Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 102 | 1.9e-17 | Rx N-terminal domain |
| NB-ARC | PF00931 | 161 - 340 | 6.3e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 425 - 495 | 4.1e-25 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 565 - 855 | 2.7e-28 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 679 - 803 | 4e-36 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1013 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 614, 766 |
| AatII | GACGTC | 1 cut(s) | 375 |
| Acc16I | TGCGCA | 1 cut(s) | 2792 |
| Acc36I | ACCTGC | 1 cut(s) | 1013 |
| Acc65I | GGTACC | 3 cut(s) | 331, 941, 1728 |
| AccB1I | GGYRCC | 3 cut(s) | 331, 941, 1728 |
| AccI | GTMKAC | 4 cut(s) | 600, 1657, 2842, 2877 |
| AccII | CGCG | 1 cut(s) | 2067 |
| AccIII | TCCGGA | 1 cut(s) | 1496 |
| AciI | CCGC | 5 cut(s) | 111, 283, 515, 2067, 2590 |
| AclI | AACGTT | 1 cut(s) | 3118 |
| AclWI | GGATC | 1 cut(s) | 2953 |
| AcsI | RAATTY | 3 cut(s) | 779, 2614, 2864 |
| AcuI | CTGAAG | 9 cut(s) | 294, 620, 678, 693, 1268, 1350, 1682, 1712, 2039 |
| AcvI | CACGTG | 1 cut(s) | 890 |
| AcyI | GRCGYC | 1 cut(s) | 372 |
| AfaI | GTAC | 6 cut(s) | 333, 943, 1425, 1536, 1730, 1831 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 557, 1967, 2536, 2636, 2637, 2762, 2921, 3059 |
| AflIII | ACRYGT | 2 cut(s) | 887, 1420 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 637 |
| AjnI | CCWGG | 2 cut(s) | 1747, 2281 |
| Alw21I | GWGCWC | 1 cut(s) | 1716 |
| Alw26I | GTCTC | 2 cut(s) | 1498, 3125 |
| AlwI | GGATC | 1 cut(s) | 2953 |
| Ama87I | CYCGRG | 2 cut(s) | 2083, 2480 |
| Aor13HI | TCCGGA | 1 cut(s) | 1496 |
| AoxI | GGCC | 2 cut(s) | 492, 3146 |
| ApeKI | GCWGC | 8 cut(s) | 118, 315, 318, 905, 1097, 2374, 2926, 2929 |
| ApoI | RAATTY | 3 cut(s) | 779, 2614, 2864 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2657, 2689 |
| AseI | ATTAAT | 2 cut(s) | 1802, 1907 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 546, 2751 |
| Asp718I | GGTACC | 3 cut(s) | 331, 941, 1728 |
| AspLEI | GCGC | 2 cut(s) | 2067, 2793 |
| AspS9I | GGNCC | 1 cut(s) | 3147 |
| AsuC2I | CCSGG | 4 cut(s) | 910, 2481, 2482, 2491 |
| AsuHPI | GGTGA | 6 cut(s) | 1454, 2039, 2189, 2434, 2845, 2992 |
| AsuII | TTCGAA | 1 cut(s) | 2969 |
| AsuNHI | GCTAGC | 1 cut(s) | 2503 |
| AvaI | CYCGRG | 2 cut(s) | 2083, 2480 |
| BaeGI | GKGCMC | 1 cut(s) | 2273 |
| BanI | GGYRCC | 3 cut(s) | 331, 941, 1728 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1323, 1355 |
