Rmu_sc0003363.1_g000019

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003363.1
Physical Location & Seq
Forward (+)
97948 .. 101845
3898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003363.1_g000019.1.cds

Sequence Viewer

Length: 3729 bp
atggctcagttccgaggtcacaagtcctccctttccaggtatacttcctctcgttatccatataggtatcacgtgttcctgagcttcagaggtgaagacacccgaaagaacttcactgatcacctctacatggcccttgtcaacgccggatttgagactttcagggatgacccagaaatcgagagaggggaaaatgtcaaggaaaggcttgagaatggcattcaacagtcacgaagttccgtgattgtgttttcaaaagactacacctcttccagatggtgtctggatgagcttgtcatgattcttgaacgcaagaggacctccgatcatgtcgtgttcccggtctactatgatattgctccatctcaattgaggaagcaggcagaaactctttcaaaggttcctaaataccaagaaaatcaatcgtcggtgaagttgaatggatggcgggcagcgcttggagaagttgcagatctagcaggaaatgttttaaaaaatgaagctgacgggtacgagtcaaagttcatccaaaaaattgttacagtgattcaagacaagataggtcgtgtgcccctgaccgatgtccaggaggtgttacagaagaagttgttgtttataaacccttacctcgatcacgccgaggggaagcaactgaaattcccaactgtgaaggcatggctcaatgagcttaaagaagctgtctatgataccaaggacctattgcaggagatcaagacagaagcattaagacgaaagatggaacccgaatctggaagtagcacgagtaaggtacaagacctcaactctagtcttccatttcatgcttttgattcagcatcaatataccggagggctgaggaatttcataagaaactagactccattatggagcggagaagagacgtcttcggtatggaagcaactgttggatacaggatatcacaaaaaacatcgtcaacttcttttctcgaagactctagtgtgtttggtagagatgatgagaaggagacacttattgaattgttgctatcagatgatgagagtggcaataagataagtgtgattcctattgtaggtatgggtgggatcggaaagaccacccttgcccaatttttgtacaacgatgatagagttgaacaacattttgacaaaaaagcatgggcttctgtttctgaaaaatttgatgttctccagatctcaaaaaaaatttatgagtcccttactttaaaggcctgcgacgttcagtacttagatccacttcagttaatattgaaggcggaattgaaggggaaaaaggttttctttgttcttgatgacgtgtggaataagagttatactgaatgggagaagttaaggcgtccttttcaatttggagcacctggaagtaagattattgtcacaacacgcaatcaagatgttgcacgtatggtgtgtacttttcaagctcactgtctcaggccactgtctgcagaagatagctggtcattatttgaaaaacatgctatcaaaaatacaggtgttggtccacacacacatcttgaagaaataggtagacaaattgtacaaaagtgcaatggtcttcctttggctattaagtcccttgggggtctgttatgttctaaatcaactgtgaaggaatgggaaagtatattgtacagtgagatgtgggagttgccacaggaggagagtggcattctgccatctctttggttgagctatatgtacctgccttcccaactcaaacattgttttgcatattgttcgatatttcccaagaactatgtgttcaaaacatcaaaaatattggtttacttgtggatggctgaagatctattgcaacctaaaaaacacaaaactgcagaagaaatcggacaagattacttcaatgatctaatctcaatgtcattttttcaagtttcatcaaggtccgatcaatatatcatgcatgaccttatcaatgatctagcaagctttgtatcaggagaattttgttttaggtgggagggcagtgattcacccaacaatttgagcaagactcgtcacttttcatgtatgtcgggatatcttactgcaacggctggtggcctagagatgtttgaggctttacagcaagctaaacatttgcacacctttctacaattagatccatattcgtcggtgttgtcgataatagctccctacaaggcgaacaaaggactttacgaggcattgccaaagtttcaatgtttaagaatgcttaagttatcatggtacaaaaacaagaaattgcctgattcaattaacaacttgaaacatcttaagcacttggacttgtcttacagttgcatccgtaagttacctgatacaatttgtactttgtataacttgcaagtattgttgttgtcagactgtggctaccttactaaactgccagccaacttgggaagattgatcaacttgagccatctggatattgactgtacacccttggaaaagatgccaccgtacatgggtaatttgaaagacctccagatgctaccagagtttgtgctcgacaaatacactgctggggataatttgccagagttaaagaatcttcaaaatttgcgtggaagtcttcgtatctcagggcttgggcatagcagcggtttggaggcctacatactgagggacaagaagtttcttaaggaactggttttggattggggagaagaacaggaaacagaagaagaagtgtcaagtgaagaaggcaataatactgtagaagaagtgcttgagaagctccaacctcacctggattggggagaagaagaggaaacaaaagaagaagagtcaagtgaagaaggcaataatactgtagaagaagtgcttgagaagctccaacctcacctgaatctggaaaggcttacaattatagattatggaggcaaaatgtttccaggttggtcagaatattattcttcctctgctcttgtttatcttagactttttaattgtcagaattgtatctccttgccaccattgagacaactaccttccctcagagagcttgaaattcgggagttgagtgggtggcaagaatggtctgatgttggaggtgacgatattgaaggtggggcttttcctaatctagagaaacttgacgtgggtgactgtcccaatcttactgggagattagcatcagacagtctcccatctcttctgtctttgaagtcatggaaatgcccagaatttgaatgttttccggaatatggattcccatcaaagttaaaatcactttggatcgggtactgtaaaaaagtgaatgcagagagcatgcagaatctgaacaagggtctccgaacactcacctctcttgaagaattgtcacttgattttgacagcggcgaaaaattagattggtttgcggaggagctgtttcccagcactctcacatatctcaagattcgccgtctgaattgtgagactatcgacggcgccaagtggtttggccatctaaactctctccaaaaattggctatttgggactgccctaggctccggtgcttgccatatagtgggctacccacttcccttcaacacttggagattctagattgccctgctctacagtgcttgccagagagtggactaccctcttctctttctgatcttctcatccatggttgccctttgcttcagaaacgatgccaaagagagacgggtgaagattggcccaagattgctcacatcaagcacttagctatctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1242

Amino Acids

142.12

Weight (kDa)

5.7

Isoelectric Point (pI)

52.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 617
AatII GACGTC 1 cut(s) 906
Acc36I ACCTGC 1 cut(s) 1734
AccB1I GGYRCC 1 cut(s) 3455
AccB7I CCANNNNNTGG 3 cut(s) 3493, 3536, 3605
AccBSI CCGCTC 1 cut(s) 892
AccI GTMKAC 3 cut(s) 41, 345, 1552
AccIII TCCGGA 1 cut(s) 3223
AciI CCGC 6 cut(s) 448, 892, 1277, 2625, 3363, 3386
AclWI GGATC 4 cut(s) 1094, 1247, 2138, 3269
AcoI YGGCCR 1 cut(s) 3469
