 316, 467, 553, 1038, 1874, 2149, 2276, 2527
AflII CTTAAG 2 cut(s) 745, 2045
AflIII ACRYGT 2 cut(s) 1062, 1695
AjnI CCWGG 5 cut(s) 251, 309, 1221, 2148, 2191
AjuI GAANNNNNNNTTGG 2 cut(s) 659, 691
AleI CACNNNNGTG 1 cut(s) 143
AloI GAACNNNNNNTCC 2 cut(s) 2246, 2278
Alw21I GWGCWC 1 cut(s) 772
Alw26I GTCTC 3 cut(s) 1013, 1079, 1232
AlwI GGATC 1 cut(s) 596
Aor13HI TCCGGA 1 cut(s) 2520
AoxI GGCC 3 cut(s) 987, 1218, 2016
ApeKI GCWGC 3 cut(s) 295, 934, 2004
ApoI RAATTY 9 cut(s) 572, 761, 1366, 1382, 1568, 1624, 1779, 2345, 2506
AseI ATTAAT 1 cut(s) 242
Asp700I GAANNNNTTC 3 cut(s) 2077, 2187, 2516
AspLEI GCGC 2 cut(s) 1512, 1770
AspS9I GGNCC 1 cut(s) 1219
AsuHPI GGTGA 6 cut(s) 828, 1404, 1475, 2132, 2369, 2471
AsuII TTCGAA 1 cut(s) 2510
AxyI CCTNAGG 1 cut(s) 584
BalI TGGCCA 1 cut(s) 989
BanII GRGCYC 1 cut(s) 168
BauI CACGAG 1 cut(s) 2376
BbsI GAAGAC 3 cut(s) 958, 971, 1436
Bbv12I GWGCWC 1 cut(s) 772
BbvCI CCTCAGC 1 cut(s) 2027
BbvI GCAGC 3 cut(s) 307, 946, 2016
BccI CCATC 6 cut(s) 154, 226, 817, 1108, 1836, 2521
BceAI ACGGC 1 cut(s) 2377
BcgI CGANNNNNNTGC 2 cut(s) 546, 580
BciT130I CCWGG 5 cut(s) 253, 311, 1223, 2150, 2193
BciVI GTATCC 1 cut(s) 403
BclI TGATCA 1 cut(s) 1815
BcoDI GTCTC 3 cut(s) 1013, 1079, 1232
BfaI CTAG 2 cut(s) 278, 1916
BfmI CTRYAG 2 cut(s) 2103, 2402
BfrI CTTAAG 2 cut(s) 745, 2045
BfuI GTATCC 1 cut(s) 403
BglII AGATCT 1 cut(s) 2396
BisI GCNGC 3 cut(s) 296, 935, 2005
BlsI GCNGC 3 cut(s) 297, 936, 2006
BmcAI AGTACT 2 cut(s) 1277, 1581
Bme1390I CCNGG 5 cut(s) 253, 311, 1223, 2150, 2193
BmgT120I GGNCC 1 cut(s) 1219
BmiI GGNNCC 1 cut(s) 165
BmrFI CCNGG 5 cut(s) 253, 311, 1223, 2150, 2193
BmrI ACTGGG 1 cut(s) 1938
BmsI GCATC 4 cut(s) 100, 613, 1851, 1887
BmuI ACTGGG 1 cut(s) 1938
BpiI GAAGAC 3 cut(s) 958, 971, 1436
BplI GAGNNNNNCTC 2 cut(s) 1417, 1449
BpmI CTGGAG 4 cut(s) 235, 364, 1398, 1877
Bpu10I CCTNAGC 1 cut(s) 2027
Bpu14I TTCGAA 1 cut(s) 2510
BpuEI CTTGAG 5 cut(s) 205, 1124, 1279, 1502, 2144
BsaI GGTCTC 2 cut(s) 1013, 1232
BsaJI CCNNGG 7 cut(s) 252, 310, 1000, 1032, 1221, 1222, 2149
BsaWI WCCGGW 1 cut(s) 2520
BsaXI ACNNNNNCTCC 2 cut(s) 2246, 2276
Bsc4I CCNNNNNNNGG 8 cut(s) 316, 467, 553, 1038, 1874, 2149, 2276, 2527