| BbrPI | CACGTG | 1 cut(s) | 890 |
| BbsI | GAAGAC | 2 cut(s) | 110, 1361 |
| Bbv12I | GWGCWC | 1 cut(s) | 1716 |
| BbvI | GCAGC | 8 cut(s) | 105, 327, 330, 917, 1084, 2386, 2913, 2916 |
| BceAI | ACGGC | 4 cut(s) | 777, 1571, 2755, 2995 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1023, 1057 |
| BciT130I | CCWGG | 2 cut(s) | 1749, 2283 |
| BcnI | CCSGG | 4 cut(s) | 910, 2481, 2482, 2491 |
| BcoDI | GTCTC | 2 cut(s) | 1498, 3125 |
| BfaI | CTAG | 9 cut(s) | 342, 462, 734, 1397, 1640, 1877, 2012, 2304, 2504 |
| BfmI | CTRYAG | 1 cut(s) | 1032 |
| BfuAI | ACCTGC | 1 cut(s) | 1013 |
| BglII | AGATCT | 4 cut(s) | 1036, 1333, 1981, 2296 |
| BisI | GCNGC | 8 cut(s) | 119, 316, 319, 906, 1098, 2375, 2927, 2930 |
| BlpI | GCTNAGC | 2 cut(s) | 114, 2370 |
| BlsI | GCNGC | 8 cut(s) | 120, 317, 320, 907, 1099, 2376, 2928, 2931 |
| BmcAI | AGTACT | 1 cut(s) | 1536 |
| Bme1390I | CCNGG | 6 cut(s) | 910, 1749, 2283, 2481, 2482, 2491 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 637 |
| BmeT110I | CYCGRG | 2 cut(s) | 2083, 2480 |
| BmgT120I | GGNCC | 1 cut(s) | 3147 |
| BmiI | GGNNCC | 3 cut(s) | 333, 943, 1730 |
| BmrFI | CCNGG | 6 cut(s) | 910, 1749, 2283, 2481, 2482, 2491 |
| BmsI | GCATC | 6 cut(s) | 160, 1589, 1780, 1944, 2104, 2802 |
| BmtI | GCTAGC | 1 cut(s) | 2507 |
| BpiI | GAAGAC | 2 cut(s) | 110, 1361 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 2 cut(s) | 219, 2234 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 114, 2370 |
| Bpu14I | TTCGAA | 1 cut(s) | 2969 |
| BpuEI | CTTGAG | 5 cut(s) | 856, 1266, 1559, 2417, 2890 |
| BpuMI | CCSGG | 4 cut(s) | 910, 2481, 2482, 2491 |
| BsaAI | YACGTR | 1 cut(s) | 890 |
| BsaHI | GRCGYC | 1 cut(s) | 372 |
| BsaJI | CCNNGG | 4 cut(s) | 1961, 2480, 2481, 2490 |
| BsaWI | WCCGGW | 2 cut(s) | 76, 1496 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1478, 1508, 2370, 2400 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 557, 1967, 2536, 2636, 2637, 2762, 2921, 3059 |
| Bse1I | ACTGG | 4 cut(s) | 532, 938, 2029, 3013 |
| BseAI | TCCGGA | 1 cut(s) | 1496 |
| BseBI | CCWGG | 2 cut(s) | 1749, 2283 |
| BseDI | CCNNGG | 4 cut(s) | 1961, 2480, 2481, 2490 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 557, 1967, 2536, 2636, 2637, 2762, 2921, 3059 |
| BseMII | CTCAG | 8 cut(s) | 105, 202, 966, 1337, 1545, 2361, 2660, 3072 |
| BseNI | ACTGG | 4 cut(s) | 532, 938, 2029, 3013 |