AcsI RAATTY 8 cut(s) 656, 860, 1178, 1206, 1985, 2581, 3033, 3209
AcuI CTGAAG 4 cut(s) 70, 1244, 1845, 3641
AcvI CACGTG 1 cut(s) 73
AcyI GRCGYC 3 cut(s) 903, 1357, 3456
AfeI AGCGCT 1 cut(s) 456
AflII CTTAAG 3 cut(s) 2237, 2297, 2663
AflIII ACRYGT 2 cut(s) 72, 1317
AjiI CACGTC 2 cut(s) 1318, 3124
AjnI CCWGG 5 cut(s) 35, 585, 1378, 2772, 2917
AjuI GAANNNNNNNTTGG 2 cut(s) 909, 941
Alw21I GWGCWC 2 cut(s) 1378, 2532
Alw26I GTCTC 9 cut(s) 149, 894, 1001, 1457, 2998, 3173, 3320, 3437, 3671
AlwI GGATC 4 cut(s) 1094, 1247, 2138, 3269
AlwNI CAGNNNCTG 1 cut(s) 3304
Aor13HI TCCGGA 1 cut(s) 3223
Aor51HI AGCGCT 1 cut(s) 456
AoxI GGCC 7 cut(s) 132, 1230, 1457, 2083, 2634, 3469, 3692
ApeKI GCWGC 2 cut(s) 452, 2622
ApoI RAATTY 8 cut(s) 656, 860, 1178, 1206, 1985, 2581, 3033, 3209
Asp700I GAANNNNTTC 1 cut(s) 3219
AspA2I CCTAGG 1 cut(s) 3512
AspLEI GCGC 2 cut(s) 457, 3458
AspS9I GGNCC 6 cut(s) 133, 318, 715, 1523, 1926, 3693
AsuC2I CCSGG 1 cut(s) 341
AvaII GGWCC 4 cut(s) 318, 715, 1523, 1926
AvrII CCTAGG 1 cut(s) 3512
BaeGI GKGCMC 1 cut(s) 573
BalI TGGCCA 1 cut(s) 3471
BanI GGYRCC 1 cut(s) 3455
BauI CACGAG 1 cut(s) 781
BbrPI CACGTG 1 cut(s) 73
BbsI GAAGAC 6 cut(s) 102, 803, 898, 978, 1571, 2588
Bbv12I GWGCWC 2 cut(s) 1378, 2532
BbvCI CCTCAGC 1 cut(s) 855
BbvI GCAGC 2 cut(s) 464, 2634
BceAI ACGGC 3 cut(s) 2091, 3414, 3469
BcgI CGANNNNNNTGC 2 cut(s) 1743, 1777
BciT130I CCWGG 5 cut(s) 37, 587, 1380, 2774, 2919
BciVI GTATCC 1 cut(s) 923
BclI TGATCA 2 cut(s) 118, 2430
BcnI CCSGG 1 cut(s) 341
BcoDI GTCTC 9 cut(s) 149, 894, 1001, 1457, 2998, 3173, 3320, 3437, 3671
BfaI CTAG 9 cut(s) 476, 807, 875, 978, 1964, 2087, 3110, 3513, 3572
BfmI CTRYAG 5 cut(s) 1467, 1857, 2739, 2835, 3587
BfoI RGCGCY 2 cut(s) 458, 3459
BfrI CTTAAG 3 cut(s) 2237, 2297, 2663
BfuAI ACCTGC 1 cut(s) 1734
BfuI GTATCC 1 cut(s) 923
BglII AGATCT 3 cut(s) 472, 1194, 1828
BisI GCNGC 3 cut(s) 453, 2623, 3364
BlnI CCTAGG 1 cut(s) 3512
BlsI GCNGC 3 cut(s) 454, 2624, 3365
BmcAI AGTACT 1 cut(s) 1247
Bme1390I CCNGG 6 cut(s) 37, 341, 587, 1380, 2774, 2919
Bme18I GGWCC 4 cut(s) 318, 715, 1523, 1926
BmgBI CACGTC 2 cut(s) 1318, 3124
BmgT120I GGNCC 6 cut(s) 133, 318, 715, 1523, 1926, 3693
BmiI GGNNCC 4 cut(s) 402, 762, 3457, 3518
BmrFI CCNGG 6 cut(s) 37, 341, 587, 1380, 2774, 2919
BmrI ACTGGG 1 cut(s) 3156
