Rmu_sc0001212.1_g000017

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001212.1
Physical Location & Seq
Reverse (-)
80669 .. 82963
2295 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001212.1_g000017.1.cds

Sequence Viewer

Length: 2295 bp
atggataaaggtgtcgcagactggatgggtacccttgaaagtcaacatctaatgccactatctgaggaaaactgctggttgctgttctcaaaacatgccttcaagaaggcaggtgttactgcagatctgtcgcttgaaaagattggaaaacagattgctaaaaagtgtaaaggactccctttagctgcaaaatcacttgggggtcttttacgttctgaaccaaatattgagaaatgggaagaaatattgaacaatgacatatgggagttacgagatgaagagaacgacattttacccgctctatggttgagctaccattatctacctccacatctgaagcgttgttttgcttactgttccatatttcctcaagattatgagttttacaaatcaaagctggttttgttgtggatggctgaagatctcttaccactgagatcgaagactacaattgaagaagtcggagagaactactttgatgatctagtgtcaaggtcattttttcaacatgtacctaatcacttttctggtgaggcagttttcacaatgcatgaccttatccatgacttagcaaactttgtctccggagagttttgtgttaggttggaggacaatgactcagtacttgagaatgtcagcaagagtcgccacttttcgtgtatgaatgcatctgccgtaattgatgaatgggacagtttgtatgaagctaagtatctgcgaacctttctagtattaaaatctggtagacttcccaacttagattttgatatattattcctgaagcttcagtgtttaagagtgctcgatatatcaaggtaccatatccgtgagctacctggttcaattagcatgttgaagcatctaaggcacttggacttgtcttactcattaattaagaagttacctgatgaaatgtgtactttatataatttacagacgttgttgttgttgggttgtgaatctctagttgagttgccaactgatttgggaagattaatcaacttgcgtcatcttgatattgaaggcacaaagatagaaaagatgccaccaaggatgggcaaaatgaaagatctccaaacattaagaggtaagtttgtcctagacaaatacactggtgataacattgtggagattaaagagcttcagcagttgcgcggaactctttgtatctcggggcttcgtaatagtgtgcatgtcacagatgccattatgagaaagaagaagcatgtggatgaattagttttggaatggggaggcgagtctggtgacaccgacgatacacaaaaagagagagatgtgctggagaacctccaacctcatacaaatctaaaagaactcacgattcaatcttatgggggcacaagatttccaggttggttggaagatctttctagtttatctaatctggttcgtattcgacttctggattgccgaaattgtttgtcgttgccatcagctgagcagctaccgtccctccaagagcttgagattcaaggatttaatggagtggtgactgtgggttctaagcattttcctaatcttcgtaagcttggtctgaaatcttgtcccggggtaaccggggcattcatgctagcctgcttcccaaagcttgaaagcctcgatttggaggatgtgaatgtagaatctcttaattccccttcactcctctcccttgtccgccttaaaatatcttcatgcccaaattttgtttgttttcccgatggagggctggatgcgcccaacttggagaccatagaagtccaagtatgtccgaaactgaggtcaatgccacaacacatgcacaaccttcgcccatctcttaggctgttgttcgtagatgattgtccagaattggaatcatttcccgaagggggattgccgtctaagttggaacacttgcgcatccggcgttgcaagaaactcctcattggaaaccgtatgcagtggggtctaccaacactcacctctctcaaattcttgagagtcgactttgagggatgtgaacaagttgtagattcatttccagacgaggggctgctgcccaccactctcggatcactctacatcaactgtatttcgaagctggacggcaaggggtttacacagctcacctctcttaaccagttggtaatttgcaattgccctgaacttcggtgcttgccagatgaagggctacccacttctctttctgagctgtggatatttaattgtcctttgctaaaacaacgttgccagagagagacaggggaagattggcccaagattgctcacatcaaagggcatttctatcaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

764

Amino Acids

87.01

Weight (kDa)

5.82

Isoelectric Point (pI)

51.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 101
Acc16I TGCGCA 1 cut(s) 1901
Acc36I ACCTGC 1 cut(s) 101
Acc65I GGTACC 2 cut(s) 29, 816
AccB1I GGYRCC 2 cut(s) 29, 816
AccBSI CCGCTC 1 cut(s) 299
AccI GTMKAC 3 cut(s) 745, 1951, 1986
AccII CGCG 1 cut(s) 1155
AccIII TCCGGA 1 cut(s) 584
AciI CCGC 3 cut(s) 297, 1155, 1678
AclI AACGTT 1 cut(s) 2227
AclWI GGATC 1 cut(s) 2062
AcsI RAATTY 2 cut(s) 1702, 1973
AcuI CTGAAG 5 cut(s) 356, 438, 770, 800, 1127
AfaI GTAC 5 cut(s) 31, 513, 624, 818, 919
AfiI CCNNNNNNNGG 8 cut(s) 303, 1055, 1624, 1724, 1725, 1871, 2030, 2168
AflIII ACRYGT 1 cut(s) 508
AjnI CCWGG 2 cut(s) 835, 1369
Alw21I GWGCWC 1 cut(s) 804
Alw26I GTCTC 3 cut(s) 586, 1742, 2234
AlwI GGATC 1 cut(s) 2062
Ama87I CYCGRG 2 cut(s) 1171, 1568
Aor13HI TCCGGA 1 cut(s) 584
AoxI GGCC 1 cut(s) 2255
ApeKI GCWGC 4 cut(s) 185, 1462, 2035, 2038
ApoI RAATTY 2 cut(s) 1702, 1973
ArsI GACNNNNNNTTYG 2 cut(s) 1766, 1798
AseI ATTAAT 2 cut(s) 890, 995
Asp700I GAANNNNTTC 1 cut(s) 1860
Asp718I GGTACC 2 cut(s) 29, 816
AspLEI GCGC 3 cut(s) 1155, 1738, 1902
AspS9I GGNCC 1 cut(s) 2256
AsuC2I CCSGG 3 cut(s) 1569, 1570, 1579
AsuHPI GGTGA 6 cut(s) 542, 1127, 1277, 1522, 1954, 2101
AsuII TTCGAA 1 cut(s) 2078
AsuNHI GCTAGC 1 cut(s) 1591
AvaI CYCGRG 2 cut(s) 1171, 1568
BaeGI GKGCMC 1 cut(s) 1361
BanI GGYRCC 2 cut(s) 29, 816
BarI GAAGNNNNNNTAC 2 cut(s) 411, 443
BbsI GAAGAC 1 cut(s) 449
Bbv12I GWGCWC 1 cut(s) 804
BbvI GCAGC 4 cut(s) 172, 1474, 2022, 2025
BccI CCATC 6 cut(s) 19, 406, 1048, 1459, 1715, 1822
BceAI ACGGC 3 cut(s) 659, 1864, 2104
BcgI CGANNNNNNTGC 4 cut(s) 111, 145, 1790, 1824
BciT130I CCWGG 2 cut(s) 837, 1371
BcnI CCSGG 3 cut(s) 1569, 1570, 1579
BcoDI GTCTC 3 cut(s) 586, 1742, 2234
BfaI CTAG 6 cut(s) 485, 728, 965, 1100, 1392, 1592
BfmI CTRYAG 1 cut(s) 120
BfuAI ACCTGC 1 cut(s) 101
BglII AGATCT 4 cut(s) 124, 421, 1069, 1384
BisI GCNGC 4 cut(s) 186, 1463, 2036, 2039
BlpI GCTNAGC 1 cut(s) 1458
BlsI GCNGC 4 cut(s) 187, 1464, 2037, 2040
BmcAI AGTACT 1 cut(s) 624
Bme1390I CCNGG 5 cut(s) 837, 1371, 1569, 1570, 1579
BmeT110I CYCGRG 2 cut(s) 1171, 1568
BmgT120I GGNCC 1 cut(s) 2256