Bse1I ACTGG 5 cut(s) 83, 381, 928, 1933, 2058
Bse21I CCTNAGG 1 cut(s) 584
Bse3DI GCAATG 2 cut(s) 808, 979
BseAI TCCGGA 1 cut(s) 2520
BseBI CCWGG 5 cut(s) 253, 311, 1223, 2150, 2193
BseDI CCNNGG 7 cut(s) 252, 310, 1000, 1032, 1221, 1222, 2149
BseGI GGATG 2 cut(s) 40, 814
BseLI CCNNNNNNNGG 8 cut(s) 316, 467, 553, 1038, 1874, 2149, 2276, 2527
BseMI GCAATG 2 cut(s) 808, 979
BseMII CTCAG 6 cut(s) 97, 249, 858, 2001, 2018, 2308
BseNI ACTGG 5 cut(s) 83, 381, 928, 1933, 2058
BseRI GAGGAG 3 cut(s) 204, 930, 1097
BseXI GCAGC 3 cut(s) 307, 946, 2016
BseYI CCCAGC 2 cut(s) 64, 501
BsgI GTGCAG 1 cut(s) 1311
BshFI GGCC 3 cut(s) 989, 1220, 2018
BsiHKAI GWGCWC 1 cut(s) 772
BsiSI CCGG 1 cut(s) 2521
BslFI GGGAC 3 cut(s) 1564, 2045, 2292
BslI CCNNNNNNNGG 8 cut(s) 316, 467, 553, 1038, 1874, 2149, 2276, 2527
BsmAI GTCTC 3 cut(s) 1013, 1079, 1232
BsmFI GGGAC 3 cut(s) 1564, 2045, 2292
BsnI GGCC 3 cut(s) 989, 1220, 2018
Bso31I GGTCTC 2 cut(s) 1013, 1232
Bsp119I TTCGAA 1 cut(s) 2510
Bsp1286I GDGCHC 2 cut(s) 168, 772
Bsp13I TCCGGA 1 cut(s) 2520
Bsp143I GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
BspACI CCGC 2 cut(s) 1943, 2007
BspANI GGCC 3 cut(s) 989, 1220, 2018
BspCNI CTCAG 6 cut(s) 96, 248, 859, 2000, 2019, 2307
BspEI TCCGGA 1 cut(s) 2520
BspLI GGNNCC 1 cut(s) 165
BspPI GGATC 1 cut(s) 596
BspT104I TTCGAA 1 cut(s) 2510
BspTI CTTAAG 2 cut(s) 745, 2045
BspTNI GGTCTC 2 cut(s) 1013, 1232
BsrDI GCAATG 2 cut(s) 808, 979
BsrI ACTGG 5 cut(s) 83, 381, 928, 1933, 2058
BssECI CCNNGG 7 cut(s) 252, 310, 1000, 1032, 1221, 1222, 2149
BssMI GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
BssSI CACGAG 1 cut(s) 2376
BssT1I CCWWGG 1 cut(s) 1000
Bst2BI CACGAG 1 cut(s) 2376
Bst2UI CCWGG 5 cut(s) 253, 311, 1223, 2150, 2193
Bst4CI ACNGT 7 cut(s) 28, 1058, 1160, 1314, 2104, 2258, 2406
Bst6I CTCTTC 3 cut(s) 388, 1266, 1521
BstAFI CTTAAG 2 cut(s) 745, 2045
BstBI TTCGAA 1 cut(s) 2510
BstC8I GCNNGC 3 cut(s) 628, 1540, 1755
BstF5I GGATG 2 cut(s) 40, 814
BstHHI GCGC 2 cut(s) 1512, 1770
BstKTI GATC 7 cut(s) 91, 121, 135, 591, 1288, 1818, 2399
BstMAI GTCTC 3 cut(s) 1013, 1079, 1232
