disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 30 - 100 | 5.3e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 176 - 347 | 1.2e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 430 - 498 | 1.3e-25 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 576 - 915 | 4.3e-28 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 688 - 810 | 2.6e-33 | R13L1/DRL21 LRRs |
| LRR_14 | PF23598 | 935 - 1110 | 1.9e-06 | Leucine-rich repeat region |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 354, 1869 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 2278, 2794 |
| Acc36I | ACCTGC | 1 cut(s) | 2407 |
| AccB1I | GGYRCC | 1 cut(s) | 2533 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1622, 2387 |
| AccII | CGCG | 1 cut(s) | 1423 |
| AciI | CCGC | 4 cut(s) | 2849, 2937, 3309, 3453 |
| AclWI | GGATC | 5 cut(s) | 876, 1203, 1458, 1536, 3039 |
| AcuI | CTGAAG | 5 cut(s) | 146, 2171, 2786, 3005, 3659 |
| AfaI | GTAC | 4 cut(s) | 502, 704, 1861, 2232 |
| AflII | CTTAAG | 1 cut(s) | 2576 |
| AflIII | ACRYGT | 3 cut(s) | 937, 1631, 3319 |
| AjiI | CACGTC | 1 cut(s) | 2949 |
| AjnI | CCWGG | 3 cut(s) | 309, 831, 3177 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2696, 2728, 3432, 3464 |
| Alw21I | GWGCWC | 8 cut(s) | 159, 219, 666, 957, 2415, 3151, 3525, 3546 |
| Alw44I | GTGCAC | 1 cut(s) | 953 |
| AlwI | GGATC | 5 cut(s) | 876, 1203, 1458, 1536, 3039 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3121, 3192 |
| Ama87I | CYCGRG | 1 cut(s) | 2755 |
| AoxI | GGCC | 1 cut(s) | 3003 |
| ApaLI | GTGCAC | 1 cut(s) | 953 |
| ApeKI | GCWGC | 3 cut(s) | 547, 2791, 3558 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1292, 1324, 3335, 3367 |
| AseI | ATTAAT | 1 cut(s) | 2817 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2101, 2241 |
| AspLEI | GCGC | 1 cut(s) | 1809 |
| AspS9I | GGNCC | 4 cut(s) | 2132, 3004, 3060, 3289 |
| AsuC2I | CCSGG | 5 cut(s) | 89, 1679, 2756, 2757, 3413 |
| AsuHPI | GGTGA | 8 cut(s) | 142, 730, 872, 1406, 1656, 2275, 2564, 3298 |
| AvaI | CYCGRG | 1 cut(s) | 2755 |
| AvaII | GGWCC | 3 cut(s) | 2132, 3060, 3289 |
| BaeGI | GKGCMC | 1 cut(s) | 957 |
| BanI | GGYRCC | 1 cut(s) | 2533 |
| BanII | GRGCYC | 3 cut(s) | 219, 2415, 3546 |
| BauI | CACGAG | 1 cut(s) | 113 |
| BbsI | GAAGAC | 1 cut(s) | 2867 |
| Bbv12I | GWGCWC | 8 cut(s) | 159, 219, 666, 957, 2415, 3151, 3525, 3546 |
| BbvI | GCAGC | 3 cut(s) | 534, 2778, 3545 |
