Rorug01G0128000

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
21849254 .. 21852671
3418 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0128000.1

Sequence Viewer

Length: 3033 bp
ATGTTCATTTTCTGTTCTAACTCCTTCATGCAACTAAACCATCCCTTAACCACGAGACTCGAAGGGAATGTGACGGATAGGCTGGCACTACTAGCAATCAAAGCTCAAATACAACACGATCCCAACCAGGTCACAAGCTCATGGAATGAATCCCTTCATTTTTGCCAGTGGCACGGCATCACCTGCAGTCGACAACATGGCCAAAGGGTGACAAAGCTGGAGCTCGGGTCTCTAGCGTTGGTGGGATCCATATCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTCCTCGATCTCCGGAACAATAGCTTCACTCATCCAATTCCTCCTCAAATTGGGCATTTGCATAGATTGCAGGTATTGCTTCTACACAATAACTCACTTACTGGCACCATTCCTGCCAATATATCCAATTGCTTTGAACTCATCACTCTCTTCCTTAGTAGAAACAATCTAGTGGGTAAAATTCCTCCCAAACTGAGTTCCTTGTCAAAGCTTCAGAGTTTTGTTTTGCAATTCGACAATTTAACAGGAGAGATCCCTCCTTCTTTGGGGAACCTTTCGTCTCTCGAGCGGATTGGTTTAGGTTATAACAACTTAGAAGGAAGCATCCCCAGTTCTCTATGCCAGTTGAAAAAATTAACAGTTTTCTCTTTGGCCATAAATAGGTTGTCTGGTATCATCCCTTCATGCATTTATAACCTCTCTGGTATAGTTCAATTCGAGATATTACTAAACCAAATTCAAGGAAGTCTTCCTTCAAACTTGGGCACTAAAGTTTTTCCCAACCTTCAAATCTTTTCCATTGATGAGAATCAATTTACTGGGGCCATCCCTTGGTCAATATCCAATGCAACAAATCTTGTGTGGTTTCAATGTTCATCAAACAAACTCACTGGACAGGTGCCAAATTTACGAAATCTTCATAACCTTGTGGTATTCAATGTCGAAGATAATAATCTTGGAAGCGGTAAACATGGTGACTTGAGTTTTGTCTCAGAATTGATCAATGCCACACAGCTTAGGTGGTTGGACTTCTCAAACAACAATTTTGGAGGGACGTTGCCCACATCAATATCCAATCTCTCAACCAATCTCCAAATGCTTTTTCTTCAAGGAAACCGCCTACAGGGAAGCATCCCAACTGGGTTAGGGAATCTTGTGAACTTGCAAGGACTACGTATGGGTGAAAACAACTTCACAGGTAGCATTCCCACAGATATTGGGAAAGTTTTAAGGCTCGGGAAAATTTATCTTGGGAACAACAAATTATACGGGAGCATTCCGTCTTCTCTTGGAAATTTAACAGAGTTAACCATTCTTGACTTGTCAGGAAATAATCTTAATGGCATCATCCCTTCCAGCCTAGGAGAATGTCACGAGTTGCTAGAGTTGGATCTTTCTCAAAATAACTTAGATGGCAGAATACCTCAACAATTACTTATTGGTCTCCTTGCTTTATCAATTTCTTTAAACTTGTCAAGAAACCAATTTACTGGTTCCCTTCCCGTTGAGATTGGAAAGTTGAAGAATCTAGCTGCCCTCGATTTCTCTTACAACATGTTATCAGGACAACTTCCTAGTAGCCTCGGCAGTTGTGGGAGTTTGGAAGTCCTACACTTACAAAATAACTTTTTGGAAGGGCTCATTCCTTCATCTATGAAGGAATTGAGAGGGATTCGAGATTTAGACCTTTCATTCAATAATTTGTCAGGAGATATTCCAGAGTTTTTCGAGCACTTTGGAAACCTAGAGAATCTAAACCTATCCTTTAATCAATTTTGGGGAGTAGTACCAACAGACGGTGTTTTTAGGAATGCAAGTGCGACTTCAGTTGCTGGAAACACAAGACTCTGCGGCGGTATTGCTAATCTTCGACTTCCTGTGTGCAAGCTTAAAGAGTCTAAAGGAGGAGAATTGTCTCGTAGAATGAAACTGGTGATCTCTTTAGTTTCCGGGTTCACTCTGTTGGGGCTGGCTGTGGTGCTTGCTCTTTTCCTTCTTCGTAAGAAAAGGAAAGAAACTGAATTAAGCACTTTTGAGAACTCTGTTTTGCAAGTTTCATATGCTACTCTTCTAAAAGCTACTGACGGGTTCACTTCAGCTAATTTGATTGGTGTGGGTGCTTTTGGGTCTGTTTACAAAGGAGTTCTTGCGGATGATAGAGTTGTCGCTGTGAAGGTGCTTAACATGTTACACCCGGGAGCATCTAAGAGTTTCATGGCCGAATGTGAGGCGTTGAGAAATATCAAGCATCGGAATCTGGTCAAGATCTTAACTGCATGTTCAAGTATTGATTTCAGCGGTAATGATTTCAAGGCTCTTGTTTACGAGTTCATGGAGAATGGTAGCTTAGAGGATTGGTTGCATCCATCCACCGGAAATGAAGAGCTGATAGAAGCACCCAAAAGTTTAAGTCTTGTTCAGAGGCTCGACATTGCCATTGATATTGCTTGTGCATTGGATTATCTTCACAATCATTGTGAAACACCGATAGTTCATTGTGATCTCAAGCCAAGTAATGTTCTTTTGGACAAAGAGTTGACTGGACATGTTTCTGACTTTGGGCTGGCAAGGTTTCTCTCAGAACCAACCAATGTTTCTAGAAATCAATCAAGCTCCATCGGAATCAGAGGATCAGTTGGTTATGCTGCTCCAGAGTATGGTATGGGAAGTGAAGTTTCAACATATGGGGATGTCTACAGCTTTGGCATTCTCCTGTTAGAAATGTTTACAGGGAAGAAACCCACTGATCACATGTTCACTGATGGCTTCAATCTTCATTATTATGTGAAGACAGCTCTCCCTAAACGTGTTGCAGACATTGCAGATTCATTAATTCTTCAAGGAGGCAACATGAATGTTGAAGAATCTCACAACCTCTCTAGCTTGAGAGCACAGAAAATTGAAGAGTGCTTGACTTTGATATTTGGAATTGGAATTGCCTGTTCGGTTGAATCTCCAACAACCAGAAAGGATATCAGTGATGTTGCACCTGAATTGCACTCAATTAGGGGCAATCTTCTTGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1010

Amino Acids

110.28

Weight (kDa)

6.31

Isoelectric Point (pI)

32.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 25 - 63 1.6e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 84 - 269 2.7e-12 Leucine-rich repeat region
LRR_14 PF23598 291 - 469 1.1e-10 Leucine-rich repeat region
LRR_8 PF13855 414 - 472 6.8e-07 Leucine rich repeat
LRR_14 PF23598 455 - 588 2.1e-08 Leucine-rich repeat region
LRR_8 PF13855 535 - 594 8.7e-09 Leucine rich repeat
Pkinase PF00069 701 - 920 3.4e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 703 - 922 3.5e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 591, 699
AarI CACCTGC 1 cut(s) 191
Acc36I ACCTGC 2 cut(s) 191, 346
AccB1I GGYRCC 2 cut(s) 389, 904
AccB7I CCANNNNNTGG 2 cut(s) 837, 2663
AccBSI CCGCTC 1 cut(s) 574
AccI GTMKAC 2 cut(s) 190, 2700
AccIII TCCGGA 1 cut(s) 297
AciI CCGC 7 cut(s) 574, 969, 1123, 1857, 1860, 2156, 2304
AclWI GGATC 6 cut(s) 113, 240, 253, 532, 1404, 2644
AcoI YGGCCR 3 cut(s) 199, 657, 2223
AcsI RAATTY 5 cut(s) 465, 741, 910, 1248, 1300
