Rmu_sc0012293.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012293.1
Physical Location & Seq
Reverse (-)
3768 .. 5950
2183 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012293.1_g000001.1.cds

Sequence Viewer

Length: 1962 bp
atgaacattctgcctgctttgtggttgagctaccatcatctgccttcacatctgaaacgttgttttgcctattgttcgatatttcccaaaggttatgaattcaaaagctcagagttagttctgttgtggatggctgaagatctcttgcaaccgaaaagtaagataacgttggaagaagttggagagggatacttcgatattctaacctcaaggtcatttttccaacgtttatttgataattatcgtcatgaaccgattttcaccatgcatgatctcatacatgatctggcaaagtttgtatcaggagagttttctattaggttggaagaagaagagtcaatcaacattgtaagcaaagctcgtcacttttcatatatgaagacaagtgatcatggctttgcgaaatttgaggctttatatagggccaagtatctgcgcaccttcctaccattccgaccatattctccacatcaatactttccaatgtcaaataagccatttcgggagactaatcaacttgcgccatctgatgttcgagggacacggttaaaaaagatgccaccaaacatgggtaaactgaaagatctgcaacttttaactgactacatattggacaagcatagtggctgtaacattgcagagttaaaggagcttcagaagttgcgcggagcacttcatatttcagggttgcagaacattatccatgttggagatgctatgaaggccaatatgaggaacaagaagtatatcactgagctagtcttgaaatggggagatgatattgaggattcacaaaaggacagagaaatcctggagactctccaaccccatgcaaacctaaaagaacttgtgattgaattctatgggggtacaaggtttccggattggttaggagatgagtctttcacccacctagcttctgttaggttttcagattgtaagttctgttgcttcttgccaccacttgggcagttaccctccctacgaacactttggattcagagattaaatgaagtagtgtctataggtcctgagttttatggtggcaatagtaatggtgtattgaagccatttcgatctctgaaagaactgcggattatgaatatgttggagtggcgagaatgggatgatattagtggtagcacagaaggtggagtttttcctaatctttgtggtctccatgttagtaattgtcccaagctaactgagatattaccattgaataacttcccaatgcttgaatggctagagttgtggaatctggaatccttcagtggttcactctcacaagaatctcattgcattgtgaacctctttcttggtagattggaaatatggggttgcccaaattttgtaagttttcctagttatggaaggataaatgctcccaaattggcagatttggatatccgtacatgtgtgaagtttcggtcatttccagaacagatgcacacctttgccccatttcttcagcatttgaccatacgaaattgtccagaatttgaatcatttccagaagggggattaccaccggcattgaaatccctcgagtttcattgctatgaaagactcttagcaagccgcacacaatggggtctacaaagactaggctctcttaggaagttgataatcagattcaaggaatgtgaaatagatgcggattcatttcctgaggaggggatgctgcctacctccctcactcatctctccttctccaatctccccaactttatgaggatagatgggaaggagctgaaccgcctcatttctcttgaagatttgacgatattggactgccctgagctccggtgcttgccagaagaagggctcccgagttctctttcgcaactgagaatttggggatgccctttgcttgtagaacgatgccagagagacataggcaaagattggcctaagatttctcacattcctcacataaccattgatggatgtgaaatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

653

Amino Acids

75.51

Weight (kDa)

6.29

Isoelectric Point (pI)