BmiI GGNNCC 2 cut(s) 31, 818
BmrFI CCNGG 5 cut(s) 837, 1371, 1569, 1570, 1579
BmsI GCATC 6 cut(s) 677, 868, 1032, 1192, 1723, 1911
BmtI GCTAGC 1 cut(s) 1595
BpiI GAAGAC 1 cut(s) 449
BpmI CTGGAG 1 cut(s) 1322
Bpu1102I GCTNAGC 1 cut(s) 1458
Bpu14I TTCGAA 1 cut(s) 2078
BpuEI CTTGAG 4 cut(s) 354, 647, 1505, 1999
BpuMI CCSGG 3 cut(s) 1569, 1570, 1579
BsaI GGTCTC 1 cut(s) 1742
BsaJI CCNNGG 4 cut(s) 1049, 1568, 1569, 1578
BsaWI WCCGGW 1 cut(s) 584
BsaXI ACNNNNNCTCC 4 cut(s) 566, 596, 1458, 1488
Bsc4I CCNNNNNNNGG 8 cut(s) 303, 1055, 1624, 1724, 1725, 1871, 2030, 2168
Bse1I ACTGG 3 cut(s) 26, 1117, 2122
BseAI TCCGGA 1 cut(s) 584
BseBI CCWGG 2 cut(s) 837, 1371
BseDI CCNNGG 4 cut(s) 1049, 1568, 1569, 1578
BseGI GGATG 8 cut(s) 30, 417, 1059, 1237, 1636, 1738, 1902, 2003
BseLI CCNNNNNNNGG 8 cut(s) 303, 1055, 1624, 1724, 1725, 1871, 2030, 2168
BseMII CTCAG 6 cut(s) 54, 425, 633, 1449, 1769, 2181
BseNI ACTGG 3 cut(s) 26, 1117, 2122
BseRI GAGGAG 2 cut(s) 1655, 1913
BseSI GKGCMC 1 cut(s) 1361
BseXI GCAGC 4 cut(s) 172, 1474, 2022, 2025
Bsh1236I CGCG 1 cut(s) 1155
BshFI GGCC 1 cut(s) 2257
BshNI GGYRCC 2 cut(s) 29, 816
BsiHKAI GWGCWC 1 cut(s) 804
BsiHKCI CYCGRG 2 cut(s) 1171, 1568
BsiSI CCGG 4 cut(s) 585, 1569, 1578, 1906
BslFI GGGAC 3 cut(s) 704, 1456, 1551
BslI CCNNNNNNNGG 8 cut(s) 303, 1055, 1624, 1724, 1725, 1871, 2030, 2168
BsmAI GTCTC 3 cut(s) 586, 1742, 2234
BsmFI GGGAC 3 cut(s) 704, 1456, 1551
BsmI GAATGC 2 cut(s) 670, 1583
BsnI GGCC 1 cut(s) 2257
Bso31I GGTCTC 1 cut(s) 1742
BsoBI CYCGRG 2 cut(s) 1171, 1568
Bsp119I TTCGAA 1 cut(s) 2078
Bsp1286I GDGCHC 2 cut(s) 804, 1361
Bsp13I TCCGGA 1 cut(s) 584
Bsp143I GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
Bsp1720I GCTNAGC 1 cut(s) 1458
BspACI CCGC 3 cut(s) 297, 1155, 1678
BspANI GGCC 1 cut(s) 2257
BspCNI CTCAG 6 cut(s) 55, 426, 632, 1450, 1770, 2182
BspEI TCCGGA 1 cut(s) 584
BspFNI CGCG 1 cut(s) 1155
BspLI GGNNCC 2 cut(s) 31, 818
BspMAI CTGCAG 1 cut(s) 124
BspMI ACCTGC 1 cut(s) 101
BspOI GCTAGC 1 cut(s) 1595
BspPI GGATC 1 cut(s) 2062
BspT104I TTCGAA 1 cut(s) 2078
BspT107I GGYRCC 2 cut(s) 29, 816
BspTNI GGTCTC 1 cut(s) 1742
BsrBI CCGCTC 1 cut(s) 299
BsrI ACTGG 3 cut(s) 26, 1117, 2122
BssECI CCNNGG 4 cut(s) 1049, 1568, 1569, 1578
BssMI GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
BssT1I CCWWGG 1 cut(s) 1049
Bst2UI CCWGG 2 cut(s) 837, 1371
Bst4CI ACNGT 6 cut(s) 356, 695, 1470, 1516, 1937, 2072