AcuI CTGAAG 3 cut(s) 482, 1815, 2085
AfaI GTAC 1 cut(s) 1794
AfiI CCNNNNNNNGG 9 cut(s) 263, 335, 551, 666, 837, 1129, 1802, 2378, 2663
AflII CTTAAG 1 cut(s) 280
AflIII ACRYGT 5 cut(s) 1560, 2190, 2551, 2757, 2812
AjnI CCWGG 1 cut(s) 126
AjuI GAANNNNNNNTTGG 4 cut(s) 1092, 1124, 2584, 2616
Alw21I GWGCWC 3 cut(s) 225, 1740, 2899
Alw26I GTCTC 6 cut(s) 49, 234, 570, 1000, 1454, 1926
AlwI GGATC 6 cut(s) 113, 240, 253, 532, 1404, 2644
AlwNI CAGNNNCTG 1 cut(s) 1838
Ama87I CYCGRG 4 cut(s) 224, 569, 1241, 2200
Aor13HI TCCGGA 1 cut(s) 297
AoxI GGCC 4 cut(s) 199, 657, 828, 2223
ApeKI GCWGC 2 cut(s) 1538, 2651
ApoI RAATTY 5 cut(s) 465, 741, 910, 1248, 1300
ArsI GACNNNNNNTTYG 2 cut(s) 974, 1006
AseI ATTAAT 1 cut(s) 2837
Asp700I GAANNNNTTC 1 cut(s) 153
AspA2I CCTAGG 1 cut(s) 1366
AspS9I GGNCC 1 cut(s) 828
AsuC2I CCSGG 3 cut(s) 1957, 2201, 2202
AsuHPI GGTGA 5 cut(s) 172, 220, 992, 1199, 1951
AvaI CYCGRG 4 cut(s) 224, 569, 1241, 2200
AvrII CCTAGG 1 cut(s) 1366
BaeGI GKGCMC 1 cut(s) 773
BalI TGGCCA 2 cut(s) 201, 659
BamHI GGATCC 1 cut(s) 245
BanI GGYRCC 2 cut(s) 389, 904
BanII GRGCYC 2 cut(s) 225, 1647
BarI GAAGNNNNNNTAC 2 cut(s) 670, 702
BauI CACGAG 2 cut(s) 52, 1379
BbsI GAAGAC 3 cut(s) 746, 1281, 2801
Bbv12I GWGCWC 3 cut(s) 225, 1740, 2899
BbvI GCAGC 2 cut(s) 1525, 2638
BccI CCATC 6 cut(s) 48, 839, 1412, 2380, 2630, 2762
BceAI ACGGC 1 cut(s) 190
BciT130I CCWGG 1 cut(s) 128
BclI TGATCA 2 cut(s) 1005, 2752
BcnI CCSGG 3 cut(s) 1957, 2201, 2202
BcoDI GTCTC 6 cut(s) 49, 234, 570, 1000, 1454, 1926
BfmI CTRYAG 3 cut(s) 184, 1127, 2701
BfrI CTTAAG 1 cut(s) 280
BfuAI ACCTGC 2 cut(s) 191, 346
BglII AGATCT 1 cut(s) 2271
BisI GCNGC 3 cut(s) 1539, 1858, 2652
BlnI CCTAGG 1 cut(s) 1366
BlsI GCNGC 3 cut(s) 1540, 1859, 2653
Bme1390I CCNGG 4 cut(s) 128, 1957, 2201, 2202
BmeT110I CYCGRG 4 cut(s) 224, 569, 1241, 2200
BmgT120I GGNCC 1 cut(s) 828
BmiI GGNNCC 6 cut(s) 247, 391, 557, 829, 906, 1501
BmrFI CCNGG 4 cut(s) 128, 1957, 2201, 2202
BmrI ACTGGG 3 cut(s) 609, 834, 1155
BmsI GCATC 7 cut(s) 186, 618, 1146, 1359, 2216, 2263, 2377
BmuI ACTGGG 3 cut(s) 609, 834, 1155
BpiI GAAGAC 3 cut(s) 746, 1281, 2801
BpmI CTGGAG 2 cut(s) 239, 2640
Bpu10I CCTNAGC 1 cut(s) 1022