| BceAI | ACGGC | 2 cut(s) | 179, 2779 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 41, 75, 1972, 2006, 3537, 3571 |
| BciT130I | CCWGG | 3 cut(s) | 311, 833, 3179 |
| BciVI | GTATCC | 2 cut(s) | 867, 3321 |
| BclI | TGATCA | 1 cut(s) | 3615 |
| BcnI | CCSGG | 5 cut(s) | 89, 1679, 2756, 2757, 3413 |
| BfaI | CTAG | 4 cut(s) | 1127, 1151, 1506, 2498 |
| BfmI | CTRYAG | 3 cut(s) | 582, 591, 1920 |
| BfrI | CTTAAG | 1 cut(s) | 2576 |
| BfuAI | ACCTGC | 1 cut(s) | 2407 |
| BfuI | GTATCC | 2 cut(s) | 867, 3321 |
| BglII | AGATCT | 1 cut(s) | 2164 |
| BisI | GCNGC | 4 cut(s) | 548, 2792, 2849, 3559 |
| BlsI | GCNGC | 4 cut(s) | 549, 2793, 2850, 3560 |
| BmcAI | AGTACT | 1 cut(s) | 2232 |
| Bme1390I | CCNGG | 8 cut(s) | 89, 311, 833, 1679, 2756, 2757, 3179, 3413 |
| Bme18I | GGWCC | 3 cut(s) | 2132, 3060, 3289 |
| BmeT110I | CYCGRG | 1 cut(s) | 2755 |
| BmgBI | CACGTC | 1 cut(s) | 2949 |
| BmgT120I | GGNCC | 4 cut(s) | 2132, 3004, 3060, 3289 |
| BmiI | GGNNCC | 2 cut(s) | 2293, 2535 |
| BmrFI | CCNGG | 8 cut(s) | 89, 311, 833, 1679, 2756, 2757, 3179, 3413 |
| BmrI | ACTGGG | 3 cut(s) | 309, 874, 2061 |
| BmuI | ACTGGG | 3 cut(s) | 309, 874, 2061 |
| BpiI | GAAGAC | 1 cut(s) | 2867 |
| BpmI | CTGGAG | 2 cut(s) | 49, 3443 |
| BpuEI | CTTGAG | 2 cut(s) | 615, 3539 |
| BpuMI | CCSGG | 5 cut(s) | 89, 1679, 2756, 2757, 3413 |
| Bsa29I | ATCGAT | 1 cut(s) | 3105 |
| BsaAI | YACGTR | 3 cut(s) | 891, 1091, 2419 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1185 |
| BsaI | GGTCTC | 2 cut(s) | 1139, 2765 |
| BsaJI | CCNNGG | 6 cut(s) | 240, 309, 424, 1678, 2755, 3177 |
| BsaWI | WCCGGW | 1 cut(s) | 29 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 922, 952, 3432, 3462 |
| Bse118I | RCCGGY | 2 cut(s) | 1987, 3595 |
| Bse1I | ACTGG | 8 cut(s) | 304, 869, 1182, 2056, 2265, 2295, 2384, 2691 |
| Bse3DI | GCAATG | 3 cut(s) | 1386, 2765, 2965 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1185 |
| BseBI | CCWGG | 3 cut(s) | 311, 833, 3179 |
| BseCI | ATCGAT | 1 cut(s) | 3105 |
| BseDI | CCNNGG | 6 cut(s) | 240, 309, 424, 1678, 2755, 3177 |
| BseJI | GATNNNNATC | 1 cut(s) | 1185 |
| BseMI | GCAATG | 3 cut(s) | 1386, 2765, 2965 |
| BseMII | CTCAG | 7 cut(s) | 738, 780, 984, 2063, 2623, 2985, 3047 |
| BseNI | ACTGG | 8 cut(s) | 304, 869, 1182, 2056, 2265, 2295, 2384, 2691 |
| BseRI | GAGGAG | 3 cut(s) | 185, 450, 1010 |
| BseSI | GKGCMC | 1 cut(s) | 957 |
| BseXI | GCAGC | 3 cut(s) | 534, 2778, 3545 |