55.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 437
AccB7I CCANNNNNTGG 1 cut(s) 965
AccI GTMKAC 1 cut(s) 1597
AccII CGCG 1 cut(s) 666
AccIII TCCGGA 1 cut(s) 880
AciI CCGC 5 cut(s) 666, 1093, 1582, 1658, 1759
AclI AACGTT 3 cut(s) 58, 167, 226
AcsI RAATTY 6 cut(s) 98, 404, 857, 1348, 1499, 1854
AcuI CTGAAG 4 cut(s) 156, 638, 1255, 1454
AfaI GTAC 2 cut(s) 871, 1414
AfiI CCNNNNNNNGG 7 cut(s) 569, 732, 965, 1370, 1520, 1676, 1823
AflIII ACRYGT 1 cut(s) 1415
AjnI CCWGG 1 cut(s) 810
AluBI AGCT 9 cut(s) 30, 108, 359, 652, 757, 917, 1201, 1753, 1804
AluI AGCT 9 cut(s) 30, 108, 359, 652, 757, 917, 1201, 1753, 1804
Alw21I GWGCWC 2 cut(s) 673, 1806
Alw26I GTCTC 4 cut(s) 500, 809, 1181, 1887
Ama87I CYCGRG 2 cut(s) 1547, 1831
Aor13HI TCCGGA 1 cut(s) 880
AoxI GGCC 3 cut(s) 423, 723, 1910
ApeKI GCWGC 1 cut(s) 1684
ApoI RAATTY 6 cut(s) 98, 404, 857, 1348, 1499, 1854
Asp700I GAANNNNTTC 2 cut(s) 1226, 1509
AspLEI GCGC 3 cut(s) 438, 523, 666
AspS9I GGNCC 2 cut(s) 423, 1028
AsuHPI GGTGA 2 cut(s) 253, 898
AvaI CYCGRG 2 cut(s) 1547, 1831
AvaII GGWCC 1 cut(s) 1028
AxyI CCTNAGG 1 cut(s) 1671
BanII GRGCYC 2 cut(s) 1806, 1830
BarI GAAGNNNNNNTAC 2 cut(s) 1509, 1541
BbsI GAAGAC 1 cut(s) 386
Bbv12I GWGCWC 2 cut(s) 673, 1806
BbvI GCAGC 1 cut(s) 1671
BccI CCATC 5 cut(s) 42, 124, 532, 1736, 1940
BciT130I CCWGG 1 cut(s) 812
BciVI GTATCC 1 cut(s) 182
BclI TGATCA 1 cut(s) 388
BcoDI GTCTC 4 cut(s) 500, 809, 1181, 1887
BfaI CTAG 5 cut(s) 758, 914, 1247, 1365, 1607
BfmI CTRYAG 1 cut(s) 1023
BfuI GTATCC 1 cut(s) 182
BglII AGATCT 2 cut(s) 139, 583
BisI GCNGC 2 cut(s) 1582, 1685
BlsI GCNGC 2 cut(s) 1583, 1686
Bme1390I CCNGG 1 cut(s) 812
Bme18I GGWCC 1 cut(s) 1028
BmeT110I CYCGRG 2 cut(s) 1547, 1831
BmgT120I GGNCC 2 cut(s) 423, 1028
BmiI GGNNCC 1 cut(s) 1829
BmrFI CCNGG 1 cut(s) 812
BmsI GCATC 7 cut(s) 546, 703, 1437, 1645, 1671, 1853, 1874
BpiI GAAGAC 1 cut(s) 386
BpmI CTGGAG 1 cut(s) 833
Bpu10I CCTNAGC 1 cut(s) 1800
BpuEI CTTGAG 1 cut(s) 193
BsaBI GATNNNNATC 1 cut(s) 240
BsaI GGTCTC 1 cut(s) 1181
BsaWI WCCGGW 2 cut(s) 880, 1806
Bsc4I CCNNNNNNNGG 7 cut(s) 569, 732, 965, 1370, 1520, 1676, 1823
Bse118I RCCGGY 1 cut(s) 1531
Bse21I CCTNAGG 1 cut(s) 1671
Bse3DI GCAATG 3 cut(s) 633, 1297, 1555
Bse8I GATNNNNATC 1 cut(s) 240
BseAI TCCGGA 1 cut(s) 880
BseBI CCWGG 1 cut(s) 812
BseGI GGATG 5 cut(s) 135, 1132, 1686, 1868, 1955
BseJI GATNNNNATC 1 cut(s) 240
BseLI CCNNNNNNNGG 7 cut(s) 569, 732, 965, 1370, 1520, 1676, 1823
BseMI GCAATG 3 cut(s) 633, 1297, 1555