BpuEI CTTGAG 3 cut(s) 1006, 2495, 2911
BpuMI CCSGG 3 cut(s) 1957, 2201, 2202
BsaAI YACGTR 1 cut(s) 1181
BsaBI GATNNNNATC 3 cut(s) 250, 813, 957
BsaI GGTCTC 2 cut(s) 234, 1454
BsaJI CCNNGG 4 cut(s) 836, 1366, 1588, 2200
BsaWI WCCGGW 2 cut(s) 297, 2378
BsaXI ACNNNNNCTCC 2 cut(s) 212, 242
Bsc4I CCNNNNNNNGG 9 cut(s) 263, 335, 551, 666, 837, 1129, 1802, 2378, 2663
Bse3DI GCAATG 2 cut(s) 2436, 2823
Bse8I GATNNNNATC 3 cut(s) 250, 813, 957
BseAI TCCGGA 1 cut(s) 297
BseBI CCWGG 1 cut(s) 128
BseDI CCNNGG 4 cut(s) 836, 1366, 1588, 2200
BseJI GATNNNNATC 3 cut(s) 250, 813, 957
BseLI CCNNNNNNNGG 9 cut(s) 263, 335, 551, 666, 837, 1129, 1802, 2378, 2663
BseMI GCAATG 2 cut(s) 2436, 2823
BseMII CTCAG 3 cut(s) 470, 1011, 2598
BseRI GAGGAG 2 cut(s) 318, 1926
BseSI GKGCMC 1 cut(s) 773
BseXI GCAGC 2 cut(s) 1525, 2638
BshFI GGCC 4 cut(s) 201, 659, 830, 2225
BshNI GGYRCC 2 cut(s) 389, 904
BsiHKAI GWGCWC 3 cut(s) 225, 1740, 2899
BsiHKCI CYCGRG 4 cut(s) 224, 569, 1241, 2200
BsiSI CCGG 4 cut(s) 298, 1956, 2201, 2379
BslFI GGGAC 1 cut(s) 1072
BslI CCNNNNNNNGG 9 cut(s) 263, 335, 551, 666, 837, 1129, 1802, 2378, 2663
BsmAI GTCTC 6 cut(s) 49, 234, 570, 1000, 1454, 1926
BsmBI CGTCTC 1 cut(s) 570
BsmFI GGGAC 1 cut(s) 1072
BsmI GAATGC 4 cut(s) 1209, 1281, 1822, 2712
BsnI GGCC 4 cut(s) 201, 659, 830, 2225
Bso31I GGTCTC 2 cut(s) 234, 1454
BsoBI CYCGRG 4 cut(s) 224, 569, 1241, 2200
Bsp1286I GDGCHC 5 cut(s) 225, 773, 1647, 1740, 2899
Bsp13I TCCGGA 1 cut(s) 297
BspACI CCGC 7 cut(s) 574, 969, 1123, 1857, 1860, 2156, 2304
BspANI GGCC 4 cut(s) 201, 659, 830, 2225
BspCNI CTCAG 3 cut(s) 471, 1010, 2597
BspEI TCCGGA 1 cut(s) 297
BspLI GGNNCC 6 cut(s) 247, 391, 557, 829, 906, 1501
BspMAI CTGCAG 1 cut(s) 188
BspMI ACCTGC 2 cut(s) 191, 346
BspPI GGATC 6 cut(s) 113, 240, 253, 532, 1404, 2644
BspQI GCTCTTC 1 cut(s) 2382
BspT107I GGYRCC 2 cut(s) 389, 904
BspTI CTTAAG 1 cut(s) 280
BspTNI GGTCTC 2 cut(s) 234, 1454
BsrBI CCGCTC 1 cut(s) 574
BsrDI GCAATG 2 cut(s) 2436, 2823
BssECI CCNNGG 4 cut(s) 836, 1366, 1588, 2200
BssSI CACGAG 2 cut(s) 52, 1379
BssT1I CCWWGG 2 cut(s) 836, 1366
Bst2BI CACGAG 2 cut(s) 52, 1379
Bst2UI CCWGG 1 cut(s) 128
Bst4CI ACNGT 2 cut(s) 646, 1805