BstMBI GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
BstMWI GCNNNNNNNGC 1 cut(s) 2128
BstNI CCWGG 5 cut(s) 253, 311, 1223, 2150, 2193
BstNSI RCATGY 6 cut(s) 561, 902, 1066, 1542, 1699, 2026
BstSCI CCNGG 5 cut(s) 251, 309, 1221, 2148, 2191
BstSFI CTRYAG 2 cut(s) 2103, 2402
BstV1I GCAGC 3 cut(s) 307, 946, 2016
BstV2I GAAGAC 3 cut(s) 958, 971, 1436
BstX2I RGATCY 2 cut(s) 588, 2396
BstXI CCANNNNNNTGG 1 cut(s) 1107
BstYI RGATCY 2 cut(s) 588, 2396
Bsu36I CCTNAGG 1 cut(s) 584
BsuI GTATCC 1 cut(s) 403
BsuRI GGCC 3 cut(s) 989, 1220, 2018
BtsCI GGATG 2 cut(s) 40, 814
BtsIMutI CAGTG 5 cut(s) 24, 91, 388, 1063, 1926
Cac8I GCNNGC 3 cut(s) 628, 1540, 1755
CfoI GCGC 2 cut(s) 1512, 1770
Cfr13I GGNCC 1 cut(s) 1219
Csp6I GTAC 6 cut(s) 194, 828, 1276, 1526, 1580, 1737
CspCI CAANNNNNGTGG 2 cut(s) 2410, 2445
CviQI GTAC 6 cut(s) 194, 828, 1276, 1526, 1580, 1737
DpnI GATC 7 cut(s) 90, 120, 134, 590, 1287, 1817, 2398
DpnII GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
DraI TTTAAA 1 cut(s) 760
DraIII CACNNNGTG 1 cut(s) 340
EaeI YGGCCR 1 cut(s) 987
Eam1104I CTCTTC 3 cut(s) 388, 1266, 1521
EarI CTCTTC 3 cut(s) 388, 1266, 1521
EciI GGCGGA 1 cut(s) 1958
Eco130I CCWWGG 1 cut(s) 1000
Eco147I AGGCCT 1 cut(s) 2018
Eco24I GRGCYC 1 cut(s) 168
Eco31I GGTCTC 2 cut(s) 1013, 1232
Eco57I CTGAAG 2 cut(s) 603, 638
Eco81I CCTNAGG 1 cut(s) 584
EcoRI GAATTC 2 cut(s) 1779, 2345
EcoRII CCWGG 5 cut(s) 251, 309, 1221, 2148, 2191
EcoT14I CCWWGG 1 cut(s) 1000
EcoT22I ATGCAT 2 cut(s) 1344, 1540
EcoT38I GRGCYC 1 cut(s) 168
ErhI CCWWGG 1 cut(s) 1000
FalI AAGNNNNNCTT 2 cut(s) 398, 430
FaqI GGGAC 3 cut(s) 1564, 2045, 2292
FbaI TGATCA 1 cut(s) 1815
FblI GTMKAC 1 cut(s) 372
Fnu4HI GCNGC 3 cut(s) 296, 935, 2005
FokI GGATG 2 cut(s) 47, 821
FriOI GRGCYC 1 cut(s) 168
Fsp4HI GCNGC 3 cut(s) 296, 935, 2005
FspBI CTAG 2 cut(s) 278, 1916
FspI TGCGCA 2 cut(s) 1511, 1769
GlaI GCGC 2 cut(s) 1511, 1769
GluI GCNGC 3 cut(s) 296, 935, 2005
GsaI CCCAGC 2 cut(s) 68, 505
GsuI CTGGAG 4 cut(s) 235, 364, 1398, 1877
HaeIII GGCC 3 cut(s) 989, 1220, 2018
HapII CCGG 1 cut(s) 2521
HhaI GCGC 2 cut(s) 1512, 1770
Hin6I GCGC 2 cut(s) 1510, 1768
HinP1I GCGC 2 cut(s) 1510, 1768
HindIII AAGCTT 3 cut(s) 672, 1142, 1955