Bst6I CTCTTC 1 cut(s) 273
BstBI TTCGAA 1 cut(s) 2078
BstC8I GCNNGC 3 cut(s) 1593, 1597, 2159
BstEII GGTNACC 1 cut(s) 1573
BstF5I GGATG 8 cut(s) 30, 417, 1059, 1237, 1636, 1738, 1902, 2003
BstFNI CGCG 1 cut(s) 1155
BstHHI GCGC 3 cut(s) 1155, 1738, 1902
BstKTI GATC 7 cut(s) 127, 424, 440, 484, 1072, 1387, 2057
BstMAI GTCTC 3 cut(s) 586, 1742, 2234
BstMBI GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
BstMWI GCNNNNNNNGC 4 cut(s) 645, 865, 1735, 1906
BstNI CCWGG 2 cut(s) 837, 1371
BstNSI RCATGY 6 cut(s) 98, 512, 853, 1196, 1229, 1801
BstPI GGTNACC 1 cut(s) 1573
BstSCI CCNGG 5 cut(s) 835, 1369, 1567, 1568, 1577
BstSFI CTRYAG 1 cut(s) 120
BstSLI GKGCMC 1 cut(s) 1361
BstUI CGCG 1 cut(s) 1155
BstV1I GCAGC 4 cut(s) 172, 1474, 2022, 2025
BstV2I GAAGAC 1 cut(s) 449
BstX2I RGATCY 4 cut(s) 124, 421, 1069, 1384
BstYI RGATCY 4 cut(s) 124, 421, 1069, 1384
BsuRI GGCC 1 cut(s) 2257
BtsCI GGATG 8 cut(s) 30, 417, 1059, 1237, 1636, 1738, 1902, 2003
BtsI GCAGTG 1 cut(s) 1949
BtsIMutI CAGTG 4 cut(s) 431, 794, 1110, 1949
BveI ACCTGC 1 cut(s) 101
Cac8I GCNNGC 3 cut(s) 1593, 1597, 2159
CfoI GCGC 3 cut(s) 1155, 1738, 1902
Cfr13I GGNCC 1 cut(s) 2256
Cfr9I CCCGGG 1 cut(s) 1568
CseI GACGC 1 cut(s) 995
CsiI ACCWGGT 1 cut(s) 835
Csp6I GTAC 5 cut(s) 30, 512, 623, 817, 918
CviQI GTAC 5 cut(s) 30, 512, 623, 817, 918
DpnI GATC 7 cut(s) 126, 423, 439, 483, 1071, 1386, 2056
DpnII GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
Eam1104I CTCTTC 1 cut(s) 273
EarI CTCTTC 1 cut(s) 273
EciI GGCGGA 1 cut(s) 1667
Eco130I CCWWGG 1 cut(s) 1049
Eco31I GGTCTC 1 cut(s) 1742
Eco57I CTGAAG 5 cut(s) 356, 438, 770, 800, 1127
Eco88I CYCGRG 2 cut(s) 1171, 1568
Eco91I GGTNACC 1 cut(s) 1573
EcoO65I GGTNACC 1 cut(s) 1573
EcoRII CCWGG 2 cut(s) 835, 1369
EcoT14I CCWWGG 1 cut(s) 1049
EcoT22I ATGCAT 2 cut(s) 552, 670
ErhI CCWWGG 1 cut(s) 1049
FaqI GGGAC 3 cut(s) 704, 1456, 1551
FauI CCCGC 1 cut(s) 304
FauNDI CATATG 1 cut(s) 260
FblI GTMKAC 3 cut(s) 745, 1951, 1986
Fnu4HI GCNGC 4 cut(s) 186, 1463, 2036, 2039
FokI GGATG 8 cut(s) 37, 424, 1066, 1244, 1643, 1745, 1889, 2010
Fsp4HI GCNGC 4 cut(s) 186, 1463, 2036, 2039
FspBI CTAG 6 cut(s) 485, 728, 965, 1100, 1392, 1592
FspI TGCGCA 1 cut(s) 1901
GlaI GCGC 3 cut(s) 1154, 1737, 1901
GluI GCNGC 4 cut(s) 186, 1463, 2036, 2039
GsuI CTGGAG 1 cut(s) 1322
HaeIII GGCC 1 cut(s) 2257
HapII CCGG 4 cut(s) 585, 1569, 1578, 1906
HgaI GACGC 1 cut(s) 995