| BsgI | GTGCAG | 1 cut(s) | 1035 |
| Bsh1236I | CGCG | 1 cut(s) | 1423 |
| BshFI | GGCC | 1 cut(s) | 3005 |
| BshNI | GGYRCC | 1 cut(s) | 2533 |
| BshVI | ATCGAT | 1 cut(s) | 3105 |
| BsiHKAI | GWGCWC | 8 cut(s) | 159, 219, 666, 957, 2415, 3151, 3525, 3546 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2755 |
| BsiSI | CCGG | 8 cut(s) | 30, 88, 1678, 1988, 2756, 3287, 3412, 3596 |
| BslFI | GGGAC | 5 cut(s) | 316, 572, 2842, 2848, 3528 |
| BsmBI | CGTCTC | 2 cut(s) | 2780, 3419 |
| BsmFI | GGGAC | 5 cut(s) | 316, 572, 2842, 2848, 3528 |
| BsmI | GAATGC | 3 cut(s) | 682, 3300, 3672 |
| BsnI | GGCC | 1 cut(s) | 3005 |
| Bso31I | GGTCTC | 2 cut(s) | 1139, 2765 |
| BsoBI | CYCGRG | 1 cut(s) | 2755 |
| Bsp1286I | GDGCHC | 8 cut(s) | 159, 219, 666, 957, 2415, 3151, 3525, 3546 |
| Bsp68I | TCGCGA | 1 cut(s) | 1423 |
| BspACI | CCGC | 4 cut(s) | 2849, 2937, 3309, 3453 |
| BspANI | GGCC | 1 cut(s) | 3005 |
| BspCNI | CTCAG | 7 cut(s) | 739, 779, 985, 2064, 2622, 2986, 3048 |
| BspDI | ATCGAT | 1 cut(s) | 3105 |
| BspFNI | CGCG | 1 cut(s) | 1423 |
| BspLI | GGNNCC | 2 cut(s) | 2293, 2535 |
| BspMI | ACCTGC | 1 cut(s) | 2407 |
| BspPI | GGATC | 5 cut(s) | 876, 1203, 1458, 1536, 3039 |
| BspT107I | GGYRCC | 1 cut(s) | 2533 |
| BspTI | CTTAAG | 1 cut(s) | 2576 |
| BspTNI | GGTCTC | 2 cut(s) | 1139, 2765 |
| BsrDI | GCAATG | 3 cut(s) | 1386, 2765, 2965 |
| BsrFI | RCCGGY | 2 cut(s) | 1987, 3595 |
| BsrI | ACTGG | 8 cut(s) | 304, 869, 1182, 2056, 2265, 2295, 2384, 2691 |
| BssAI | RCCGGY | 2 cut(s) | 1987, 3595 |
| BssECI | CCNNGG | 6 cut(s) | 240, 309, 424, 1678, 2755, 3177 |
| BssSI | CACGAG | 1 cut(s) | 113 |
| Bst2BI | CACGAG | 1 cut(s) | 113 |
| Bst2UI | CCWGG | 3 cut(s) | 311, 833, 3179 |
| Bst4CI | ACNGT | 6 cut(s) | 702, 1103, 1416, 2666, 2841, 3194 |
| Bst6I | CTCTTC | 3 cut(s) | 1380, 3465, 3540 |
| BstAFI | CTTAAG | 1 cut(s) | 2576 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2857, 3678 |
| BstBAI | YACGTR | 3 cut(s) | 891, 1091, 2419 |
| BstC8I | GCNNGC | 5 cut(s) | 1641, 1719, 2517, 2937, 3597 |
| BstEII | GGTNACC | 1 cut(s) | 1842 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 508 |
| BstFNI | CGCG | 1 cut(s) | 1423 |
| BstHHI | GCGC | 1 cut(s) | 1809 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 11, 68, 214, 2797, 2806, 2857, 2941, 3678 |
| BstNI | CCWGG | 3 cut(s) | 311, 833, 3179 |
| BstNSI | RCATGY | 2 cut(s) | 1028, 1635 |
| BstPI | GGTNACC | 1 cut(s) | 1842 |