Bst6I CTCTTC 4 cut(s) 440, 2079, 2382, 2904
BstAFI CTTAAG 1 cut(s) 280
BstAPI GCANNNNNTGC 4 cut(s) 183, 352, 361, 2825
BstBAI YACGTR 1 cut(s) 1181
BstC8I GCNNGC 5 cut(s) 84, 1892, 1977, 1989, 2571
BstMAI GTCTC 6 cut(s) 49, 234, 570, 1000, 1454, 1926
BstMWI GCNNNNNNNGC 6 cut(s) 92, 101, 183, 352, 361, 2825
BstNI CCWGG 1 cut(s) 128
BstNSI RCATGY 5 cut(s) 1564, 2194, 2286, 2555, 2761
BstSCI CCNGG 4 cut(s) 126, 1955, 2199, 2200
BstSFI CTRYAG 3 cut(s) 184, 1127, 2701
BstSLI GKGCMC 1 cut(s) 773
BstSNI TACGTA 1 cut(s) 1181
BstV1I GCAGC 2 cut(s) 1525, 2638
BstV2I GAAGAC 3 cut(s) 746, 1281, 2801
BstX2I RGATCY 4 cut(s) 245, 537, 1396, 2271
BstXI CCANNNNNNTGG 1 cut(s) 1496
BstYI RGATCY 4 cut(s) 245, 537, 1396, 2271
BsuRI GGCC 4 cut(s) 201, 659, 830, 2225
BtsIMutI CAGTG 5 cut(s) 173, 894, 2748, 2763, 2989
BveI ACCTGC 2 cut(s) 191, 346
Cac8I GCNNGC 5 cut(s) 84, 1892, 1977, 1989, 2571
CaiI CAGNNNCTG 1 cut(s) 1838
Cfr13I GGNCC 1 cut(s) 828
Cfr9I CCCGGG 1 cut(s) 2200
CsiI ACCWGGT 1 cut(s) 126
Csp6I GTAC 1 cut(s) 1793
CspCI CAANNNNNGTGG 2 cut(s) 1204, 1239
CviQI GTAC 1 cut(s) 1793
DraI TTTAAA 1 cut(s) 1473
EaeI YGGCCR 3 cut(s) 199, 657, 2223
Eam1104I CTCTTC 4 cut(s) 440, 2079, 2382, 2904
EarI CTCTTC 4 cut(s) 440, 2079, 2382, 2904
Ecl136II GAGCTC 1 cut(s) 223
Eco105I TACGTA 1 cut(s) 1181
Eco130I CCWWGG 2 cut(s) 836, 1366
Eco24I GRGCYC 2 cut(s) 225, 1647
Eco31I GGTCTC 2 cut(s) 234, 1454
Eco32I GATATC 1 cut(s) 2980
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 3 cut(s) 482, 1815, 2085
Eco88I CYCGRG 4 cut(s) 224, 569, 1241, 2200
EcoICRI GAGCTC 1 cut(s) 223
EcoRII CCWGG 1 cut(s) 126
EcoRV GATATC 1 cut(s) 2980
EcoT14I CCWWGG 2 cut(s) 836, 1366
EcoT22I ATGCAT 1 cut(s) 695
EcoT38I GRGCYC 2 cut(s) 225, 1647
ErhI CCWWGG 2 cut(s) 836, 1366
Esp3I CGTCTC 1 cut(s) 570
FalI AAGNNNNNCTT 8 cut(s) 738, 770, 742, 774, 1813, 1845, 2136, 2168
FaqI GGGAC 1 cut(s) 1072
FauNDI CATATG 2 cut(s) 2065, 2689
FbaI TGATCA 2 cut(s) 1005, 2752
FblI GTMKAC 2 cut(s) 190, 2700
Fnu4HI GCNGC 3 cut(s) 1539, 1858, 2652
FriOI GRGCYC 2 cut(s) 225, 1647
Fsp4HI GCNGC 3 cut(s) 1539, 1858, 2652
GluI GCNGC 3 cut(s) 1539, 1858, 2652
GsuI CTGGAG 2 cut(s) 239, 2640
HaeIII GGCC 4 cut(s) 201, 659, 830, 2225