| BseRI | GAGGAG | 3 cut(s) | 191, 2567, 2804 |
| BseSI | GKGCMC | 1 cut(s) | 2273 |
| BseXI | GCAGC | 8 cut(s) | 105, 327, 330, 917, 1084, 2386, 2913, 2916 |
| Bsh1236I | CGCG | 1 cut(s) | 2067 |
| BshFI | GGCC | 2 cut(s) | 494, 3148 |
| BshNI | GGYRCC | 3 cut(s) | 331, 941, 1728 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1716 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2083, 2480 |
| BsiSI | CCGG | 6 cut(s) | 77, 909, 1497, 2481, 2490, 2797 |
| BslFI | GGGAC | 3 cut(s) | 1616, 2368, 2463 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 557, 1967, 2536, 2636, 2637, 2762, 2921, 3059 |
| BsmAI | GTCTC | 2 cut(s) | 1498, 3125 |
| BsmFI | GGGAC | 3 cut(s) | 1616, 2368, 2463 |
| BsmI | GAATGC | 2 cut(s) | 1582, 2495 |
| BsnI | GGCC | 2 cut(s) | 494, 3148 |
| BsoBI | CYCGRG | 2 cut(s) | 2083, 2480 |
| Bsp119I | TTCGAA | 1 cut(s) | 2969 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1716, 2273 |
| Bsp13I | TCCGGA | 1 cut(s) | 1496 |
| Bsp143I | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 114, 2370 |
| BspACI | CCGC | 5 cut(s) | 111, 283, 515, 2067, 2590 |
| BspANI | GGCC | 2 cut(s) | 494, 3148 |
| BspCNI | CTCAG | 8 cut(s) | 106, 201, 967, 1338, 1544, 2362, 2661, 3073 |
| BspEI | TCCGGA | 1 cut(s) | 1496 |
| BspFNI | CGCG | 1 cut(s) | 2067 |
| BspLI | GGNNCC | 3 cut(s) | 333, 943, 1730 |
| BspMAI | CTGCAG | 1 cut(s) | 1036 |
| BspMI | ACCTGC | 1 cut(s) | 1013 |
| BspOI | GCTAGC | 1 cut(s) | 2507 |
| BspPI | GGATC | 1 cut(s) | 2953 |
| BspT104I | TTCGAA | 1 cut(s) | 2969 |
| BspT107I | GGYRCC | 3 cut(s) | 331, 941, 1728 |
| BsrI | ACTGG | 4 cut(s) | 532, 938, 2029, 3013 |
| BssECI | CCNNGG | 4 cut(s) | 1961, 2480, 2481, 2490 |
| BssMI | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| BssNAI | GTATAC | 1 cut(s) | 601 |
| BssNI | GRCGYC | 1 cut(s) | 372 |
| BssT1I | CCWWGG | 1 cut(s) | 1961 |
| Bst1107I | GTATAC | 1 cut(s) | 601 |
| Bst2UI | CCWGG | 2 cut(s) | 1749, 2283 |
| Bst4CI | ACNGT | 8 cut(s) | 687, 811, 1268, 1607, 2382, 2428, 2828, 2963 |
| Bst6I | CTCTTC | 1 cut(s) | 40 |
| BstACI | GRCGYC | 1 cut(s) | 372 |
| BstBAI | YACGTR | 1 cut(s) | 890 |
| BstBI | TTCGAA | 1 cut(s) | 2969 |
| BstC8I | GCNNGC | 4 cut(s) | 1209, 2505, 2509, 3050 |
| BstEII | GGTNACC | 1 cut(s) | 2485 |
| BstFNI | CGCG | 1 cut(s) | 2067 |
| BstHHI | GCGC | 2 cut(s) | 2067, 2793 |
| BstKTI | GATC | 8 cut(s) | 876, 1039, 1336, 1352, 1396, 1984, 2299, 2948 |