| BstSCI | CCNGG | 8 cut(s) | 87, 309, 831, 1677, 2754, 2755, 3177, 3411 |
| BstSFI | CTRYAG | 3 cut(s) | 582, 591, 1920 |
| BstSLI | GKGCMC | 1 cut(s) | 957 |
| BstSNI | TACGTA | 1 cut(s) | 2419 |
| BstUI | CGCG | 1 cut(s) | 1423 |
| BstV1I | GCAGC | 3 cut(s) | 534, 2778, 3545 |
| BstV2I | GAAGAC | 1 cut(s) | 2867 |
| BstX2I | RGATCY | 3 cut(s) | 1195, 2164, 3031 |
| BstYI | RGATCY | 3 cut(s) | 1195, 2164, 3031 |
| Bsu15I | ATCGAT | 1 cut(s) | 3105 |
| BsuI | GTATCC | 2 cut(s) | 867, 3321 |
| BsuRI | GGCC | 1 cut(s) | 3005 |
| BsuTUI | ATCGAT | 1 cut(s) | 3105 |
| BtgZI | GCGATG | 1 cut(s) | 1997 |
| BtrI | CACGTC | 1 cut(s) | 2949 |
| BtsI | GCAGTG | 2 cut(s) | 159, 1047 |
| BtsIMutI | CAGTG | 5 cut(s) | 159, 744, 1047, 2846, 3635 |
| BtuMI | TCGCGA | 1 cut(s) | 1423 |
| BveI | ACCTGC | 1 cut(s) | 2407 |
| Cac8I | GCNNGC | 5 cut(s) | 1641, 1719, 2517, 2937, 3597 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3121, 3192 |
| CfoI | GCGC | 1 cut(s) | 1809 |
| Cfr10I | RCCGGY | 2 cut(s) | 1987, 3595 |
| Cfr13I | GGNCC | 4 cut(s) | 2132, 3004, 3060, 3289 |
| Cfr9I | CCCGGG | 1 cut(s) | 2755 |
| ClaI | ATCGAT | 1 cut(s) | 3105 |
| CpoI | CGGWCCG | 1 cut(s) | 3289 |
| CseI | GACGC | 3 cut(s) | 1937, 2336, 2797 |
| Csp6I | GTAC | 4 cut(s) | 501, 703, 1860, 2231 |
| CspI | CGGWCCG | 1 cut(s) | 3289 |
| CviQI | GTAC | 4 cut(s) | 501, 703, 1860, 2231 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2278, 2794 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2278, 2794 |
| Eam1104I | CTCTTC | 3 cut(s) | 1380, 3465, 3540 |
| EarI | CTCTTC | 3 cut(s) | 1380, 3465, 3540 |
| Ecl136II | GAGCTC | 3 cut(s) | 217, 2413, 3544 |
| Eco105I | TACGTA | 1 cut(s) | 2419 |
| Eco24I | GRGCYC | 3 cut(s) | 219, 2415, 3546 |
| Eco31I | GGTCTC | 2 cut(s) | 1139, 2765 |
| Eco32I | GATATC | 4 cut(s) | 421, 3103, 3184, 3475 |
| Eco47I | GGWCC | 3 cut(s) | 2132, 3060, 3289 |
| Eco53kI | GAGCTC | 3 cut(s) | 217, 2413, 3544 |
| Eco57I | CTGAAG | 5 cut(s) | 146, 2171, 2786, 3005, 3659 |
| Eco88I | CYCGRG | 1 cut(s) | 2755 |
| Eco91I | GGTNACC | 1 cut(s) | 1842 |
| EcoICRI | GAGCTC | 3 cut(s) | 217, 2413, 3544 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 508 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3060 |
| EcoO65I | GGTNACC | 1 cut(s) | 1842 |
| EcoRI | GAATTC | 4 cut(s) | 775, 2456, 2981, 3572 |
| EcoRII | CCWGG | 3 cut(s) | 309, 831, 3177 |
| EcoRV | GATATC | 4 cut(s) | 421, 3103, 3184, 3475 |