HhaI GCGC 3 cut(s) 1155, 1738, 1902
Hin6I GCGC 3 cut(s) 1153, 1736, 1900
HinP1I GCGC 3 cut(s) 1153, 1736, 1900
HincII GTYRAC 2 cut(s) 44, 1987
HindII GTYRAC 2 cut(s) 44, 1987
HindIII AAGCTT 3 cut(s) 782, 1547, 1607
HpaII CCGG 4 cut(s) 585, 1569, 1578, 1906
HphI GGTGA 6 cut(s) 542, 1127, 1277, 1522, 1954, 2101
Hpy166II GTNNAC 7 cut(s) 44, 746, 918, 1952, 1987, 2003, 2100
Hpy188I TCNGA 8 cut(s) 64, 217, 336, 464, 1557, 1773, 2054, 2191
Hpy8I GTNNAC 7 cut(s) 44, 746, 918, 1952, 1987, 2003, 2100
Hpy99I CGWCG 1 cut(s) 1277
HpyAV CCTTC 7 cut(s) 100, 109, 1016, 1668, 1817, 1862, 2162
HpyCH4III ACNGT 6 cut(s) 356, 695, 1470, 1516, 1937, 2072
HpyCH4IV ACGT 3 cut(s) 211, 938, 2227
HpyCH4V TGCA 9 cut(s) 122, 188, 550, 668, 1192, 1801, 1914, 1942, 2136
HpyF10VI GCNNNNNNNGC 4 cut(s) 645, 865, 1735, 1906
HpySE526I ACGT 3 cut(s) 211, 938, 2227
HspAI GCGC 3 cut(s) 1153, 1736, 1900
Kpn2I TCCGGA 1 cut(s) 584
KpnI GGTACC 2 cut(s) 33, 820
Kzo9I GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
Lsp1109I GCAGC 4 cut(s) 172, 1474, 2022, 2025
LweI GCATC 6 cut(s) 677, 868, 1032, 1192, 1723, 1911
MabI ACCWGGT 1 cut(s) 835
MaeI CTAG 6 cut(s) 485, 728, 965, 1100, 1392, 1592
MaeII ACGT 3 cut(s) 211, 938, 2227
MaeIII GTNAC 7 cut(s) 115, 267, 900, 1195, 1265, 1510, 1573
MalI GATC 7 cut(s) 126, 423, 439, 483, 1071, 1386, 2056
MbiI CCGCTC 1 cut(s) 299
MboI GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
MfeI CAATTG 2 cut(s) 450, 2137
MflI RGATCY 4 cut(s) 124, 421, 1069, 1384
MhlI GDGCHC 2 cut(s) 804, 1361
MlyI GAGTC 5 cut(s) 168, 611, 652, 1268, 1992
MmeI TCCRAC 5 cut(s) 442, 585, 1336, 1359, 1869
Mph1103I ATGCAT 2 cut(s) 552, 670
MroI TCCGGA 1 cut(s) 584
MroXI GAANNNNTTC 1 cut(s) 1860
MslI CAYNNNNRTG 2 cut(s) 825, 1230
MspA1I CMGCKG 1 cut(s) 1457
MspI CCGG 4 cut(s) 585, 1569, 1578, 1906
MspR9I CCNGG 5 cut(s) 837, 1371, 1569, 1570, 1579
MunI CAATTG 2 cut(s) 450, 2137
Mva1269I GAATGC 2 cut(s) 670, 1583
MvaI CCWGG 2 cut(s) 837, 1371
MvnI CGCG 1 cut(s) 1155
MwoI GCNNNNNNNGC 4 cut(s) 645, 865, 1735, 1906
NciI CCSGG 3 cut(s) 1569, 1570, 1579
NdeI CATATG 1 cut(s) 260
NdeII GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
NheI GCTAGC 1 cut(s) 1591
NlaIV GGNNCC 2 cut(s) 31, 818
NmuCI GTSAC 3 cut(s) 1195, 1265, 1510
NsbI TGCGCA 1 cut(s) 1901
NsiI ATGCAT 2 cut(s) 552, 670
NspI RCATGY 6 cut(s) 98, 512, 853, 1196, 1229, 1801
NspV TTCGAA 1 cut(s) 2078