| BstMAI | GTCTC | 2 cut(s) | 1498, 3125 |
| BstMBI | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1557, 1777, 2797 |
| BstNI | CCWGG | 2 cut(s) | 1749, 2283 |
| BstNSI | RCATGY | 6 cut(s) | 1010, 1424, 1765, 2108, 2141, 2692 |
| BstPI | GGTNACC | 1 cut(s) | 2485 |
| BstSCI | CCNGG | 6 cut(s) | 908, 1747, 2281, 2479, 2480, 2489 |
| BstSFI | CTRYAG | 1 cut(s) | 1032 |
| BstSLI | GKGCMC | 1 cut(s) | 2273 |
| BstUI | CGCG | 1 cut(s) | 2067 |
| BstV1I | GCAGC | 8 cut(s) | 105, 327, 330, 917, 1084, 2386, 2913, 2916 |
| BstV2I | GAAGAC | 2 cut(s) | 110, 1361 |
| BstX2I | RGATCY | 4 cut(s) | 1036, 1333, 1981, 2296 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1215 |
| BstYI | RGATCY | 4 cut(s) | 1036, 1333, 1981, 2296 |
| BstZ17I | GTATAC | 1 cut(s) | 601 |
| BsuRI | GGCC | 2 cut(s) | 494, 3148 |
| BtsI | GCAGTG | 1 cut(s) | 2840 |
| BtsIMutI | CAGTG | 5 cut(s) | 701, 1343, 1706, 2022, 2840 |
| BveI | ACCTGC | 1 cut(s) | 1013 |
| Cac8I | GCNNGC | 4 cut(s) | 1209, 2505, 2509, 3050 |
| CfoI | GCGC | 2 cut(s) | 2067, 2793 |
| Cfr13I | GGNCC | 1 cut(s) | 3147 |
| Cfr9I | CCCGGG | 1 cut(s) | 2480 |
| CseI | GACGC | 1 cut(s) | 1907 |
| CsiI | ACCWGGT | 1 cut(s) | 1747 |
| Csp6I | GTAC | 6 cut(s) | 332, 942, 1424, 1535, 1729, 1830 |
| CviQI | GTAC | 6 cut(s) | 332, 942, 1424, 1535, 1729, 1830 |
| DpnI | GATC | 8 cut(s) | 875, 1038, 1335, 1351, 1395, 1983, 2298, 2947 |
| DpnII | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 614, 766 |
| DriI | GACNNNNNGTC | 1 cut(s) | 637 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 614, 766 |
| Eam1104I | CTCTTC | 1 cut(s) | 40 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 637 |
| EarI | CTCTTC | 1 cut(s) | 40 |
| EciI | GGCGGA | 1 cut(s) | 2579 |
| Eco130I | CCWWGG | 1 cut(s) | 1961 |
| Eco57I | CTGAAG | 9 cut(s) | 294, 620, 678, 693, 1268, 1350, 1682, 1712, 2039 |
| Eco72I | CACGTG | 1 cut(s) | 890 |
| Eco88I | CYCGRG | 2 cut(s) | 2083, 2480 |
| Eco91I | GGTNACC | 1 cut(s) | 2485 |
| EcoO65I | GGTNACC | 1 cut(s) | 2485 |
| EcoRII | CCWGG | 2 cut(s) | 1747, 2281 |
| EcoT14I | CCWWGG | 1 cut(s) | 1961 |
| EcoT22I | ATGCAT | 2 cut(s) | 1464, 1582 |
| ErhI | CCWWGG | 1 cut(s) | 1961 |
| FaqI | GGGAC | 3 cut(s) | 1616, 2368, 2463 |
| FauNDI | CATATG | 1 cut(s) | 1172 |
| FblI | GTMKAC | 4 cut(s) | 600, 1657, 2842, 2877 |
| Fnu4HI | GCNGC | 8 cut(s) | 119, 316, 319, 906, 1098, 2375, 2927, 2930 |
| Fsp4HI | GCNGC | 8 cut(s) | 119, 316, 319, 906, 1098, 2375, 2927, 2930 |