BmsI GCATC 6 cut(s) 845, 2334, 2466, 2502, 3167, 3656
BmuI ACTGGG 1 cut(s) 3156
BoxI GACNNNNGTC 1 cut(s) 581
BpiI GAAGAC 6 cut(s) 102, 803, 898, 978, 1571, 2588
BplI GAGNNNNNCTC 2 cut(s) 2020, 2052
BpmI CTGGAG 2 cut(s) 1175, 2492
Bpu10I CCTNAGC 2 cut(s) 80, 855
BpuEI CTTGAG 5 cut(s) 230, 2458, 2774, 2870, 3404
BpuMI CCSGG 1 cut(s) 341
BsaAI YACGTR 2 cut(s) 73, 1424
BsaBI GATNNNNATC 2 cut(s) 3157, 3238
BsaHI GRCGYC 3 cut(s) 903, 1357, 3456
BsaI GGTCTC 1 cut(s) 3320
BsaJI CCNNGG 7 cut(s) 13, 639, 711, 1600, 2466, 3512, 3640
BsaWI WCCGGW 3 cut(s) 846, 3223, 3519
BsaXI ACNNNNNCTCC 4 cut(s) 11, 41, 3380, 3410
Bse1I ACTGG 2 cut(s) 2676, 3151
Bse3DI GCAATG 2 cut(s) 1579, 2207
Bse8I GATNNNNATC 2 cut(s) 3157, 3238
BseAI TCCGGA 1 cut(s) 3223
BseBI CCWGG 5 cut(s) 37, 587, 1380, 2774, 2919
BseDI CCNNGG 7 cut(s) 13, 639, 711, 1600, 2466, 3512, 3640
BseGI GGATG 7 cut(s) 172, 292, 449, 525, 1824, 2325, 3636
BseJI GATNNNNATC 2 cut(s) 3157, 3238
BseMI GCAATG 2 cut(s) 1579, 2207
BseMII CTCAG 7 cut(s) 20, 71, 846, 1468, 2619, 2636, 3034
BseNI ACTGG 2 cut(s) 2676, 3151
BseRI GAGGAG 2 cut(s) 1697, 3404
BseSI GKGCMC 1 cut(s) 573
BseXI GCAGC 2 cut(s) 464, 2634
BseYI CCCAGC 2 cut(s) 2546, 3401
BshFI GGCC 7 cut(s) 134, 1232, 1459, 2085, 2636, 3471, 3694
BshNI GGYRCC 1 cut(s) 3455
BsiHKAI GWGCWC 2 cut(s) 1378, 2532
BsiSI CCGG 5 cut(s) 147, 341, 847, 3224, 3520
BslFI GGGAC 5 cut(s) 1201, 1582, 2663, 3120, 3518
BsmAI GTCTC 9 cut(s) 149, 894, 1001, 1457, 2998, 3173, 3320, 3437, 3671
BsmBI CGTCTC 2 cut(s) 894, 3671
BsmFI GGGAC 5 cut(s) 1201, 1582, 2663, 3120, 3518
BsmI GAATGC 4 cut(s) 219, 1692, 2238, 3289
BsnI GGCC 7 cut(s) 134, 1232, 1459, 2085, 2636, 3471, 3694
Bso31I GGTCTC 1 cut(s) 3320
Bsp1286I GDGCHC 3 cut(s) 573, 1378, 2532
Bsp13I TCCGGA 1 cut(s) 3223
Bsp1407I TGTACA 4 cut(s) 1116, 1561, 1653, 2459
Bsp19I CCATGG 1 cut(s) 3640
BspACI CCGC 6 cut(s) 448, 892, 1277, 2625, 3363, 3386
BspANI GGCC 7 cut(s) 134, 1232, 1459, 2085, 2636, 3471, 3694
BspCNI CTCAG 7 cut(s) 19, 72, 847, 1467, 2618, 2637, 3033
BspEI TCCGGA 1 cut(s) 3223
BspHI TCATGA 1 cut(s) 297
BspLI GGNNCC 4 cut(s) 402, 762, 3457, 3518
BspMAI CTGCAG 2 cut(s) 1471, 1861
BspMI ACCTGC 1 cut(s) 1734
BspPI GGATC 4 cut(s) 1094, 1247, 2138, 3269
BspT107I GGYRCC 1 cut(s) 3455