| EcoT22I | ATGCAT | 2 cut(s) | 1030, 1473 |
| EcoT38I | GRGCYC | 3 cut(s) | 219, 2415, 3546 |
| Esp3I | CGTCTC | 2 cut(s) | 2780, 3419 |
| FaqI | GGGAC | 5 cut(s) | 316, 572, 2842, 2848, 3528 |
| FauI | CCCGC | 2 cut(s) | 2944, 3460 |
| FbaI | TGATCA | 1 cut(s) | 3615 |
| Fnu4HI | GCNGC | 4 cut(s) | 548, 2792, 2849, 3559 |
| FriOI | GRGCYC | 3 cut(s) | 219, 2415, 3546 |
| Fsp4HI | GCNGC | 4 cut(s) | 548, 2792, 2849, 3559 |
| FspBI | CTAG | 4 cut(s) | 1127, 1151, 1506, 2498 |
| GlaI | GCGC | 1 cut(s) | 1808 |
| GluI | GCNGC | 4 cut(s) | 548, 2792, 2849, 3559 |
| GsuI | CTGGAG | 2 cut(s) | 49, 3443 |
| HaeIII | GGCC | 1 cut(s) | 3005 |
| HapII | CCGG | 8 cut(s) | 30, 88, 1678, 1988, 2756, 3287, 3412, 3596 |
| HgaI | GACGC | 3 cut(s) | 1937, 2336, 2797 |
| HhaI | GCGC | 1 cut(s) | 1809 |
| Hin6I | GCGC | 1 cut(s) | 1807 |
| HinP1I | GCGC | 1 cut(s) | 1807 |
| HincII | GTYRAC | 1 cut(s) | 187 |
| HindII | GTYRAC | 1 cut(s) | 187 |
| HindIII | AAGCTT | 1 cut(s) | 270 |
| HpaII | CCGG | 8 cut(s) | 30, 88, 1678, 1988, 2756, 3287, 3412, 3596 |
| HphI | GGTGA | 8 cut(s) | 142, 730, 872, 1406, 1656, 2275, 2564, 3298 |
| Hpy166II | GTNNAC | 8 cut(s) | 118, 187, 935, 955, 1733, 1793, 1860, 2003 |
| Hpy8I | GTNNAC | 8 cut(s) | 118, 187, 935, 955, 1733, 1793, 1860, 2003 |
| Hpy99I | CGWCG | 4 cut(s) | 200, 2210, 2785, 2800 |
| HpyCH4III | ACNGT | 6 cut(s) | 702, 1103, 1416, 2666, 2841, 3194 |
| HpyCH4IV | ACGT | 8 cut(s) | 134, 890, 937, 1090, 2418, 2948, 3319, 3428 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 11, 68, 214, 2797, 2806, 2857, 2941, 3678 |
| HpySE526I | ACGT | 8 cut(s) | 134, 890, 937, 1090, 2418, 2948, 3319, 3428 |
| HspAI | GCGC | 1 cut(s) | 1807 |
| KroI | GCCGGC | 1 cut(s) | 3595 |
| KroNI | GCCGGC | 1 cut(s) | 3597 |
| Ksp22I | TGATCA | 1 cut(s) | 3615 |
| LmnI | GCTCC | 3 cut(s) | 2814, 3146, 3549 |
| Lsp1109I | GCAGC | 3 cut(s) | 534, 2778, 3545 |
| MaeI | CTAG | 4 cut(s) | 1127, 1151, 1506, 2498 |
| MaeII | ACGT | 8 cut(s) | 134, 890, 937, 1090, 2418, 2948, 3319, 3428 |
| MfeI | CAATTG | 1 cut(s) | 3008 |
| MflI | RGATCY | 3 cut(s) | 1195, 2164, 3031 |
| MhlI | GDGCHC | 8 cut(s) | 159, 219, 666, 957, 2415, 3151, 3525, 3546 |
| MlyI | GAGTC | 4 cut(s) | 2312, 2881, 3264, 3574 |
| MmeI | TCCRAC | 8 cut(s) | 375, 577, 592, 1277, 1506, 2229, 2355, 2685 |
| Mph1103I | ATGCAT | 2 cut(s) | 1030, 1473 |
| MroNI | GCCGGC | 1 cut(s) | 3595 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2101, 2241 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1093, 1209, 1726 |