| FspBI | CTAG | 9 cut(s) | 342, 462, 734, 1397, 1640, 1877, 2012, 2304, 2504 |
| FspI | TGCGCA | 1 cut(s) | 2792 |
| GlaI | GCGC | 2 cut(s) | 2066, 2792 |
| GluI | GCNGC | 8 cut(s) | 119, 316, 319, 906, 1098, 2375, 2927, 2930 |
| GsuI | CTGGAG | 2 cut(s) | 219, 2234 |
| HaeIII | GGCC | 2 cut(s) | 494, 3148 |
| HapII | CCGG | 6 cut(s) | 77, 909, 1497, 2481, 2490, 2797 |
| HgaI | GACGC | 1 cut(s) | 1907 |
| HhaI | GCGC | 2 cut(s) | 2067, 2793 |
| Hin1I | GRCGYC | 1 cut(s) | 372 |
| Hin6I | GCGC | 2 cut(s) | 2065, 2791 |
| HinP1I | GCGC | 2 cut(s) | 2065, 2791 |
| HincII | GTYRAC | 3 cut(s) | 376, 956, 2878 |
| HindII | GTYRAC | 3 cut(s) | 376, 956, 2878 |
| HindIII | AAGCTT | 3 cut(s) | 1694, 2459, 2519 |
| HpaII | CCGG | 6 cut(s) | 77, 909, 1497, 2481, 2490, 2797 |
| HphI | GGTGA | 6 cut(s) | 1454, 2039, 2189, 2434, 2845, 2992 |
| Hpy166II | GTNNAC | 9 cut(s) | 376, 601, 956, 1658, 1830, 2843, 2878, 2894, 2991 |
| Hpy8I | GTNNAC | 9 cut(s) | 376, 601, 956, 1658, 1830, 2843, 2878, 2894, 2991 |
| Hpy99I | CGWCG | 3 cut(s) | 611, 800, 2189 |
| HpyCH4III | ACNGT | 8 cut(s) | 687, 811, 1268, 1607, 2382, 2428, 2828, 2963 |
| HpyCH4IV | ACGT | 5 cut(s) | 372, 889, 1123, 1850, 3118 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1557, 1777, 2797 |
| HpySE526I | ACGT | 5 cut(s) | 372, 889, 1123, 1850, 3118 |
| Hsp92I | GRCGYC | 1 cut(s) | 372 |
| HspAI | GCGC | 2 cut(s) | 2065, 2791 |
| Kpn2I | TCCGGA | 1 cut(s) | 1496 |
| KpnI | GGTACC | 3 cut(s) | 335, 945, 1732 |
| Kzo9I | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| LmnI | GCTCC | 2 cut(s) | 23, 126 |
| Lsp1109I | GCAGC | 8 cut(s) | 105, 327, 330, 917, 1084, 2386, 2913, 2916 |
| LweI | GCATC | 6 cut(s) | 160, 1589, 1780, 1944, 2104, 2802 |
| MabI | ACCWGGT | 1 cut(s) | 1747 |
| MaeI | CTAG | 9 cut(s) | 342, 462, 734, 1397, 1640, 1877, 2012, 2304, 2504 |
| MaeII | ACGT | 5 cut(s) | 372, 889, 1123, 1850, 3118 |
| MaeIII | GTNAC | 9 cut(s) | 699, 880, 1027, 1196, 1812, 2107, 2177, 2422, 2485 |
| MalI | GATC | 8 cut(s) | 875, 1038, 1335, 1351, 1395, 1983, 2298, 2947 |
| MboI | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| MfeI | CAATTG | 3 cut(s) | 552, 1362, 3028 |
| MflI | RGATCY | 4 cut(s) | 1036, 1333, 1981, 2296 |
| MhlI | GDGCHC | 2 cut(s) | 1716, 2273 |
| MlyI | GAGTC | 8 cut(s) | 210, 467, 624, 1080, 1523, 1564, 2180, 2883 |
| MmeI | TCCRAC | 5 cut(s) | 1354, 1497, 2248, 2271, 2760 |