BspTI CTTAAG 3 cut(s) 2237, 2297, 2663
BspTNI GGTCTC 1 cut(s) 3320
BsrBI CCGCTC 1 cut(s) 892
BsrDI GCAATG 2 cut(s) 1579, 2207
BsrGI TGTACA 4 cut(s) 1116, 1561, 1653, 2459
BsrI ACTGG 2 cut(s) 2676, 3151
BssECI CCNNGG 7 cut(s) 13, 639, 711, 1600, 2466, 3512, 3640
BssNAI GTATAC 1 cut(s) 42
BssNI GRCGYC 3 cut(s) 903, 1357, 3456
BssSI CACGAG 1 cut(s) 781
BssT1I CCWWGG 5 cut(s) 711, 1600, 2466, 3512, 3640
Bst1107I GTATAC 1 cut(s) 42
Bst2BI CACGAG 1 cut(s) 781
Bst2UI CCWGG 5 cut(s) 37, 587, 1380, 2774, 2919
Bst6I CTCTTC 6 cut(s) 274, 892, 2784, 2802, 3183, 3622
BstACI GRCGYC 3 cut(s) 903, 1357, 3456
BstAFI CTTAAG 3 cut(s) 2237, 2297, 2663
BstAUI TGTACA 4 cut(s) 1116, 1561, 1653, 2459
BstBAI YACGTR 2 cut(s) 73, 1424
BstC8I GCNNGC 9 cut(s) 381, 450, 1234, 1969, 2112, 2412, 3296, 3527, 3596
BstDSI CCRYGG 1 cut(s) 3640
BstENI CCTNNNNNAGG 2 cut(s) 722, 1071
BstF5I GGATG 7 cut(s) 172, 292, 449, 525, 1824, 2325, 3636
BstH2I RGCGCY 2 cut(s) 458, 3459
BstHHI GCGC 2 cut(s) 457, 3458
BstMAI GTCTC 9 cut(s) 149, 894, 1001, 1457, 2998, 3173, 3320, 3437, 3671
BstMWI GCNNNNNNNGC 5 cut(s) 454, 476, 685, 2758, 2854
BstNI CCWGG 5 cut(s) 37, 587, 1380, 2774, 2919
BstNSI RCATGY 2 cut(s) 1502, 3298
BstPAI GACNNNNGTC 1 cut(s) 581
BstSCI CCNGG 6 cut(s) 35, 339, 585, 1378, 2772, 2917
BstSFI CTRYAG 5 cut(s) 1467, 1857, 2739, 2835, 3587
BstSLI GKGCMC 1 cut(s) 573
BstV1I GCAGC 2 cut(s) 464, 2634
BstV2I GAAGAC 6 cut(s) 102, 803, 898, 978, 1571, 2588
BstX2I RGATCY 5 cut(s) 472, 1194, 1252, 1828, 2143
BstXI CCANNNNNNTGG 1 cut(s) 1707
BstYI RGATCY 5 cut(s) 472, 1194, 1252, 1828, 2143
BstZ17I GTATAC 1 cut(s) 42
BsuI GTATCC 1 cut(s) 923
BsuRI GGCC 7 cut(s) 134, 1232, 1459, 2085, 2636, 3471, 3694
BtgI CCRYGG 1 cut(s) 3640
BtrI CACGTC 2 cut(s) 1318, 3124
BtsCI GGATG 7 cut(s) 172, 292, 449, 525, 1824, 2325, 3636
BtsI GCAGTG 2 cut(s) 2014, 2541
BtsIMutI CAGTG 8 cut(s) 114, 549, 1447, 1460, 1663, 2014, 2541, 3596
BveI ACCTGC 1 cut(s) 1734
Cac8I GCNNGC 9 cut(s) 381, 450, 1234, 1969, 2112, 2412, 3296, 3527, 3596
CaiI CAGNNNCTG 1 cut(s) 3304
CciI TCATGA 1 cut(s) 297
CfoI GCGC 2 cut(s) 457, 3458
Cfr13I GGNCC 6 cut(s) 133, 318, 715, 1523, 1926, 3693
CseI GACGC 1 cut(s) 1346
DinI GGCGCC 1 cut(s) 3457
DraI TTTAAA 2 cut(s) 492, 1227
EaeI YGGCCR 1 cut(s) 3469