BseMII CTCAG 7 cut(s) 123, 744, 1023, 1197, 1662, 1791, 1841
BseRI GAGGAG 1 cut(s) 1688
BseXI GCAGC 1 cut(s) 1671
Bsh1236I CGCG 1 cut(s) 666
BshFI GGCC 3 cut(s) 425, 725, 1912
BsiHKAI GWGCWC 2 cut(s) 673, 1806
BsiHKCI CYCGRG 2 cut(s) 1547, 1831
BsiSI CCGG 3 cut(s) 881, 1532, 1807
BslFI GGGAC 2 cut(s) 553, 1179
BslI CCNNNNNNNGG 7 cut(s) 569, 732, 965, 1370, 1520, 1676, 1823
BsmAI GTCTC 4 cut(s) 500, 809, 1181, 1887
BsmFI GGGAC 2 cut(s) 553, 1179
BsnI GGCC 3 cut(s) 425, 725, 1912
Bso31I GGTCTC 1 cut(s) 1181
BsoBI CYCGRG 2 cut(s) 1547, 1831
Bsp1286I GDGCHC 3 cut(s) 673, 1806, 1830
Bsp13I TCCGGA 1 cut(s) 880
Bsp143I GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
BspACI CCGC 5 cut(s) 666, 1093, 1582, 1658, 1759
BspANI GGCC 3 cut(s) 425, 725, 1912
BspCNI CTCAG 7 cut(s) 122, 745, 1024, 1198, 1663, 1792, 1842
BspEI TCCGGA 1 cut(s) 880
BspFNI CGCG 1 cut(s) 666
BspHI TCATGA 1 cut(s) 247
BspLI GGNNCC 1 cut(s) 1829
BspTNI GGTCTC 1 cut(s) 1181
BsrDI GCAATG 3 cut(s) 633, 1297, 1555
BsrFI RCCGGY 1 cut(s) 1531
BssAI RCCGGY 1 cut(s) 1531
BssMI GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
Bst2UI CCWGG 1 cut(s) 812
Bst4CI ACNGT 1 cut(s) 546
Bst6I CTCTTC 1 cut(s) 327
BstC8I GCNNGC 3 cut(s) 15, 1579, 1814
BstF5I GGATG 5 cut(s) 135, 1132, 1686, 1868, 1955
BstFNI CGCG 1 cut(s) 666
BstHHI GCGC 3 cut(s) 438, 523, 666
BstKTI GATC 6 cut(s) 142, 274, 286, 391, 586, 1079
BstMAI GTCTC 4 cut(s) 500, 809, 1181, 1887
BstMBI GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
BstMWI GCNNNNNNNGC 2 cut(s) 722, 1243
BstNI CCWGG 1 cut(s) 812
BstNSI RCATGY 1 cut(s) 1419
BstSCI CCNGG 1 cut(s) 810
BstSFI CTRYAG 1 cut(s) 1023
BstUI CGCG 1 cut(s) 666
BstV1I GCAGC 1 cut(s) 1671
BstV2I GAAGAC 1 cut(s) 386
BstX2I RGATCY 2 cut(s) 139, 583
BstYI RGATCY 2 cut(s) 139, 583
Bsu36I CCTNAGG 1 cut(s) 1671
BsuI GTATCC 1 cut(s) 182
BsuRI GGCC 3 cut(s) 425, 725, 1912
BtsCI GGATG 5 cut(s) 135, 1132, 1686, 1868, 1955
BtsIMutI CAGTG 2 cut(s) 750, 1279
Cac8I GCNNGC 3 cut(s) 15, 1579, 1814
CciI TCATGA 1 cut(s) 247
CfoI GCGC 3 cut(s) 438, 523, 666
Cfr10I RCCGGY 1 cut(s) 1531
Cfr13I GGNCC 2 cut(s) 423, 1028
Csp6I GTAC 2 cut(s) 870, 1413
CspCI CAANNNNNGTGG 4 cut(s) 604, 639, 1518, 1553
CviQI GTAC 2 cut(s) 870, 1413
DpnI GATC 6 cut(s) 141, 273, 285, 390, 585, 1078
DpnII GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
Eam1104I CTCTTC 1 cut(s) 327
EarI CTCTTC 1 cut(s) 327
Ecl136II GAGCTC 1 cut(s) 1804
Eco24I GRGCYC 2 cut(s) 1806, 1830
Eco31I GGTCTC 1 cut(s) 1181