| Mph1103I | ATGCAT | 2 cut(s) | 1464, 1582 |
| MroI | TCCGGA | 1 cut(s) | 1496 |
| MroXI | GAANNNNTTC | 2 cut(s) | 546, 2751 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1737, 2142 |
| MspA1I | CMGCKG | 2 cut(s) | 113, 2369 |
| MspI | CCGG | 6 cut(s) | 77, 909, 1497, 2481, 2490, 2797 |
| MspR9I | CCNGG | 6 cut(s) | 910, 1749, 2283, 2481, 2482, 2491 |
| MunI | CAATTG | 3 cut(s) | 552, 1362, 3028 |
| Mva1269I | GAATGC | 2 cut(s) | 1582, 2495 |
| MvaI | CCWGG | 2 cut(s) | 1749, 2283 |
| MvnI | CGCG | 1 cut(s) | 2067 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1557, 1777, 2797 |
| NciI | CCSGG | 4 cut(s) | 910, 2481, 2482, 2491 |
| NdeI | CATATG | 1 cut(s) | 1172 |
| NdeII | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| NheI | GCTAGC | 1 cut(s) | 2503 |
| NlaIV | GGNNCC | 3 cut(s) | 333, 943, 1730 |
| NmuCI | GTSAC | 6 cut(s) | 699, 880, 1196, 2107, 2177, 2422 |
| NsbI | TGCGCA | 1 cut(s) | 2792 |
| NsiI | ATGCAT | 2 cut(s) | 1464, 1582 |
| NspI | RCATGY | 6 cut(s) | 1010, 1424, 1765, 2108, 2141, 2692 |
| NspV | TTCGAA | 1 cut(s) | 2969 |
| PacI | TTAATTAA | 1 cut(s) | 1806 |
| PaqCI | CACCTGC | 1 cut(s) | 1013 |
| PciI | ACATGT | 1 cut(s) | 1420 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 603 |
| PctI | GAATGC | 2 cut(s) | 1582, 2495 |
| PdmI | GAANNNNTTC | 2 cut(s) | 546, 2751 |
| PfeI | GAWTC | 8 cut(s) | 305, 354, 1871, 2254, 2401, 2555, 2747, 2906 |
| PflFI | GACNNNGTC | 1 cut(s) | 614 |
| PkrI | GCNGC | 8 cut(s) | 120, 317, 320, 907, 1099, 2376, 2928, 2931 |
| PleI | GAGTC | 8 cut(s) | 209, 466, 623, 1080, 1523, 1563, 2179, 2882 |
| PmaCI | CACGTG | 1 cut(s) | 890 |
| PmlI | CACGTG | 1 cut(s) | 890 |
| PpsI | GAGTC | 8 cut(s) | 209, 466, 623, 1080, 1523, 1563, 2179, 2882 |
| Ppu21I | YACGTR | 1 cut(s) | 890 |
| PscI | ACATGT | 1 cut(s) | 1420 |
| PshBI | ATTAAT | 2 cut(s) | 1802, 1907 |
| Psp1406I | AACGTT | 1 cut(s) | 3118 |
| Psp6I | CCWGG | 2 cut(s) | 1747, 2281 |
| PspCI | CACGTG | 1 cut(s) | 890 |
| PspEI | GGTNACC | 1 cut(s) | 2485 |
| PspGI | CCWGG | 2 cut(s) | 1747, 2281 |
| PspN4I | GGNNCC | 3 cut(s) | 333, 943, 1730 |
| PspPI | GGNCC | 1 cut(s) | 3147 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 329, 361 |
| PstI | CTGCAG | 1 cut(s) | 1036 |
| PsuI | RGATCY | 4 cut(s) | 1036, 1333, 1981, 2296 |
| PsyI | GACNNNGTC | 1 cut(s) | 614 |
| PvuII | CAGCTG | 1 cut(s) | 2369 |
| RsaI | GTAC | 6 cut(s) | 333, 943, 1425, 1536, 1730, 1831 |