Eam1104I CTCTTC 6 cut(s) 274, 892, 2784, 2802, 3183, 3622
EarI CTCTTC 6 cut(s) 274, 892, 2784, 2802, 3183, 3622
EciI GGCGGA 1 cut(s) 1292
Eco130I CCWWGG 5 cut(s) 711, 1600, 2466, 3512, 3640
Eco147I AGGCCT 2 cut(s) 1232, 2636
Eco31I GGTCTC 1 cut(s) 3320
Eco32I GATATC 2 cut(s) 939, 2063
Eco47I GGWCC 4 cut(s) 318, 715, 1523, 1926
Eco47III AGCGCT 1 cut(s) 456
Eco57I CTGAAG 4 cut(s) 70, 1244, 1845, 3641
Eco72I CACGTG 1 cut(s) 73
EcoNI CCTNNNNNAGG 2 cut(s) 722, 1071
EcoO109I RGGNCCY 2 cut(s) 318, 715
EcoRII CCWGG 5 cut(s) 35, 585, 1378, 2772, 2917
EcoRV GATATC 2 cut(s) 939, 2063
EcoT14I CCWWGG 5 cut(s) 711, 1600, 2466, 3512, 3640
EcoT22I ATGCAT 1 cut(s) 1947
EgeI GGCGCC 1 cut(s) 3457
EheI GGCGCC 1 cut(s) 3457
ErhI CCWWGG 5 cut(s) 711, 1600, 2466, 3512, 3640
Esp3I CGTCTC 2 cut(s) 894, 3671
FalI AAGNNNNNCTT 8 cut(s) 1286, 1318, 1345, 1377, 2736, 2768, 2832, 2864
FaqI GGGAC 5 cut(s) 1201, 1582, 2663, 3120, 3518
FauI CCCGC 1 cut(s) 441
FbaI TGATCA 2 cut(s) 118, 2430
FblI GTMKAC 3 cut(s) 41, 345, 1552
Fnu4HI GCNGC 3 cut(s) 453, 2623, 3364
FokI GGATG 7 cut(s) 179, 299, 456, 512, 1831, 2312, 3623
Fsp4HI GCNGC 3 cut(s) 453, 2623, 3364
FspBI CTAG 9 cut(s) 476, 807, 875, 978, 1964, 2087, 3110, 3513, 3572
GlaI GCGC 2 cut(s) 456, 3457
GluI GCNGC 3 cut(s) 453, 2623, 3364
GsaI CCCAGC 2 cut(s) 2550, 3405
GsuI CTGGAG 2 cut(s) 1175, 2492
HaeII RGCGCY 2 cut(s) 458, 3459
HaeIII GGCC 7 cut(s) 134, 1232, 1459, 2085, 2636, 3471, 3694
HapII CCGG 5 cut(s) 147, 341, 847, 3224, 3520
HgaI GACGC 1 cut(s) 1346
HhaI GCGC 2 cut(s) 457, 3458
Hin1I GRCGYC 3 cut(s) 903, 1357, 3456
Hin6I GCGC 2 cut(s) 455, 3456
HinP1I GCGC 2 cut(s) 455, 3456
HincII GTYRAC 2 cut(s) 142, 957
HindII GTYRAC 2 cut(s) 142, 957
HindIII AAGCTT 1 cut(s) 1969
HpaII CCGG 5 cut(s) 147, 341, 847, 3224, 3520
Hpy99I CGWCG 4 cut(s) 430, 1241, 2158, 3455
HpyCH4IV ACGT 6 cut(s) 72, 903, 1239, 1317, 1423, 3123
HpyF10VI GCNNNNNNNGC 5 cut(s) 454, 476, 685, 2758, 2854
HpySE526I ACGT 6 cut(s) 72, 903, 1239, 1317, 1423, 3123
Hsp92I GRCGYC 3 cut(s) 903, 1357, 3456
HspAI GCGC 2 cut(s) 455, 3456
KasI GGCGCC 1 cut(s) 3455
Kpn2I TCCGGA 1 cut(s) 3223
Ksp22I TGATCA 2 cut(s) 118, 2430
LmnI GCTCC 8 cut(s) 364, 889, 1373, 2179, 2766, 2862, 3391, 3522
Lsp1109I GCAGC 2 cut(s) 464, 2634
LweI GCATC 6 cut(s) 845, 2334, 2466, 2502, 3167, 3656