HapII CCGG 4 cut(s) 298, 1956, 2201, 2379
HincII GTYRAC 3 cut(s) 191, 1314, 2544
HindII GTYRAC 3 cut(s) 191, 1314, 2544
HindIII AAGCTT 3 cut(s) 274, 494, 1892
HpaI GTTAAC 1 cut(s) 1314
HpaII CCGG 4 cut(s) 298, 1956, 2201, 2379
HphI GGTGA 5 cut(s) 172, 220, 992, 1199, 1951
Hpy188I TCNGA 8 cut(s) 501, 1000, 2259, 2427, 2560, 2587, 2627, 2633
HpyCH4III ACNGT 2 cut(s) 646, 1805
HpyCH4IV ACGT 3 cut(s) 1061, 1180, 2812
HpyF10VI GCNNNNNNNGC 6 cut(s) 92, 101, 183, 352, 361, 2825
HpySE526I ACGT 3 cut(s) 1061, 1180, 2812
Kpn2I TCCGGA 1 cut(s) 297
Ksp22I TGATCA 2 cut(s) 1005, 2752
KspAI GTTAAC 1 cut(s) 1314
LguI GCTCTTC 1 cut(s) 2382
LmnI GCTCC 5 cut(s) 220, 1278, 2204, 2624, 2659
Lsp1109I GCAGC 2 cut(s) 1525, 2638
LweI GCATC 7 cut(s) 186, 618, 1146, 1359, 2216, 2263, 2377
MabI ACCWGGT 1 cut(s) 126
MaeII ACGT 3 cut(s) 1061, 1180, 2812
MaeIII GTNAC 6 cut(s) 70, 130, 208, 980, 1376, 2193
MbiI CCGCTC 1 cut(s) 574
MfeI CAATTG 1 cut(s) 412
MflI RGATCY 4 cut(s) 245, 537, 1396, 2271
MhlI GDGCHC 5 cut(s) 225, 773, 1647, 1740, 2899
MlsI TGGCCA 2 cut(s) 201, 659
MluNI TGGCCA 2 cut(s) 201, 659
MlyI GAGTC 4 cut(s) 51, 294, 1845, 1910
MmeI TCCRAC 3 cut(s) 1011, 1374, 2987
Mox20I TGGCCA 2 cut(s) 201, 659
Mph1103I ATGCAT 1 cut(s) 695
MroI TCCGGA 1 cut(s) 297
MroXI GAANNNNTTC 1 cut(s) 153
MscI TGGCCA 2 cut(s) 201, 659
MslI CAYNNNNRTG 1 cut(s) 2787
Msp20I TGGCCA 2 cut(s) 201, 659
MspA1I CMGCKG 1 cut(s) 2304
MspCI CTTAAG 1 cut(s) 280
MspI CCGG 4 cut(s) 298, 1956, 2201, 2379
MspR9I CCNGG 4 cut(s) 128, 1957, 2201, 2202
MunI CAATTG 1 cut(s) 412
Mva1269I GAATGC 4 cut(s) 1209, 1281, 1822, 2712
MvaI CCWGG 1 cut(s) 128
MwoI GCNNNNNNNGC 6 cut(s) 92, 101, 183, 352, 361, 2825
NciI CCSGG 3 cut(s) 1957, 2201, 2202
NdeI CATATG 2 cut(s) 2065, 2689
NlaIV GGNNCC 6 cut(s) 247, 391, 557, 829, 906, 1501
NmeAIII GCCGAG 1 cut(s) 1569
NmuCI GTSAC 5 cut(s) 70, 130, 208, 980, 1376
NsiI ATGCAT 1 cut(s) 695
NspI RCATGY 5 cut(s) 1564, 2194, 2286, 2555, 2761
PaeR7I CTCGAG 1 cut(s) 569
PaqCI CACCTGC 1 cut(s) 191
PciI ACATGT 4 cut(s) 1560, 2190, 2551, 2757
PciSI GCTCTTC 1 cut(s) 2382
PctI GAATGC 4 cut(s) 1209, 1281, 1822, 2712
PdmI GAANNNNTTC 1 cut(s) 153
PflMI CCANNNNNTGG 2 cut(s) 837, 2663