Eco32I GATATC 1 cut(s) 1408
Eco47I GGWCC 1 cut(s) 1028
Eco53kI GAGCTC 1 cut(s) 1804
Eco57I CTGAAG 4 cut(s) 156, 638, 1255, 1454
Eco81I CCTNAGG 1 cut(s) 1671
Eco88I CYCGRG 2 cut(s) 1547, 1831
EcoICRI GAGCTC 1 cut(s) 1804
EcoO109I RGGNCCY 1 cut(s) 1028
EcoRI GAATTC 2 cut(s) 98, 857
EcoRII CCWGG 1 cut(s) 810
EcoRV GATATC 1 cut(s) 1408
EcoT22I ATGCAT 1 cut(s) 270
EcoT38I GRGCYC 2 cut(s) 1806, 1830
FaqI GGGAC 2 cut(s) 553, 1179
FbaI TGATCA 1 cut(s) 388
FblI GTMKAC 1 cut(s) 1597
Fnu4HI GCNGC 2 cut(s) 1582, 1685
FokI GGATG 4 cut(s) 142, 1139, 1693, 1875
FriOI GRGCYC 2 cut(s) 1806, 1830
Fsp4HI GCNGC 2 cut(s) 1582, 1685
FspBI CTAG 5 cut(s) 758, 914, 1247, 1365, 1607
FspI TGCGCA 1 cut(s) 437
GlaI GCGC 3 cut(s) 437, 522, 665
GluI GCNGC 2 cut(s) 1582, 1685
GsuI CTGGAG 1 cut(s) 833
HaeIII GGCC 3 cut(s) 425, 725, 1912
HapII CCGG 3 cut(s) 881, 1532, 1807
HhaI GCGC 3 cut(s) 438, 523, 666
Hin6I GCGC 3 cut(s) 436, 521, 664
HinP1I GCGC 3 cut(s) 436, 521, 664
HpaII CCGG 3 cut(s) 881, 1532, 1807
HphI GGTGA 2 cut(s) 253, 898
Hpy166II GTNNAC 4 cut(s) 575, 1280, 1309, 1598
Hpy188I TCNGA 9 cut(s) 54, 112, 455, 529, 657, 934, 1002, 1083, 1634
Hpy8I GTNNAC 4 cut(s) 575, 1280, 1309, 1598
HpyCH4III ACNGT 1 cut(s) 546
HpyCH4IV ACGT 3 cut(s) 58, 167, 226
HpyCH4V TGCA 8 cut(s) 148, 268, 589, 638, 691, 833, 1302, 1450
HpyF10VI GCNNNNNNNGC 2 cut(s) 722, 1243
HpySE526I ACGT 3 cut(s) 58, 167, 226
HspAI GCGC 3 cut(s) 436, 521, 664
Kpn2I TCCGGA 1 cut(s) 880
Ksp22I TGATCA 1 cut(s) 388
Kzo9I GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
LmnI GCTCC 6 cut(s) 649, 668, 1390, 1750, 1809, 1833
Lsp1109I GCAGC 1 cut(s) 1671
LweI GCATC 7 cut(s) 546, 703, 1437, 1645, 1671, 1853, 1874
MaeI CTAG 5 cut(s) 758, 914, 1247, 1365, 1607
MaeII ACGT 3 cut(s) 58, 167, 226
MaeIII GTNAC 3 cut(s) 362, 629, 972
MalI GATC 6 cut(s) 141, 273, 285, 390, 585, 1078
MboI GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
MboII GAAGA 9 cut(s) 149, 185, 338, 341, 344, 391, 1460, 1787, 1832
MflI RGATCY 2 cut(s) 139, 583
MhlI GDGCHC 3 cut(s) 673, 1806, 1830
MlyI GAGTC 4 cut(s) 344, 811, 908, 1563
MmeI TCCRAC 8 cut(s) 150, 160, 247, 303, 478, 688, 847, 1089
Mph1103I ATGCAT 1 cut(s) 270
MroI TCCGGA 1 cut(s) 880
MroXI GAANNNNTTC 2 cut(s) 1226, 1509
MseI TTAA 4 cut(s) 548, 596, 644, 1007
MslI CAYNNNNRTG 1 cut(s) 1560
MspI CCGG 3 cut(s) 881, 1532, 1807
MspR9I CCNGG 1 cut(s) 812
MvaI CCWGG 1 cut(s) 812
MvnI CGCG 1 cut(s) 666
MwoI GCNNNNNNNGC 2 cut(s) 722, 1243
NdeII GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