MaeI CTAG 9 cut(s) 476, 807, 875, 978, 1964, 2087, 3110, 3513, 3572
MaeII ACGT 6 cut(s) 72, 903, 1239, 1317, 1423, 3123
MbiI CCGCTC 1 cut(s) 892
MfeI CAATTG 1 cut(s) 368
MflI RGATCY 5 cut(s) 472, 1194, 1252, 1828, 2143
MhlI GDGCHC 3 cut(s) 573, 1378, 2532
MlsI TGGCCA 1 cut(s) 3471
MluNI TGGCCA 1 cut(s) 3471
Mly113I GGCGCC 1 cut(s) 3456
MlyI GAGTC 6 cut(s) 524, 872, 968, 1223, 2029, 2819
MmeI TCCRAC 4 cut(s) 907, 2788, 2884, 3052
Mox20I TGGCCA 1 cut(s) 3471
Mph1103I ATGCAT 1 cut(s) 1947
MroI TCCGGA 1 cut(s) 3223
MroXI GAANNNNTTC 1 cut(s) 3219
MscI TGGCCA 1 cut(s) 3471
MslI CAYNNNNRTG 1 cut(s) 3199
Msp20I TGGCCA 1 cut(s) 3471
MspA1I CMGCKG 2 cut(s) 2625, 3363
MspCI CTTAAG 3 cut(s) 2237, 2297, 2663
MspI CCGG 5 cut(s) 147, 341, 847, 3224, 3520
MspR9I CCNGG 6 cut(s) 37, 341, 587, 1380, 2774, 2919
MunI CAATTG 1 cut(s) 368
Mva1269I GAATGC 4 cut(s) 219, 1692, 2238, 3289
MvaI CCWGG 5 cut(s) 37, 587, 1380, 2774, 2919
MwoI GCNNNNNNNGC 5 cut(s) 454, 476, 685, 2758, 2854
NarI GGCGCC 1 cut(s) 3456
NciI CCSGG 1 cut(s) 341
NcoI CCATGG 1 cut(s) 3640
NlaIV GGNNCC 4 cut(s) 402, 762, 3457, 3518
NmeAIII GCCGAG 1 cut(s) 664
NmuCI GTSAC 7 cut(s) 17, 228, 1396, 2039, 3077, 3128, 3345
NsiI ATGCAT 1 cut(s) 1947
NspI RCATGY 2 cut(s) 1502, 3298
PaeI GCATGC 1 cut(s) 3298
PagI TCATGA 1 cut(s) 297
PceI AGGCCT 2 cut(s) 1232, 2636
PcsI WCGNNNNNNNCGW 2 cut(s) 636, 2162
PctI GAATGC 4 cut(s) 219, 1692, 2238, 3289
PdmI GAANNNNTTC 1 cut(s) 3219
PflMI CCANNNNNTGG 3 cut(s) 3493, 3536, 3605
PfoI TCCNGGA 1 cut(s) 585
PkrI GCNGC 3 cut(s) 454, 2624, 3365
PleI GAGTC 6 cut(s) 523, 872, 968, 1222, 2029, 2818
PluTI GGCGCC 1 cut(s) 3459
PmaCI CACGTG 1 cut(s) 73
PmlI CACGTG 1 cut(s) 73
PpsI GAGTC 6 cut(s) 523, 872, 968, 1222, 2029, 2818
Ppu21I YACGTR 2 cut(s) 73, 1424
PpuMI RGGWCCY 2 cut(s) 318, 715
PshAI GACNNNNGTC 1 cut(s) 581
PsiI TTATAA 1 cut(s) 617
Psp5II RGGWCCY 2 cut(s) 318, 715
Psp6I CCWGG 5 cut(s) 35, 585, 1378, 2772, 2917
PspCI CACGTG 1 cut(s) 73
PspFI CCCAGC 2 cut(s) 2546, 3401
PspGI CCWGG 5 cut(s) 35, 585, 1378, 2772, 2917
PspN4I GGNNCC 4 cut(s) 402, 762, 3457, 3518
PspPI GGNCC 6 cut(s) 133, 318, 715, 1523, 1926, 3693
PspPPI RGGWCCY 2 cut(s) 318, 715
PsrI GAACNNNNNNTAC 2 cut(s) 59, 91
PstI CTGCAG 2 cut(s) 1471, 1861
PstNI CAGNNNCTG 1 cut(s) 3304