PacI TTAATTAA 1 cut(s) 894
PaqCI CACCTGC 1 cut(s) 101
PciI ACATGT 1 cut(s) 508
PctI GAATGC 2 cut(s) 670, 1583
PdmI GAANNNNTTC 1 cut(s) 1860
PfeI GAWTC 6 cut(s) 959, 1342, 1489, 1643, 1856, 2015
PkrI GCNGC 4 cut(s) 187, 1464, 2037, 2040
PleI GAGTC 5 cut(s) 168, 611, 651, 1267, 1991
PpsI GAGTC 5 cut(s) 168, 611, 651, 1267, 1991
PscI ACATGT 1 cut(s) 508
PshBI ATTAAT 2 cut(s) 890, 995
Psp1406I AACGTT 1 cut(s) 2227
Psp6I CCWGG 2 cut(s) 835, 1369
PspEI GGTNACC 1 cut(s) 1573
PspGI CCWGG 2 cut(s) 835, 1369
PspN4I GGNNCC 2 cut(s) 31, 818
PspPI GGNCC 1 cut(s) 2256
PstI CTGCAG 1 cut(s) 124
PsuI RGATCY 4 cut(s) 124, 421, 1069, 1384
PvuII CAGCTG 1 cut(s) 1457
RsaI GTAC 5 cut(s) 31, 513, 624, 818, 919
RsaNI GTAC 5 cut(s) 30, 512, 623, 817, 918
RseI CAYNNNNRTG 2 cut(s) 825, 1230
SalI GTCGAC 1 cut(s) 1985
SatI GCNGC 4 cut(s) 186, 1463, 2036, 2039
Sau3AI GATC 7 cut(s) 124, 421, 437, 481, 1069, 1384, 2054
Sau96I GGNCC 1 cut(s) 2256
ScaI AGTACT 1 cut(s) 624
SchI GAGTC 5 cut(s) 168, 611, 652, 1268, 1992
ScrFI CCNGG 5 cut(s) 837, 1371, 1569, 1570, 1579
SduI GDGCHC 2 cut(s) 804, 1361
SexAI ACCWGGT 1 cut(s) 835
SfaNI GCATC 6 cut(s) 677, 868, 1032, 1192, 1723, 1911
SfcI CTRYAG 1 cut(s) 120
SfuI TTCGAA 1 cut(s) 2078
SmaI CCCGGG 1 cut(s) 1570
SmiMI CAYNNNNRTG 2 cut(s) 825, 1230
SmlI CTYRAG 4 cut(s) 369, 626, 1484, 1978
SmoI CTYRAG 4 cut(s) 369, 626, 1484, 1978
SsiI CCGC 3 cut(s) 297, 1155, 1678
SspI AATATT 2 cut(s) 226, 246
SspMI CTAG 6 cut(s) 485, 728, 965, 1100, 1392, 1592
StyD4I CCNGG 5 cut(s) 835, 1369, 1567, 1568, 1577
StyI CCWWGG 1 cut(s) 1049
TaaI ACNGT 6 cut(s) 356, 695, 1470, 1516, 1937, 2072
TaiI ACGT 3 cut(s) 214, 941, 2230
TaqI TCGA 6 cut(s) 440, 804, 1417, 1620, 1986, 2078
TatI WGTACW 2 cut(s) 622, 917
TfiI GAWTC 6 cut(s) 959, 1342, 1489, 1643, 1856, 2015
TscAI CASTG 4 cut(s) 438, 794, 1117, 1949
TseFI GTSAC 3 cut(s) 1195, 1265, 1510
TseI GCWGC 4 cut(s) 185, 1462, 2035, 2038
Tsp45I GTSAC 3 cut(s) 1195, 1265, 1510
TspGWI ACGGA 1 cut(s) 815
TspMI CCCGGG 1 cut(s) 1568
TspRI CASTG 4 cut(s) 438, 794, 1117, 1949
VspI ATTAAT 2 cut(s) 890, 995
XapI RAATTY 2 cut(s) 1702, 1973
XceI RCATGY 6 cut(s) 98, 512, 853, 1196, 1229, 1801
XmaI CCCGGG 1 cut(s) 1568
XmiI GTMKAC 3 cut(s) 745, 1951, 1986
XmnI GAANNNNTTC 1 cut(s) 1860
XspI CTAG 6 cut(s) 485, 728, 965, 1100, 1392, 1592
ZrmI AGTACT 1 cut(s) 624
Zsp2I ATGCAT 2 cut(s) 552, 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.