HpaII CCGG 1 cut(s) 2521
HphI GGTGA 6 cut(s) 828, 1404, 1475, 2132, 2369, 2471
Hpy166II GTNNAC 2 cut(s) 373, 2254
Hpy188III TCNNGA 8 cut(s) 32, 704, 715, 1377, 1832, 1894, 2202, 2521
Hpy8I GTNNAC 2 cut(s) 373, 2254
HpyCH4III ACNGT 7 cut(s) 28, 1058, 1160, 1314, 2104, 2258, 2406
HpyCH4IV ACGT 1 cut(s) 2039
HpyF10VI GCNNNNNNNGC 1 cut(s) 2128
HpySE526I ACGT 1 cut(s) 2039
HspAI GCGC 2 cut(s) 1510, 1768
Kpn2I TCCGGA 1 cut(s) 2520
Ksp22I TGATCA 1 cut(s) 1815
Kzo9I GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
LmnI GCTCC 4 cut(s) 163, 199, 767, 2136
Lsp1109I GCAGC 3 cut(s) 307, 946, 2016
LweI GCATC 4 cut(s) 100, 613, 1851, 1887
MaeI CTAG 2 cut(s) 278, 1916
MaeII ACGT 1 cut(s) 2039
MalI GATC 7 cut(s) 90, 120, 134, 590, 1287, 1817, 2398
MboI GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
MfeI CAATTG 1 cut(s) 324
MflI RGATCY 2 cut(s) 588, 2396
MhlI GDGCHC 2 cut(s) 168, 772
MlsI TGGCCA 1 cut(s) 989
MluNI TGGCCA 1 cut(s) 989
MlyI GAGTC 4 cut(s) 227, 371, 617, 1426
MmeI TCCRAC 3 cut(s) 1333, 2158, 2434
Mox20I TGGCCA 1 cut(s) 989
Mph1103I ATGCAT 2 cut(s) 1344, 1540
MroI TCCGGA 1 cut(s) 2520
MroXI GAANNNNTTC 3 cut(s) 2077, 2187, 2516
MscI TGGCCA 1 cut(s) 989
MslI CAYNNNNRTG 2 cut(s) 143, 556
Msp20I TGGCCA 1 cut(s) 989
MspA1I CMGCKG 2 cut(s) 68, 2007
MspCI CTTAAG 2 cut(s) 745, 2045
MspI CCGG 1 cut(s) 2521
MspR9I CCNGG 5 cut(s) 253, 311, 1223, 2150, 2193
MunI CAATTG 1 cut(s) 324
MvaI CCWGG 5 cut(s) 253, 311, 1223, 2150, 2193
MwoI GCNNNNNNNGC 1 cut(s) 2128
NdeII GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
NlaIV GGNNCC 1 cut(s) 165
NmuCI GTSAC 6 cut(s) 342, 609, 790, 1058, 2357, 2459
NsbI TGCGCA 2 cut(s) 1511, 1769
NsiI ATGCAT 2 cut(s) 1344, 1540
NspI RCATGY 6 cut(s) 561, 902, 1066, 1542, 1699, 2026
NspV TTCGAA 1 cut(s) 2510
OliI CACNNNNGTG 1 cut(s) 143
PaeI GCATGC 1 cut(s) 1542
PasI CCCWGGG 1 cut(s) 1222
PceI AGGCCT 1 cut(s) 2018
PciI ACATGT 2 cut(s) 1062, 1695
PdmI GAANNNNTTC 3 cut(s) 2077, 2187, 2516
PfeI GAWTC 7 cut(s) 98, 480, 646, 1409, 1658, 2078, 2531
PkrI GCNGC 3 cut(s) 297, 936, 2006
PleI GAGTC 4 cut(s) 227, 371, 616, 1426
PpsI GAGTC 4 cut(s) 227, 371, 616, 1426