PsuI RGATCY 5 cut(s) 472, 1194, 1252, 1828, 2143
RseI CAYNNNNRTG 1 cut(s) 3199
SatI GCNGC 3 cut(s) 453, 2623, 3364
Sau96I GGNCC 6 cut(s) 133, 318, 715, 1523, 1926, 3693
ScaI AGTACT 1 cut(s) 1247
SchI GAGTC 6 cut(s) 524, 872, 968, 1223, 2029, 2819
ScrFI CCNGG 6 cut(s) 37, 341, 587, 1380, 2774, 2919
SduI GDGCHC 3 cut(s) 573, 1378, 2532
SfaNI GCATC 6 cut(s) 845, 2334, 2466, 2502, 3167, 3656
SfcI CTRYAG 5 cut(s) 1467, 1857, 2739, 2835, 3587
SfoI GGCGCC 1 cut(s) 3457
SinI GGWCC 4 cut(s) 318, 715, 1523, 1926
SmiMI CAYNNNNRTG 1 cut(s) 3199
SmlI CTYRAG 8 cut(s) 209, 2237, 2297, 2437, 2663, 2753, 2849, 3419
SmoI CTYRAG 8 cut(s) 209, 2237, 2297, 2437, 2663, 2753, 2849, 3419
SphI GCATGC 1 cut(s) 3298
SseBI AGGCCT 2 cut(s) 1232, 2636
SsiI CCGC 6 cut(s) 448, 892, 1277, 2625, 3363, 3386
SspDI GGCGCC 1 cut(s) 3455
SspI AATATT 3 cut(s) 1269, 1803, 2933
SspMI CTAG 9 cut(s) 476, 807, 875, 978, 1964, 2087, 3110, 3513, 3572
StuI AGGCCT 2 cut(s) 1232, 2636
StyD4I CCNGG 6 cut(s) 35, 339, 585, 1378, 2772, 2917
StyI CCWWGG 5 cut(s) 711, 1600, 2466, 3512, 3640
TaiI ACGT 6 cut(s) 75, 906, 1242, 1320, 1426, 3126
TaqI TCGA 7 cut(s) 180, 630, 969, 1763, 2165, 2532, 3450
TaqII GACCGA 1 cut(s) 593
TatI WGTACW 7 cut(s) 1116, 1245, 1433, 1561, 1653, 2351, 2459
TauI GCSGC 1 cut(s) 3366
TscAI CASTG 8 cut(s) 121, 549, 1454, 1467, 1663, 2014, 2548, 3596
TseFI GTSAC 7 cut(s) 17, 228, 1396, 2039, 3077, 3128, 3345
TseI GCWGC 2 cut(s) 452, 2622
Tsp45I GTSAC 7 cut(s) 17, 228, 1396, 2039, 3077, 3128, 3345
TspDTI ATGAA 6 cut(s) 513, 514, 809, 854, 1908, 2037
TspGWI ACGGA 2 cut(s) 229, 2318
TspRI CASTG 8 cut(s) 121, 549, 1454, 1467, 1663, 2014, 2548, 3596
Van91I CCANNNNNTGG 3 cut(s) 3493, 3536, 3605
Vha464I CTTAAG 3 cut(s) 2237, 2297, 2663
VpaK11BI GGWCC 4 cut(s) 318, 715, 1523, 1926
XagI CCTNNNNNAGG 2 cut(s) 722, 1071
XapI RAATTY 8 cut(s) 656, 860, 1178, 1206, 1985, 2581, 3033, 3209
XbaI TCTAGA 2 cut(s) 3109, 3571
XceI RCATGY 2 cut(s) 1502, 3298
XcmI CCANNNNNNNNNTGG 1 cut(s) 280
XmaJI CCTAGG 1 cut(s) 3512
XmiI GTMKAC 3 cut(s) 41, 345, 1552
XmnI GAANNNNTTC 1 cut(s) 3219
XspI CTAG 9 cut(s) 476, 807, 875, 978, 1964, 2087, 3110, 3513, 3572
ZraI GACGTC 1 cut(s) 904
ZrmI AGTACT 1 cut(s) 1247
Zsp2I ATGCAT 1 cut(s) 1947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.