| MspCI | CTTAAG | 1 cut(s) | 2576 |
| MspI | CCGG | 8 cut(s) | 30, 88, 1678, 1988, 2756, 3287, 3412, 3596 |
| MspR9I | CCNGG | 8 cut(s) | 89, 311, 833, 1679, 2756, 2757, 3179, 3413 |
| MunI | CAATTG | 1 cut(s) | 3008 |
| Mva1269I | GAATGC | 3 cut(s) | 682, 3300, 3672 |
| MvaI | CCWGG | 3 cut(s) | 311, 833, 3179 |
| MvnI | CGCG | 1 cut(s) | 1423 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 11, 68, 214, 2797, 2806, 2857, 2941, 3678 |
| NaeI | GCCGGC | 1 cut(s) | 3597 |
| NciI | CCSGG | 5 cut(s) | 89, 1679, 2756, 2757, 3413 |
| NgoMIV | GCCGGC | 1 cut(s) | 3595 |
| NlaIV | GGNNCC | 2 cut(s) | 2293, 2535 |
| NmeAIII | GCCGAG | 1 cut(s) | 265 |
| NmuCI | GTSAC | 3 cut(s) | 130, 860, 2949 |
| NruI | TCGCGA | 1 cut(s) | 1423 |
| NsiI | ATGCAT | 2 cut(s) | 1030, 1473 |
| NspI | RCATGY | 2 cut(s) | 1028, 1635 |
| PciI | ACATGT | 1 cut(s) | 1631 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 896, 3264 |
| PctI | GAATGC | 3 cut(s) | 682, 3300, 3672 |
| PdiI | GCCGGC | 1 cut(s) | 3597 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2101, 2241 |
| PflFI | GACNNNGTC | 1 cut(s) | 3698 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1622, 2387 |
| PfoI | TCCNGGA | 1 cut(s) | 831 |
| PkrI | GCNGC | 4 cut(s) | 549, 2793, 2850, 3560 |
| PleI | GAGTC | 4 cut(s) | 2312, 2881, 3263, 3573 |
| PpsI | GAGTC | 4 cut(s) | 2312, 2881, 3263, 3573 |
| Ppu21I | YACGTR | 3 cut(s) | 891, 1091, 2419 |
| PpuMI | RGGWCCY | 1 cut(s) | 3060 |
| PscI | ACATGT | 1 cut(s) | 1631 |
| PshBI | ATTAAT | 1 cut(s) | 2817 |
| PsiI | TTATAA | 2 cut(s) | 354, 1869 |
| Psp124BI | GAGCTC | 3 cut(s) | 219, 2415, 3546 |
| Psp5II | RGGWCCY | 1 cut(s) | 3060 |
| Psp6I | CCWGG | 3 cut(s) | 309, 831, 3177 |
| PspEI | GGTNACC | 1 cut(s) | 1842 |
| PspGI | CCWGG | 3 cut(s) | 309, 831, 3177 |
| PspN4I | GGNNCC | 2 cut(s) | 2293, 2535 |
| PspPI | GGNCC | 4 cut(s) | 2132, 3004, 3060, 3289 |
| PspPPI | RGGWCCY | 1 cut(s) | 3060 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2356, 2388 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3121, 3192 |
| PsuI | RGATCY | 3 cut(s) | 1195, 2164, 3031 |
| PsyI | GACNNNGTC | 1 cut(s) | 3698 |
| RruI | TCGCGA | 1 cut(s) | 1423 |
| RsaI | GTAC | 4 cut(s) | 502, 704, 1861, 2232 |
| RsaNI | GTAC | 4 cut(s) | 501, 703, 1860, 2231 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1093, 1209, 1726 |