PscI ACATGT 2 cut(s) 1062, 1695
PshBI ATTAAT 1 cut(s) 242
PsiI TTATAA 1 cut(s) 729
Psp6I CCWGG 5 cut(s) 251, 309, 1221, 2148, 2191
PspFI CCCAGC 2 cut(s) 64, 501
PspGI CCWGG 5 cut(s) 251, 309, 1221, 2148, 2191
PspN4I GGNNCC 1 cut(s) 165
PspPI GGNCC 1 cut(s) 1219
PsuI RGATCY 2 cut(s) 588, 2396
PvuII CAGCTG 1 cut(s) 68
RsaI GTAC 6 cut(s) 195, 829, 1277, 1527, 1581, 1738
RsaNI GTAC 6 cut(s) 194, 828, 1276, 1526, 1580, 1737
RseI CAYNNNNRTG 2 cut(s) 143, 556
SatI GCNGC 3 cut(s) 296, 935, 2005
Sau3AI GATC 7 cut(s) 88, 118, 132, 588, 1285, 1815, 2396
Sau96I GGNCC 1 cut(s) 1219
ScaI AGTACT 2 cut(s) 1277, 1581
SchI GAGTC 4 cut(s) 227, 371, 617, 1426
ScrFI CCNGG 5 cut(s) 253, 311, 1223, 2150, 2193
SduI GDGCHC 2 cut(s) 168, 772
SfaNI GCATC 4 cut(s) 100, 613, 1851, 1887
SfcI CTRYAG 2 cut(s) 2103, 2402
SfuI TTCGAA 1 cut(s) 2510
SmiMI CAYNNNNRTG 2 cut(s) 143, 556
SmlI CTYRAG 7 cut(s) 184, 745, 1139, 1294, 1481, 2045, 2123
SmoI CTYRAG 7 cut(s) 184, 745, 1139, 1294, 1481, 2045, 2123
SphI GCATGC 1 cut(s) 1542
SseBI AGGCCT 1 cut(s) 2018
SsiI CCGC 2 cut(s) 1943, 2007
SspI AATATT 2 cut(s) 1505, 1761
SspMI CTAG 2 cut(s) 278, 1916
StuI AGGCCT 1 cut(s) 2018
StyD4I CCNGG 5 cut(s) 251, 309, 1221, 2148, 2191
StyI CCWWGG 1 cut(s) 1000
TaaI ACNGT 7 cut(s) 28, 1058, 1160, 1314, 2104, 2258, 2406
TaiI ACGT 1 cut(s) 2042
TaqI TCGA 5 cut(s) 705, 1183, 1661, 1777, 2510
TatI WGTACW 3 cut(s) 1275, 1579, 1736
TfiI GAWTC 7 cut(s) 98, 480, 646, 1409, 1658, 2078, 2531
TscAI CASTG 5 cut(s) 31, 91, 388, 1063, 1933
TseFI GTSAC 6 cut(s) 342, 609, 790, 1058, 2357, 2459
TseI GCWGC 3 cut(s) 295, 934, 2004
Tsp45I GTSAC 6 cut(s) 342, 609, 790, 1058, 2357, 2459
TspDTI ATGAA 7 cut(s) 17, 260, 274, 305, 1324, 1688, 2484
TspRI CASTG 5 cut(s) 31, 91, 388, 1063, 1933
Vha464I CTTAAG 2 cut(s) 745, 2045
VspI ATTAAT 1 cut(s) 242
XapI RAATTY 9 cut(s) 572, 761, 1366, 1382, 1568, 1624, 1779, 2345, 2506
XceI RCATGY 6 cut(s) 561, 902, 1066, 1542, 1699, 2026
XmiI GTMKAC 1 cut(s) 372
XmnI GAANNNNTTC 3 cut(s) 2077, 2187, 2516
XspI CTAG 2 cut(s) 278, 1916
ZrmI AGTACT 2 cut(s) 1277, 1581
Zsp2I ATGCAT 2 cut(s) 1344, 1540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.