PkrI GCNGC 3 cut(s) 1540, 1859, 2653
PleI GAGTC 4 cut(s) 51, 293, 1845, 1909
PpsI GAGTC 4 cut(s) 51, 293, 1845, 1909
Ppu21I YACGTR 1 cut(s) 1181
PscI ACATGT 4 cut(s) 1560, 2190, 2551, 2757
PshBI ATTAAT 1 cut(s) 2837
PsiI TTATAA 2 cut(s) 591, 699
Psp124BI GAGCTC 1 cut(s) 225
Psp6I CCWGG 1 cut(s) 126
PspGI CCWGG 1 cut(s) 126
PspN4I GGNNCC 6 cut(s) 247, 391, 557, 829, 906, 1501
PspPI GGNCC 1 cut(s) 828
PstI CTGCAG 1 cut(s) 188
PstNI CAGNNNCTG 1 cut(s) 1838
PsuI RGATCY 4 cut(s) 245, 537, 1396, 2271
RsaI GTAC 1 cut(s) 1794
RsaNI GTAC 1 cut(s) 1793
RseI CAYNNNNRTG 1 cut(s) 2787
SacI GAGCTC 1 cut(s) 225
SalI GTCGAC 1 cut(s) 189
SapI GCTCTTC 1 cut(s) 2382
SatI GCNGC 3 cut(s) 1539, 1858, 2652
Sau96I GGNCC 1 cut(s) 828
SchI GAGTC 4 cut(s) 51, 294, 1845, 1910
ScrFI CCNGG 4 cut(s) 128, 1957, 2201, 2202
SduI GDGCHC 5 cut(s) 225, 773, 1647, 1740, 2899
SexAI ACCWGGT 1 cut(s) 126
SfaNI GCATC 7 cut(s) 186, 618, 1146, 1359, 2216, 2263, 2377
SfcI CTRYAG 3 cut(s) 184, 1127, 2701
Sfr274I CTCGAG 1 cut(s) 569
SlaI CTCGAG 1 cut(s) 569
SmaI CCCGGG 1 cut(s) 2202
SmiMI CAYNNNNRTG 1 cut(s) 2787
SmlI CTYRAG 5 cut(s) 280, 569, 985, 2510, 2890
SmoI CTYRAG 5 cut(s) 280, 569, 985, 2510, 2890
SnaBI TACGTA 1 cut(s) 1181
SsiI CCGC 7 cut(s) 574, 969, 1123, 1857, 1860, 2156, 2304
SstI GAGCTC 1 cut(s) 225
StyD4I CCNGG 4 cut(s) 126, 1955, 2199, 2200
StyI CCWWGG 2 cut(s) 836, 1366
TaaI ACNGT 2 cut(s) 646, 1805
TaiI ACGT 3 cut(s) 1064, 1183, 2815
TauI GCSGC 1 cut(s) 1860
TscAI CASTG 5 cut(s) 173, 901, 2755, 2770, 2989
TseFI GTSAC 5 cut(s) 70, 130, 208, 980, 1376
TseI GCWGC 2 cut(s) 1538, 2651
Tsp45I GTSAC 5 cut(s) 70, 130, 208, 980, 1376
TspGWI ACGGA 2 cut(s) 89, 1275
TspMI CCCGGG 1 cut(s) 2200
TspRI CASTG 5 cut(s) 173, 901, 2755, 2770, 2989
Van91I CCANNNNNTGG 2 cut(s) 837, 2663
Vha464I CTTAAG 1 cut(s) 280
VspI ATTAAT 1 cut(s) 2837
XapI RAATTY 5 cut(s) 465, 741, 910, 1248, 1300
XbaI TCTAGA 1 cut(s) 2603
XceI RCATGY 5 cut(s) 1564, 2194, 2286, 2555, 2761
XhoI CTCGAG 1 cut(s) 569
XmaI CCCGGG 1 cut(s) 2200
XmaJI CCTAGG 1 cut(s) 1366
XmiI GTMKAC 2 cut(s) 190, 2700
XmnI GAANNNNTTC 1 cut(s) 153
Zsp2I ATGCAT 1 cut(s) 695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.