| Rsr2I | CGGWCCG | 1 cut(s) | 3289 |
| RsrII | CGGWCCG | 1 cut(s) | 3289 |
| SacI | GAGCTC | 3 cut(s) | 219, 2415, 3546 |
| SatI | GCNGC | 4 cut(s) | 548, 2792, 2849, 3559 |
| Sau96I | GGNCC | 4 cut(s) | 2132, 3004, 3060, 3289 |
| ScaI | AGTACT | 1 cut(s) | 2232 |
| SchI | GAGTC | 4 cut(s) | 2312, 2881, 3264, 3574 |
| ScrFI | CCNGG | 8 cut(s) | 89, 311, 833, 1679, 2756, 2757, 3179, 3413 |
| SduI | GDGCHC | 8 cut(s) | 159, 219, 666, 957, 2415, 3151, 3525, 3546 |
| SfcI | CTRYAG | 3 cut(s) | 582, 591, 1920 |
| SinI | GGWCC | 3 cut(s) | 2132, 3060, 3289 |
| SmaI | CCCGGG | 1 cut(s) | 2757 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1093, 1209, 1726 |
| SmlI | CTYRAG | 3 cut(s) | 630, 2576, 3518 |
| SmoI | CTYRAG | 3 cut(s) | 630, 2576, 3518 |
| SnaBI | TACGTA | 1 cut(s) | 2419 |
| SsiI | CCGC | 4 cut(s) | 2849, 2937, 3309, 3453 |
| SspI | AATATT | 1 cut(s) | 3653 |
| SspMI | CTAG | 4 cut(s) | 1127, 1151, 1506, 2498 |
| SstI | GAGCTC | 3 cut(s) | 219, 2415, 3546 |
| StyD4I | CCNGG | 8 cut(s) | 87, 309, 831, 1677, 2754, 2755, 3177, 3411 |
| TaaI | ACNGT | 6 cut(s) | 702, 1103, 1416, 2666, 2841, 3194 |
| TaiI | ACGT | 8 cut(s) | 137, 893, 940, 1093, 2421, 2951, 3322, 3431 |
| TaqI | TCGA | 9 cut(s) | 198, 234, 790, 2092, 3099, 3105, 3471, 3488, 3570 |
| TaqII | GACCGA | 3 cut(s) | 416, 2120, 3306 |
| TatI | WGTACW | 2 cut(s) | 1859, 2230 |
| TauI | GCSGC | 1 cut(s) | 2851 |
| TscAI | CASTG | 5 cut(s) | 159, 751, 1054, 2846, 3642 |
| TseFI | GTSAC | 3 cut(s) | 130, 860, 2949 |
| TseI | GCWGC | 3 cut(s) | 547, 2791, 3558 |
| Tsp45I | GTSAC | 3 cut(s) | 130, 860, 2949 |
| TspGWI | ACGGA | 4 cut(s) | 2203, 2798, 2945, 3234 |
| TspMI | CCCGGG | 1 cut(s) | 2755 |
| TspRI | CASTG | 5 cut(s) | 159, 751, 1054, 2846, 3642 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3698 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1622, 2387 |
| Vha464I | CTTAAG | 1 cut(s) | 2576 |
| VneI | GTGCAC | 1 cut(s) | 953 |
| VpaK11BI | GGWCC | 3 cut(s) | 2132, 3060, 3289 |
| VspI | ATTAAT | 1 cut(s) | 2817 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 508 |
| XbaI | TCTAGA | 1 cut(s) | 1505 |
| XceI | RCATGY | 2 cut(s) | 1028, 1635 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 73 |
| XmaI | CCCGGG | 1 cut(s) | 2755 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2101, 2241 |
| XspI | CTAG | 4 cut(s) | 1127, 1151, 1506, 2498 |
| ZrmI | AGTACT | 1 cut(s) | 2232 |
| Zsp2I | ATGCAT | 2 cut(s) | 1030, 1473 |