NlaIV GGNNCC 1 cut(s) 1829
NmuCI GTSAC 1 cut(s) 362
NsbI TGCGCA 1 cut(s) 437
NsiI ATGCAT 1 cut(s) 270
NspI RCATGY 1 cut(s) 1419
PaeR7I CTCGAG 1 cut(s) 1547
PagI TCATGA 1 cut(s) 247
PciI ACATGT 1 cut(s) 1415
PdmI GAANNNNTTC 2 cut(s) 1226, 1509
PfeI GAWTC 8 cut(s) 788, 997, 1258, 1265, 1292, 1505, 1635, 1661
PflMI CCANNNNNTGG 1 cut(s) 965
PfoI TCCNGGA 1 cut(s) 810
PkrI GCNGC 2 cut(s) 1583, 1686
PleI GAGTC 4 cut(s) 343, 811, 907, 1563
PpsI GAGTC 4 cut(s) 343, 811, 907, 1563
PpuMI RGGWCCY 1 cut(s) 1028
PscI ACATGT 1 cut(s) 1415
Psp124BI GAGCTC 1 cut(s) 1806
Psp1406I AACGTT 3 cut(s) 58, 167, 226
Psp5II RGGWCCY 1 cut(s) 1028
Psp6I CCWGG 1 cut(s) 810
PspGI CCWGG 1 cut(s) 810
PspN4I GGNNCC 1 cut(s) 1829
PspPI GGNCC 2 cut(s) 423, 1028
PspPPI RGGWCCY 1 cut(s) 1028
PspXI VCTCGAGB 1 cut(s) 1547
PsuI RGATCY 2 cut(s) 139, 583
RsaI GTAC 2 cut(s) 871, 1414
RsaNI GTAC 2 cut(s) 870, 1413
RseI CAYNNNNRTG 1 cut(s) 1560
SacI GAGCTC 1 cut(s) 1806
SaqAI TTAA 4 cut(s) 548, 596, 644, 1007
SatI GCNGC 2 cut(s) 1582, 1685
Sau3AI GATC 6 cut(s) 139, 271, 283, 388, 583, 1076
Sau96I GGNCC 2 cut(s) 423, 1028
SchI GAGTC 4 cut(s) 344, 811, 908, 1563
ScrFI CCNGG 1 cut(s) 812
SduI GDGCHC 3 cut(s) 673, 1806, 1830
SfaNI GCATC 7 cut(s) 546, 703, 1437, 1645, 1671, 1853, 1874
SfcI CTRYAG 1 cut(s) 1023
Sfr274I CTCGAG 1 cut(s) 1547
SinI GGWCC 1 cut(s) 1028
SlaI CTCGAG 1 cut(s) 1547
SmiMI CAYNNNNRTG 1 cut(s) 1560
SmlI CTYRAG 2 cut(s) 208, 1547
SmoI CTYRAG 2 cut(s) 208, 1547
SsiI CCGC 5 cut(s) 666, 1093, 1582, 1658, 1759
SspMI CTAG 5 cut(s) 758, 914, 1247, 1365, 1607
SstI GAGCTC 1 cut(s) 1806
StyD4I CCNGG 1 cut(s) 810
TaaI ACNGT 1 cut(s) 546
TaiI ACGT 3 cut(s) 61, 170, 229
TaqI TCGA 5 cut(s) 77, 195, 535, 1075, 1548
TaqII GACCGA 1 cut(s) 1419
TauI GCSGC 1 cut(s) 1584
TfiI GAWTC 8 cut(s) 788, 997, 1258, 1265, 1292, 1505, 1635, 1661
Tru1I TTAA 4 cut(s) 548, 596, 644, 1007
Tru9I TTAA 4 cut(s) 548, 596, 644, 1007
TscAI CASTG 2 cut(s) 757, 1279
TseFI GTSAC 1 cut(s) 362
TseI GCWGC 1 cut(s) 1684
Tsp45I GTSAC 1 cut(s) 362
TspGWI ACGGA 1 cut(s) 1400
TspRI CASTG 2 cut(s) 757, 1279
Van91I CCANNNNNTGG 1 cut(s) 965
VpaK11BI GGWCC 1 cut(s) 1028
XapI RAATTY 6 cut(s) 98, 404, 857, 1348, 1499, 1854
XceI RCATGY 1 cut(s) 1419
XcmI CCANNNNNNNNNTGG 1 cut(s) 1239
XhoI CTCGAG 1 cut(s) 1547
XmiI GTMKAC 1 cut(s) 1597
XmnI GAANNNNTTC 2 cut(s) 1226, 1509
XspI CTAG 5 cut(s) 758, 914, 1247, 1365, 1607
Zsp2I ATGCAT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.