| RsaNI | GTAC | 6 cut(s) | 332, 942, 1424, 1535, 1729, 1830 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1737, 2142 |
| SalI | GTCGAC | 1 cut(s) | 2876 |
| SatI | GCNGC | 8 cut(s) | 119, 316, 319, 906, 1098, 2375, 2927, 2930 |
| Sau3AI | GATC | 8 cut(s) | 873, 1036, 1333, 1349, 1393, 1981, 2296, 2945 |
| Sau96I | GGNCC | 1 cut(s) | 3147 |
| ScaI | AGTACT | 1 cut(s) | 1536 |
| SchI | GAGTC | 8 cut(s) | 210, 467, 624, 1080, 1523, 1564, 2180, 2883 |
| ScrFI | CCNGG | 6 cut(s) | 910, 1749, 2283, 2481, 2482, 2491 |
| SduI | GDGCHC | 2 cut(s) | 1716, 2273 |
| SexAI | ACCWGGT | 1 cut(s) | 1747 |
| SfaNI | GCATC | 6 cut(s) | 160, 1589, 1780, 1944, 2104, 2802 |
| SfcI | CTRYAG | 1 cut(s) | 1032 |
| SfuI | TTCGAA | 1 cut(s) | 2969 |
| SmaI | CCCGGG | 1 cut(s) | 2482 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1737, 2142 |
| SmlI | CTYRAG | 5 cut(s) | 835, 1281, 1538, 2396, 2869 |
| SmoI | CTYRAG | 5 cut(s) | 835, 1281, 1538, 2396, 2869 |
| SsiI | CCGC | 5 cut(s) | 111, 283, 515, 2067, 2590 |
| SspI | AATATT | 1 cut(s) | 1138 |
| SspMI | CTAG | 9 cut(s) | 342, 462, 734, 1397, 1640, 1877, 2012, 2304, 2504 |
| StyD4I | CCNGG | 6 cut(s) | 908, 1747, 2281, 2479, 2480, 2489 |
| StyI | CCWWGG | 1 cut(s) | 1961 |
| TaaI | ACNGT | 8 cut(s) | 687, 811, 1268, 1607, 2382, 2428, 2828, 2963 |
| TaiI | ACGT | 5 cut(s) | 375, 892, 1126, 1853, 3121 |
| TatI | WGTACW | 2 cut(s) | 1534, 1829 |
| TfiI | GAWTC | 8 cut(s) | 305, 354, 1871, 2254, 2401, 2555, 2747, 2906 |
| TscAI | CASTG | 5 cut(s) | 708, 1350, 1706, 2029, 2840 |
| TseFI | GTSAC | 6 cut(s) | 699, 880, 1196, 2107, 2177, 2422 |
| TseI | GCWGC | 8 cut(s) | 118, 315, 318, 905, 1097, 2374, 2926, 2929 |
| Tsp45I | GTSAC | 6 cut(s) | 699, 880, 1196, 2107, 2177, 2422 |
| TspGWI | ACGGA | 1 cut(s) | 1727 |
| TspMI | CCCGGG | 1 cut(s) | 2480 |
| TspRI | CASTG | 5 cut(s) | 708, 1350, 1706, 2029, 2840 |
| Tth111I | GACNNNGTC | 1 cut(s) | 614 |
| VspI | ATTAAT | 2 cut(s) | 1802, 1907 |
| XapI | RAATTY | 3 cut(s) | 779, 2614, 2864 |
| XbaI | TCTAGA | 1 cut(s) | 341 |
| XceI | RCATGY | 6 cut(s) | 1010, 1424, 1765, 2108, 2141, 2692 |
| XmaI | CCCGGG | 1 cut(s) | 2480 |
| XmiI | GTMKAC | 4 cut(s) | 600, 1657, 2842, 2877 |
| XmnI | GAANNNNTTC | 2 cut(s) | 546, 2751 |
| XspI | CTAG | 9 cut(s) | 342, 462, 734, 1397, 1640, 1877, 2012, 2304, 2504 |
| ZraI | GACGTC | 1 cut(s) | 373 |
| ZrmI | AGTACT | 1 cut(s) | 1536 |
| Zsp2I | ATGCAT | 2 cut(s) | 1464, 1582 |